View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20215_high_2 (Length: 471)

Name: NF20215_high_2
Description: NF20215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20215_high_2
NF20215_high_2
[»] chr2 (47 HSPs)
chr2 (57-430)||(25544331-25544706)
chr2 (198-280)||(11307984-11308065)
chr2 (208-282)||(23354630-23354704)
chr2 (200-277)||(30563408-30563485)
chr2 (208-264)||(24011043-24011099)
chr2 (199-262)||(10535757-10535820)
chr2 (208-260)||(12748691-12748743)
chr2 (208-254)||(34006997-34007043)
chr2 (199-264)||(19573976-19574041)
chr2 (208-281)||(23354974-23355047)
chr2 (208-253)||(18570979-18571024)
chr2 (201-246)||(22085004-22085049)
chr2 (208-254)||(4229414-4229460)
chr2 (208-270)||(38919213-38919275)
chr2 (209-254)||(12668429-12668474)
chr2 (209-254)||(18889597-18889642)
chr2 (199-264)||(37986777-37986842)
chr2 (218-262)||(30394474-30394518)
chr2 (194-238)||(42418862-42418906)
chr2 (215-254)||(8300225-8300264)
chr2 (209-252)||(21616770-21616813)
chr2 (208-247)||(31026702-31026741)
chr2 (208-243)||(40681989-40682024)
chr2 (208-254)||(6249206-6249252)
chr2 (209-243)||(21782835-21782869)
chr2 (196-254)||(23718021-23718079)
chr2 (209-243)||(23921261-23921295)
chr2 (196-254)||(24105693-24105751)
chr2 (208-246)||(30298461-30298499)
chr2 (209-247)||(36281693-36281731)
chr2 (196-254)||(42832282-42832340)
chr2 (209-254)||(5367200-5367245)
chr2 (208-264)||(6698455-6698512)
chr2 (208-253)||(23406875-23406920)
chr2 (209-254)||(29970555-29970600)
chr2 (209-254)||(37411250-37411295)
chr2 (209-254)||(44860328-44860373)
chr2 (213-254)||(45000852-45000893)
chr2 (209-241)||(2331802-2331834)
chr2 (211-247)||(17520083-17520119)
chr2 (208-252)||(19613621-19613665)
chr2 (292-336)||(19980750-19980794)
chr2 (427-455)||(25544799-25544827)
chr2 (209-249)||(25846749-25846789)
chr2 (209-265)||(28677917-28677973)
chr2 (199-243)||(30404867-30404911)
chr2 (209-253)||(35449521-35449565)
[»] chr4 (65 HSPs)
chr4 (199-280)||(20743258-20743339)
chr4 (200-279)||(31243529-31243608)
chr4 (199-264)||(24343505-24343570)
chr4 (194-266)||(3144646-3144718)
chr4 (212-338)||(17876166-17876287)
chr4 (198-261)||(32910548-32910611)
chr4 (210-280)||(6273953-6274023)
chr4 (199-250)||(7012064-7012115)
chr4 (195-253)||(18513248-18513306)
chr4 (199-260)||(16402211-16402272)
chr4 (208-257)||(19230312-19230361)
chr4 (200-253)||(34515881-34515934)
chr4 (195-252)||(47191001-47191058)
chr4 (208-261)||(53968553-53968606)
chr4 (208-252)||(5654599-5654643)
chr4 (208-263)||(30520433-30520489)
chr4 (208-247)||(10546155-10546194)
chr4 (208-254)||(14465300-14465346)
chr4 (201-247)||(43299984-43300030)
chr4 (201-247)||(43300616-43300662)
chr4 (210-252)||(46180944-46180986)
chr4 (209-258)||(22440602-22440651)
chr4 (208-264)||(34589704-34589758)
chr4 (194-254)||(7727965-7728025)
chr4 (208-264)||(8820415-8820471)
chr4 (210-254)||(11110212-11110256)
chr4 (196-252)||(25950552-25950607)
chr4 (208-252)||(36386219-36386263)
chr4 (199-255)||(46971904-46971960)
chr4 (210-250)||(49659533-49659573)
chr4 (208-252)||(50848311-50848355)
chr4 (213-260)||(683064-683111)
chr4 (299-338)||(19482761-19482800)
chr4 (221-264)||(23386166-23386209)
chr4 (209-252)||(36635332-36635375)
chr4 (209-243)||(903930-903964)
chr4 (209-243)||(8423735-8423769)
chr4 (209-243)||(21945511-21945545)
chr4 (300-338)||(22234817-22234855)
chr4 (194-260)||(37203257-37203323)
chr4 (199-245)||(51673457-51673503)
chr4 (211-264)||(944664-944717)
chr4 (209-246)||(2976702-2976739)
chr4 (209-254)||(5775364-5775409)
chr4 (208-264)||(20521847-20521901)
chr4 (301-338)||(20633555-20633592)
chr4 (213-262)||(21732358-21732407)
chr4 (202-243)||(26276026-26276067)
chr4 (208-257)||(29088245-29088294)
chr4 (209-254)||(33950144-33950189)
chr4 (209-254)||(40613458-40613503)
chr4 (209-254)||(54580029-54580074)
chr4 (209-245)||(8457933-8457969)
chr4 (195-243)||(9996834-9996882)
chr4 (292-336)||(12895214-12895258)
chr4 (195-243)||(29205438-29205486)
chr4 (210-254)||(30103363-30103406)
chr4 (209-276)||(30982862-30982929)
chr4 (208-252)||(39507127-39507171)
chr4 (210-254)||(40699937-40699981)
chr4 (208-252)||(40783964-40784008)
chr4 (208-236)||(43188619-43188647)
chr4 (208-236)||(48845148-48845176)
chr4 (299-339)||(53381527-53381567)
chr4 (199-264)||(53381592-53381653)
[»] chr7 (45 HSPs)
chr7 (195-270)||(29812654-29812729)
chr7 (200-264)||(23930218-23930282)
chr7 (199-264)||(43249991-43250056)
chr7 (196-264)||(7133274-7133342)
chr7 (191-280)||(22683733-22683824)
chr7 (199-264)||(38804551-38804616)
chr7 (200-260)||(23751899-23751959)
chr7 (199-264)||(4017790-4017855)
chr7 (208-260)||(12278842-12278894)
chr7 (208-264)||(17780080-17780136)
chr7 (208-266)||(5938479-5938537)
chr7 (212-254)||(18233604-18233646)
chr7 (208-254)||(38134412-38134458)
chr7 (208-264)||(10230069-10230125)
chr7 (208-264)||(2525839-2525896)
chr7 (208-253)||(4909158-4909203)
chr7 (200-257)||(13427575-13427632)
chr7 (208-245)||(44172905-44172942)
chr7 (208-252)||(36314635-36314679)
chr7 (210-254)||(41229304-41229348)
chr7 (209-252)||(30813820-30813863)
chr7 (209-243)||(2424622-2424656)
chr7 (196-254)||(20549786-20549844)
chr7 (208-246)||(21247750-21247788)
chr7 (209-243)||(21880160-21880194)
chr7 (208-254)||(23128667-23128713)
chr7 (209-243)||(27945049-27945083)
chr7 (209-243)||(29787386-29787420)
chr7 (209-243)||(32308128-32308162)
chr7 (209-254)||(5835255-5835300)
chr7 (209-254)||(7328697-7328742)
chr7 (194-243)||(16341489-16341538)
chr7 (209-254)||(19992009-19992054)
chr7 (200-253)||(25239710-25239763)
chr7 (209-254)||(27732245-27732290)
chr7 (210-243)||(30731046-30731079)
chr7 (202-261)||(5937419-5937479)
chr7 (299-339)||(9778587-9778627)
chr7 (208-268)||(11591997-11592057)
chr7 (212-252)||(17307904-17307944)
chr7 (209-253)||(17851439-17851483)
chr7 (210-254)||(19930947-19930991)
chr7 (214-254)||(22602716-22602756)
chr7 (209-253)||(22868050-22868094)
chr7 (211-243)||(30730935-30730967)
[»] chr6 (48 HSPs)
chr6 (201-264)||(34446565-34446628)
chr6 (199-263)||(6389741-6389805)
chr6 (196-276)||(30781278-30781358)
chr6 (201-258)||(12235521-12235578)
chr6 (200-260)||(12086345-12086405)
chr6 (208-264)||(17168459-17168515)
chr6 (208-264)||(19602177-19602233)
chr6 (179-253)||(34895041-34895115)
chr6 (199-256)||(6299510-6299567)
chr6 (199-256)||(6306320-6306377)
chr6 (195-252)||(7569176-7569233)
chr6 (195-260)||(13689193-13689258)
chr6 (208-264)||(26247433-26247489)
chr6 (198-278)||(34229451-34229531)
chr6 (211-253)||(9024183-9024225)
chr6 (209-254)||(7265599-7265644)
chr6 (209-254)||(9025500-9025545)
chr6 (209-254)||(9195760-9195805)
chr6 (209-253)||(19040360-19040404)
chr6 (195-243)||(28715289-28715337)
chr6 (210-264)||(9629392-9629447)
chr6 (211-254)||(13364711-13364754)
chr6 (208-254)||(28862128-28862175)
chr6 (209-266)||(1532248-1532308)
chr6 (208-242)||(2140499-2140533)
chr6 (214-252)||(4420187-4420225)
chr6 (212-254)||(10157995-10158037)
chr6 (208-246)||(29049892-29049930)
chr6 (209-243)||(31579242-31579276)
chr6 (208-245)||(4859128-4859165)
chr6 (209-254)||(7086803-7086848)
chr6 (200-249)||(7625121-7625170)
chr6 (209-254)||(9617442-9617487)
chr6 (215-264)||(10031584-10031633)
chr6 (209-254)||(10842540-10842585)
chr6 (213-254)||(11591876-11591917)
chr6 (208-280)||(13211258-13211333)
chr6 (209-254)||(13851744-13851789)
chr6 (201-254)||(19369817-19369870)
chr6 (201-234)||(21385171-21385204)
chr6 (209-254)||(26178687-26178732)
chr6 (213-254)||(26562701-26562742)
chr6 (209-254)||(30866150-30866195)
chr6 (299-336)||(34446653-34446690)
chr6 (199-259)||(2117074-2117134)
chr6 (209-253)||(17341671-17341715)
chr6 (209-276)||(24832596-24832661)
chr6 (208-236)||(29711269-29711297)
[»] chr3 (55 HSPs)
chr3 (208-339)||(52369782-52369909)
chr3 (202-264)||(12704653-12704715)
chr3 (207-258)||(3730167-3730218)
chr3 (183-257)||(34189409-34189483)
chr3 (199-260)||(15864831-15864892)
chr3 (199-260)||(24205041-24205102)
chr3 (199-336)||(25074787-25074914)
chr3 (199-255)||(1830341-1830397)
chr3 (208-264)||(25892467-25892523)
chr3 (208-254)||(20691326-20691372)
chr3 (202-263)||(21211289-21211350)
chr3 (195-260)||(25365456-25365521)
chr3 (208-255)||(21149074-21149121)
chr3 (209-264)||(34307776-34307831)
chr3 (212-270)||(7931588-7931646)
chr3 (199-264)||(14223849-14223914)
chr3 (202-263)||(25652028-25652089)
chr3 (199-259)||(8903430-8903489)
chr3 (287-339)||(14209194-14209246)
chr3 (208-264)||(41319306-41319362)
chr3 (199-242)||(16789668-16789711)
chr3 (213-264)||(21367289-21367340)
chr3 (195-265)||(21861563-21861633)
chr3 (198-260)||(26665133-26665195)
chr3 (208-254)||(40150577-40150623)
chr3 (196-276)||(16192734-16192814)
chr3 (211-264)||(51512179-51512232)
chr3 (208-264)||(27903639-27903695)
chr3 (195-254)||(7928444-7928503)
chr3 (211-254)||(8039216-8039259)
chr3 (195-258)||(12100264-12100326)
chr3 (299-338)||(49651714-49651753)
chr3 (217-247)||(4704305-4704335)
chr3 (196-254)||(8789556-8789614)
chr3 (209-243)||(11251986-11252020)
chr3 (208-254)||(13799511-13799557)
chr3 (212-258)||(20141107-20141153)
chr3 (208-254)||(33006830-33006876)
chr3 (209-254)||(8039841-8039886)
chr3 (209-254)||(8383265-8383310)
chr3 (299-336)||(8903517-8903554)
chr3 (208-245)||(9210840-9210877)
chr3 (209-254)||(10954960-10955005)
chr3 (195-252)||(11313808-11313865)
chr3 (210-243)||(20503474-20503507)
chr3 (208-249)||(28779569-28779610)
chr3 (194-254)||(33548835-33548896)
chr3 (208-264)||(40697853-40697910)
chr3 (199-243)||(9800038-9800082)
chr3 (299-335)||(14216985-14217021)
chr3 (299-335)||(14223114-14223150)
chr3 (209-253)||(32804547-32804591)
chr3 (299-339)||(40052394-40052434)
chr3 (182-234)||(46336195-46336247)
chr3 (209-253)||(49505161-49505205)
[»] chr8 (44 HSPs)
chr8 (188-280)||(13009473-13009565)
chr8 (195-264)||(40063945-40064014)
chr8 (199-264)||(44067514-44067579)
chr8 (196-276)||(13845229-13845309)
chr8 (205-260)||(39820433-39820488)
chr8 (198-260)||(35431140-35431202)
chr8 (200-260)||(1676711-1676771)
chr8 (203-258)||(28883880-28883935)
chr8 (201-260)||(30068028-30068087)
chr8 (208-266)||(14513168-14513226)
chr8 (210-276)||(16869699-16869765)
chr8 (200-257)||(3658146-3658203)
chr8 (209-253)||(3025559-3025603)
chr8 (200-264)||(26915236-26915300)
chr8 (208-263)||(8017493-8017548)
chr8 (209-247)||(12559119-12559157)
chr8 (201-247)||(12985392-12985438)
chr8 (209-247)||(29198492-29198530)
chr8 (209-254)||(34897093-34897138)
chr8 (208-252)||(3508059-3508103)
chr8 (208-280)||(3911117-3911189)
chr8 (213-269)||(26609756-26609812)
chr8 (45-101)||(36162771-36162826)
chr8 (196-243)||(4611529-4611576)
chr8 (208-243)||(34201063-34201098)
chr8 (208-247)||(37225756-37225795)
chr8 (209-243)||(7658471-7658505)
chr8 (209-243)||(13203649-13203683)
chr8 (209-243)||(14134707-14134741)
chr8 (208-254)||(14692467-14692512)
chr8 (209-247)||(18646180-18646218)
chr8 (208-254)||(33382025-33382071)
chr8 (209-254)||(4786344-4786389)
chr8 (209-254)||(11927092-11927137)
chr8 (209-254)||(13844602-13844647)
chr8 (209-254)||(20679401-20679446)
chr8 (209-254)||(31236583-31236628)
chr8 (210-243)||(40332200-40332233)
chr8 (211-243)||(10441213-10441245)
chr8 (196-280)||(18130513-18130596)
chr8 (209-253)||(24362209-24362253)
chr8 (208-276)||(28819198-28819266)
chr8 (299-339)||(29510230-29510270)
chr8 (300-336)||(34127172-34127208)
[»] chr5 (44 HSPs)
chr5 (200-264)||(43554520-43554584)
chr5 (196-278)||(18607079-18607161)
chr5 (194-264)||(39695995-39696065)
chr5 (208-265)||(5467973-5468030)
chr5 (215-264)||(26205756-26205805)
chr5 (209-258)||(31264446-31264495)
chr5 (200-264)||(25863203-25863267)
chr5 (209-261)||(21137697-21137749)
chr5 (199-250)||(42469219-42469270)
chr5 (202-260)||(7997166-7997224)
chr5 (198-247)||(2577193-2577242)
chr5 (201-258)||(18288053-18288110)
chr5 (209-254)||(28588680-28588725)
chr5 (208-254)||(2548394-2548440)
chr5 (208-246)||(4344749-4344787)
chr5 (208-246)||(11596469-11596507)
chr5 (201-243)||(18162055-18162097)
chr5 (208-258)||(18586291-18586340)
chr5 (195-252)||(6471897-6471954)
chr5 (209-254)||(23015995-23016040)
chr5 (209-276)||(3966511-3966578)
chr5 (212-252)||(21194213-21194253)
chr5 (208-252)||(28296335-28296379)
chr5 (195-246)||(2419851-2419902)
chr5 (208-251)||(21577117-21577160)
chr5 (208-243)||(24906318-24906353)
chr5 (208-259)||(37472598-37472649)
chr5 (212-247)||(43208287-43208322)
chr5 (208-254)||(19737488-19737534)
chr5 (209-243)||(27932243-27932277)
chr5 (209-246)||(2039863-2039900)
chr5 (199-264)||(14574046-14574110)
chr5 (209-254)||(30098334-30098379)
chr5 (209-254)||(30502394-30502439)
chr5 (209-254)||(30542737-30542782)
chr5 (209-254)||(36838551-36838596)
chr5 (209-254)||(41091263-41091308)
chr5 (199-243)||(6247620-6247664)
chr5 (299-339)||(6247692-6247732)
chr5 (232-280)||(12594711-12594759)
chr5 (208-252)||(19293431-19293475)
chr5 (211-243)||(19438353-19438385)
chr5 (208-252)||(38749571-38749615)
chr5 (208-236)||(41558707-41558735)
[»] chr1 (53 HSPs)
chr1 (196-264)||(42004943-42005011)
chr1 (195-264)||(40747769-40747838)
chr1 (195-263)||(39101179-39101247)
chr1 (202-264)||(6936396-6936458)
chr1 (201-262)||(21145466-21145528)
chr1 (195-259)||(6573983-6574047)
chr1 (202-258)||(22794080-22794136)
chr1 (194-242)||(23440003-23440051)
chr1 (209-280)||(17831514-17831582)
chr1 (209-254)||(36878469-36878514)
chr1 (195-254)||(11412774-11412833)
chr1 (195-257)||(11634127-11634190)
chr1 (196-254)||(1864886-1864944)
chr1 (208-246)||(3921674-3921712)
chr1 (208-254)||(24176373-24176419)
chr1 (208-242)||(42325567-42325601)
chr1 (209-254)||(20157356-20157401)
chr1 (182-243)||(40258950-40259011)
chr1 (209-253)||(398772-398816)
chr1 (209-253)||(7918218-7918262)
chr1 (208-244)||(11571592-11571628)
chr1 (209-253)||(30847727-30847771)
chr1 (211-254)||(2445880-2445923)
chr1 (209-271)||(10233261-10233324)
chr1 (209-260)||(12443460-12443511)
chr1 (196-243)||(34298431-34298478)
chr1 (211-254)||(44482240-44482283)
chr1 (208-254)||(373054-373100)
chr1 (196-246)||(16812538-16812588)
chr1 (208-254)||(19637775-19637821)
chr1 (209-247)||(21038091-21038129)
chr1 (211-253)||(25361896-25361938)
chr1 (209-243)||(26238129-26238163)
chr1 (209-243)||(31015051-31015085)
chr1 (209-243)||(40181879-40181913)
chr1 (209-254)||(1486715-1486760)
chr1 (196-245)||(17080896-17080945)
chr1 (211-252)||(25098563-25098604)
chr1 (299-336)||(32461393-32461430)
chr1 (213-262)||(33313483-33313532)
chr1 (209-254)||(38075976-38076021)
chr1 (209-254)||(40285660-40285705)
chr1 (209-254)||(44296501-44296545)
chr1 (302-339)||(49872929-49872966)
chr1 (300-340)||(1209836-1209876)
chr1 (209-241)||(2896140-2896172)
chr1 (208-252)||(7988459-7988503)
chr1 (209-276)||(9828052-9828119)
chr1 (213-245)||(14332420-14332452)
chr1 (220-260)||(17705586-17705626)
chr1 (211-243)||(19324572-19324604)
chr1 (209-253)||(34712390-34712434)
chr1 (194-250)||(45660779-45660835)
[»] scaffold0598 (1 HSPs)
scaffold0598 (208-280)||(8033-8105)
[»] scaffold0199 (1 HSPs)
scaffold0199 (200-260)||(1948-2008)
[»] scaffold0007 (1 HSPs)
scaffold0007 (199-334)||(225199-225329)
[»] scaffold0049 (1 HSPs)
scaffold0049 (211-253)||(56932-56974)
[»] scaffold0085 (1 HSPs)
scaffold0085 (208-253)||(26005-26050)
[»] scaffold0044 (1 HSPs)
scaffold0044 (210-254)||(53189-53233)
[»] scaffold0008 (1 HSPs)
scaffold0008 (209-276)||(263356-263423)
[»] scaffold0011 (1 HSPs)
scaffold0011 (207-254)||(240027-240074)
[»] scaffold0020 (1 HSPs)
scaffold0020 (196-254)||(135318-135376)
[»] scaffold0004 (1 HSPs)
scaffold0004 (209-243)||(92815-92849)
[»] scaffold0571 (1 HSPs)
scaffold0571 (208-245)||(7697-7734)
[»] scaffold0123 (1 HSPs)
scaffold0123 (213-254)||(44531-44572)
[»] scaffold0050 (1 HSPs)
scaffold0050 (209-254)||(70286-70331)
[»] scaffold0036 (1 HSPs)
scaffold0036 (209-254)||(9753-9798)
[»] scaffold0778 (1 HSPs)
scaffold0778 (208-256)||(4413-4461)
[»] scaffold0037 (1 HSPs)
scaffold0037 (183-243)||(102887-102947)


Alignment Details
Target: chr2 (Bit Score: 284; Significance: 1e-159; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 57 - 430
Target Start/End: Original strand, 25544331 - 25544706
Alignment:
Q  57 ggggaagacttttgatagcattctcaatcaggtagtagatccgtttctttctctccattaatagacagagattattgcatttgcatctctctgaattctc 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25544331 ggggaagacttttgatagcattctcaatcaggtagtagatccgtttctttctctccattaatagacagagattgttgcatttgcatctctctgaattctc 25544430  T
Q  157 actatttcagatgatgcggttctatgctattaagcac------cgacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggt 250  Q
    |||||||||||||| ||||||||||||||||||||||      |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25544431 actatttcagatgaggcggttctatgctattaagcacggacaccgacaccgacacgtataataatttgagaaaatgatataattcagtgtaatcataggt 25544530  T
Q  251 gtcgtgtcggtgtcagtgtcagacaccgaccgatgtgtgttcgacatggggacacacctaatccaagaagtgttcgtgcttcataggttctatgtgattg 350  Q
    ||||||||||||||||||||||||||| ||    |||||| ||||||||  ||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  25544531 gtcgtgtcggtgtcagtgtcagacaccaac----gtgtgtccgacatggatacacacctaatccaaaaagtgtccgtggttcataggttctatgtgattg 25544626  T
Q  351 taaaataaagatcatgatttattaggagaaagaataagtgctgaaaaacaaattattgtttttatgcttttctgttcttg 430  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  25544627 taaaataaaggtcatgatttattaagagaaagaataagtgctgaaaaacaaattattgttttaatacttttctgttcttg 25544706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 198 - 280
Target Start/End: Complemental strand, 11308065 - 11307984
Alignment:
Q  198 accgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacaccgac 280  Q
    ||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||    
T  11308065 accgacacggata-taatttgaaaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcggtgttggacaccgac 11307984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 23354704 - 23354630
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacaccgaccg 282  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| | ||| |||||||||||    
T  23354704 ataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtcggggtcggacaccgaccg 23354630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 200 - 277
Target Start/End: Original strand, 30563408 - 30563485
Alignment:
Q  200 cgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacacc 277  Q
    ||||||| ||||||||||||||||||||||||||||| |||||  |||||||| ||||||||||||||||| ||||||    
T  30563408 cgacacggataataatttgagaaaatgacataattcaatgtaactataggtgttgtgtcggtgtcagtgtcggacacc 30563485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 24011043 - 24011099
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  24011043 ataataatttgagaaaatgacataatttagtgtaatcataggtgtcgcgtcggtgtc 24011099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 199 - 262
Target Start/End: Complemental strand, 10535820 - 10535757
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtg 262  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  10535820 ccgacaccgataataatttgagaaaatgacataattcagtgtaatcataagtgtcgtgttggtg 10535757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 260
Target Start/End: Original strand, 12748691 - 12748743
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcgg 260  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  12748691 ataataatttgagaaaatgacatagttcagtgtaatcataggtgttgtgtcgg 12748743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 34007043 - 34006997
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  34007043 ataataatttgagaaattgacataattcagtgtaatcataggtgtcg 34006997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 19573976 - 19574041
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||  |||||||||| ||||||| ||||||||||||||||| ||||||| ||||||||||||    
T  19573976 ccgacaccgataataatttaagaaaataacataattcagtgtaattataggtggcgtgtcggtgtc 19574041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 23355047 - 23354974
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacaccgacc 281  Q
    |||||||||||||||||||| |||||| |||| ||||||||||||| |||||||||| | ||  ||||||||||    
T  23355047 ataataatttgagaaaatgatataatttagtgcaatcataggtgtcatgtcggtgtcggggttggacaccgacc 23354974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 18570979 - 18571024
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||    
T  18570979 ataataatttgagaaaatgacataattcaatgtaatcatatgtgtc 18571024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 22085004 - 22085049
Alignment:
Q  201 gacacgtataataatttgagaaaatgacataattcagtgtaatcat 246  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||    
T  22085004 gacacgtataataatttaagaaaatgacataatttagtgtaatcat 22085049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 4229460 - 4229414
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||| ||| ||||||||||||||||||||||||| ||||||    
T  4229460 ataataatttaagagaatgacataattcagtgtaatcatatgtgtcg 4229414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 38919213 - 38919275
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtc 270  Q
    |||||||||||||||||||  ||| || ||||||||||||||||||||||  ||||| |||||    
T  38919213 ataataatttgagaaaatgttatagtttagtgtaatcataggtgtcgtgttagtgtcggtgtc 38919275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 12668474 - 12668429
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  12668474 taataatttgaaaaaatgacataattcagtgtaattataagtgtcg 12668429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 18889642 - 18889597
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||| |||||||||| ||||||||||||||||||||| ||||||    
T  18889642 taataaattgagaaaatcacataattcagtgtaatcatatgtgtcg 18889597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 37986777 - 37986842
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||  |||||||||||| ||||||| ||| || ||||||||||||||| |||||| ||||||    
T  37986777 ccgacacagataataatttgaaaaaatgatatatttgagtgtaatcataggtatcgtgttggtgtc 37986842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 30394474 - 30394518
Alignment:
Q  218 gagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtg 262  Q
    ||||||||||||||||||||| |||||||||||||| ||| ||||    
T  30394474 gagaaaatgacataattcagtataatcataggtgtcctgttggtg 30394518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 42418862 - 42418906
Alignment:
Q  194 cgacaccgacacgtataataatttgagaaaatgacataattcagt 238  Q
    |||||| ||||||||||| ||||||| ||||||||||||||||||    
T  42418862 cgacacagacacgtataaaaatttgaaaaaatgacataattcagt 42418906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 254
Target Start/End: Complemental strand, 8300264 - 8300225
Alignment:
Q  215 tttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  8300264 tttgagaaaatgacataatttagtgtaatcataagtgtcg 8300225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 21616770 - 21616813
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||    
T  21616770 taataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 247
Target Start/End: Original strand, 31026702 - 31026741
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcata 247  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  31026702 ataataatttaagaaaatgacataattcaatgtaatcata 31026741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 243
Target Start/End: Original strand, 40681989 - 40682024
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||||||||||||||| ||||||    
T  40681989 ataataatttgagaaaatgacataattcaatgtaat 40682024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 6249206 - 6249252
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||||   ||||||||||||| ||||||||||||    
T  6249206 ataataatttgagaaaatattataattcagtgtattcataggtgtcg 6249252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Complemental strand, 21782869 - 21782835
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||| |||||||||||||||||    
T  21782869 taataatttgagaaaatcacataattcagtgtaat 21782835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 23718021 - 23718079
Alignment:
Q  196 acaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||   ||||||||||||||| | ||||||||||||||||| ||| ||||||    
T  23718021 acaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 23718079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 23921261 - 23921295
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||| |||||||||||||||||    
T  23921261 taataatttgagaaaattacataattcagtgtaat 23921295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 24105693 - 24105751
Alignment:
Q  196 acaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||   ||||||||||||||| | ||||||||||||||||| ||| ||||||    
T  24105693 acaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 24105751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 30298499 - 30298461
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcat 246  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  30298499 ataataatttaataaaatgacataattcagtgtaatcat 30298461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 247
Target Start/End: Original strand, 36281693 - 36281731
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcata 247  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  36281693 taataatttgagaaaatcacataatttagtgtaatcata 36281731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 42832340 - 42832282
Alignment:
Q  196 acaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||   ||||||||||||||||| ||||| ||||||||||| ||| ||||||    
T  42832340 acaccgacaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcg 42832282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 5367200 - 5367245
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||| |||| ||||||||||||||||| ||| ||||||    
T  5367200 taataatttgaggaaatcacataattcagtgtaattatatgtgtcg 5367245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 6698512 - 6698455
Alignment:
Q  208 ataataatttgagaaaa-tgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||||||| |||| ||| ||||||||||||||||||| ||||||| | ||||||    
T  6698512 ataataatttgaaaaaagtgaaataattcagtgtaatcatacgtgtcgtattggtgtc 6698455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 23406875 - 23406920
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    |||||||||| ||||||| |||||||||||  ||||||||||||||    
T  23406875 ataataatttaagaaaattacataattcagaataatcataggtgtc 23406920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 29970600 - 29970555
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||||||||  |||| ||||||||||||||| ||||||    
T  29970600 taataatttgagaaaatcgcatagttcagtgtaatcatatgtgtcg 29970555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 37411295 - 37411250
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| |||||||||||||| || ||| ||||||    
T  37411295 taataatttgagaaaatcacataattcagtgtgattatatgtgtcg 37411250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 44860328 - 44860373
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||||||||  |||||||||||||||| ||| ||||||    
T  44860328 taataatttgagaaaatcgcataattcagtgtaattatatgtgtcg 44860373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 45000893 - 45000852
Alignment:
Q  213 aatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| |||||| |||||||||| ||||||    
T  45000893 aatttgagaaaatgacacaattcaatgtaatcatatgtgtcg 45000852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 2331802 - 2331834
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgta 241  Q
    ||||||||||||||||| |||||||||||||||    
T  2331802 taataatttgagaaaatcacataattcagtgta 2331834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 247
Target Start/End: Complemental strand, 17520119 - 17520083
Alignment:
Q  211 ataatttgagaaaatgacataattcagtgtaatcata 247  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  17520119 ataatttaagaaaatcacataattcagtgtaatcata 17520083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 252
Target Start/End: Complemental strand, 19613665 - 19613621
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    |||||||||||||||||| |||||||||| |||||| ||| ||||    
T  19613665 ataataatttgagaaaataacataattcaatgtaatgatatgtgt 19613621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 19980750 - 19980794
Alignment:
Q  292 cgacatggggacacacctaatccaagaagtgttcgtgcttcatag 336  Q
    |||||| | |||||||||||||| |||||||||| ||||||||||    
T  19980750 cgacatcgagacacacctaatccgagaagtgttcatgcttcatag 19980794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 427 - 455
Target Start/End: Original strand, 25544799 - 25544827
Alignment:
Q  427 cttgtgattttggcataaatcctgttttt 455  Q
    |||||||||||||||||||||||||||||    
T  25544799 cttgtgattttggcataaatcctgttttt 25544827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 25846749 - 25846789
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcatagg 249  Q
    ||||||||||||||||| |||| |||||||||||| |||||    
T  25846749 taataatttgagaaaatcacatgattcagtgtaattatagg 25846789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 28677917 - 28677973
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtca 265  Q
    ||||||||||| ||||| ||||||||||||||||| ||| ||   ||||||||||||    
T  28677917 taataatttgaaaaaatcacataattcagtgtaattatatgttcggtgtcggtgtca 28677973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 30404911 - 30404867
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||  ||||||||||| ||||| |||||||||||||||||    
T  30404911 ccgacacggttaataatttgaaaaaatcacataattcagtgtaat 30404867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 35449521 - 35449565
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    ||||||||||||||||| ||| ||||||||||||| ||| |||||    
T  35449521 taataatttgagaaaatcacagaattcagtgtaattatatgtgtc 35449565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 5e-29; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 199 - 280
Target Start/End: Complemental strand, 20743339 - 20743258
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacaccgac 280  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||    
T  20743339 ccgacacggataataatttgagaaaatgacataattcagtgtaatcataggtgttgtgtcggtgtcgatgtcagacaccgac 20743258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 31243608 - 31243529
Alignment:
Q  200 cgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacaccga 279  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||| ||||||||    
T  31243608 cgacacttataataatttgagaaaatgacataattcagtgtaatcataggtgtcatgtcggtgttggtgtcggacaccga 31243529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 24343505 - 24343570
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  24343505 ccgacacggataataatttgagaaaattacataattcagtgtaattataggtgtcgtgtcggtgtc 24343570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 3144718 - 3144646
Alignment:
Q  194 cgacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcag 266  Q
    ||||||| ||||| |||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  3144718 cgacacctacacggataataatttcagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtcag 3144646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 212 - 338
Target Start/End: Original strand, 17876166 - 17876287
Alignment:
Q  212 taatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacaccgaccgatgtgtgttcgacatggggacacacctaa 311  Q
    |||||| |||||||||||||||| |||||||||||| ||| |||||| ||||| |||||||||||||||    |  ||| |||||   ||||||||||||    
T  17876166 taattttagaaaatgacataatttagtgtaatcatatgtgccgtgtcagtgtc-gtgtcagacaccgac----gcttgtccgacaccaggacacacctaa 17876260  T
Q  312 tccaagaagtgttcgtgcttcataggt 338  Q
    |||||| |||||  |||||||||||||    
T  17876261 tccaaggagtgtctgtgcttcataggt 17876287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 198 - 261
Target Start/End: Original strand, 32910548 - 32910611
Alignment:
Q  198 accgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggt 261  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| || |||||  |||||||    
T  32910548 accgacacggataataatttgagaaaatgacataattcagtgtaattatgggtgttatgtcggt 32910611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 6273953 - 6274023
Alignment:
Q  210 aataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacaccgac 280  Q
    |||||||||||||||||| |||||| |||||||| ||||  |||||||||||||| |||||||||| ||||    
T  6273953 aataatttgagaaaatgatataatttagtgtaattatagtcgtcgtgtcggtgtcggtgtcagacatcgac 6274023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 7012064 - 7012115
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggt 250  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||||||    
T  7012064 ccgacaccgataataatttgagaaaatgacataattcagtgtgatcataggt 7012115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 18513306 - 18513248
Alignment:
Q  195 gacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    ||||| |||||  ||||||||||||||||||||||||||||| |||||||||| |||||    
T  18513306 gacacagacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtc 18513248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 16402272 - 16402211
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcgg 260  Q
    |||||||| |||||||||||||||||| |||| || ||||||||| |||| |||||||||||    
T  16402272 ccgacacggataataatttgagaaaataacatgatacagtgtaattatagctgtcgtgtcgg 16402211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 19230361 - 19230312
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgt 257  Q
    |||||||||||||||||| |||||||||| |||||| |||||||||||||    
T  19230361 ataataatttgagaaaataacataattcaatgtaattataggtgtcgtgt 19230312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 34515934 - 34515881
Alignment:
Q  200 cgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    ||||||| |||||||||  |||||||||||||||||||||||| ||||||||||    
T  34515934 cgacacggataataattcaagaaaatgacataattcagtgtaaacataggtgtc 34515881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 47191058 - 47191001
Alignment:
Q  195 gacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    |||||||||| | ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  47191058 gacaccgacatggataataatttgcgaaaatgacataatttagtgtaatcctaggtgt 47191001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 261
Target Start/End: Original strand, 53968553 - 53968606
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggt 261  Q
    |||||||||| |||||||||||||||||||||  ||||||| ||||||||||||    
T  53968553 ataataatttaagaaaatgacataattcagtgatatcatagatgtcgtgtcggt 53968606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 252
Target Start/End: Complemental strand, 5654643 - 5654599
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||    
T  5654643 ataataatttgagaaaatgacataattcaatgtaatcatacgtgt 5654599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 30520489 - 30520433
Alignment:
Q  208 ataataatttgagaaaa-tgacataattcagtgtaatcataggtgtcgtgtcggtgt 263  Q
    |||||||||||| |||| |||||||||||||||||||||||||||| ||||| ||||    
T  30520489 ataataatttgaaaaaaatgacataattcagtgtaatcataggtgtagtgtcagtgt 30520433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 247
Target Start/End: Original strand, 10546155 - 10546194
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcata 247  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  10546155 ataataatttgagaaaatgacataattcaatgtaatcata 10546194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 14465346 - 14465300
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||||||||||||||| | |||||||| ||||||    
T  14465346 ataataatttgagaaaatgacataattcaatttaatcatatgtgtcg 14465300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 247
Target Start/End: Complemental strand, 43300030 - 43299984
Alignment:
Q  201 gacacgtataataatttgagaaaatgacataattcagtgtaatcata 247  Q
    |||||| |||||||||||||||||| |||||||||| ||||||||||    
T  43300030 gacacggataataatttgagaaaattacataattcaatgtaatcata 43299984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 43300616 - 43300662
Alignment:
Q  201 gacacgtataataatttgagaaaatgacataattcagtgtaatcata 247  Q
    |||||| |||||||||||||||||| |||||||||| ||||||||||    
T  43300616 gacacggataataatttgagaaaattacataattcaatgtaatcata 43300662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 252
Target Start/End: Complemental strand, 46180986 - 46180944
Alignment:
Q  210 aataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    |||||||||||||||| ||||||||||||||||||||| ||||    
T  46180986 aataatttgagaaaataacataattcagtgtaatcatatgtgt 46180944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 22440651 - 22440602
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtc 258  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||| ||||||    
T  22440651 taataatttgagaaaatcacataattcagtgtaattatatgtgacgtgtc 22440602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 34589758 - 34589704
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||| |||||||||||||||||||||||| |||||||||  |||||||||| |||||    
T  34589758 ataacaatttgagaaaatgacataattcaatgtaatcat--gtgtcgtgtcagtgtc 34589704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 7728025 - 7727965
Alignment:
Q  194 cgacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||| |||||  ||||||| ||||||||||||||| ||||||| |||| ||||||||||    
T  7728025 cgacacagacaccgataataagttgagaaaatgacatgattcagtataattataggtgtcg 7727965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 8820415 - 8820471
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||||||| ||||| |||||||||| || | ||||| ||||||||||||||||    
T  8820415 ataataatttgataaaatcacataattcaatggagtcatatgtgtcgtgtcggtgtc 8820471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 11110212 - 11110256
Alignment:
Q  210 aataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||    
T  11110212 aataatttgagaaaatgacataattcgatgtaatcatatgtgtcg 11110256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 25950607 - 25950552
Alignment:
Q  196 acaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    ||||||||||  |||||||||||| ||||||||||||||| ||||| ||||||||||    
T  25950607 acaccgacaccgataataatttga-aaaatgacataattctgtgtattcataggtgt 25950552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 252
Target Start/End: Complemental strand, 36386263 - 36386219
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    ||||||||||||||||| |||||||||||||||||| | ||||||    
T  36386263 ataataatttgagaaaaggacataattcagtgtaattaaaggtgt 36386219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 46971960 - 46971904
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgt 255  Q
    |||||||| |||||||||||||| ||||||||| || | ||| ||||||||||||||    
T  46971960 ccgacacggataataatttgagataatgacatattttactgttatcataggtgtcgt 46971904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 49659573 - 49659533
Alignment:
Q  210 aataatttgagaaaatgacataattcagtgtaatcataggt 250  Q
    |||||||||||||||||| |||||| |||||||||||||||    
T  49659573 aataatttgagaaaatgatataatttagtgtaatcataggt 49659533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 252
Target Start/End: Complemental strand, 50848355 - 50848311
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    |||||||||||| ||||||| |||||||||||||||| |||||||    
T  50848355 ataataatttgaaaaaatgatataattcagtgtaatcgtaggtgt 50848311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 683064 - 683111
Alignment:
Q  213 aatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcgg 260  Q
    |||||||||||||||||||||| | |||||||| | ||||||||||||    
T  683064 aatttgagaaaatgacataattgaatgtaatcacatgtgtcgtgtcgg 683111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 19482761 - 19482800
Alignment:
Q  299 gggacacacctaatccaagaagtgttcgtgcttcataggt 338  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  19482761 gggacacacctaatccgaggagtgttcgtgcttcataggt 19482800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 264
Target Start/End: Original strand, 23386166 - 23386209
Alignment:
Q  221 aaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||    
T  23386166 aaaatgatataatttagtgtaatcataggtgtcatgtcggtgtc 23386209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 36635332 - 36635375
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||    
T  36635332 taataatttgagaaaatcacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 903930 - 903964
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||| |||||||||||||||||    
T  903930 taataatttgagaaaatcacataattcagtgtaat 903964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Complemental strand, 8423769 - 8423735
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||| |||||||||||||||||    
T  8423769 taataatttgagaaaatcacataattcagtgtaat 8423735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 21945511 - 21945545
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||| |||||||||||||||||||||||    
T  21945511 taataatttgaaaaaatgacataattcagtgtaat 21945545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 338
Target Start/End: Complemental strand, 22234855 - 22234817
Alignment:
Q  300 ggacacacctaatccaagaagtgttcgtgcttcataggt 338  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  22234855 ggacacagctaatccgagaagtgttcgtgcttcataggt 22234817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 260
Target Start/End: Original strand, 37203257 - 37203323
Alignment:
Q  194 cgacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcgg 260  Q
    |||||| ||||||  ||||||||||| |||||||||||||| |||||||| | | |||| |||||||    
T  37203257 cgacacagacacggctaataatttgaaaaaatgacataatttagtgtaattacaagtgtagtgtcgg 37203323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 245
Target Start/End: Complemental strand, 51673503 - 51673457
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatca 245  Q
    |||||||  ||||||||| ||||||||||||||||||| ||||||||    
T  51673503 ccgacactgataataattggagaaaatgacataattcattgtaatca 51673457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 944717 - 944664
Alignment:
Q  211 ataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    ||||||||||| ||||||  |||| |||||||| |||||||||||||| |||||    
T  944717 ataatttgagataatgacgcaatttagtgtaattataggtgtcgtgtcagtgtc 944664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 2976702 - 2976739
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcat 246  Q
    |||||||||||||||||||||||||| | |||||||||    
T  2976702 taataatttgagaaaatgacataattgaatgtaatcat 2976739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 5775409 - 5775364
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| |||||||| |||||||| ||| ||||||    
T  5775409 taataatttgagaaaatcacataattaagtgtaattatatgtgtcg 5775364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 20521901 - 20521847
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||||||| ||||| |||||||||| || ||||||  ||||||||||||||||    
T  20521901 ataataatttgataaaatcacataattcaatgaaatcat--gtgtcgtgtcggtgtc 20521847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 338
Target Start/End: Original strand, 20633555 - 20633592
Alignment:
Q  301 gacacacctaatccaagaagtgttcgtgcttcataggt 338  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  20633555 gacacgcctaatccaaggagtgttcgtgcttcataggt 20633592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 21732407 - 21732358
Alignment:
Q  213 aatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtg 262  Q
    ||||||| |||||||||||||| | |||||||| | ||||||||||||||    
T  21732407 aatttgaaaaaatgacataattgattgtaatcacatgtgtcgtgtcggtg 21732358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 26276067 - 26276026
Alignment:
Q  202 acacgtataataatttgagaaaatgacataattcagtgtaat 243  Q
    |||| ||| |||||||||||||||||||||||||| ||||||    
T  26276067 acacctatgataatttgagaaaatgacataattcaatgtaat 26276026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 29088294 - 29088245
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgt 257  Q
    |||||||||||||||||||| | ||| ||||||||| ||||| |||||||    
T  29088294 ataataatttgagaaaatgataaaatacagtgtaattataggcgtcgtgt 29088245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 33950144 - 33950189
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| |||||||| | |||||||||| ||||||    
T  33950144 taataatttgagaaaatcacataatttaatgtaatcatatgtgtcg 33950189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 40613458 - 40613503
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||| ||||||||||| ||||||||||||||||| ||| ||||||    
T  40613458 taatattttgagaaaatcacataattcagtgtaattatatgtgtcg 40613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 54580074 - 54580029
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||| ||||| ||||||||||||||||| ||| ||||||    
T  54580074 taataatttgaaaaaatcacataattcagtgtaattataagtgtcg 54580029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 8457933 - 8457969
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatca 245  Q
    |||||||||||||||||||||||||| | ||||||||    
T  8457933 taataatttgagaaaatgacataattgaatgtaatca 8457969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 9996834 - 9996882
Alignment:
Q  195 gacaccgacacgtataataatttgagaaaatgacataattcagtgtaat 243  Q
    |||||||||||  | |||||||||||||||| |||||||||||| ||||    
T  9996834 gacaccgacactgacaataatttgagaaaatcacataattcagtataat 9996882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 12895258 - 12895214
Alignment:
Q  292 cgacatggggacacacctaatccaagaagtgttcgtgcttcatag 336  Q
    |||||| ||||||| |||||||| || ||||||||||||||||||    
T  12895258 cgacatcgggacacgcctaatccgaggagtgttcgtgcttcatag 12895214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 29205438 - 29205486
Alignment:
Q  195 gacaccgacacgtataataatttgagaaaatgacataattcagtgtaat 243  Q
    |||||| |||||  ||||||||||| ||||| |||||||||||||||||    
T  29205438 gacaccaacacggctaataatttgaaaaaatcacataattcagtgtaat 29205486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 30103406 - 30103363
Alignment:
Q  210 aataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||||||| |||||||| |||||||||||| ||||||    
T  30103406 aataatttgagaaaatcacataatt-agtgtaatcatatgtgtcg 30103363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 276
Target Start/End: Complemental strand, 30982929 - 30982862
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtc-gtgtcggtgtcagtgtcagacac 276  Q
    |||| |||||||||||| ||||| ||||||||||| ||| ||||| ||||| ||||| |||||||||||    
T  30982929 taatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtc-gtgtcggtgtcagacac 30982862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 252
Target Start/End: Complemental strand, 39507171 - 39507127
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    ||||||||||  |||||||| |||||| |||||||||||||||||    
T  39507171 ataataatttatgaaaatgatataattaagtgtaatcataggtgt 39507127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 40699981 - 40699937
Alignment:
Q  210 aataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||||||||||| ||  |||||||| ||||||    
T  40699981 aataatttgagaaaatgacataatttagcttaatcatatgtgtcg 40699937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 252
Target Start/End: Original strand, 40783964 - 40784008
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    |||||||||||||| ||| ||||||||||| ||||||||| ||||    
T  40783964 ataataatttgagataataacataattcagcgtaatcatatgtgt 40784008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 43188619 - 43188647
Alignment:
Q  208 ataataatttgagaaaatgacataattca 236  Q
    |||||||||||||||||||||||||||||    
T  43188619 ataataatttgagaaaatgacataattca 43188647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 48845148 - 48845176
Alignment:
Q  208 ataataatttgagaaaatgacataattca 236  Q
    |||||||||||||||||||||||||||||    
T  48845148 ataataatttgagaaaatgacataattca 48845176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 53381567 - 53381527
Alignment:
Q  299 gggacacacctaatccaagaagtgttcgtgcttcataggtt 339  Q
    |||||||||||||||| || ||||| |||||||||||||||    
T  53381567 gggacacacctaatccgaggagtgtccgtgcttcataggtt 53381527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 53381653 - 53381592
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||  |||||||||| |||||||||    |||||||||||| ||||| ||||||||||||||    
T  53381653 ccgacaccgataataatttaagaaaatga----attcagtgtaattataggcgtcgtgtcggtgtc 53381592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 29812729 - 29812654
Alignment:
Q  195 gacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtc 270  Q
    ||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||    
T  29812729 gacaccgacccgtataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtcggtgtc 29812654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 23930218 - 23930282
Alignment:
Q  200 cgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23930218 cgacacggatagtaatttgagaaaatgacataattcagtgtaatcataggtgttgtgtcggtgtc 23930282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 43249991 - 43250056
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||| |||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  43249991 ccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcggtgtc 43250056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 7133342 - 7133274
Alignment:
Q  196 acaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    ||||||||||  || |||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  7133342 acaccgacacagatgataatttgagaaaatgacataattcagtgtaatcataggtggtgtgtcggtgtc 7133274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 191 - 280
Target Start/End: Complemental strand, 22683824 - 22683733
Alignment:
Q  191 caccgacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtc--gtgtcggtgtcagtgtcagacaccgac 280  Q
    |||||||||||| ||| ||||||||||||||| |||| ||||||||||| |||||||||||||  ||||| ||||||||||| |||| ||||    
T  22683824 caccgacaccgagacggataataatttgagaatatgatataattcagtgcaatcataggtgtcgtgtgtcagtgtcagtgtcggacatcgac 22683733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 38804616 - 38804551
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||| |||||||||| ||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  38804616 ccgacacggataataatttcagaaaatgacataatccagggtaatcataggtgtcgtgttggtgtc 38804551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 260
Target Start/End: Original strand, 23751899 - 23751959
Alignment:
Q  200 cgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcgg 260  Q
    ||||||| |||||||||||| ||||||| |||||| |||||||||||||||||||||||||    
T  23751899 cgacacggataataatttgataaaatgatataatttagtgtaatcataggtgtcgtgtcgg 23751959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 4017855 - 4017790
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||| ||||||||||||||||| || |||||| |||||||||||| ||||||||| ||||||    
T  4017855 ccgacacggataataatttgagaaaacgatataatttagtgtaatcataagtgtcgtgttggtgtc 4017790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 208 - 260
Target Start/End: Original strand, 12278842 - 12278894
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcgg 260  Q
    |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||    
T  12278842 ataataatttaagaaaatgacataattcagtgtaattatatgtgtcgtgtcgg 12278894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 17780136 - 17780080
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||||| |||||||||||||||||  |||||| ||||||||||||||||||||    
T  17780136 ataataatttaagaaaatgacataattctatgtaataataggtgtcgtgtcggtgtc 17780080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 5938479 - 5938537
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcag 266  Q
    |||||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||    
T  5938479 ataataatttgataaaataacataattcagtataattataggtgttgtgtcggtgtcag 5938537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 18233646 - 18233604
Alignment:
Q  212 taatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  18233646 taatttgagaaaatgacataattcagtgtaattataggtgtcg 18233604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 38134458 - 38134412
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||    
T  38134458 ataataatttgagaaaatgacataattcaatgtaatcatatgtgtcg 38134412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 10230125 - 10230069
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    ||||||||||||| |||||||||||||||||||||  |||| |||||||| ||||||    
T  10230125 ataataatttgaggaaatgacataattcagtgtaagtatagatgtcgtgttggtgtc 10230069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 2525896 - 2525839
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtc-gtgtcggtgtc 264  Q
    ||||||||||||| ||||||||||||||| | |||||||| ||||| |||||||||||    
T  2525896 ataataatttgagcaaatgacataattcaatataatcatatgtgtcggtgtcggtgtc 2525839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 4909158 - 4909203
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||    
T  4909158 ataataatttgagaaaattacataattcattgtaatcatatgtgtc 4909203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 200 - 257
Target Start/End: Original strand, 13427575 - 13427632
Alignment:
Q  200 cgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgt 257  Q
    ||||||| | |||||||||| |||||||||||||| ||| ||||||||| ||||||||    
T  13427575 cgacacggaaaataatttgaaaaaatgacataatttagtataatcatagatgtcgtgt 13427632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 245
Target Start/End: Complemental strand, 44172942 - 44172905
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatca 245  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  44172942 ataataatttgagaaaatgacataattcaatgtaatca 44172905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 252
Target Start/End: Complemental strand, 36314679 - 36314635
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||    
T  36314679 ataataatttgagaaaatgacatatttcaatgtaatcatatgtgt 36314635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 41229348 - 41229304
Alignment:
Q  210 aataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||||||||||||||||| || |||||||||| ||||    
T  41229348 aataatttgagaaaatgacataattctgtataatcataggcgtcg 41229304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 30813820 - 30813863
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    ||||||||||||||||| ||||||||||||||||| | ||||||    
T  30813820 taataatttgagaaaattacataattcagtgtaattacaggtgt 30813863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 2424622 - 2424656
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||| |||||||||||||||||    
T  2424622 taataatttgagaaaatcacataattcagtgtaat 2424656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 20549786 - 20549844
Alignment:
Q  196 acaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||   ||||||||||||||||| || |||||||||||||| ||| ||||||    
T  20549786 acaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcg 20549844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 21247788 - 21247750
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcat 246  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  21247788 ataataatttgagaaaatgacgtaattcaatgtaatcat 21247750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 21880160 - 21880194
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||| |||||||||||||||||    
T  21880160 taataatttgagaaaattacataattcagtgtaat 21880194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 23128713 - 23128667
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||||||||  | ||||||||||||||||||| ||||||    
T  23128713 ataataatttgagaaaaccatataattcagtgtaatcatatgtgtcg 23128667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 27945049 - 27945083
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||| |||||||||||||||||    
T  27945049 taataatttgagaaaattacataattcagtgtaat 27945083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Complemental strand, 29787420 - 29787386
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||| |||||||||||||||||    
T  29787420 taataatttgagaaaatcacataattcagtgtaat 29787386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 32308128 - 32308162
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||| |||||||||||||||||    
T  32308128 taataatttgagaaaatcacataattcagtgtaat 32308162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 5835255 - 5835300
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||| ||||||||||| ||||||||||||||||| ||| ||||||    
T  5835255 taatagtttgagaaaataacataattcagtgtaattatatgtgtcg 5835300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 7328742 - 7328697
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| |||||||| |||||||| ||| ||||||    
T  7328742 taataatttgagaaaataacataatttagtgtaattatatgtgtcg 7328697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 16341489 - 16341538
Alignment:
Q  194 cgacaccgacacgtataataatttgagaaaatgacataattcagtgtaat 243  Q
    |||||| |||||  |||||||||||||||||| |||||||| ||||||||    
T  16341489 cgacacggacactgataataatttgagaaaatcacataattaagtgtaat 16341538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 19992009 - 19992054
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| ||||| ||||||||||| ||| ||||||    
T  19992009 taataatttgagaaaatcacatatttcagtgtaattataagtgtcg 19992054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 25239763 - 25239710
Alignment:
Q  200 cgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    ||||||| ||||||||||||||||||   |||| |||||||||| |||||||||    
T  25239763 cgacacggataataatttgagaaaattttataactcagtgtaattataggtgtc 25239710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 27732290 - 27732245
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||| ||||||| ||||||||||||||||| ||| ||||||    
T  27732290 taataatttaagaaaattacataattcagtgtaattatatgtgtcg 27732245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 30731046 - 30731079
Alignment:
Q  210 aataatttgagaaaatgacataattcagtgtaat 243  Q
    |||||||||||||||| |||||||||||||||||    
T  30731046 aataatttgagaaaatcacataattcagtgtaat 30731079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 261
Target Start/End: Complemental strand, 5937479 - 5937419
Alignment:
Q  202 acacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtc-gtgtcggt 261  Q
    ||||| |||| | |||||||||||||||||||||| |||||||| | ||||| ||||||||    
T  5937479 acacggataaaattttgagaaaatgacataattcaatgtaatcacaagtgtctgtgtcggt 5937419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 9778587 - 9778627
Alignment:
Q  299 gggacacacctaatccaagaagtgttcgtgcttcataggtt 339  Q
    ||||||| ||||||||||| ||||| |||||||||||||||    
T  9778587 gggacacgcctaatccaaggagtgtccgtgcttcataggtt 9778627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 11592057 - 11591997
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtg 268  Q
    |||||||||||| |||| || || ||||||||| |||||||||||| |||| |||| ||||    
T  11592057 ataataatttgaaaaaacgatattattcagtgttatcataggtgtcatgtcagtgttagtg 11591997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 17307904 - 17307944
Alignment:
Q  212 taatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    |||||||||||||| ||||||||||||||||| ||| ||||    
T  17307904 taatttgagaaaataacataattcagtgtaattatatgtgt 17307944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 17851439 - 17851483
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    ||||||||| ||||||| ||||||||||||||||| ||| |||||    
T  17851439 taataattttagaaaatcacataattcagtgtaattatatgtgtc 17851483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 19930991 - 19930947
Alignment:
Q  210 aataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||| |||||||||||||||| |||||| ||| ||||||    
T  19930991 aataatttgataaaatgacataattcaatgtaattatatgtgtcg 19930947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 22602756 - 22602716
Alignment:
Q  214 atttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||| ||||||||||||||||| ||| ||||||    
T  22602756 atttgagaaaatcacataattcagtgtaattatatgtgtcg 22602716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 22868050 - 22868094
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    ||||||| ||||||||| ||||||||||||||||| ||| |||||    
T  22868050 taataatatgagaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 30730935 - 30730967
Alignment:
Q  211 ataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||||||| |||||||||||    
T  30730935 ataatttgagaaaatgacatagttcagtgtaat 30730967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 201 - 264
Target Start/End: Original strand, 34446565 - 34446628
Alignment:
Q  201 gacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34446565 gacacggataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 34446628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 6389741 - 6389805
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgt 263  Q
    |||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  6389741 ccgacacggataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgt 6389805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 196 - 276
Target Start/End: Complemental strand, 30781358 - 30781278
Alignment:
Q  196 acaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacac 276  Q
    |||| ||||||| |||||||||||||||||||||||||| | |||||||||||||||| ||||||||||| | ||||||||    
T  30781358 acactgacacgtgtaataatttgagaaaatgacataattaattgtaatcataggtgtcatgtcggtgtcaatatcagacac 30781278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 12235578 - 12235521
Alignment:
Q  201 gacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtc 258  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12235578 gacacggataataattagagaaaatgacataattcagtgtaatcataggtgtcgtgtc 12235521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 200 - 260
Target Start/End: Complemental strand, 12086405 - 12086345
Alignment:
Q  200 cgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcgg 260  Q
    ||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  12086405 cgacacggataataatttgagataatgacataattcagtttaatcataggtgtcgtgtcgg 12086345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 17168515 - 17168459
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  17168515 ataataatttgagaaaatgatataatttagtgtaataataggtgtcgtgtcggtgtc 17168459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 19602233 - 19602177
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||||||||||||||| |||||||||||||||||||||| | |||||||||||    
T  19602233 ataataatttgagaaaatgatataattcagtgtaatcataggtattgtgtcggtgtc 19602177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 34895115 - 34895041
Alignment:
Q  179 tatgctattaagcaccgacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    |||||||| || ||| |||||  |||| ||||||||||||||||||| | | |||||||||||||||||||||||    
T  34895115 tatgctatgaaacacggacacaaacacctataataatttgagaaaattatacaattcagtgtaatcataggtgtc 34895041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 6299510 - 6299567
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtg 256  Q
    |||||| | |||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  6299510 ccgacatggataataatttgagaaaatgatataattcaatgtaatgataggtgtcgtg 6299567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 6306320 - 6306377
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtg 256  Q
    |||||| | |||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  6306320 ccgacatggataataatttgagaaaatgatataattcaatgtaatgataggtgtcgtg 6306377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 7569233 - 7569176
Alignment:
Q  195 gacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    |||||| ||||  |||||||||||||||||| ||||||||||||||||| ||||||||    
T  7569233 gacaccaacacagataataatttgagaaaattacataattcagtgtaattataggtgt 7569176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 13689258 - 13689193
Alignment:
Q  195 gacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcgg 260  Q
    |||||||||||  |||||||||||||||||| ||| | |||| ||||||||||||| |||||||||    
T  13689258 gacaccgacacagataataatttgagaaaataacaaatttcaatgtaatcataggtatcgtgtcgg 13689193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 26247433 - 26247489
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||||| ||||||||||||| || ||| ||||||||||| |||||||||||||    
T  26247433 ataataatttaagaaaatgacatattttagtataatcataggtttcgtgtcggtgtc 26247489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 278
Target Start/End: Original strand, 34229451 - 34229531
Alignment:
Q  198 accgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacaccg 278  Q
    ||||||| | |||||||||||| ||||||||| || |||||||||| |||| || ||||| |||||| ||||| |||||||    
T  34229451 accgacatggataataatttgaaaaaatgacacaagtcagtgtaataatagatgccgtgttggtgtcggtgtcggacaccg 34229531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 9024225 - 9024183
Alignment:
Q  211 ataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    |||||||||||||||||||||||||| |||||||||| |||||    
T  9024225 ataatttgagaaaatgacataattcaatgtaatcatatgtgtc 9024183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 7265644 - 7265599
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  7265644 taataatttgagaaaatcacataattcagtgtaattatatgtgtcg 7265599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 9025545 - 9025500
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  9025545 taataatttgagaaaatcacataattcagtgtaattatatgtgtcg 9025500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 9195805 - 9195760
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||||||||||||||||| |||||||| ||| ||||||    
T  9195805 taataatttgagaaaatgacataatttagtgtaattatatgtgtcg 9195760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 19040360 - 19040404
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||    
T  19040360 taataatttgagaaaatcacataattcagtgtaattatatgtgtc 19040404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 28715289 - 28715337
Alignment:
Q  195 gacaccgacacgtataataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||| ||||||  ||||||||||| |||||||||||||||||||||||    
T  28715289 gacactgacacggctaataatttgaaaaaatgacataattcagtgtaat 28715337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 9629392 - 9629447
Alignment:
Q  210 aataatttgagaaaatgacataattcagtgtaatcataggtgtc-gtgtcggtgtc 264  Q
    |||||||||||||||| |||||||||| |||||| ||| ||||| |||||||||||    
T  9629392 aataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggtgtc 9629447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 254
Target Start/End: Complemental strand, 13364754 - 13364711
Alignment:
Q  211 ataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||| | ||||||||||||||||||| ||||||    
T  13364754 ataatttgagaaaatcatataattcagtgtaatcatatgtgtcg 13364711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 28862128 - 28862175
Alignment:
Q  208 ataataatttgagaaaatgacat-aattcagtgtaatcataggtgtcg 254  Q
    |||||||||||| |||||||||| ||||||||||||||||| ||||||    
T  28862128 ataataatttgataaaatgacattaattcagtgtaatcatatgtgtcg 28862175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 266
Target Start/End: Original strand, 1532248 - 1532308
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcata---ggtgtcgtgtcggtgtcag 266  Q
    ||||||||||| ||||| ||||||||||||||||| |||   |||||||||| ||||||||    
T  1532248 taataatttgataaaattacataattcagtgtaattatatgtggtgtcgtgttggtgtcag 1532308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 242
Target Start/End: Complemental strand, 2140533 - 2140499
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaa 242  Q
    ||||||||||||||||||||||||||||| |||||    
T  2140533 ataataatttgagaaaatgacataattcaatgtaa 2140499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 252
Target Start/End: Complemental strand, 4420225 - 4420187
Alignment:
Q  214 atttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  4420225 atttgagaaaatgatataattcagtgtaaccataggtgt 4420187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 254
Target Start/End: Original strand, 10157995 - 10158037
Alignment:
Q  212 taatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||||||||||| |||||||| | ||||||    
T  10157995 taatttgagaaaatgacataattcaatgtaatcacatgtgtcg 10158037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 29049892 - 29049930
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcat 246  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  29049892 ataataatttgagaaaattacataattcaatgtaatcat 29049930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Complemental strand, 31579276 - 31579242
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||| |||||||||||||||||    
T  31579276 taataatttgagaaaatcacataattcagtgtaat 31579242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 245
Target Start/End: Complemental strand, 4859165 - 4859128
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatca 245  Q
    |||||||||||||||||||||||||| || ||||||||    
T  4859165 ataataatttgagaaaatgacataatccaatgtaatca 4859128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 7086803 - 7086848
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| |||||||| |||||||| ||| ||||||    
T  7086803 taataatttgagaaaatcacataatttagtgtaattatatgtgtcg 7086848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 7625121 - 7625170
Alignment:
Q  200 cgacacgtataataatttgagaaaatgacataattcagtgtaatcatagg 249  Q
    ||||||| |||||||||||||||||||| |||||| ||| |||| |||||    
T  7625121 cgacacggataataatttgagaaaatgatataatttagtataattatagg 7625170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 9617442 - 9617487
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| |||||||||| |||||| ||| ||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcg 9617487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 10031584 - 10031633
Alignment:
Q  215 tttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||||||||||||||||| |||||||| | |||| ||||| |||||    
T  10031584 tttgagaaaatgacataattcaatgtaatcacaagtgttgtgtcagtgtc 10031633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 10842540 - 10842585
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||| ||||| |||||||| |||||||||||| ||||||    
T  10842540 taataatttgaaaaaatcacataatttagtgtaatcatatgtgtcg 10842585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 11591917 - 11591876
Alignment:
Q  213 aatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtgtcg 11591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 280
Target Start/End: Complemental strand, 13211333 - 13211258
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtc---gtgtcggtgtcagtgtcagacaccgac 280  Q
    ||||||||||||||||||||||||||| | | ||||||| || |||   || |||||||  |||||||||||||||    
T  13211333 ataataatttgagaaaatgacataatttaatataatcatcggcgtcggtgtctcggtgttggtgtcagacaccgac 13211258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 13851744 - 13851789
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| || |||||||||||||| ||| ||||||    
T  13851744 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 13851789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 19369817 - 19369870
Alignment:
Q  201 gacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||| |||| | |||||||||||||||||||||| |||||||| | ||||||    
T  19369817 gacacggataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcg 19369870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 21385171 - 21385204
Alignment:
Q  201 gacacgtataataatttgagaaaatgacataatt 234  Q
    |||||| |||||||||||||||||||||||||||    
T  21385171 gacacgaataataatttgagaaaatgacataatt 21385204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 26178732 - 26178687
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||| ||||| |||||||| |||||||||||| ||||||    
T  26178732 taataatttgataaaatcacataatttagtgtaatcatatgtgtcg 26178687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 254
Target Start/End: Original strand, 26562701 - 26562742
Alignment:
Q  213 aatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  26562701 aatttgagaaaatcacataattcagtgtaattatatgtgtcg 26562742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 30866195 - 30866150
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| |||||||||| |||||| ||| ||||||    
T  30866195 taataatttgagaaaatcacataattcaatgtaattatatgtgtcg 30866150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 34446653 - 34446690
Alignment:
Q  299 gggacacacctaatccaagaagtgttcgtgcttcatag 336  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  34446653 gggacacacctaatccaaggagtgtccgtgcttcatag 34446690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 2117074 - 2117134
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcg 259  Q
    ||||||| | ||||||||||| ||||| |||||||||| || ||| ||| |||||||||||    
T  2117074 ccgacacctctaataatttgaaaaaatcacataattcaatgcaattataagtgtcgtgtcg 2117134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 17341715 - 17341671
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    ||||||||||| ||||| ||||||||||||||||| ||| |||||    
T  17341715 taataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 276
Target Start/End: Original strand, 24832596 - 24832661
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacac 276  Q
    |||||||||||||||||   |||||| |||||||| ||| ||||||||||  || |||||||||||||    
T  24832596 taataatttgagaaaatcttataatttagtgtaattatatgtgtcgtgtc--tgacagtgtcagacac 24832661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 29711269 - 29711297
Alignment:
Q  208 ataataatttgagaaaatgacataattca 236  Q
    |||||||||||||||||||||||||||||    
T  29711269 ataataatttgagaaaatgacataattca 29711297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 8e-25; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 208 - 339
Target Start/End: Original strand, 52369782 - 52369909
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacaccgaccgatgtgtgttcgacatggggacacac 307  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| || || |||||||||    | |||| | |||  |||||||||    
T  52369782 ataataatttgagaaaattacataattcaatgtaatcataggtgtcgtgtcggtgtcggtatcggacaccgac----gcgtgtccaacaccgggacacac 52369877  T
Q  308 ctaatccaagaagtgttcgtgcttcataggtt 339  Q
    ||| ||| || ||||| |||||||||||||||    
T  52369878 ctattccgaggagtgtccgtgcttcataggtt 52369909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 12704715 - 12704653
Alignment:
Q  202 acacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    ||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  12704715 acacggataataatttgaaaaaatgacataattcaatgtaatcataggtgtcgtgtcggtgtc 12704653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 207 - 258
Target Start/End: Complemental strand, 3730218 - 3730167
Alignment:
Q  207 tataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtc 258  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3730218 tataataatttgagataatgacataattcagtgtaatcataggtgtcgtgtc 3730167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 257
Target Start/End: Original strand, 34189409 - 34189483
Alignment:
Q  183 ctattaagcaccgacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgt 257  Q
    |||| |||||| |||| ||||||  |||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  34189409 ctatgaagcacggacatcgacacagataataatttgagaaaatgacatatttcagtgtaatcgtaggtgtcgtgt 34189483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 15864831 - 15864892
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcgg 260  Q
    |||||||| |||||||||||| ||||||| |||||| |||||||||||||||||||||||||    
T  15864831 ccgacacggataataatttgaaaaaatgatataatttagtgtaatcataggtgtcgtgtcgg 15864892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 24205102 - 24205041
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcgg 260  Q
    |||||||| |||||||||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  24205102 ccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcgg 24205041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 199 - 336
Target Start/End: Original strand, 25074787 - 25074914
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacaccgaccgatgtgtgttcgacatg 298  Q
    |||||||  ||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| |      ||||| ||    | |||| |||||      
T  25074787 ccgacaccgataataatttgagaaaatgacataattgagtgtaatcataggcgttgtgtcggtgtctg------acaccaac----gcgtgtccgacact 25074876  T
Q  299 gggacacacctaatccaagaagtgttcgtgcttcatag 336  Q
    |||||||||||||||| || ||||||||||||||||||    
T  25074877 gggacacacctaatccgaggagtgttcgtgcttcatag 25074914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 1830341 - 1830397
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgt 255  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||    
T  1830341 ccgacacttttaataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 1830397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 25892467 - 25892523
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||    
T  25892467 ataataatttaagaaaatgatataattcagtgtaatcataggtgtcgtgtcagtgtc 25892523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 20691326 - 20691372
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  20691326 ataataatttgagaaaatgacataattcagtgtaatcatatgtgtcg 20691372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 21211289 - 21211350
Alignment:
Q  202 acacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgt 263  Q
    ||||| |||||||||||||||||| ||||| ||||||||||| || ||||||||||||||||    
T  21211289 acacggataataatttgagaaaattacatagttcagtgtaattatgggtgtcgtgtcggtgt 21211350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 25365456 - 25365521
Alignment:
Q  195 gacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcgg 260  Q
    ||||||| || | ||||||||||||||| |||||||||||| ||||||||||| ||||||||||||    
T  25365456 gacaccggcatggataataatttgagaatatgacataattcggtgtaatcataagtgtcgtgtcgg 25365521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 255
Target Start/End: Original strand, 21149074 - 21149121
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgt 255  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||    
T  21149074 ataataatttgagaaaatgacataattcagtgtaatcaaagatgtcgt 21149121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 34307831 - 34307776
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    ||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||    
T  34307831 taataatttgagaaaatcacatatttcagtgtaattataagtgtcgtgtcggtgtc 34307776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 7931646 - 7931588
Alignment:
Q  212 taatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtc 270  Q
    |||||||||| ||| || |||||||||||||| |||||||||||||| |||||||||||    
T  7931646 taatttgagagaataacgtaattcagtgtaattataggtgtcgtgtctgtgtcagtgtc 7931588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 14223914 - 14223849
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||  ||||||||||||||||| || |||||| |||||| ||||| ||||||||||||||||    
T  14223914 ccgacacagataataatttgagaaaacgatataatttagtgtattcataagtgtcgtgtcggtgtc 14223849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 25652089 - 25652028
Alignment:
Q  202 acacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgt 263  Q
    ||||| |||||||||||||||||||| ||||||||||||| | |||||||| ||||| ||||    
T  25652089 acacggataataatttgagaaaatgatataattcagtgtagttataggtgttgtgtcagtgt 25652028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 8903430 - 8903489
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcg 259  Q
    |||||||| |||||| |||||||||||||||| ||| |||||||| |||||||||||||||    
T  8903430 ccgacacggataatattttgagaaaatgacat-atttagtgtaattataggtgtcgtgtcg 8903489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 14209194 - 14209246
Alignment:
Q  287 gtgttcgacatggggacacacctaatccaagaagtgttcgtgcttcataggtt 339  Q
    |||| |||||| |||| |||||||||||||||||||| |||||||||||||||    
T  14209194 gtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcataggtt 14209246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 41319362 - 41319306
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||||||| |||||||||||||||| ||||||  || ||||||||||||||||    
T  41319362 ataataatttgaaaaaatgacataattcaatgtaattgtatgtgtcgtgtcggtgtc 41319306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 242
Target Start/End: Complemental strand, 16789711 - 16789668
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaa 242  Q
    |||||||  |||||||||||||||||||||||||||||||||||    
T  16789711 ccgacacagataataatttgagaaaatgacataattcagtgtaa 16789668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 21367289 - 21367340
Alignment:
Q  213 aatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||||||||||||||||| ||||||||||| | ||| |||||||||||    
T  21367289 aatttgagaaaatgacataatttagtgtaatcatggttgttgtgtcggtgtc 21367340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 21861563 - 21861633
Alignment:
Q  195 gacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtca 265  Q
    |||||||||||  |||| ||||||  ||||||||||||||||||||||||||| |||| | || |||||||    
T  21861563 gacaccgacacagataacaatttggaaaaatgacataattcagtgtaatcataagtgtagcgttggtgtca 21861633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 26665133 - 26665195
Alignment:
Q  198 accgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcgg 260  Q
    ||||||||  ||||||||||||||||||||| | ||||| |||||| ||||| ||||||||||    
T  26665133 accgacacaaataataatttgagaaaatgacgtgattcactgtaattataggcgtcgtgtcgg 26665195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 40150623 - 40150577
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||||||||||| |||||||| |||||||||| ||||||    
T  40150623 ataataatttgagaaaatgatataattcaatgtaatcatatgtgtcg 40150577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 276
Target Start/End: Complemental strand, 16192814 - 16192734
Alignment:
Q  196 acaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcg-tgtcggtgtcagtgtcagacac 276  Q
    ||||||||||   ||||||||||||||||| ||||||||||||||||| ||| |||| | |||| ||||| |||||||||||    
T  16192814 acaccgacaccgttaataatttgagaaaataacataattcagtgtaattatatgtgttgatgtc-gtgtcggtgtcagacac 16192734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 51512232 - 51512179
Alignment:
Q  211 ataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    ||||||||| ||||| |||||||||| || ||||||| ||||||||||||||||    
T  51512232 ataatttgataaaatcacataattcaatggaatcatatgtgtcgtgtcggtgtc 51512179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 27903639 - 27903695
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    ||||||||||||||||| || |||||| | |||||||||| |||| |||||||||||    
T  27903639 ataataatttgagaaaacgatataatttaatgtaatcataagtgttgtgtcggtgtc 27903695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 7928444 - 7928503
Alignment:
Q  195 gacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||   ||||||||||| ||||| ||||||||||||||||| ||| ||||||    
T  7928444 gacaccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcg 7928503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 254
Target Start/End: Original strand, 8039216 - 8039259
Alignment:
Q  211 ataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||||||| ||| ||||| |||||||||||||||||    
T  8039216 ataatttgagaaaatggcatgattcaatgtaatcataggtgtcg 8039259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 12100264 - 12100326
Alignment:
Q  195 gacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtc 258  Q
    ||||||||  || |||||||||||| ||| ||| ||||||||||||||| ||||||||||||||    
T  12100264 gacaccgaatcgcataataatttgacaaa-tgatataattcagtgtaataataggtgtcgtgtc 12100326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 49651753 - 49651714
Alignment:
Q  299 gggacacacctaatccaagaagtgttcgtgcttcataggt 338  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  49651753 gggacacacctaatccgagaagtgtccgtgcttcataggt 49651714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 247
Target Start/End: Complemental strand, 4704335 - 4704305
Alignment:
Q  217 tgagaaaatgacataattcagtgtaatcata 247  Q
    |||||||||||||||||||||||||||||||    
T  4704335 tgagaaaatgacataattcagtgtaatcata 4704305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 8789614 - 8789556
Alignment:
Q  196 acaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||  | ||||||||||||||| ||||||||| ||||||| ||| ||||||    
T  8789614 acaccgacacggcttataatttgagaaaatcacataattccgtgtaattatatgtgtcg 8789556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 11251986 - 11252020
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||| |||||||||||||||||    
T  11251986 taataatttgagaaaatcacataattcagtgtaat 11252020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 13799511 - 13799557
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||| |||||||||||||||||||| |||||||| ||| ||||||    
T  13799511 ataatagtttgagaaaatgacataattaagtgtaataatatgtgtcg 13799557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 20141107 - 20141153
Alignment:
Q  212 taatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtc 258  Q
    |||||||||||| |||||||||| | |||||||||| ||||||||||    
T  20141107 taatttgagaaactgacataattgaatgtaatcatatgtgtcgtgtc 20141153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 33006830 - 33006876
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||| ||||| |||||||||||| ||||| |||||||||    
T  33006830 ataataatttgataaaattacataattcagtttaatcgtaggtgtcg 33006876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 8039886 - 8039841
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| | ||||||||||||||| ||| ||||||    
T  8039886 taataatttgagaaaattatataattcagtgtaattatatgtgtcg 8039841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 8383265 - 8383310
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| | ||||||||||||||| ||| ||||||    
T  8383265 taataatttgagaaaatcatataattcagtgtaattataagtgtcg 8383310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 8903517 - 8903554
Alignment:
Q  299 gggacacacctaatccaagaagtgttcgtgcttcatag 336  Q
    |||||||||||||||| || ||||||||||||||||||    
T  8903517 gggacacacctaatccgaggagtgttcgtgcttcatag 8903554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 245
Target Start/End: Complemental strand, 9210877 - 9210840
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatca 245  Q
    ||||||||||||||||||||||||||||| || |||||    
T  9210877 ataataatttgagaaaatgacataattcaatggaatca 9210840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 10954960 - 10955005
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||| ||||| ||||||||||||||||||| | ||||||    
T  10954960 taataatttgaaaaaatcacataattcagtgtaatcacaagtgtcg 10955005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 11313865 - 11313808
Alignment:
Q  195 gacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    |||||||||||   ||||||||||||||||| |||||||| |||||||| ||| ||||    
T  11313865 gacaccgacactgctaataatttgagaaaatcacataatttagtgtaattatatgtgt 11313808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 20503474 - 20503507
Alignment:
Q  210 aataatttgagaaaatgacataattcagtgtaat 243  Q
    |||||||||| |||||||||||||||||||||||    
T  20503474 aataatttgaaaaaatgacataattcagtgtaat 20503507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 28779569 - 28779610
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcatagg 249  Q
    |||||||  ||| |||||||||||||||||||||||||||||    
T  28779569 ataataacatgataaaatgacataattcagtgtaatcatagg 28779610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 33548835 - 33548896
Alignment:
Q  194 cgacaccgacacgtataataatttgagaaaatgacataattcagtgt-aatcataggtgtcg 254  Q
    |||||| |||||  ||||||||||||||||||||| |||||||| || ||||||| ||||||    
T  33548835 cgacacagacaccgataataatttgagaaaatgacttaattcagagtaaatcataagtgtcg 33548896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 40697910 - 40697853
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtc-gtgtcggtgtc 264  Q
    |||||||| |||||||||||||||||||| | ||| |||| ||||| |||||||||||    
T  40697910 ataataatatgagaaaatgacataattcaatctaaccatatgtgtcggtgtcggtgtc 40697853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 9800038 - 9800082
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||| | ||||||||||||||||| ||||||||| |||||||    
T  9800038 ccgacacctctaataatttgagaaaattacataattccgtgtaat 9800082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 299 - 335
Target Start/End: Original strand, 14216985 - 14217021
Alignment:
Q  299 gggacacacctaatccaagaagtgttcgtgcttcata 335  Q
    |||||||||||||||| |||||||| |||||||||||    
T  14216985 gggacacacctaatccgagaagtgtccgtgcttcata 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 299 - 335
Target Start/End: Original strand, 14223114 - 14223150
Alignment:
Q  299 gggacacacctaatccaagaagtgttcgtgcttcata 335  Q
    |||||||||||||||| |||||||| |||||||||||    
T  14223114 gggacacacctaatccgagaagtgtccgtgcttcata 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 32804591 - 32804547
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    ||||||||||||||||| |||||||| |||||||| ||| |||||    
T  32804591 taataatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 40052394 - 40052434
Alignment:
Q  299 gggacacacctaatccaagaagtgttcgtgcttcataggtt 339  Q
    ||||||| |||||||| || |||||||||||||||||||||    
T  40052394 gggacacgcctaatccgaggagtgttcgtgcttcataggtt 40052434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 46336195 - 46336247
Alignment:
Q  182 gctattaagcaccgacaccgacacgtataataatttgagaaaatgacataatt 234  Q
    ||||| |||||| |||||||||| | | |||||||||||||||| ||||||||    
T  46336195 gctatgaagcacggacaccgacatgaacaataatttgagaaaataacataatt 46336247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 49505205 - 49505161
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    ||||||||||||||||| |||||||| |||||||| ||| |||||    
T  49505205 taataatttgagaaaatcacataatttagtgtaattatatgtgtc 49505161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 280
Target Start/End: Complemental strand, 13009565 - 13009473
Alignment:
Q  188 aagcaccgacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacaccgac 280  Q
    |||||| |||||||||||| |||||||||||||||||  | |||||| |||||||||||| |||||||||||||||  |||||||||||||||    
T  13009565 aagcacggacaccgacacggataataatttgagaaaacaatataatttagtgtaatcataagtgtcgtgtcggtgtaggtgtcagacaccgac 13009473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 195 - 264
Target Start/End: Original strand, 40063945 - 40064014
Alignment:
Q  195 gacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||||||  ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  40063945 gacaccgacaccaataataatttgagaaaatgacataattcattgtaatcataggcgtcgtgtcggtgtc 40064014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 44067514 - 44067579
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||| |||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  44067514 ccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcggtgtc 44067579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 196 - 276
Target Start/End: Original strand, 13845229 - 13845309
Alignment:
Q  196 acaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacac 276  Q
    ||||||||||  |||||||||||||||||||| |||||| || |||||||||||||||||||| ||||| ||||| |||||    
T  13845229 acaccgacacaaataataatttgagaaaatgatataatttagagtaatcataggtgtcgtgtctgtgtcggtgtcggacac 13845309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 39820433 - 39820488
Alignment:
Q  205 cgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcgg 260  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  39820433 cgtataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcgg 39820488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 35431202 - 35431140
Alignment:
Q  198 accgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcgg 260  Q
    ||||| ||| |||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  35431202 accgaaacggataataatttgagaaaatgacatattttagtgtaatcataggtgtcgtgtcgg 35431140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 260
Target Start/End: Original strand, 1676711 - 1676771
Alignment:
Q  200 cgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcgg 260  Q
    ||||||| ||||||||||| |||||||||||| || |||||||||||||||||||||||||    
T  1676711 cgacacggataataatttgtgaaaatgacatattttagtgtaatcataggtgtcgtgtcgg 1676771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 28883935 - 28883880
Alignment:
Q  203 cacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtc 258  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  28883935 cacgaataataatttgagaaaatgacataattcagtggaatcataggtgtcttgtc 28883880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 30068087 - 30068028
Alignment:
Q  201 gacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcgg 260  Q
    |||||| ||||||||||||||||||||||||||||||| ||||| |||||| || |||||    
T  30068087 gacacggataataatttgagaaaatgacataattcagtataatcgtaggtgccgagtcgg 30068028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 14513226 - 14513168
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcag 266  Q
    |||||||||||||||||| ||||||||||| |||||||||| | | |||||||||||||    
T  14513226 ataataatttgagaaaattacataattcagcgtaatcatagatttggtgtcggtgtcag 14513168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 16869765 - 16869699
Alignment:
Q  210 aataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacac 276  Q
    |||||||| |||||||||||||||||| | ||||||| |||||||||| |||||| ||||| |||||    
T  16869765 aataatttaagaaaatgacataattcactataatcattggtgtcgtgttggtgtcggtgtcggacac 16869699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 257
Target Start/End: Original strand, 3658146 - 3658203
Alignment:
Q  200 cgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgt 257  Q
    ||||||| |||||||||||||||||| |  || |||||||||||||||||||||||||    
T  3658146 cgacacggataataatttgagaaaataatgtagttcagtgtaatcataggtgtcgtgt 3658203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 3025559 - 3025603
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||    
T  3025559 taataatttgagaaaatcacataattcagtgtaattataggtgtc 3025603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 26915300 - 26915236
Alignment:
Q  200 cgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    ||||||| |||| | |||||||||||||||||||| | |||||||| | ||||||||||||||||    
T  26915300 cgacacggataaaattttgagaaaatgacataatttaatgtaatcacaagtgtcgtgtcggtgtc 26915236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 8017493 - 8017548
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgt 263  Q
    |||||||| ||| |||||||||||||| ||||||||||||| ||||||||| ||||    
T  8017493 ataataatatgaaaaaatgacataattgagtgtaatcatagatgtcgtgtcagtgt 8017548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 12559157 - 12559119
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcata 247  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  12559157 taataatttgagaaaatgatataattcagtgtaatcata 12559119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 12985392 - 12985438
Alignment:
Q  201 gacacgtataataatttgagaaaatgacataattcagtgtaatcata 247  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  12985392 gacacctataataatttgagaaaatcacataattcaatgtaatcata 12985438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 29198530 - 29198492
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcata 247  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  29198530 taataatttgagaaaatgacataattcaatgtaatcata 29198492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 34897093 - 34897138
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  34897093 taataatttgagaaaatcacataattcagtgtaattatatgtgtcg 34897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 252
Target Start/End: Original strand, 3508059 - 3508103
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    |||||||||||||||||| |||||||||| |||||||||| ||||    
T  3508059 ataataatttgagaaaataacataattcaatgtaatcatatgtgt 3508103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 280
Target Start/End: Original strand, 3911117 - 3911189
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacaccgac 280  Q
    ||||| |||| | ||||| ||||||||||||| ||||||| ||||||||| |||||| || || |||||||||    
T  3911117 ataatcatttaataaaatcacataattcagtgaaatcataagtgtcgtgttggtgtcggtatcggacaccgac 3911189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 26609812 - 26609756
Alignment:
Q  213 aatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgt 269  Q
    ||||||| ||||||| |||| |||||||||| ||||||| | |||||||||||||||    
T  26609812 aatttgaaaaaatgatataactcagtgtaattataggtgacatgtcggtgtcagtgt 26609756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 36162826 - 36162771
Alignment:
Q  45 agaagaagaaaaggggaagacttttgatagcattctcaatcaggtagtagatccgtt 101  Q
    ||||||||||||||| |||| ||||||||||||||||| ||||||| ||||| ||||    
T  36162826 agaagaagaaaaggg-aagatttttgatagcattctcattcaggtactagattcgtt 36162771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 4611529 - 4611576
Alignment:
Q  196 acaccgacacgtataataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||   ||||||||||||||||| |||||||||||||||||    
T  4611529 acaccgacaccgctaataatttgagaaaataacataattcagtgtaat 4611576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 34201098 - 34201063
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||||||||||||||| ||||||    
T  34201098 ataataatttgagaaaatgacataattcaatgtaat 34201063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 247
Target Start/End: Complemental strand, 37225795 - 37225756
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcata 247  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  37225795 ataataatttgagaaaataacataattcaatgtaatcata 37225756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 7658471 - 7658505
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||| |||||||||||||||||    
T  7658471 taataatttgagaaaattacataattcagtgtaat 7658505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 13203649 - 13203683
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||| |||||||||||||||||    
T  13203649 taataatttgagaaaattacataattcagtgtaat 13203683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 14134707 - 14134741
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||| |||||||||||||||||    
T  14134707 taataatttgagaaaatcacataattcagtgtaat 14134741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 14692467 - 14692512
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||    
T  14692467 ataataatttgagaaa-tgacataattcagtgtaactataggtgtcg 14692512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 247
Target Start/End: Original strand, 18646180 - 18646218
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcata 247  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  18646180 taataatttgaaaaaatgacatgattcagtgtaatcata 18646218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 33382071 - 33382025
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||| ||||||||||||||||||| ||||| ||| ||||||    
T  33382071 ataataatttaagaaaatgacataattcagagtaattatatgtgtcg 33382025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 4786389 - 4786344
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||| ||||||| ||||||||||||||||| ||| ||||||    
T  4786389 taataatttaagaaaatcacataattcagtgtaattatatgtgtcg 4786344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 11927137 - 11927092
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||| ||||| ||||||||||||||||| ||| ||||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtgtcg 11927092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 13844647 - 13844602
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| |||||||| |||||||| ||| ||||||    
T  13844647 taataatttgagaaaatcacataattgagtgtaattatatgtgtcg 13844602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 20679446 - 20679401
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| ||||| ||||||||||| ||| ||||||    
T  20679446 taataatttgagaaaatcacatagttcagtgtaattataagtgtcg 20679401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 31236628 - 31236583
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| |||||||||| |||||| ||| ||||||    
T  31236628 taataatttgagaaaatcacataattcaatgtaattatatgtgtcg 31236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 40332200 - 40332233
Alignment:
Q  210 aataatttgagaaaatgacataattcagtgtaat 243  Q
    |||||||||||||||| |||||||||||||||||    
T  40332200 aataatttgagaaaatcacataattcagtgtaat 40332233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 10441213 - 10441245
Alignment:
Q  211 ataatttgagaaaatgacataattcagtgtaat 243  Q
    |||||||||||||||||||||||||| ||||||    
T  10441213 ataatttgagaaaatgacataattcaatgtaat 10441245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 280
Target Start/End: Complemental strand, 18130596 - 18130513
Alignment:
Q  196 acaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacaccgac 280  Q
    ||||||||||  ||||||| |||||||||||| | |||| ||||||| || ||||||| ||| |||  |||| ||||||||||||    
T  18130596 acaccgacacagataataagttgagaaaatgatacaattaagtgtaaccagaggtgtcatgttggt-acagtatcagacaccgac 18130513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 24362253 - 24362209
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    ||||||||||||| ||| ||||||||||||||||| ||| |||||    
T  24362253 taataatttgagagaatcacataattcagtgtaattatatgtgtc 24362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 28819198 - 28819266
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacac 276  Q
    ||||||||||||||||||| ||||| ||| || ||||||| ||||||  |  ||||| |||||||||||    
T  28819198 ataataatttgagaaaatggcataactcaatgcaatcatatgtgtcggttttgtgtcggtgtcagacac 28819266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 29510270 - 29510230
Alignment:
Q  299 gggacacacctaatccaagaagtgttcgtgcttcataggtt 339  Q
    |||||||||||||||| || ||||| |||||||||||||||    
T  29510270 gggacacacctaatccgaggagtgtccgtgcttcataggtt 29510230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 336
Target Start/End: Complemental strand, 34127208 - 34127172
Alignment:
Q  300 ggacacacctaatccaagaagtgttcgtgcttcatag 336  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  34127208 ggacacacctaatccaaggagtgtccgtgcttcatag 34127172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 43554520 - 43554584
Alignment:
Q  200 cgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  43554520 cgacacgtataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtc 43554584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 278
Target Start/End: Complemental strand, 18607161 - 18607079
Alignment:
Q  196 acaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacaccg 278  Q
    ||||||||| | |||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||  ||||| |||||||    
T  18607161 acaccgacatggataataatttgagaaaataacataattcaatgtaatcataggtgtcgtgtctgtgttggtgtccgacaccg 18607079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 39696065 - 39695995
Alignment:
Q  194 cgacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    ||||||||||||  | |||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  39696065 cgacaccgacaccgacaataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtc 39695995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 5468030 - 5467973
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtca 265  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||    
T  5468030 ataataatttgataaaatcacataattcagtgtaattataggtgtcgtgtcggtgtca 5467973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 26205805 - 26205756
Alignment:
Q  215 tttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26205805 tttgagaaaatgacataattcagtgtaatcataggtgtcgtgttggtgtc 26205756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 31264446 - 31264495
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtc 258  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31264446 taataatttgagaaaatgacataattcagtgtaatcataagtgtcgtgtc 31264495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 25863203 - 25863267
Alignment:
Q  200 cgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    ||||| |||||||||||||||||||||| ||||||||||||||| ||| |||||||||| |||||    
T  25863203 cgacatgtataataatttgagaaaatgatataattcagtgtaattataagtgtcgtgtcagtgtc 25863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 21137697 - 21137749
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggt 261  Q
    ||||||| |||||||||||| |||||||||| |||||||||||||||||||||    
T  21137697 taataatctgagaaaatgacgtaattcagtgaaatcataggtgtcgtgtcggt 21137749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 42469219 - 42469270
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggt 250  Q
    |||||||| |||||||||||||||||||||||| || |||||||||||||||    
T  42469219 ccgacacggataataatttgagaaaatgacatattttagtgtaatcataggt 42469270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 7997224 - 7997166
Alignment:
Q  202 acacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcgg 260  Q
    ||||| |||||||||||||||||||| ||||| ||||||||| ||| ||||||||||||    
T  7997224 acacggataataatttgagaaaatgatataatacagtgtaattataagtgtcgtgtcgg 7997166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 2577242 - 2577193
Alignment:
Q  198 accgacacgtataataatttgagaaaatgacataattcagtgtaatcata 247  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||||||||    
T  2577242 accgacaccgataataatttgagaaaatgacataatttagtgtaatcata 2577193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 18288110 - 18288053
Alignment:
Q  201 gacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtc 258  Q
    |||||| ||||||||||||||||||||| ||| ||||| |||||||||||||| ||||    
T  18288110 gacacggataataatttgagaaaatgacttaactcagtataatcataggtgtcatgtc 18288053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 28588725 - 28588680
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||    
T  28588725 taataatttgagaaaatcacataattcagtgtaattataggtgtcg 28588680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 2548394 - 2548440
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||    
T  2548394 ataataattagagaaaattacataattcagtgtaatcataagtgtcg 2548440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 4344749 - 4344787
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcat 246  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  4344749 ataataatttgaaaaaatgacataattcagtgtaatcat 4344787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 11596507 - 11596469
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcat 246  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  11596507 ataataatttgagaaaatgacataattcaatgtaatcat 11596469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 18162055 - 18162097
Alignment:
Q  201 gacacgtataataatttgagaaaatgacataattcagtgtaat 243  Q
    |||||| |||||||||| |||||||||||||||||||||||||    
T  18162055 gacacggataataatttaagaaaatgacataattcagtgtaat 18162097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 18586340 - 18586291
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtc 258  Q
    |||||||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  18586340 ataataatttga-aaaatgacataatacagtgtaattataggtgtcgtgtc 18586291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 6471954 - 6471897
Alignment:
Q  195 gacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    ||||| ||||||  ||||||||||||||||| ||||||||||||||||| ||| ||||    
T  6471954 gacactgacacggctaataatttgagaaaatcacataattcagtgtaattatatgtgt 6471897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 23016040 - 23015995
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||| |||||||||||| ||||||||||||||||| ||||||||||    
T  23016040 taatcatttgagaaaatcacataattcagtgtaattataggtgtcg 23015995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 276
Target Start/End: Original strand, 3966511 - 3966578
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtc-gtgtcggtgtcagtgtcagacac 276  Q
    ||||||||||||||||| ||| ||||||||||||| ||| ||||| ||||| ||||||||||| |||||    
T  3966511 taataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtc-gtgtcagtgtcggacac 3966578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 21194253 - 21194213
Alignment:
Q  212 taatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  21194253 taatttgagaaaatcacataattcagtgtaatcattggtgt 21194213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 252
Target Start/End: Original strand, 28296335 - 28296379
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    ||||||||||||||||||||||||||||| |||| ||||| ||||    
T  28296335 ataataatttgagaaaatgacataattcaatgtactcatatgtgt 28296379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 2419851 - 2419902
Alignment:
Q  195 gacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcat 246  Q
    ||||| |||||  |||||||||||||||||| ||| ||||||||||||||||    
T  2419851 gacacggacactgataataatttgagaaaattacacaattcagtgtaatcat 2419902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 251
Target Start/End: Complemental strand, 21577160 - 21577117
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtg 251  Q
    |||||||||||||||||| |||||||| |||||||| |||||||    
T  21577160 ataataatttgagaaaataacataattaagtgtaataataggtg 21577117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 24906353 - 24906318
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaat 243  Q
    |||||||||||| |||||||||||||||||||||||    
T  24906353 ataataatttgaaaaaatgacataattcagtgtaat 24906318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 37472649 - 37472598
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcg 259  Q
    ||||||||| ||||||||||||||||||  | |||||||| |||||||||||    
T  37472649 ataataattcgagaaaatgacataattcgatataatcatatgtgtcgtgtcg 37472598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 43208322 - 43208287
Alignment:
Q  212 taatttgagaaaatgacataattcagtgtaatcata 247  Q
    ||||||||||||||||||||||||| ||||||||||    
T  43208322 taatttgagaaaatgacataattcaatgtaatcata 43208287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 19737534 - 19737488
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||||||||| |||||||||| || ||||||| ||||||    
T  19737534 ataataatttgagaaaattacataattcaatgcaatcatatgtgtcg 19737488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 27932243 - 27932277
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||| |||||||||||||||||    
T  27932243 taataatttgagaaaattacataattcagtgtaat 27932277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 2039900 - 2039863
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcat 246  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  2039900 taataatttgagaaaatgacatgattcaatgtaatcat 2039863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 14574110 - 14574046
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    ||||||||  |||||||||||  |||||| ||||||||||||||| |||||| ||||||| |||||    
T  14574110 ccgacacgagtaataatttgatgaaatgatataattcagtgtaattataggt-tcgtgtcagtgtc 14574046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 30098334 - 30098379
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| |||||||||| |||||| |||| |||||    
T  30098334 taataatttgagaaaatcacataattcaatgtaattatagatgtcg 30098379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 30502439 - 30502394
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| || |||||||||||||| ||| ||||||    
T  30502439 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 30502394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 30542782 - 30542737
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| || |||||||||||||| ||| ||||||    
T  30542782 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 30542737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 36838551 - 36838596
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| |||||||| |||||||| ||| ||||||    
T  36838551 taataatttgagaaaattacataatttagtgtaattatatgtgtcg 36838596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 41091308 - 41091263
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||| |||||||||||| ||||||||||||||||| ||| ||||||    
T  41091308 taatgatttgagaaaatcacataattcagtgtaattatatgtgtcg 41091263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 6247620 - 6247664
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||| | ||||||||||| ||||| |||||||||||||||||    
T  6247620 ccgacacatctaataatttgaaaaaatcacataattcagtgtaat 6247664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 6247692 - 6247732
Alignment:
Q  299 gggacacacctaatccaagaagtgttcgtgcttcataggtt 339  Q
    |||||||||||||||| ||||||||  ||||||||||||||    
T  6247692 gggacacacctaatccgagaagtgtctgtgcttcataggtt 6247732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 12594759 - 12594711
Alignment:
Q  232 attcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacaccgac 280  Q
    ||||| ||||||||||| | ||||||| ||||||||||| |||||||||    
T  12594759 attcaatgtaatcatagatatcgtgtctgtgtcagtgtctgacaccgac 12594711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 252
Target Start/End: Complemental strand, 19293475 - 19293431
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    |||||||||| ||||||| |||||||| |||||||||||| ||||    
T  19293475 ataataatttaagaaaataacataattaagtgtaatcatatgtgt 19293431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 19438353 - 19438385
Alignment:
Q  211 ataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||| |||||||||||||||||    
T  19438353 ataatttgagaaaatcacataattcagtgtaat 19438385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 252
Target Start/End: Complemental strand, 38749615 - 38749571
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    |||||||||||| |||||||||||||||| |||||| ||| ||||    
T  38749615 ataataatttgaaaaaatgacataattcaatgtaattatatgtgt 38749571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 41558735 - 41558707
Alignment:
Q  208 ataataatttgagaaaatgacataattca 236  Q
    |||||||||||||||||||||||||||||    
T  41558735 ataataatttgagaaaatgacataattca 41558707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 42005011 - 42004943
Alignment:
Q  196 acaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  42005011 acacagacacggataataatttgagaaaatgacataatttagtgtaatcataggtgttgtgtcggtgtc 42004943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 40747838 - 40747769
Alignment:
Q  195 gacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| ||| ||||||    
T  40747838 gacaccgacacggataataatttgagaaaatgacataattcaatgtaattataggtgtcatgttggtgtc 40747769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 39101247 - 39101179
Alignment:
Q  195 gacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgt 263  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||||||| ||||||||||| |||||||    
T  39101247 gacaccgacacatataataatttgagaaaataacataattaagtgtaattataggtgtcgtttcggtgt 39101179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 6936458 - 6936396
Alignment:
Q  202 acacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc 264  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||    
T  6936458 acacggataataatctgagaaaatgacataattaagtgtaatcataggtgtcgtgtctgtgtc 6936396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 21145466 - 21145528
Alignment:
Q  201 gacacgtataataatttgagaaaa-tgacataattcagtgtaatcataggtgtcgtgtcggtg 262  Q
    |||||| |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  21145466 gacacggataataatttgaaaaaaatgacataattcagtgtaatcataggcgtcgtgtcggtg 21145528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 6573983 - 6574047
Alignment:
Q  195 gacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcg 259  Q
    |||||||||||| || ||||||||||| ||||| |||||| ||||||||||||||||| ||||||    
T  6573983 gacaccgacacggatgataatttgagacaatgatataatttagtgtaatcataggtgttgtgtcg 6574047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 22794136 - 22794080
Alignment:
Q  202 acacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtc 258  Q
    ||||| |||||||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  22794136 acacggataataatttgaaaaaatgacataatacagtgtaattataggtgtcgtgtc 22794080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 23440003 - 23440051
Alignment:
Q  194 cgacaccgacacgtataataatttgagaaaatgacataattcagtgtaa 242  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  23440003 cgacaccgacacgtataataatttgagaaaatgatataatttagtgtaa 23440051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 17831582 - 17831514
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacaccgac 280  Q
    ||||||||||||||||| |||| |||||||||||||||| |||||||    ||||||||||| |||||||||    
T  17831582 taataatttgagaaaatcacattattcagtgtaatcatatgtgtcgt---cgtgtcagtgtcggacaccgac 17831514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 36878469 - 36878514
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||    
T  36878469 taataatttgagaaaatcacataattcagtgtaattataggtgtcg 36878514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 11412833 - 11412774
Alignment:
Q  195 gacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||| |||||  |||||||| |||||||||||||||||||| ||| |||||||||||||    
T  11412833 gacacggacaccgataataatatgagaaaatgacataattcaatgtgatcataggtgtcg 11412774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 11634190 - 11634127
Alignment:
Q  195 gacaccgacac-gtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgt 257  Q
    ||||||||||| | |||||||||||||||||  |||||||| | ||||||||||||||||||||    
T  11634190 gacaccgacaccggataataatttgagaaaacaacataatttaatgtaatcataggtgtcgtgt 11634127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 1864944 - 1864886
Alignment:
Q  196 acaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||   ||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  1864944 acaccgacacagttaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 1864886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 3921674 - 3921712
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcat 246  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  3921674 ataataatttgagaaaatgacataattcaatgtaatcat 3921712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 24176419 - 24176373
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||||||||| |||| |||||||||||| ||||||||||    
T  24176419 ataataatttgagaaaataacatcattcagtgtaattataggtgtcg 24176373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 242
Target Start/End: Original strand, 42325567 - 42325601
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaa 242  Q
    |||||||||||||||||||||||||||||||||||    
T  42325567 ataataatttgagaaaatgacataattcagtgtaa 42325601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 20157401 - 20157356
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  20157401 taataatgtgagaaaatcacataattcagtgtaatcatatgtgtcg 20157356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 40259011 - 40258950
Alignment:
Q  182 gctattaagcaccgacaccgacacgtataataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||| |||||| |||||||||||   ||||||||||| ||||| |||||||||||||||||    
T  40259011 gctatgaagcacggacaccgacacaattaataatttgaaaaaatcacataattcagtgtaat 40258950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 398816 - 398772
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    ||||||||||| ||||| ||||||||||||||||| |||||||||    
T  398816 taataatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 7918262 - 7918218
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||    
T  7918262 taataatttgagaaaatcacataattcagtgtaattatatgtgtc 7918218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 244
Target Start/End: Original strand, 11571592 - 11571628
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatc 244  Q
    ||||||||||||||||||||||||||||| |||||||    
T  11571592 ataataatttgagaaaatgacataattcaatgtaatc 11571628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 30847771 - 30847727
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    ||||||||||| |||||||||||||||| |||||||||| |||||    
T  30847771 taataatttgaaaaaatgacataattcaatgtaatcatatgtgtc 30847727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 254
Target Start/End: Original strand, 2445880 - 2445923
Alignment:
Q  211 ataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||||||||||||||||| | |||||||| ||||||    
T  2445880 ataatttgagaaaatgacataattcaatttaatcatatgtgtcg 2445923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 10233261 - 10233324
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtc-gtgtcggtgtcagtgtca 271  Q
    |||||| |||||||||| ||||||||||||||||| ||| ||||| |||| |||||| ||||||    
T  10233261 taataaattgagaaaatcacataattcagtgtaattatatgtgtctgtgttggtgtcggtgtca 10233324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 260
Target Start/End: Complemental strand, 12443511 - 12443460
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcgg 260  Q
    ||||||||||||||||| |||||||||||||||||  || ||| ||||||||    
T  12443511 taataatttgagaaaatcacataattcagtgtaattgtatgtgacgtgtcgg 12443460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 34298431 - 34298478
Alignment:
Q  196 acaccgacacgtataataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||   ||||||||||||||||| |||||||||||||||||    
T  34298431 acaccgacaccactaataatttgagaaaatcacataattcagtgtaat 34298478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 254
Target Start/End: Original strand, 44482240 - 44482283
Alignment:
Q  211 ataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||| ||||||||||||||||| ||| ||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcg 44482283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 373054 - 373100
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||||||||| ||| ||| |||||||| ||||||    
T  373054 ataataatttgagaaaatgacatgatttagtttaatcatatgtgtcg 373100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 16812538 - 16812588
Alignment:
Q  196 acaccgacacgtataataatttgagaaaatgacataattcagtgtaatcat 246  Q
    ||||||||||  |||||||||||| ||||| ||||||||||||| ||||||    
T  16812538 acaccgacaccaataataatttgacaaaatcacataattcagtggaatcat 16812588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 19637775 - 19637821
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||| |||||||||||| ||||| |||||||||| ||||||    
T  19637775 ataataatttaagaaaatgacattattcaatgtaatcatatgtgtcg 19637821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 247
Target Start/End: Original strand, 21038091 - 21038129
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcata 247  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  21038091 taataatttaagaaaattacataattcagtgtaatcata 21038129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 25361896 - 25361938
Alignment:
Q  211 ataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    ||||||||||||||| ||||||||||||||||| ||| |||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtc 25361938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Complemental strand, 26238163 - 26238129
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||| |||||||||||||||||    
T  26238163 taataatttgagaaaataacataattcagtgtaat 26238129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 31015051 - 31015085
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||| |||||||||||||||||    
T  31015051 taataatttgagaaaatcacataattcagtgtaat 31015085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 40181879 - 40181913
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||| |||||||||||||||||    
T  40181879 taataatttgagaaaatcacataattcagtgtaat 40181913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 1486760 - 1486715
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||| ||||| ||||||||||||||||| ||| ||||||    
T  1486760 taataatttgaaaaaatcacataattcagtgtaattataagtgtcg 1486715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 17080945 - 17080896
Alignment:
Q  196 acaccgacacgtataataatttgagaaaatgacataattcagtgtaatca 245  Q
    ||||||||||  |||||||||||||||||| |||||||| | ||||||||    
T  17080945 acaccgacaccaataataatttgagaaaataacataattgaatgtaatca 17080896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 25098604 - 25098563
Alignment:
Q  211 ataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    ||||||||||||||| ||||||||||||||||| ||| ||||    
T  25098604 ataatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 32461430 - 32461393
Alignment:
Q  299 gggacacacctaatccaagaagtgttcgtgcttcatag 336  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  32461430 gggacacgcctaatccaagaagtgtccgtgcttcatag 32461393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 33313532 - 33313483
Alignment:
Q  213 aatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtg 262  Q
    ||||||||||||| |||||||||| |||||||| | |||| |||||||||    
T  33313532 aatttgagaaaataacataattcattgtaatcagaagtgtagtgtcggtg 33313483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 38076021 - 38075976
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||| |||| |||||| |||||||||||||| ||||||    
T  38076021 taataatttgagtaaatcacataagtcagtgtaatcatatgtgtcg 38075976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 40285705 - 40285660
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||||||||  |||||||||||||| ||||| ||||||    
T  40285705 taataatttgagaaaatcgcataattcagtgtagtcatatgtgtcg 40285660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 44296545 - 44296501
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||    
T  44296545 taataatttgagaaaatgacataatttagt-taatcatatgtgtcg 44296501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 49872929 - 49872966
Alignment:
Q  302 acacacctaatccaagaagtgttcgtgcttcataggtt 339  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  49872929 acacacctaacacaagaagtgttcgtgcttcataggtt 49872966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 340
Target Start/End: Original strand, 1209836 - 1209876
Alignment:
Q  300 ggacacacctaatccaagaagtgttcgtgcttcataggttc 340  Q
    ||||||||||||||| ||||||||||||||||  |||||||    
T  1209836 ggacacacctaatccgagaagtgttcgtgctttgtaggttc 1209876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 2896172 - 2896140
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgta 241  Q
    ||||||||||||||||| |||||||||||||||    
T  2896172 taataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 252
Target Start/End: Complemental strand, 7988503 - 7988459
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgt 252  Q
    |||||||||| ||||| |||||||||||| |||||||||| ||||    
T  7988503 ataataatttaagaaagtgacataattcaatgtaatcataagtgt 7988459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 276
Target Start/End: Original strand, 9828052 - 9828119
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtc-gtgtcggtgtcagtgtcagacac 276  Q
    ||||||||||| ||||| |||||||||||||||||  || ||||| ||||| ||||| |||||||||||    
T  9828052 taataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtc-gtgtccgtgtcagacac 9828119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 14332420 - 14332452
Alignment:
Q  213 aatttgagaaaatgacataattcagtgtaatca 245  Q
    |||||||||||||||||||||||| ||||||||    
T  14332420 aatttgagaaaatgacataattcaatgtaatca 14332452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 17705626 - 17705586
Alignment:
Q  220 gaaaatgacataattcagtgtaatcataggtgtcgtgtcgg 260  Q
    |||||| ||||||||||||||||| ||| ||||||||||||    
T  17705626 gaaaatcacataattcagtgtaattatatgtgtcgtgtcgg 17705586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 19324572 - 19324604
Alignment:
Q  211 ataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||| |||||||||||||||||    
T  19324572 ataatttgagaaaatcacataattcagtgtaat 19324604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 34712434 - 34712390
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    ||||||||||||||||| |||||||| |||||||| ||| |||||    
T  34712434 taataatttgagaaaataacataatttagtgtaattatatgtgtc 34712390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 45660835 - 45660779
Alignment:
Q  194 cgacaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggt 250  Q
    ||||| ||||||  ||||||||||||||| ||| ||||||| | |||||||||||||    
T  45660835 cgacatcgacaccaataataatttgagaatatgtcataattgaatgtaatcataggt 45660779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 208 - 280
Target Start/End: Complemental strand, 8105 - 8033
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacaccgac 280  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||||| |||| ||||    
T  8105 ataataatttgagaaaatgacataattcagtgtaaacataggtatcgtgtcggtttcggtgtcggacatcgac 8033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 260
Target Start/End: Original strand, 1948 - 2008
Alignment:
Q  200 cgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcgg 260  Q
    ||||||| ||||||||||| |||||||||||| || |||||||||||||||||||||||||    
T  1948 cgacacggataataatttgtgaaaatgacatattttagtgtaatcataggtgtcgtgtcgg 2008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 199 - 334
Target Start/End: Complemental strand, 225329 - 225199
Alignment:
Q  199 ccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacaccgaccgatgtgtgttcgacatg 298  Q
    |||||||  |||||||||||||||||||||||||| || |||||| ||| ||||||||| |||||| ||||| ||||| |||    | ||||||||||      
T  225329 ccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtcgtgttggtgtc-gtgtcggacactgac----gcgtgttcgacacc 225235  T
Q  299 gggacacacctaatccaagaagtgttcgtgcttcat 334  Q
     |||||| |||||| | || ||||| ||||||||||    
T  225234 aggacacgcctaattcgaggagtgtccgtgcttcat 225199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 56932 - 56974
Alignment:
Q  211 ataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    ||||||||||||||||| ||||||||||||||||||| |||||    
T  56932 ataatttgagaaaatgatataattcagtgtaatcataagtgtc 56974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 26005 - 26050
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtc 253  Q
    |||||||| |||||||||||||| |||||||| |||||||||||||    
T  26005 ataataatgtgagaaaatgacatgattcagtgcaatcataggtgtc 26050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 53189 - 53233
Alignment:
Q  210 aataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcg 53233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 276
Target Start/End: Complemental strand, 263423 - 263356
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtc-gtgtcggtgtcagtgtcagacac 276  Q
    ||||||||||||||||  ||||||||||||||||| ||| ||||| ||||| ||||| |||||||||||    
T  263423 taataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtc-gtgtcggtgtcagacac 263356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 240074 - 240027
Alignment:
Q  207 tataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||||| | |||||||| |||||||||| ||||||    
T  240074 tataataatttgagaaaataatataattcaatgtaatcatatgtgtcg 240027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 135376 - 135318
Alignment:
Q  196 acaccgacacgtataataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||   ||||||||||||||||| ||||||||| ||||||| ||| ||||||    
T  135376 acaccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcg 135318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 92815 - 92849
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaat 243  Q
    ||||||||||||||||| |||||||||||||||||    
T  92815 taataatttgagaaaattacataattcagtgtaat 92849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 245
Target Start/End: Original strand, 7697 - 7734
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatca 245  Q
    ||||||||||||||||||||||||||||| || |||||    
T  7697 ataataatttgagaaaatgacataattcaatgcaatca 7734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 44572 - 44531
Alignment:
Q  213 aatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  44572 aatttgagaaaatcacataattcagtgtaattatatgtgtcg 44531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 70286 - 70331
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||| ||||| ||||||||||||||||| ||| ||||||    
T  70286 taataatttgaaaaaataacataattcagtgtaattataagtgtcg 70331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 9798 - 9753
Alignment:
Q  209 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 254  Q
    ||||||||||||||||| || |||||||||||||| ||| ||||||    
T  9798 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 9753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 4413 - 4461
Alignment:
Q  208 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtg 256  Q
    |||||||||| |||| |||| |||||||||||| ||||||| |||||||    
T  4413 ataataatttaagaatatgatataattcagtgtcatcatagatgtcgtg 4461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 102887 - 102947
Alignment:
Q  183 ctattaagcaccgacaccgacacgtataataatttgagaaaatgacataattcagtgtaat 243  Q
    |||| ||||||| ||||| |||   |||||||||||||||||||| |||||||| ||||||    
T  102887 ctatcaagcacccacaccaacatcgataataatttgagaaaatgatataattcaatgtaat 102947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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