View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20217_high_6 (Length: 267)

Name: NF20217_high_6
Description: NF20217
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20217_high_6
NF20217_high_6
[»] chr2 (37 HSPs)
chr2 (19-99)||(38385847-38385927)
chr2 (143-200)||(22535681-22535739)
chr2 (143-188)||(30180879-30180924)
chr2 (143-184)||(35337133-35337174)
chr2 (143-201)||(38385935-38385993)
chr2 (145-188)||(40321442-40321485)
chr2 (143-200)||(12028199-12028257)
chr2 (143-185)||(24951921-24951963)
chr2 (143-200)||(28149664-28149722)
chr2 (154-184)||(30371605-30371635)
chr2 (143-200)||(34428863-34428921)
chr2 (145-183)||(38358286-38358324)
chr2 (220-250)||(38386231-38386261)
chr2 (143-184)||(42794325-42794367)
chr2 (143-188)||(43015198-43015244)
chr2 (110-147)||(85688-85725)
chr2 (143-184)||(8214558-8214598)
chr2 (144-177)||(15482333-15482366)
chr2 (156-185)||(27199137-27199166)
chr2 (156-185)||(27854564-27854593)
chr2 (143-184)||(29640781-29640822)
chr2 (143-184)||(34635940-34635981)
chr2 (143-200)||(37200348-37200405)
chr2 (110-147)||(37200348-37200385)
chr2 (143-184)||(40385261-40385302)
chr2 (143-184)||(44610945-44610986)
chr2 (164-200)||(85689-85725)
chr2 (143-183)||(8467226-8467266)
chr2 (156-188)||(18048830-18048862)
chr2 (143-201)||(18701551-18701611)
chr2 (146-201)||(25926888-25926944)
chr2 (153-200)||(25927129-25927177)
chr2 (156-184)||(28110271-28110299)
chr2 (143-194)||(29098026-29098078)
chr2 (156-184)||(30180765-30180793)
chr2 (145-181)||(32449918-32449954)
chr2 (156-201)||(37147796-37147843)
[»] chr8 (22 HSPs)
chr8 (111-200)||(40652621-40652709)
chr8 (157-200)||(43945397-43945440)
chr8 (143-200)||(4105277-4105335)
chr8 (143-184)||(38132059-38132100)
chr8 (156-200)||(40770532-40770576)
chr8 (143-201)||(38500511-38500570)
chr8 (143-200)||(34985320-34985378)
chr8 (143-184)||(3912275-3912316)
chr8 (110-147)||(4105298-4105335)
chr8 (143-184)||(5643022-5643063)
chr8 (143-184)||(5644963-5645004)
chr8 (143-184)||(11105789-11105830)
chr8 (143-184)||(11105947-11105988)
chr8 (143-184)||(21692417-21692458)
chr8 (143-184)||(24971175-24971216)
chr8 (110-147)||(38500532-38500569)
chr8 (153-200)||(27987534-27987582)
chr8 (153-200)||(28044836-28044884)
chr8 (156-188)||(33331812-33331844)
chr8 (110-146)||(40652673-40652709)
chr8 (145-200)||(43400672-43400728)
chr8 (110-146)||(43945404-43945440)
[»] chr7 (27 HSPs)
chr7 (143-201)||(44414076-44414134)
chr7 (143-200)||(16902335-16902392)
chr7 (143-184)||(21443884-21443925)
chr7 (145-200)||(24555901-24555957)
chr7 (143-184)||(24478042-24478083)
chr7 (143-184)||(39065401-39065442)
chr7 (153-200)||(5909714-5909762)
chr7 (143-200)||(19979652-19979711)
chr7 (143-200)||(38193191-38193250)
chr7 (143-201)||(48104509-48104568)
chr7 (143-200)||(1693449-1693507)
chr7 (143-184)||(15994755-15994797)
chr7 (143-200)||(48104726-48104784)
chr7 (143-184)||(8603741-8603782)
chr7 (110-147)||(16902355-16902392)
chr7 (143-184)||(22335516-22335557)
chr7 (144-200)||(23371450-23371507)
chr7 (144-200)||(23784585-23784642)
chr7 (143-188)||(25622149-25622193)
chr7 (143-188)||(32199840-32199885)
chr7 (143-184)||(35097607-35097648)
chr7 (143-184)||(38192874-38192915)
chr7 (110-147)||(48104510-48104547)
chr7 (157-200)||(10688459-10688503)
chr7 (156-184)||(12814816-12814844)
chr7 (144-184)||(30335381-30335421)
chr7 (110-146)||(44414097-44414133)
[»] chr5 (22 HSPs)
chr5 (143-185)||(12330871-12330913)
chr5 (152-194)||(21148808-21148850)
chr5 (143-182)||(13924344-13924383)
chr5 (143-188)||(13012624-13012668)
chr5 (156-200)||(21149112-21149156)
chr5 (143-200)||(33659103-33659162)
chr5 (147-182)||(20698522-20698557)
chr5 (143-200)||(10976745-10976803)
chr5 (143-185)||(28593522-28593564)
chr5 (143-184)||(711256-711297)
chr5 (143-184)||(4414214-4414255)
chr5 (156-185)||(9227095-9227124)
chr5 (143-184)||(16920654-16920695)
chr5 (110-147)||(21149119-21149156)
chr5 (156-193)||(26035095-26035132)
chr5 (143-184)||(31312505-31312546)
chr5 (143-184)||(31601767-31601808)
chr5 (143-184)||(42119285-42119326)
chr5 (156-188)||(18805401-18805433)
chr5 (153-200)||(31861492-31861540)
chr5 (143-183)||(31920343-31920383)
chr5 (153-200)||(36992991-36993039)
[»] chr4 (32 HSPs)
chr4 (145-199)||(54130364-54130418)
chr4 (153-188)||(16482292-16482327)
chr4 (143-200)||(51396160-51396218)
chr4 (143-200)||(51965373-51965431)
chr4 (143-188)||(53231787-53231833)
chr4 (143-184)||(35370386-35370427)
chr4 (143-184)||(36405851-36405892)
chr4 (143-200)||(11563514-11563573)
chr4 (157-188)||(17696394-17696425)
chr4 (143-182)||(31592743-31592782)
chr4 (143-188)||(12144777-12144823)
chr4 (153-183)||(21780363-21780393)
chr4 (155-200)||(35539790-35539836)
chr4 (155-200)||(50727591-50727637)
chr4 (155-200)||(50735605-50735651)
chr4 (143-200)||(1386035-1386092)
chr4 (143-184)||(18320693-18320734)
chr4 (143-184)||(22854280-22854321)
chr4 (156-200)||(24215752-24215797)
chr4 (143-184)||(27579532-27579573)
chr4 (144-188)||(56467429-56467474)
chr4 (143-200)||(5401995-5402054)
chr4 (156-188)||(12388099-12388131)
chr4 (156-184)||(13334841-13334869)
chr4 (156-184)||(15157078-15157106)
chr4 (156-184)||(21798351-21798379)
chr4 (156-188)||(23981362-23981394)
chr4 (156-184)||(33294959-33294987)
chr4 (148-184)||(35539622-35539658)
chr4 (143-183)||(39133105-39133145)
chr4 (153-200)||(46094248-46094296)
chr4 (156-184)||(51353444-51353472)
[»] scaffold0004 (1 HSPs)
scaffold0004 (143-184)||(212795-212836)
[»] scaffold0809 (2 HSPs)
scaffold0809 (157-201)||(3769-3813)
scaffold0809 (110-146)||(3770-3806)
[»] chr6 (20 HSPs)
chr6 (156-200)||(5953163-5953207)
chr6 (143-199)||(23582341-23582397)
chr6 (143-178)||(7054104-7054139)
chr6 (145-188)||(10343800-10343843)
chr6 (145-188)||(26644100-26644143)
chr6 (145-188)||(26750066-26750109)
chr6 (146-200)||(29942444-29942499)
chr6 (143-188)||(5832466-5832511)
chr6 (143-184)||(8237658-8237699)
chr6 (156-200)||(10344051-10344096)
chr6 (110-147)||(17441403-17441440)
chr6 (143-188)||(19376079-19376124)
chr6 (143-188)||(21226739-21226784)
chr6 (143-184)||(29964480-29964520)
chr6 (143-184)||(31826404-31826445)
chr6 (143-184)||(33561744-33561785)
chr6 (156-184)||(2270816-2270844)
chr6 (143-200)||(3593341-3593400)
chr6 (110-146)||(5953163-5953199)
chr6 (164-200)||(17441403-17441439)
[»] chr3 (18 HSPs)
chr3 (145-200)||(15309085-15309140)
chr3 (143-184)||(8355564-8355605)
chr3 (143-188)||(35359641-35359685)
chr3 (143-184)||(39846578-39846619)
chr3 (143-188)||(51102309-51102354)
chr3 (143-194)||(12767164-12767216)
chr3 (145-184)||(29013425-29013464)
chr3 (157-199)||(5416064-5416106)
chr3 (146-188)||(19308461-19308502)
chr3 (143-184)||(1351465-1351506)
chr3 (143-184)||(8487915-8487956)
chr3 (143-184)||(27760307-27760348)
chr3 (150-199)||(53806597-53806646)
chr3 (143-182)||(23526751-23526791)
chr3 (156-188)||(40641274-40641306)
chr3 (156-184)||(49872733-49872761)
chr3 (145-200)||(49872949-49873005)
chr3 (156-184)||(51252295-51252323)
[»] chr1 (22 HSPs)
chr1 (143-200)||(28724326-28724384)
chr1 (151-201)||(41055128-41055178)
chr1 (143-188)||(15710793-15710838)
chr1 (143-184)||(15879966-15880007)
chr1 (144-200)||(24987609-24987666)
chr1 (143-184)||(28411145-28411186)
chr1 (143-200)||(10027974-10028033)
chr1 (145-184)||(15336393-15336432)
chr1 (145-200)||(45832163-45832218)
chr1 (143-184)||(972859-972901)
chr1 (151-200)||(13545812-13545862)
chr1 (143-200)||(42736819-42736877)
chr1 (156-185)||(2472407-2472436)
chr1 (156-185)||(7611435-7611464)
chr1 (144-184)||(10490235-10490276)
chr1 (143-184)||(15790470-15790511)
chr1 (143-184)||(21853434-21853475)
chr1 (143-184)||(23889695-23889736)
chr1 (143-188)||(31883775-31883820)
chr1 (143-180)||(46561409-46561445)
chr1 (143-179)||(16699102-16699138)
chr1 (143-178)||(31532487-31532523)
[»] scaffold0450 (2 HSPs)
scaffold0450 (143-200)||(7860-7918)
scaffold0450 (143-200)||(8093-8151)
[»] scaffold0769 (1 HSPs)
scaffold0769 (143-184)||(3933-3974)
[»] scaffold0740 (1 HSPs)
scaffold0740 (144-200)||(3648-3705)
[»] scaffold0597 (1 HSPs)
scaffold0597 (143-184)||(6476-6517)
[»] scaffold0079 (1 HSPs)
scaffold0079 (143-184)||(6829-6870)
[»] scaffold0009 (1 HSPs)
scaffold0009 (143-184)||(150005-150046)
[»] scaffold0002 (1 HSPs)
scaffold0002 (143-188)||(342436-342481)
[»] scaffold0727 (2 HSPs)
scaffold0727 (146-201)||(836-892)
scaffold0727 (153-200)||(1150-1198)
[»] scaffold0555 (1 HSPs)
scaffold0555 (156-188)||(6700-6732)
[»] scaffold0142 (1 HSPs)
scaffold0142 (143-200)||(34570-34629)
[»] scaffold0032 (1 HSPs)
scaffold0032 (145-200)||(91051-91107)
[»] scaffold0031 (1 HSPs)
scaffold0031 (156-184)||(2070-2098)


Alignment Details
Target: chr2 (Bit Score: 77; Significance: 8e-36; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 38385847 - 38385927
Alignment:
Q  19 gcattccactgcatgcgtgttcatgtatttctattgtttgattttacaatttttgtgacattttgcttgcatgttacttgt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38385847 gcattccactgcatgcgtgttcatgtatttctattgtttgattttacaatttttgtgacattttgtttgcatgttacttgt 38385927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 22535681 - 22535739
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagg-ggtaaatacctaataacc 200  Q
    ||||||||| || ||||||||||||||||||||||||||| |||||| ||||| |||||    
T  22535681 attttacagggggaaaaccagaaatgacctatattacaggaggtaaagacctattaacc 22535739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 30180879 - 30180924
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggggtaaa 188  Q
    ||||||||| ||||||||| |||||||||||||||| |||||||||    
T  30180879 attttacaggggaaaaaccggaaatgacctatattagaggggtaaa 30180924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 35337133 - 35337174
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| |||||||||| |||||||||||||||||||||    
T  35337133 attttacaggggaaaaaccaaaaatgacctatattacagggg 35337174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 38385993 - 38385935
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattaca-ggggtaaatacctaataacct 201  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||||| ||||| ||||||    
T  38385993 attttacagag-aaaaaccggaaatgacctatattacagggggtaaagacctattaacct 38385935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 40321485 - 40321442
Alignment:
Q  145 tttacagaggaaaaaccagaaatgacctatattacaggggtaaa 188  Q
    |||||||||| |||| | ||||||||||||||||||||||||||    
T  40321485 tttacagagggaaaatcggaaatgacctatattacaggggtaaa 40321442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 12028257 - 12028199
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggg-gtaaatacctaataacc 200  Q
    ||||||||| ||||||| || |||||||||||||||||||| ||||| ||||| |||||    
T  12028257 attttacaggggaaaaatcaaaaatgacctatattacagggtgtaaagacctattaacc 12028199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 185
Target Start/End: Complemental strand, 24951963 - 24951921
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggggt 185  Q
    ||||||||| || ||||||| ||||||||||||||||||||||    
T  24951963 attttacagggggaaaaccaaaaatgacctatattacaggggt 24951921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 28149664 - 28149722
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    ||||||||| || |||||| |||||||||||||||||| |||||||| ||||| |||||    
T  28149664 attttacagggggaaaaccggaaatgacctatattacagggggtaaaaacctattaacc 28149722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 184
Target Start/End: Original strand, 30371605 - 30371635
Alignment:
Q  154 gaaaaaccagaaatgacctatattacagggg 184  Q
    |||||||||||||||||||||||||||||||    
T  30371605 gaaaaaccagaaatgacctatattacagggg 30371635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 34428863 - 34428921
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagg-ggtaaatacctaataacc 200  Q
    ||||||||||| ||||||| |||||||||||||||| ||| |||||| ||||| |||||    
T  34428863 attttacagagaaaaaaccggaaatgacctatattataggaggtaaagacctattaacc 34428921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 183
Target Start/End: Complemental strand, 38358324 - 38358286
Alignment:
Q  145 tttacagaggaaaaaccagaaatgacctatattacaggg 183  Q
    ||||||| |||||||||||||||||||| ||||||||||    
T  38358324 tttacaggggaaaaaccagaaatgacctttattacaggg 38358286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 250
Target Start/End: Original strand, 38386231 - 38386261
Alignment:
Q  220 tgattacttgtttatcattgttattgcagaa 250  Q
    |||||||||||||||||||||||||||||||    
T  38386231 tgattacttgtttatcattgttattgcagaa 38386261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 42794325 - 42794367
Alignment:
Q  143 attttacagagg-aaaaaccagaaatgacctatattacagggg 184  Q
    |||||||||||| ||||||||||||||||||| ||||||||||    
T  42794325 attttacagagggaaaaaccagaaatgacctaaattacagggg 42794367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 43015198 - 43015244
Alignment:
Q  143 attttacagagga-aaaaccagaaatgacctatattacaggggtaaa 188  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  43015198 attttacaggggacaaaaccaaaaatgacctatattacaggggtaaa 43015244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 85725 - 85688
Alignment:
Q  110 ggttaataggtctttacccctctaatatgggtcatttt 147  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  85725 ggttaataggtctttacccctgtaatataggtcatttt 85688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 8214558 - 8214598
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| |||||||||| |||||||||||||||||||||    
T  8214558 attttacag-ggaaaaaccaaaaatgacctatattacagggg 8214598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 177
Target Start/End: Original strand, 15482333 - 15482366
Alignment:
Q  144 ttttacagaggaaaaaccagaaatgacctatatt 177  Q
    ||||||||||||||||| ||||||||||||||||    
T  15482333 ttttacagaggaaaaacaagaaatgacctatatt 15482366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 185
Target Start/End: Original strand, 27199137 - 27199166
Alignment:
Q  156 aaaaccagaaatgacctatattacaggggt 185  Q
    ||||||||||||||||||||||||||||||    
T  27199137 aaaaccagaaatgacctatattacaggggt 27199166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 185
Target Start/End: Original strand, 27854564 - 27854593
Alignment:
Q  156 aaaaccagaaatgacctatattacaggggt 185  Q
    ||||||||||||||||||||||||||||||    
T  27854564 aaaaccagaaatgacctatattacaggggt 27854593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 29640822 - 29640781
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || ||||||| |||||||||||||||||||||    
T  29640822 attttacagggggaaaaccaaaaatgacctatattacagggg 29640781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 34635940 - 34635981
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || |||||| ||||||||||||||||||||||    
T  34635940 attttacagggggaaaaccggaaatgacctatattacagggg 34635981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 37200405 - 37200348
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggggtaaatacctaataacc 200  Q
    |||||||||  | ||||||  ||||||||||||||||||||||||| ||||| |||||    
T  37200405 attttacaggaggaaaaccgaaaatgacctatattacaggggtaaagacctattaacc 37200348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 37200348 - 37200385
Alignment:
Q  110 ggttaataggtctttacccctctaatatgggtcatttt 147  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  37200348 ggttaataggtctttacccctgtaatataggtcatttt 37200385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 40385302 - 40385261
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||||| |||||| | |||||||||||||||||||||    
T  40385302 attttacagagaaaaaacaaaaaatgacctatattacagggg 40385261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 44610986 - 44610945
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| |||||||||| |||| ||||||||||||||||    
T  44610986 attttacaggggaaaaaccaaaaataacctatattacagggg 44610945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 85689 - 85725
Alignment:
Q  164 aaatgacctatattacaggggtaaatacctaataacc 200  Q
    ||||||||||||||||||||||||| ||||| |||||    
T  85689 aaatgacctatattacaggggtaaagacctattaacc 85725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 8467266 - 8467226
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggg 183  Q
    ||||||||| |||||||| | ||||||||||||||||||||    
T  8467266 attttacaggggaaaaacaaaaaatgacctatattacaggg 8467226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 18048862 - 18048830
Alignment:
Q  156 aaaaccagaaatgacctatattacaggggtaaa 188  Q
    ||||||| |||||||||||||||||||||||||    
T  18048862 aaaaccaaaaatgacctatattacaggggtaaa 18048830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 18701611 - 18701551
Alignment:
Q  143 attttacagagga-aaaaccagaaatgacctatattacagggg-taaatacctaataacct 201  Q
    |||||||||| || ||||||| ||||||||||||||||||||| |||| ||||| ||||||    
T  18701611 attttacagaagagaaaaccaaaaatgacctatattacaggggataaagacctattaacct 18701551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 25926944 - 25926888
Alignment:
Q  146 ttacagaggaaaaaccagaaatgacctatattacag-gggtaaatacctaataacct 201  Q
    ||||||| ||||||| |||||||||||||||||||| || |||| ||||| ||||||    
T  25926944 ttacagaagaaaaactagaaatgacctatattacagaggataaagacctattaacct 25926888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 25927129 - 25927177
Alignment:
Q  153 ggaaaaaccagaaatgacctatattac-aggggtaaatacctaataacc 200  Q
    ||||||||||||||||||||||||||| |||| |||| ||||| |||||    
T  25927129 ggaaaaaccagaaatgacctatattacaagggataaagacctattaacc 25927177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 28110299 - 28110271
Alignment:
Q  156 aaaaccagaaatgacctatattacagggg 184  Q
    |||||||||||||||||||||||||||||    
T  28110299 aaaaccagaaatgacctatattacagggg 28110271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 29098078 - 29098026
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattac-aggggtaaataccta 194  Q
    ||||||||| || ||||||||||||||| |||||||| ||||||||| |||||    
T  29098078 attttacagggggaaaaccagaaatgacttatattacaaggggtaaagaccta 29098026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 30180793 - 30180765
Alignment:
Q  156 aaaaccagaaatgacctatattacagggg 184  Q
    |||||||||||||||||||||||||||||    
T  30180793 aaaaccagaaatgacctatattacagggg 30180765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 32449918 - 32449954
Alignment:
Q  145 tttacagaggaaaaaccagaaatgacctatattacag 181  Q
    |||||||  ||||||||||||||||||||||||||||    
T  32449918 tttacaggagaaaaaccagaaatgacctatattacag 32449954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 37147796 - 37147843
Alignment:
Q  156 aaaaccagaaatgacctatattaca--ggggtaaatacctaataacct 201  Q
    |||||||||||||||||||||||||  |||||||| ||||| ||||||    
T  37147796 aaaaccagaaatgacctatattacagtggggtaaagacctattaacct 37147843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 40652621 - 40652709
Alignment:
Q  111 gttaataggtctttacccc-tctaatatgggtcattttacagaggaaaaaccagaaatgacctatattacaggggtaaatacctaataacc 200  Q
    ||||||||||||||||||| | |||||| ||||||||  | | || ||||||||||||||||||||||||||||||||| ||||| |||||    
T  40652621 gttaataggtctttaccccctgtaatataggtcattt--ccgggggaaaaccagaaatgacctatattacaggggtaaagacctattaacc 40652709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 200
Target Start/End: Original strand, 43945397 - 43945440
Alignment:
Q  157 aaaccagaaatgacctatattacaggggtaaatacctaataacc 200  Q
    |||||||||||||||||||||||||||||||| ||||| |||||    
T  43945397 aaaccagaaatgacctatattacaggggtaaagacctattaacc 43945440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 4105277 - 4105335
Alignment:
Q  143 attttacagagga-aaaaccagaaatgacctatattacaggggtaaatacctaataacc 200  Q
    ||||||||||||| ||||| | ||||||||||||||||||||||||| ||||| |||||    
T  4105277 attttacagaggagaaaacaaaaaatgacctatattacaggggtaaagacctattaacc 4105335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 38132059 - 38132100
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  38132059 attttacagaggaaaaacaaaaaatgacctatattacagggg 38132100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 40770576 - 40770532
Alignment:
Q  156 aaaaccagaaatgacctatattacaggggtaaatacctaataacc 200  Q
    ||||||| ||||||||||||||||| ||||||||||||| |||||    
T  40770576 aaaaccaaaaatgacctatattacaagggtaaatacctattaacc 40770532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 38500511 - 38500570
Alignment:
Q  143 attttacagag-gaaaaaccagaaatgacctatattacaggggtaaatacctaataacct 201  Q
    ||||||||||| | ||||||  ||||||||||||||||||||||||| ||||| ||||||    
T  38500511 attttacagagaggaaaaccgaaaatgacctatattacaggggtaaagacctattaacct 38500570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 34985320 - 34985378
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    ||||||||| |  ||||||||||||||||||||||||| |||||||| ||||| |||||    
T  34985320 attttacagggcgaaaaccagaaatgacctatattacagggggtaaagacctattaacc 34985378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 3912316 - 3912275
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || |||||| ||||||||||||||||||||||    
T  3912316 attttacagggggaaaaccggaaatgacctatattacagggg 3912275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 4105335 - 4105298
Alignment:
Q  110 ggttaataggtctttacccctctaatatgggtcatttt 147  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  4105335 ggttaataggtctttacccctgtaatataggtcatttt 4105298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 5643022 - 5643063
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || |||||||||||||||||| ||||||||||    
T  5643022 attttacagggggaaaaccagaaatgacctaaattacagggg 5643063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 5644963 - 5645004
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || |||||||||||||||||| ||||||||||    
T  5644963 attttacagggggaaaaccagaaatgacctaaattacagggg 5645004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 11105830 - 11105789
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || ||||||| |||||||||||||||||||||    
T  11105830 attttacagggggaaaaccaaaaatgacctatattacagggg 11105789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 11105947 - 11105988
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| |||||||| | |||||||||||||||||||||    
T  11105947 attttacaggggaaaaacaaaaaatgacctatattacagggg 11105988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 21692458 - 21692417
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || ||||||| |||||||||||||||||||||    
T  21692458 attttacagggggaaaaccaaaaatgacctatattacagggg 21692417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 24971175 - 24971216
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||    
T  24971175 attttacaggggaaaaaccggaaatgatctatattacagggg 24971216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 38500569 - 38500532
Alignment:
Q  110 ggttaataggtctttacccctctaatatgggtcatttt 147  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  38500569 ggttaataggtctttacccctgtaatataggtcatttt 38500532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 27987534 - 27987582
Alignment:
Q  153 ggaaaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    ||||||||||||||||| |||||||||| |||||||| ||||| |||||    
T  27987534 ggaaaaaccagaaatgatctatattacagggggtaaagacctattaacc 27987582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 28044836 - 28044884
Alignment:
Q  153 ggaaaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    ||||||||||||||||| |||||||||| |||||||| ||||| |||||    
T  28044836 ggaaaaaccagaaatgatctatattacagggggtaaagacctattaacc 28044884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 33331812 - 33331844
Alignment:
Q  156 aaaaccagaaatgacctatattacaggggtaaa 188  Q
    ||||||||||||||||||||||||| |||||||    
T  33331812 aaaaccagaaatgacctatattacatgggtaaa 33331844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 40652709 - 40652673
Alignment:
Q  110 ggttaataggtctttacccctctaatatgggtcattt 146  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  40652709 ggttaataggtctttacccctgtaatataggtcattt 40652673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 43400728 - 43400672
Alignment:
Q  145 tttacagaggaaaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    ||||||| | |||||||||||||||| ||||||||| |||||||| ||||| |||||    
T  43400728 tttacagggaaaaaaccagaaatgacatatattacagggggtaaagacctattaacc 43400672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 43945440 - 43945404
Alignment:
Q  110 ggttaataggtctttacccctctaatatgggtcattt 146  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  43945440 ggttaataggtctttacccctgtaatataggtcattt 43945404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 44414076 - 44414134
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggggtaaatacctaataacct 201  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||| ||||| ||||||    
T  44414076 attttacaaaggaaaaaccataaatgacctatattacaggggtaaagacctattaacct 44414134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 16902335 - 16902392
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggggtaaatacctaataacc 200  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||| ||||| |||||    
T  16902335 attttacaggggaaaaaccaaaaatgacctatattacaggggtaaagacctattaacc 16902392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 21443925 - 21443884
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  21443925 attttacagaggaaaaaccagaaatgacttatattacagggg 21443884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 24555901 - 24555957
Alignment:
Q  145 tttacagaggaaaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    ||||||| |||||||||||||||||||||||||||| |||||||| ||||| |||||    
T  24555901 tttacaggggaaaaaccagaaatgacctatattacagggggtaaaaacctattaacc 24555957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 24478083 - 24478042
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  24478083 attttacaggggaaaaaccggaaatgacctatattacagggg 24478042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 39065442 - 39065401
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  39065442 attttacaggggaaaaaccggaaatgacctatattacagggg 39065401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 5909762 - 5909714
Alignment:
Q  153 ggaaaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    |||||||||||||||||||||||||||| |||||||| ||||| |||||    
T  5909762 ggaaaaaccagaaatgacctatattacatggggtaaagacctattaacc 5909714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 19979711 - 19979652
Alignment:
Q  143 attttaca-gaggaaaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    |||||||| |||||||||||||||||||| ||||||||| |||||||| ||||| |||||    
T  19979711 attttacacgaggaaaaaccagaaatgacttatattacagggggtaaagacctattaacc 19979652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 38193191 - 38193250
Alignment:
Q  143 attttacagagga-aaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    ||||||||| ||| ||||||||||||||||||||||||| |||||||| ||||| |||||    
T  38193191 attttacaggggagaaaaccagaaatgacctatattacagggggtaaagacctattaacc 38193250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 48104568 - 48104509
Alignment:
Q  143 attttacagagga-aaaaccagaaatgacctatattacaggggtaaatacctaataacct 201  Q
    ||||||||| ||| ||||| | ||||||||||||||||||||||||| ||||| ||||||    
T  48104568 attttacaggggagaaaacaaaaaatgacctatattacaggggtaaagacctattaacct 48104509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 1693449 - 1693507
Alignment:
Q  143 attttacagaggaaaaaccagaaa-tgacctatattacaggggtaaatacctaataacc 200  Q
    |||||||||||| ||||||||||| |||||||||||| | ||||||| ||||| |||||    
T  1693449 attttacagagggaaaaccagaaaatgacctatattataagggtaaagacctattaacc 1693507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 15994755 - 15994797
Alignment:
Q  143 attttacagag-gaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||||| |||||||| ||||||||||||||||||||||    
T  15994755 attttacagagtgaaaaaccggaaatgacctatattacagggg 15994797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 48104726 - 48104784
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagg-ggtaaatacctaataacc 200  Q
    |||||||||||| ||||||  ||||||||||||||||||| |||||| ||||| |||||    
T  48104726 attttacagagggaaaaccgaaaatgacctatattacaggaggtaaagacctattaacc 48104784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 8603741 - 8603782
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| |||||||| | |||||||||||||||||||||    
T  8603741 attttacaggggaaaaacaaaaaatgacctatattacagggg 8603782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 16902392 - 16902355
Alignment:
Q  110 ggttaataggtctttacccctctaatatgggtcatttt 147  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  16902392 ggttaataggtctttacccctgtaatataggtcatttt 16902355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 22335516 - 22335557
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || ||||||| |||||||||||||||||||||    
T  22335516 attttacagggggaaaaccaaaaatgacctatattacagggg 22335557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 23371507 - 23371450
Alignment:
Q  144 ttttacagaggaaaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    |||||||| || ||||||| ||||||||||||||||| |||||||| ||||| |||||    
T  23371507 ttttacagggggaaaaccataaatgacctatattacagggggtaaagacctattaacc 23371450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 23784642 - 23784585
Alignment:
Q  144 ttttacagaggaaaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    |||||||| || |||||||| |||||||||||||||| |||||||| ||||| |||||    
T  23784642 ttttacagggggaaaaccagtaatgacctatattacagggggtaaagacctattaacc 23784585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 25622193 - 25622149
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggggtaaa 188  Q
    ||||||||| |||||| ||| |||||||||||||||||||||||||    
T  25622193 attttacaggggaaaa-ccaaaaatgacctatattacaggggtaaa 25622149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 32199885 - 32199840
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggggtaaa 188  Q
    ||||| ||| ||||||||| ||||||||| ||||||||||||||||    
T  32199885 attttgcaggggaaaaaccggaaatgaccaatattacaggggtaaa 32199840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 35097648 - 35097607
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || ||||||| |||||||||||||||||||||    
T  35097648 attttacagggggaaaaccaaaaatgacctatattacagggg 35097607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 38192874 - 38192915
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| ||||||||| |||||||| |||||||||||||    
T  38192874 attttacaggggaaaaaccggaaatgacatatattacagggg 38192915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 48104510 - 48104547
Alignment:
Q  110 ggttaataggtctttacccctctaatatgggtcatttt 147  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  48104510 ggttaataggtctttacccctgtaatataggtcatttt 48104547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 10688503 - 10688459
Alignment:
Q  157 aaaccagaaatgacctatattacag-gggtaaatacctaataacc 200  Q
    ||||||||||||||||||||||||| ||||||| ||||| |||||    
T  10688503 aaaccagaaatgacctatattacagagggtaaagacctattaacc 10688459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 184
Target Start/End: Original strand, 12814816 - 12814844
Alignment:
Q  156 aaaaccagaaatgacctatattacagggg 184  Q
    |||||||||||||||||||||||||||||    
T  12814816 aaaaccagaaatgacctatattacagggg 12814844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 30335381 - 30335421
Alignment:
Q  144 ttttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    |||||||| || ||||||| |||||||||||||||||||||    
T  30335381 ttttacagggggaaaaccaaaaatgacctatattacagggg 30335421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 44414133 - 44414097
Alignment:
Q  110 ggttaataggtctttacccctctaatatgggtcattt 146  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  44414133 ggttaataggtctttacccctgtaatataggtcattt 44414097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 185
Target Start/End: Complemental strand, 12330913 - 12330871
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggggt 185  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  12330913 attttacagaggaaaaaccaaaaatgacctatattacaggggt 12330871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 21148850 - 21148808
Alignment:
Q  152 aggaaaaaccagaaatgacctatattacaggggtaaataccta 194  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  21148850 aggaaaaaccagaaatgacctatattacaggggtaaaaaccta 21148808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 182
Target Start/End: Original strand, 13924344 - 13924383
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagg 182  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  13924344 attttacagaggaaaaaccggaaatgacctatattacagg 13924383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 13012624 - 13012668
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggggtaaa 188  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||    
T  13012624 attttacaggggaaaaacca-aaatgacctatattacaggggtaaa 13012668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 21149112 - 21149156
Alignment:
Q  156 aaaaccagaaatgacctatattacaggggtaaatacctaataacc 200  Q
    ||||||| ||||||||||||||||||||||||| ||||| |||||    
T  21149112 aaaaccaaaaatgacctatattacaggggtaaagacctattaacc 21149156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 33659103 - 33659162
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattaca--ggggtaaatacctaataacc 200  Q
    ||||||||| || |||||| ||||||||||||||||||  |||||||||||||| |||||    
T  33659103 attttacagggggaaaaccggaaatgacctatattacaagggggtaaatacctattaacc 33659162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 182
Target Start/End: Original strand, 20698522 - 20698557
Alignment:
Q  147 tacagaggaaaaaccagaaatgacctatattacagg 182  Q
    ||||| ||||||||||||||||||||||||||||||    
T  20698522 tacaggggaaaaaccagaaatgacctatattacagg 20698557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 10976745 - 10976803
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    ||||||||| || |||||| |||||||||||||||||| |||||||| ||||| |||||    
T  10976745 attttacagggggaaaaccggaaatgacctatattacagggggtaaagacctattaacc 10976803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 185
Target Start/End: Original strand, 28593522 - 28593564
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggggt 185  Q
    ||||||||| |||||||| | ||||||||||||||||||||||    
T  28593522 attttacaggggaaaaacaaaaaatgacctatattacaggggt 28593564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 711297 - 711256
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || ||||||| |||||||||||||||||||||    
T  711297 attttacagggggaaaaccataaatgacctatattacagggg 711256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 4414214 - 4414255
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || |||||||||||||||||||| ||||||||    
T  4414214 attttacagggggaaaaccagaaatgacctataatacagggg 4414255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 185
Target Start/End: Original strand, 9227095 - 9227124
Alignment:
Q  156 aaaaccagaaatgacctatattacaggggt 185  Q
    ||||||||||||||||||||||||||||||    
T  9227095 aaaaccagaaatgacctatattacaggggt 9227124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 16920654 - 16920695
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || |||||||||||||| ||||||||||||||    
T  16920654 attttacagggggaaaaccagaaatgatctatattacagggg 16920695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 21149156 - 21149119
Alignment:
Q  110 ggttaataggtctttacccctctaatatgggtcatttt 147  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  21149156 ggttaataggtctttacccctgtaatataggtcatttt 21149119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 26035095 - 26035132
Alignment:
Q  156 aaaaccagaaatgacctatattacaggggtaaatacct 193  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  26035095 aaaaccggaaatgacctatattacaggggtaaagacct 26035132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 31312546 - 31312505
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    |||||| || |||||||||| |||||||||||||||||||||    
T  31312546 attttataggggaaaaaccaaaaatgacctatattacagggg 31312505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 31601808 - 31601767
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||||| |||||||| ||||||| |||||||||||||    
T  31601808 attttacagagaaaaaaccaaaaatgacatatattacagggg 31601767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 42119285 - 42119326
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || |||||||||||| ||||||||||||||||    
T  42119285 attttacagggggaaaaccagaaattacctatattacagggg 42119326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 18805401 - 18805433
Alignment:
Q  156 aaaaccagaaatgacctatattacaggggtaaa 188  Q
    ||||||||||||||| |||||||||||||||||    
T  18805401 aaaaccagaaatgacatatattacaggggtaaa 18805433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 31861540 - 31861492
Alignment:
Q  153 ggaaaaaccagaaatgacctatattacagggg-taaatacctaataacc 200  Q
    ||||||||| |||||||||||||||||||||| |||| ||||| |||||    
T  31861540 ggaaaaaccggaaatgacctatattacaggggataaagacctattaacc 31861492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 31920343 - 31920383
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggg 183  Q
    ||||||||| || |||||| |||||||||||||||||||||    
T  31920343 attttacagggggaaaaccggaaatgacctatattacaggg 31920383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 36992991 - 36993039
Alignment:
Q  153 ggaaaaaccagaaatgacctatattacag-gggtaaatacctaataacc 200  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||| |||||    
T  36992991 ggaaaaaccggaaatgacctatattacagagggtaaagacctattaacc 36993039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 54130418 - 54130364
Alignment:
Q  145 tttacagaggaaaaaccagaaatgacctatattacaggggtaaatacctaataac 199  Q
    ||||||| ||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  54130418 tttacaggggaaaaaccagaaatgatctatattacaggggtaaagacctattaac 54130364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 188
Target Start/End: Original strand, 16482292 - 16482327
Alignment:
Q  153 ggaaaaaccagaaatgacctatattacaggggtaaa 188  Q
    ||||||||||||||||||||||||||||||||||||    
T  16482292 ggaaaaaccagaaatgacctatattacaggggtaaa 16482327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 51396218 - 51396160
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg-taaatacctaataacc 200  Q
    |||||||||||| ||||||||||||||| ||||||||||||| |||| ||||| |||||    
T  51396218 attttacagagggaaaaccagaaatgacttatattacaggggataaagacctattaacc 51396160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 51965431 - 51965373
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggg-gtaaatacctaataacc 200  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||||| ||||| |||||    
T  51965431 attttacagagggaaaaccggaaatgacctatattacagggagtaaagacctattaacc 51965373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 53231833 - 53231787
Alignment:
Q  143 attttacagaggaaaaa-ccagaaatgacctatattacaggggtaaa 188  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  53231833 attttacagaggaaaaaaccaaaaatgacctatattacaggggtaaa 53231787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 35370386 - 35370427
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  35370386 attttacagagggaaaaccaaaaatgacctatattacagggg 35370427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 36405851 - 36405892
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| |||||||||| |||||||||||||||||||||    
T  36405851 attttacaggggaaaaaccaaaaatgacctatattacagggg 36405892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 11563514 - 11563573
Alignment:
Q  143 attttacagaggaaaa-accagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    ||||||||| |||||| |||||||||||||||||||||| |||||||| ||||| |||||    
T  11563514 attttacaggggaaaaaaccagaaatgacctatattacagggggtaaagacctattaacc 11563573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 188
Target Start/End: Original strand, 17696394 - 17696425
Alignment:
Q  157 aaaccagaaatgacctatattacaggggtaaa 188  Q
    ||||||||||||||||||||||||||||||||    
T  17696394 aaaccagaaatgacctatattacaggggtaaa 17696425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 182
Target Start/End: Original strand, 31592743 - 31592782
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagg 182  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  31592743 attttacagaggaaaaacaaaaaatgacctatattacagg 31592782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 12144777 - 12144823
Alignment:
Q  143 attttacag-aggaaaaaccagaaatgacctatattacaggggtaaa 188  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||||    
T  12144777 attttacaggaggaaaaacaaaaaatgacctatattacaggggtaaa 12144823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 183
Target Start/End: Original strand, 21780363 - 21780393
Alignment:
Q  153 ggaaaaaccagaaatgacctatattacaggg 183  Q
    |||||||||||||||||||||||||||||||    
T  21780363 ggaaaaaccagaaatgacctatattacaggg 21780393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 35539790 - 35539836
Alignment:
Q  155 aaaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    ||||||| |||||||||||||||||| |||||||||||||| |||||    
T  35539790 aaaaaccggaaatgacctatattacagggggtaaatacctattaacc 35539836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 50727637 - 50727591
Alignment:
Q  155 aaaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    |||||||||||||||||||||||||| |||||||| ||||| |||||    
T  50727637 aaaaaccagaaatgacctatattacagggggtaaaaacctattaacc 50727591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 50735651 - 50735605
Alignment:
Q  155 aaaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    |||||||||||||||||||||||||| |||||||| ||||| |||||    
T  50735651 aaaaaccagaaatgacctatattacagggggtaaaaacctattaacc 50735605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 1386092 - 1386035
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggggtaaatacctaataacc 200  Q
    ||||||||| ||  |||| |||||||||||||||||||||| |||| ||||| |||||    
T  1386092 attttacaggggggaaactagaaatgacctatattacagggataaagacctattaacc 1386035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 18320693 - 18320734
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || |||||| ||||||||||||||||||||||    
T  18320693 attttacagggggaaaaccggaaatgacctatattacagggg 18320734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 22854280 - 22854321
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || |||||||||||||||||| ||||||||||    
T  22854280 attttacagggggaaaaccagaaatgacctaaattacagggg 22854321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 24215752 - 24215797
Alignment:
Q  156 aaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    ||||||||||||||||||||||||| |||||||| ||||| |||||    
T  24215752 aaaaccagaaatgacctatattacagggggtaaagacctattaacc 24215797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 27579573 - 27579532
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    |||||||||||  |||||| ||||||||||||||||||||||    
T  27579573 attttacagagagaaaaccggaaatgacctatattacagggg 27579532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 56467474 - 56467429
Alignment:
Q  144 ttttacagagga-aaaaccagaaatgacctatattacaggggtaaa 188  Q
    |||||||| ||| |||||||||||| ||||||||||||||||||||    
T  56467474 ttttacaggggataaaaccagaaatcacctatattacaggggtaaa 56467429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 5401995 - 5402054
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattaca--ggggtaaatacctaataacc 200  Q
    ||||||||| || |||||| ||||||||||||||||||  |||||||| ||||| |||||    
T  5401995 attttacagggggaaaaccggaaatgacctatattacaagggggtaaagacctattaacc 5402054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 12388131 - 12388099
Alignment:
Q  156 aaaaccagaaatgacctatattacaggggtaaa 188  Q
    |||||| ||||||||||||||||||||||||||    
T  12388131 aaaaccggaaatgacctatattacaggggtaaa 12388099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 13334869 - 13334841
Alignment:
Q  156 aaaaccagaaatgacctatattacagggg 184  Q
    |||||||||||||||||||||||||||||    
T  13334869 aaaaccagaaatgacctatattacagggg 13334841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 184
Target Start/End: Original strand, 15157078 - 15157106
Alignment:
Q  156 aaaaccagaaatgacctatattacagggg 184  Q
    |||||||||||||||||||||||||||||    
T  15157078 aaaaccagaaatgacctatattacagggg 15157106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 21798379 - 21798351
Alignment:
Q  156 aaaaccagaaatgacctatattacagggg 184  Q
    |||||||||||||||||||||||||||||    
T  21798379 aaaaccagaaatgacctatattacagggg 21798351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 23981362 - 23981394
Alignment:
Q  156 aaaaccagaaatgacctatattacaggggtaaa 188  Q
    ||||||| |||||||||||||||||||||||||    
T  23981362 aaaaccaaaaatgacctatattacaggggtaaa 23981394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 33294987 - 33294959
Alignment:
Q  156 aaaaccagaaatgacctatattacagggg 184  Q
    |||||||||||||||||||||||||||||    
T  33294987 aaaaccagaaatgacctatattacagggg 33294959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 35539658 - 35539622
Alignment:
Q  148 acagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  35539658 acagagggaaaaccaaaaatgacctatattacagggg 35539622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 39133145 - 39133105
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggg 183  Q
    ||||||| |||| |||||| |||||||||||||||||||||    
T  39133145 attttacggaggtaaaaccggaaatgacctatattacaggg 39133105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 46094248 - 46094296
Alignment:
Q  153 ggaaaaaccagaaatgacctatattacag-gggtaaatacctaataacc 200  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||| |||||    
T  46094248 ggaaaaaccggaaatgacctatattacagagggtaaagacctattaacc 46094296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 184
Target Start/End: Original strand, 51353444 - 51353472
Alignment:
Q  156 aaaaccagaaatgacctatattacagggg 184  Q
    |||||||||||||||||||||||||||||    
T  51353444 aaaaccagaaatgacctatattacagggg 51353472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 212795 - 212836
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  212795 attttacaggggaaaaaccagaaatgacctatattacagggg 212836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 3813 - 3769
Alignment:
Q  157 aaaccagaaatgacctatattacaggggtaaatacctaataacct 201  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||    
T  3813 aaaccagaaatgacctatattacaggggtaaagacctattaacct 3769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 146
Target Start/End: Original strand, 3770 - 3806
Alignment:
Q  110 ggttaataggtctttacccctctaatatgggtcattt 146  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  3770 ggttaataggtctttacccctgtaatataggtcattt 3806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 5953207 - 5953163
Alignment:
Q  156 aaaaccagaaatgacctatattacaggggtaaatacctaataacc 200  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||    
T  5953207 aaaaccagaaatgacctatattacaggggtaaagacctattaacc 5953163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 23582397 - 23582341
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggggtaaatacctaataac 199  Q
    ||||||||||||||||| || |||| |||||||||||| ||||||| ||||| ||||    
T  23582397 attttacagaggaaaaatcataaataacctatattacaagggtaaagacctattaac 23582341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 7054139 - 7054104
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatatta 178  Q
    ||||||||||||||||||| ||||||||||||||||    
T  7054139 attttacagaggaaaaacctgaaatgacctatatta 7054104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 10343800 - 10343843
Alignment:
Q  145 tttacagaggaaaaaccagaaatgacctatattacaggggtaaa 188  Q
    ||||||| ||||||||| |||||||| |||||||||||||||||    
T  10343800 tttacaggggaaaaaccggaaatgacatatattacaggggtaaa 10343843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 26644143 - 26644100
Alignment:
Q  145 tttacagaggaaaaaccagaaatgacctatattacaggggtaaa 188  Q
    |||||||||| ||||||| || ||||||||||||||||||||||    
T  26644143 tttacagagggaaaaccaaaagtgacctatattacaggggtaaa 26644100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 26750109 - 26750066
Alignment:
Q  145 tttacagaggaaaaaccagaaatgacctatattacaggggtaaa 188  Q
    |||||||||| ||||||| || ||||||||||||||||||||||    
T  26750109 tttacagagggaaaaccaaaagtgacctatattacaggggtaaa 26750066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 29942444 - 29942499
Alignment:
Q  146 ttacagaggaaaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    |||||| || ||||||||||||||||||||||||| |||||||| ||||| |||||    
T  29942444 ttacagggggaaaaccagaaatgacctatattacagggggtaaagacctattaacc 29942499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 5832466 - 5832511
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggggtaaa 188  Q
    ||||||||||| ||||||| ||||| ||||||||||| ||||||||    
T  5832466 attttacagagaaaaaaccggaaataacctatattacgggggtaaa 5832511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 8237699 - 8237658
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| |||||||||  |||||||||||||||||||||    
T  8237699 attttacaggggaaaaaccgaaaatgacctatattacagggg 8237658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 10344096 - 10344051
Alignment:
Q  156 aaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    ||||||||||||||||||||||||| |||||||| ||||| |||||    
T  10344096 aaaaccagaaatgacctatattacagggggtaaagacctattaacc 10344051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 17441403 - 17441440
Alignment:
Q  110 ggttaataggtctttacccctctaatatgggtcatttt 147  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  17441403 ggttaataggtctttacccctgtaatataggtcatttt 17441440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 19376124 - 19376079
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggggtaaa 188  Q
    |||||| || || ||||||| |||||||||||||||||||||||||    
T  19376124 attttatagggggaaaaccaaaaatgacctatattacaggggtaaa 19376079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 21226784 - 21226739
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggggtaaa 188  Q
    ||||||||| || ||||||  |||||||||||||||||||||||||    
T  21226784 attttacagggggaaaacccaaaatgacctatattacaggggtaaa 21226739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 29964520 - 29964480
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  29964520 attttacag-ggaaaaatcagaaatgacctatattacagggg 29964480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 31826404 - 31826445
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| |||||||| | |||||||||||||||||||||    
T  31826404 attttacaggggaaaaacaaaaaatgacctatattacagggg 31826445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 33561785 - 33561744
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || |||||||||||| ||||||||||||||||    
T  33561785 attttacagggggaaaaccagaaataacctatattacagggg 33561744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 184
Target Start/End: Original strand, 2270816 - 2270844
Alignment:
Q  156 aaaaccagaaatgacctatattacagggg 184  Q
    |||||||||||||||||||||||||||||    
T  2270816 aaaaccagaaatgacctatattacagggg 2270844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 3593400 - 3593341
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg--taaatacctaataacc 200  Q
    |||||||| ||| ||||||||||||||||||||||| || ||  |||||||||| |||||    
T  3593400 attttacaaagggaaaaccagaaatgacctatattatagaggaataaatacctattaacc 3593341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 146
Target Start/End: Original strand, 5953163 - 5953199
Alignment:
Q  110 ggttaataggtctttacccctctaatatgggtcattt 146  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  5953163 ggttaataggtctttacccctgtaatataggtcattt 5953199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 17441439 - 17441403
Alignment:
Q  164 aaatgacctatattacaggggtaaatacctaataacc 200  Q
    ||||||||||||||||||||||||| ||||| |||||    
T  17441439 aaatgacctatattacaggggtaaagacctattaacc 17441403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 15309140 - 15309085
Alignment:
Q  145 tttacagaggaaaaaccagaaatgacctatattacaggggtaaatacctaataacc 200  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||| ||||| |||||    
T  15309140 tttacaggggaaaaaccggaaataacctatattacaggggtaaaaacctattaacc 15309085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 8355564 - 8355605
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  8355564 attttacagggggaaaaccagaaatgacctatattacagggg 8355605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 35359641 - 35359685
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggggtaaa 188  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||    
T  35359641 attttacag-ggaaaaaccaaaaatgacctatattacaggggtaaa 35359685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 39846578 - 39846619
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| |||||||||| |||||||||||||||||||||    
T  39846578 attttacaggggaaaaaccaaaaatgacctatattacagggg 39846619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 51102309 - 51102354
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggggtaaa 188  Q
    ||||||||||||  |||||| |||||||||||||||||||||||||    
T  51102309 attttacagaggggaaaccaaaaatgacctatattacaggggtaaa 51102354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 12767164 - 12767216
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattac-aggggtaaataccta 194  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||||||| |||||    
T  12767164 attttacaggggaaaaatcagaaatgacctatattacaaggggtaaagaccta 12767216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 29013464 - 29013425
Alignment:
Q  145 tttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||| | ||||||||||||||||||||||||||||||    
T  29013464 tttacagggaaaaaaccagaaatgacctatattacagggg 29013425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 5416106 - 5416064
Alignment:
Q  157 aaaccagaaatgacctatattacaggggtaaatacctaataac 199  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||    
T  5416106 aaaccagaaataacctatattacaggggtaaagacctattaac 5416064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 19308461 - 19308502
Alignment:
Q  146 ttacagaggaaaaaccagaaatgacctatattacaggggtaaa 188  Q
    ||||||||| |||||||||||||||||||||||| ||||||||    
T  19308461 ttacagaggtaaaaccagaaatgacctatattac-ggggtaaa 19308502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 1351465 - 1351506
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||  |||||||||| |||||||||||||||||||||    
T  1351465 attttacaagggaaaaaccaaaaatgacctatattacagggg 1351506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 8487915 - 8487956
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| |||||||| | |||||||||||||||||||||    
T  8487915 attttacaggggaaaaacaaaaaatgacctatattacagggg 8487956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 27760348 - 27760307
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||  || |||||||||||||||||||||||||||||    
T  27760348 attttacaaggggaaaaccagaaatgacctatattacagggg 27760307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 53806646 - 53806597
Alignment:
Q  150 agaggaaaaaccagaaatgacctatattacaggggtaaatacctaataac 199  Q
    |||||||||||| |||||||||||||||||||| | ||| ||||| ||||    
T  53806646 agaggaaaaaccggaaatgacctatattacaggagaaaagacctattaac 53806597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 182
Target Start/End: Complemental strand, 23526791 - 23526751
Alignment:
Q  143 attttacagaggaaaaa-ccagaaatgacctatattacagg 182  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  23526791 attttacagaggaaaaaaccaaaaatgacctatattacagg 23526751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 40641306 - 40641274
Alignment:
Q  156 aaaaccagaaatgacctatattacaggggtaaa 188  Q
    ||||||| |||||||||||||||||||||||||    
T  40641306 aaaaccataaatgacctatattacaggggtaaa 40641274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 49872761 - 49872733
Alignment:
Q  156 aaaaccagaaatgacctatattacagggg 184  Q
    |||||||||||||||||||||||||||||    
T  49872761 aaaaccagaaatgacctatattacagggg 49872733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 49872949 - 49873005
Alignment:
Q  145 tttacagaggaaaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    ||||||| || |||||| |||||||||||||||||| |||||||| ||||| |||||    
T  49872949 tttacagggggaaaaccggaaatgacctatattacagggggtaaagacctattaacc 49873005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 184
Target Start/End: Original strand, 51252295 - 51252323
Alignment:
Q  156 aaaaccagaaatgacctatattacagggg 184  Q
    |||||||||||||||||||||||||||||    
T  51252295 aaaaccagaaatgacctatattacagggg 51252323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.00000000009; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 28724384 - 28724326
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    |||||||||||| ||||||||||||||||||| ||||| |||||||| ||||| |||||    
T  28724384 attttacagagggaaaaccagaaatgacctattttacagggggtaaagacctattaacc 28724326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 41055128 - 41055178
Alignment:
Q  151 gaggaaaaaccagaaatgacctatattacaggggtaaatacctaataacct 201  Q
    |||| ||||||||||||||||||||||||||||||||| || || ||||||    
T  41055128 gagggaaaaccagaaatgacctatattacaggggtaaagacgtattaacct 41055178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 15710793 - 15710838
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggggtaaa 188  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||    
T  15710793 attttacagaggaaaaacaaaaaatgacctatattacaagggtaaa 15710838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 15879966 - 15880007
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  15879966 attttacagagggaaaaccaaaaatgacctatattacagggg 15880007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 24987666 - 24987609
Alignment:
Q  144 ttttacagaggaaaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||| ||||| |||||    
T  24987666 ttttacaggggaaaaaccggaaatgacctatattacagggggtaaagacctattaacc 24987609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 28411145 - 28411186
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| |||||||||||||||||||||||||| |||||    
T  28411145 attttacaggggaaaaaccagaaatgacctatattaaagggg 28411186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 10027974 - 10028033
Alignment:
Q  143 attttacagagga-aaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    ||||||||||||  ||||||||||||||||||||||||| |||||||| ||||| |||||    
T  10027974 attttacagaggggaaaaccagaaatgacctatattacagggggtaaagacctattaacc 10028033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 15336432 - 15336393
Alignment:
Q  145 tttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  15336432 tttacaggggaaaaaccaaaaatgacctatattacagggg 15336393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 45832218 - 45832163
Alignment:
Q  145 tttacagaggaaaaaccagaaatgacctatattacaggggtaaatacctaataacc 200  Q
    ||||||| |||||||||| || ||| ||||||||||||| |||||||||| |||||    
T  45832218 tttacagtggaaaaaccaaaagtgatctatattacagggataaatacctattaacc 45832163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 972901 - 972859
Alignment:
Q  143 attttacagaggaaaaa-ccagaaatgacctatattacagggg 184  Q
    ||||||||||||||||| ||| |||||||||||||||||||||    
T  972901 attttacagaggaaaaaaccaaaaatgacctatattacagggg 972859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 200
Target Start/End: Original strand, 13545812 - 13545862
Alignment:
Q  151 gaggaaaaaccagaaatgacctatattacagg-ggtaaatacctaataacc 200  Q
    ||||||||||| |||||||||||||||||||| ||||||||| || |||||    
T  13545812 gaggaaaaaccggaaatgacctatattacaggaggtaaatacatattaacc 13545862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 42736819 - 42736877
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg-taaatacctaataacc 200  Q
    ||||||||| || |||||| |||||||||||||||||||||| |||| ||||| |||||    
T  42736819 attttacagggggaaaaccggaaatgacctatattacaggggataaagacctattaacc 42736877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 185
Target Start/End: Complemental strand, 2472436 - 2472407
Alignment:
Q  156 aaaaccagaaatgacctatattacaggggt 185  Q
    ||||||||||||||||||||||||||||||    
T  2472436 aaaaccagaaatgacctatattacaggggt 2472407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 185
Target Start/End: Original strand, 7611435 - 7611464
Alignment:
Q  156 aaaaccagaaatgacctatattacaggggt 185  Q
    ||||||||||||||||||||||||||||||    
T  7611435 aaaaccagaaatgacctatattacaggggt 7611464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 10490235 - 10490276
Alignment:
Q  144 ttttacagagga-aaaaccagaaatgacctatattacagggg 184  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  10490235 ttttacagaggataaaaccaaaaatgacctatattacagggg 10490276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 15790470 - 15790511
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| |  |||||||||||||||||||||||||||||    
T  15790470 attttacagggtgaaaaccagaaatgacctatattacagggg 15790511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 21853475 - 21853434
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    |||||||||  | |||||||||||||||||||||||||||||    
T  21853475 attttacaggaggaaaaccagaaatgacctatattacagggg 21853434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 23889736 - 23889695
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || |||||| ||||||||||||||||||||||    
T  23889736 attttacagggggaaaaccggaaatgacctatattacagggg 23889695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 31883775 - 31883820
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggggtaaa 188  Q
    |||||||| ||| ||||||| ||||||| |||||||||||||||||    
T  31883775 attttacaaagggaaaaccaaaaatgacatatattacaggggtaaa 31883820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 180
Target Start/End: Complemental strand, 46561445 - 46561409
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattaca 180  Q
    |||||||||||||||| |||||||||||||||||||||    
T  46561445 attttacagaggaaaa-ccagaaatgacctatattaca 46561409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 16699102 - 16699138
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattac 179  Q
    ||||||| | |||||||||||||||||||||||||||    
T  16699102 attttaccggggaaaaaccagaaatgacctatattac 16699138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 31532487 - 31532523
Alignment:
Q  143 attttacagagg-aaaaaccagaaatgacctatatta 178  Q
    |||||||||||| ||||||||||||||||||||||||    
T  31532487 attttacagagggaaaaaccagaaatgacctatatta 31532523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 7918 - 7860
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    ||||||||| || ||||||||||||||| ||||||||| |||||||| ||||| |||||    
T  7918 attttacagggggaaaaccagaaatgacatatattacagggggtaaagacctattaacc 7860  T

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Target: scaffold0450; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 8093 - 8151
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacag-gggtaaatacctaataacc 200  Q
    ||||||||  || |||||||||||||||||||||||||| ||||||| ||||| |||||    
T  8093 attttacaaggggaaaaccagaaatgacctatattacagtgggtaaagacctattaacc 8151  T

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Target: scaffold0769 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 3974 - 3933
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || |||||| ||||||||||||||||||||||    
T  3974 attttacagggggaaaaccggaaatgacctatattacagggg 3933  T

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Target: scaffold0740 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 3705 - 3648
Alignment:
Q  144 ttttacagaggaaaaaccagaaatgacctatattacagggg-taaatacctaataacc 200  Q
    |||||||| ||||||||  |||||||||||||||||||||| ||||| |||| |||||    
T  3705 ttttacaggggaaaaactggaaatgacctatattacaggggataaatgcctattaacc 3648  T

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Target: scaffold0597 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 6476 - 6517
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| |||||||| | |||||||||||||||||||||    
T  6476 attttacaggggaaaaacaaaaaatgacctatattacagggg 6517  T

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Target: scaffold0079 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 6870 - 6829
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || ||||||| |||||||||||||||||||||    
T  6870 attttacagggggaaaaccataaatgacctatattacagggg 6829  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 150046 - 150005
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacagggg 184  Q
    ||||||||| || ||||||| |||||||||||||||||||||    
T  150046 attttacagggggaaaaccaaaaatgacctatattacagggg 150005  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 342481 - 342436
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattacaggggtaaa 188  Q
    |||||||||||| ||||| | ||||||||||||| |||||||||||    
T  342481 attttacagagggaaaacaaaaaatgacctatataacaggggtaaa 342436  T

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Target: scaffold0727 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 892 - 836
Alignment:
Q  146 ttacagaggaaaaaccagaaatgacctatattacag-gggtaaatacctaataacct 201  Q
    ||||||| ||||||| |||||||||||||||||||| || |||| ||||| ||||||    
T  892 ttacagaagaaaaactagaaatgacctatattacagaggataaagacctattaacct 836  T

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Target: scaffold0727; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 1150 - 1198
Alignment:
Q  153 ggaaaaaccagaaatgacctatattac-aggggtaaatacctaataacc 200  Q
    ||||||||||||||||||||||||||| |||| |||| ||||| |||||    
T  1150 ggaaaaaccagaaatgacctatattacaagggataaagacctattaacc 1198  T

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Target: scaffold0555 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 6732 - 6700
Alignment:
Q  156 aaaaccagaaatgacctatattacaggggtaaa 188  Q
    ||||||||||||||| |||||||||||||||||    
T  6732 aaaaccagaaatgacatatattacaggggtaaa 6700  T

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Target: scaffold0142 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 34629 - 34570
Alignment:
Q  143 attttacagaggaaaaaccagaaatgacctatattac--aggggtaaatacctaataacc 200  Q
    ||||||||| || |||||| |||||||||||||||||  ||||||||| ||||| |||||    
T  34629 attttacagggggaaaaccggaaatgacctatattacaaaggggtaaagacctattaacc 34570  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 91107 - 91051
Alignment:
Q  145 tttacagaggaaaaaccagaaatgacctatattaca-ggggtaaatacctaataacc 200  Q
    ||||||| || ||||| ||||||||||||||||||| |||||||| ||||| |||||    
T  91107 tttacagggggaaaactagaaatgacctatattacagggggtaaagacctattaacc 91051  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 184
Target Start/End: Original strand, 2070 - 2098
Alignment:
Q  156 aaaaccagaaatgacctatattacagggg 184  Q
    |||||||||||||||||||||||||||||    
T  2070 aaaaccagaaatgacctatattacagggg 2098  T

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