View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20218_high_17 (Length: 270)

Name: NF20218_high_17
Description: NF20218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20218_high_17
NF20218_high_17
[»] chr4 (36 HSPs)
chr4 (19-255)||(34115703-34115939)
chr4 (18-128)||(3168996-3169104)
chr4 (18-116)||(1645991-1646089)
chr4 (18-116)||(9661819-9661917)
chr4 (18-116)||(16991838-16991936)
chr4 (18-116)||(4634249-4634347)
chr4 (18-116)||(54420762-54420860)
chr4 (18-106)||(30416671-30416760)
chr4 (18-85)||(28588558-28588626)
chr4 (18-85)||(23067898-23067965)
chr4 (18-85)||(41486572-41486639)
chr4 (18-136)||(46728970-46729085)
chr4 (18-116)||(3673589-3673687)
chr4 (18-85)||(52555771-52555838)
chr4 (18-100)||(7242819-7242901)
chr4 (18-116)||(51646059-51646157)
chr4 (48-116)||(1657650-1657718)
chr4 (40-117)||(43156741-43156819)
chr4 (18-149)||(6408374-6408504)
chr4 (18-150)||(37869467-37869596)
chr4 (18-83)||(46775906-46775971)
chr4 (18-75)||(53903617-53903674)
chr4 (18-114)||(14542562-14542658)
chr4 (18-85)||(42972035-42972102)
chr4 (18-68)||(38434612-38434662)
chr4 (18-90)||(12519649-12519720)
chr4 (18-145)||(28990237-28990362)
chr4 (18-85)||(4959626-4959692)
chr4 (32-85)||(4622775-4622828)
chr4 (18-66)||(9549483-9549531)
chr4 (18-71)||(38546158-38546215)
chr4 (37-85)||(44375333-44375381)
chr4 (18-70)||(46716944-46716996)
chr4 (18-85)||(5388512-5388579)
chr4 (26-72)||(11817082-11817128)
chr4 (26-96)||(29577143-29577213)
[»] chr8 (35 HSPs)
chr8 (18-128)||(9269977-9270085)
chr8 (18-116)||(31874050-31874148)
chr8 (18-85)||(9992662-9992729)
chr8 (18-116)||(36545831-36545929)
chr8 (18-116)||(284525-284623)
chr8 (18-116)||(631254-631352)
chr8 (18-116)||(817066-817164)
chr8 (39-112)||(10042731-10042804)
chr8 (18-106)||(15665515-15665603)
chr8 (25-136)||(16937396-16937505)
chr8 (18-106)||(37658942-37659030)
chr8 (18-85)||(8054858-8054925)
chr8 (19-77)||(17019109-17019167)
chr8 (19-77)||(17549546-17549604)
chr8 (18-100)||(26937507-26937589)
chr8 (18-116)||(32061760-32061858)
chr8 (20-85)||(15237689-15237754)
chr8 (18-106)||(32256771-32256860)
chr8 (18-114)||(44295284-44295380)
chr8 (26-85)||(5989627-5989686)
chr8 (18-116)||(13864325-13864423)
chr8 (18-116)||(3680887-3680987)
chr8 (37-128)||(23766698-23766785)
chr8 (18-76)||(1215389-1215447)
chr8 (18-84)||(14530958-14531024)
chr8 (18-76)||(32412797-32412854)
chr8 (32-97)||(7269528-7269593)
chr8 (18-71)||(16808889-16808941)
chr8 (37-116)||(14327445-14327524)
chr8 (18-69)||(16996937-16996987)
chr8 (18-71)||(5917791-5917843)
chr8 (37-102)||(13977381-13977446)
chr8 (50-150)||(14115875-14115972)
chr8 (19-59)||(5327989-5328029)
chr8 (21-85)||(31147854-31147917)
[»] chr7 (37 HSPs)
chr7 (18-116)||(47749700-47749798)
chr7 (18-116)||(24470361-24470459)
chr7 (18-116)||(24475309-24475407)
chr7 (18-92)||(43807200-43807274)
chr7 (18-116)||(49166893-49166991)
chr7 (18-106)||(23732443-23732531)
chr7 (18-85)||(25855270-25855337)
chr7 (18-116)||(8611672-8611770)
chr7 (18-116)||(40775233-40775331)
chr7 (18-85)||(30992873-30992940)
chr7 (18-115)||(29804726-29804823)
chr7 (18-85)||(26017708-26017775)
chr7 (18-73)||(37399635-37399690)
chr7 (18-106)||(28015332-28015421)
chr7 (18-71)||(42490713-42490766)
chr7 (18-85)||(7985889-7985956)
chr7 (39-130)||(8319267-8319357)
chr7 (22-85)||(24045287-24045349)
chr7 (33-112)||(35141818-35141897)
chr7 (18-77)||(44681467-44681525)
chr7 (18-116)||(21329346-21329443)
chr7 (18-71)||(33530518-33530571)
chr7 (18-77)||(16263392-16263452)
chr7 (18-85)||(13008723-13008789)
chr7 (18-84)||(21552505-21552571)
chr7 (18-79)||(10250531-10250592)
chr7 (18-73)||(5025105-5025161)
chr7 (18-85)||(23177632-23177699)
chr7 (48-96)||(38649438-38649486)
chr7 (41-85)||(47156393-47156437)
chr7 (34-73)||(36350222-36350261)
chr7 (39-106)||(41748572-41748639)
chr7 (38-84)||(14734120-14734166)
chr7 (18-71)||(35661535-35661588)
chr7 (18-70)||(39090127-39090180)
chr7 (18-78)||(35135233-35135293)
chr7 (18-78)||(46918406-46918464)
[»] chr3 (40 HSPs)
chr3 (18-116)||(20201108-20201206)
chr3 (18-116)||(20203290-20203388)
chr3 (18-116)||(50519756-50519854)
chr3 (19-150)||(21803464-21803593)
chr3 (18-116)||(1165446-1165544)
chr3 (18-116)||(35501809-35501906)
chr3 (18-116)||(40462045-40462143)
chr3 (18-116)||(22286799-22286897)
chr3 (18-106)||(2598059-2598147)
chr3 (18-116)||(41882458-41882556)
chr3 (18-150)||(1220265-1220395)
chr3 (18-128)||(25374120-25374227)
chr3 (18-116)||(43029649-43029747)
chr3 (18-145)||(22843990-22844116)
chr3 (18-150)||(43839568-43839696)
chr3 (18-74)||(14741375-14741431)
chr3 (25-77)||(45664234-45664286)
chr3 (18-112)||(20251621-20251716)
chr3 (18-117)||(43242776-43242875)
chr3 (32-93)||(7656541-7656600)
chr3 (23-116)||(37051590-37051683)
chr3 (32-85)||(53426801-53426854)
chr3 (18-70)||(34766992-34767043)
chr3 (47-106)||(913397-913456)
chr3 (18-65)||(29182658-29182705)
chr3 (18-106)||(42106087-42106176)
chr3 (18-118)||(50460158-50460256)
chr3 (18-69)||(3088712-3088763)
chr3 (18-85)||(33076309-33076376)
chr3 (18-109)||(36540722-36540812)
chr3 (18-100)||(40797015-40797097)
chr3 (36-106)||(1806528-1806598)
chr3 (18-84)||(33070152-33070218)
chr3 (32-85)||(4019599-4019651)
chr3 (21-137)||(11846562-11846676)
chr3 (27-64)||(29776747-29776784)
chr3 (18-116)||(33977972-33978068)
chr3 (18-72)||(26412342-26412396)
chr3 (23-130)||(21085995-21086100)
chr3 (19-63)||(47914644-47914687)
[»] chr2 (36 HSPs)
chr2 (18-150)||(40125323-40125453)
chr2 (18-116)||(6089859-6089957)
chr2 (18-116)||(25516460-25516558)
chr2 (18-116)||(27191385-27191483)
chr2 (18-116)||(27841199-27841297)
chr2 (18-116)||(44167759-44167857)
chr2 (23-114)||(5930391-5930482)
chr2 (18-85)||(7640406-7640473)
chr2 (18-116)||(41176828-41176927)
chr2 (18-155)||(41841878-41842014)
chr2 (18-116)||(3390398-3390496)
chr2 (18-116)||(25771411-25771509)
chr2 (18-116)||(26491269-26491367)
chr2 (18-106)||(10589014-10589103)
chr2 (18-106)||(29812665-29812753)
chr2 (18-106)||(42105802-42105890)
chr2 (18-116)||(3464925-3465023)
chr2 (18-106)||(25623095-25623183)
chr2 (18-129)||(27024189-27024298)
chr2 (18-116)||(3602951-3603049)
chr2 (18-116)||(37883619-37883717)
chr2 (18-116)||(43566843-43566939)
chr2 (18-116)||(36507897-36507995)
chr2 (33-85)||(16880024-16880076)
chr2 (18-78)||(44441390-44441450)
chr2 (18-84)||(5071420-5071486)
chr2 (18-77)||(29734194-29734254)
chr2 (18-129)||(34479911-34480020)
chr2 (18-136)||(13268520-13268637)
chr2 (39-85)||(15674045-15674091)
chr2 (18-79)||(19581052-19581114)
chr2 (18-64)||(19953588-19953634)
chr2 (18-112)||(9715594-9715689)
chr2 (18-79)||(2251395-2251456)
chr2 (23-84)||(3398034-3398095)
chr2 (18-150)||(25237376-25237506)
[»] scaffold1294 (1 HSPs)
scaffold1294 (18-136)||(728-844)
[»] chr6 (19 HSPs)
chr6 (18-89)||(20845001-20845072)
chr6 (18-116)||(16913294-16913392)
chr6 (18-85)||(19759785-19759852)
chr6 (18-79)||(548915-548976)
chr6 (18-116)||(4663870-4663968)
chr6 (18-79)||(15128199-15128260)
chr6 (18-78)||(32457650-32457710)
chr6 (18-116)||(12576528-12576626)
chr6 (18-116)||(31747926-31748022)
chr6 (32-150)||(32574387-32574503)
chr6 (18-112)||(7049217-7049310)
chr6 (18-106)||(8644221-8644309)
chr6 (18-85)||(32804291-32804359)
chr6 (18-116)||(891554-891652)
chr6 (18-64)||(1944114-1944160)
chr6 (18-85)||(13234158-13234224)
chr6 (18-85)||(33194602-33194669)
chr6 (39-116)||(10744545-10744622)
chr6 (18-75)||(22530287-22530344)
[»] scaffold0045 (1 HSPs)
scaffold0045 (20-116)||(9700-9796)
[»] chr5 (30 HSPs)
chr5 (33-116)||(34893981-34894064)
chr5 (18-116)||(28618570-28618668)
chr5 (18-129)||(6887228-6887337)
chr5 (18-134)||(15710490-15710606)
chr5 (18-128)||(4070512-4070618)
chr5 (18-85)||(6647963-6648030)
chr5 (18-150)||(2415334-2415464)
chr5 (18-115)||(19646091-19646188)
chr5 (18-90)||(41358030-41358103)
chr5 (18-89)||(4726978-4727049)
chr5 (18-116)||(31645795-31645893)
chr5 (40-117)||(37424958-37425035)
chr5 (18-150)||(41988118-41988248)
chr5 (18-85)||(9034998-9035065)
chr5 (18-116)||(33486619-33486718)
chr5 (18-116)||(41554452-41554551)
chr5 (18-79)||(41063446-41063507)
chr5 (18-73)||(29154264-29154318)
chr5 (18-85)||(29310399-29310466)
chr5 (39-85)||(18472796-18472842)
chr5 (18-67)||(5378317-5378366)
chr5 (48-112)||(34950446-34950511)
chr5 (47-106)||(8812231-8812290)
chr5 (18-53)||(34866456-34866491)
chr5 (18-79)||(13079143-13079202)
chr5 (18-85)||(11052875-11052942)
chr5 (18-79)||(13007690-13007749)
chr5 (18-75)||(13080154-13080210)
chr5 (18-63)||(28500736-28500781)
chr5 (18-63)||(34873880-34873925)
[»] chr1 (39 HSPs)
chr1 (18-85)||(38646581-38646648)
chr1 (18-85)||(44562799-44562866)
chr1 (18-116)||(6212936-6213034)
chr1 (18-150)||(14717293-14717422)
chr1 (18-85)||(5832230-5832297)
chr1 (19-100)||(10877327-10877409)
chr1 (18-116)||(22344962-22345060)
chr1 (18-75)||(8893300-8893357)
chr1 (18-74)||(23320448-23320504)
chr1 (18-85)||(630835-630902)
chr1 (18-85)||(35077940-35078007)
chr1 (18-79)||(45659045-45659106)
chr1 (18-106)||(17579744-17579832)
chr1 (18-65)||(4564535-4564582)
chr1 (18-77)||(21326478-21326537)
chr1 (18-116)||(29067022-29067114)
chr1 (18-84)||(13691808-13691874)
chr1 (19-65)||(40992351-40992397)
chr1 (18-71)||(15276500-15276553)
chr1 (34-107)||(52839496-52839569)
chr1 (18-74)||(52752036-52752092)
chr1 (39-134)||(52839373-52839466)
chr1 (18-116)||(30853832-30853931)
chr1 (18-116)||(44514039-44514138)
chr1 (18-100)||(48655116-48655198)
chr1 (19-74)||(34659680-34659735)
chr1 (18-77)||(49651840-49651899)
chr1 (27-112)||(2875625-2875710)
chr1 (18-100)||(46589158-46589238)
chr1 (18-106)||(22032140-22032228)
chr1 (18-62)||(1767986-1768030)
chr1 (18-62)||(23257108-23257152)
chr1 (18-85)||(33703559-33703626)
chr1 (18-62)||(40488447-40488491)
chr1 (18-100)||(12148098-12148180)
chr1 (18-52)||(15698230-15698264)
chr1 (18-75)||(32539240-32539298)
chr1 (40-78)||(37685168-37685206)
chr1 (40-78)||(37700312-37700350)
[»] scaffold0722 (1 HSPs)
scaffold0722 (18-92)||(5576-5650)
[»] scaffold0340 (1 HSPs)
scaffold0340 (18-78)||(11827-11887)
[»] scaffold0150 (1 HSPs)
scaffold0150 (19-77)||(10376-10434)
[»] scaffold0316 (1 HSPs)
scaffold0316 (18-79)||(12253-12314)
[»] scaffold0011 (1 HSPs)
scaffold0011 (18-116)||(10985-11083)
[»] scaffold0157 (1 HSPs)
scaffold0157 (18-90)||(1191-1262)
[»] scaffold0024 (1 HSPs)
scaffold0024 (18-70)||(36541-36593)
[»] scaffold0012 (1 HSPs)
scaffold0012 (18-62)||(244656-244700)
[»] scaffold0009 (1 HSPs)
scaffold0009 (36-106)||(105028-105098)
[»] scaffold0665 (1 HSPs)
scaffold0665 (50-150)||(1174-1271)


Alignment Details
Target: chr4 (Bit Score: 157; Significance: 2e-83; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 34115703 - 34115939
Alignment:
Q  19 tttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaaa 118  Q
    |||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||| ||||||| |||| ||||||  |||||||||||||||||    
T  34115703 tttcaataaaagggaaagagaaaaacgaactagaggggtgattttgggtcaaaaattgaccctaaattatctctctttggtagatgaatgagaagaaaaa 34115802  T
Q  119 ctagagttttgacgacggttgacaagagagaatgaaatcgctatcttatctaatattctagtttttgtagaagtgtagtgtgggctagctctagttcccc 218  Q
     || | |||||  |||||||||| ||| ||||||  ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34115803 ttaaaattttggtgacggttgacgagaaagaatgtcatcgctatcttgtctagtattctagtttttgtagaagtgtagtgtgggctagctctagttcccc 34115902  T
Q  219 ccattctttaaaaccttgatattatttgtctatttct 255  Q
    |||||||||||||||||||||| ||||||||||||||    
T  34115903 ccattctttaaaaccttgatatgatttgtctatttct 34115939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 3169104 - 3168996
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||  ||||| |||||| |||||||||||||  |||  ||||    
T  3169104 atttcaataaaagagaaagaaaaaaacgagttagaggggtgattttgggtcaataattgactctaaatcacctctctttggtgaatgaagaaga--aaaa 3169007  T
Q  118 actagagtttt 128  Q
    |||||||||||    
T  3169006 actagagtttt 3168996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 1645991 - 1646089
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||| | |||| |||||||||||||  ||||||||    
T  1645991 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaacaattaaccctaaatcatctctctttggtgaatgaagaagaagaaa 1646089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 9661917 - 9661819
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||| ||||| ||| || |||| || ||||| |||||||||    
T  9661917 atttcaataaaagggaaaaagaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggagaagaaa 9661819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 16991936 - 16991838
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||| ||||| ||| || |||| || ||||| |||||||||    
T  16991936 atttcaataaaagggaaatagaaaaacgagttagatgggtgattttgggtcaaaaattgaccctaaatcaccgctctttgatggatgaaggagaagaaa 16991838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 4634347 - 4634249
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||||||| ||||| ||| || |||| || ||||| |||||||||    
T  4634347 atttcaataaaagggaaaaggaaaaacaagttagaggggtgattttgggtcaaaaattgaccttaaatcacccctctttgatggatgaaggagaagaaa 4634249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 54420762 - 54420860
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||||||||||||  ||| |||||||||||||||||| |||||||||||||||||||||||| ||||| |||  | ||||||| ||||| |||||||||    
T  54420762 atttcaataaaaggaaaatagaaaaacgagttagaggagtgattttgggtcaaaaattgaccctaaatcacccatctttggtggatgaaggagaagaaa 54420860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 30416671 - 30416760
Alignment:
Q  18 atttcaataaaagagaaagagaaaaa-cgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaa 106  Q
    ||||||||||||| |||| ||||||| | ||||||||| |||||||||| ||||||||||||||||||||||| |||||||||| |||||    
T  30416671 atttcaataaaagggaaatagaaaaaacaagttagaggtgtgattttggttcaaaaattgaccataaattacccctttttggtggatgaa 30416760  T

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Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 28588626 - 28588558
Alignment:
Q  18 atttcaataaaa-gagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28588626 atttcaataaaaagggaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaat 28588558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 23067898 - 23067965
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  23067898 atttcaataaaagggaaatagaaaaacgagttagaggggtgatttagggtcaaaaattgaccctaaat 23067965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 41486639 - 41486572
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  41486639 atttcaatataagggaaagagaaaaacgagttagaggggtgattttggatcaaaaattgaccctaaat 41486572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 46728970 - 46729085
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    ||||||||||||| |||| |||||||| | |||||||| ||||||||||||||||||||||| ||||| ||| || ||||||| ||||| | ||  ||||    
T  46728970 atttcaataaaagggaaatagaaaaacaaattagaggg-tgattttgggtcaaaaattgaccctaaatcacccctctttggtggatgaaagtga--aaaa 46729066  T
Q  118 actagagttttgacgacgg 136  Q
    ||||||||||||| |||||    
T  46729067 actagagttttgatgacgg 46729085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 3673687 - 3673589
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||| |||||||  ||| ||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||| || ||||||| || ||||||||||||    
T  3673687 atttaaataaaaaggaaggagaaaaacgatttagaggggtgatttggggtcaaaaattgaccctaaatcacccctctttggtggataaatgagaagaaa 3673589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 52555771 - 52555838
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    |||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||| || |||||    
T  52555771 atttcaataaaagataaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaat 52555838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 7242819 - 7242901
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtg 100  Q
    |||||||||||| | |||||||||||| |||||||  ||||||||||||||||||||||||| |||||  || ||||||||||    
T  7242819 atttcaataaaataaaaagagaaaaacaagttagaaaggtgattttgggtcaaaaattgaccctaaatcgcccctttttggtg 7242901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 51646157 - 51646059
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||| | |||||||| |||||||||||||||| ||| ||||||||||||||||| | |||| |||| || ||||| | |||||||    
T  51646157 atttcaataaaagggaaataaaaaaacgaattagaggggtgattttaggttaaaaattgaccataaatcatctctctttgatggatgaaggtgaagaaa 51646059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 1657650 - 1657718
Alignment:
Q  48 ttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||||||||||||||||||||||||||||||| ||||| |||||| |||| || ||||| |||||||||    
T  1657650 ttagaggggtgattttgggtcaaaaattgaccctaaatcacctctctttgatggatgaaggagaagaaa 1657718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 43156819 - 43156741
Alignment:
Q  40 aaaacgagttagaggggtgattttgggtcaaaaattga-ccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    |||||| ||||||||||||||||||||||||||||||| || ||||| ||| || ||||||| ||||| ||||||||||    
T  43156819 aaaacgtgttagaggggtgattttgggtcaaaaattgacccgtaaatcacccctctttggtggatgaaggagaagaaaa 43156741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 6408504 - 6408374
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacct-ctttttggtgaatgaatgagaagaaa 116  Q
    ||||||| ||||| |||| | |||||||||||| || ||||||||||||| ||||||||||| | ||| |||| || ||||||| ||||| ||||||  |    
T  6408504 atttcaacaaaagggaaatataaaaacgagttaaagaggtgattttgggtaaaaaattgacccttaatcacctcctctttggtggatgaaggagaag--a 6408407  T
Q  117 aactagagttttgacgacggttgacaagagaga 149  Q
    ||||||||| |||| ||||  | ||||||||||    
T  6408406 aactagagtattgatgacgactcacaagagaga 6408374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 37869467 - 37869596
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    ||||||||||||| |||||| ||||||||||||||||| ||||||| ||| || |||||||| ||||| || ||| |||  || ||||| ||||||  ||    
T  37869467 atttcaataaaagggaaagataaaaacgagttagagggatgatttt-ggtaaacaattgaccctaaatcacatctctttaatggatgaaggagaag--aa 37869563  T
Q  118 actagagttttgacgacggttgacaagagagaa 150  Q
    ||||| ||||||  ||||| | |||||||||||    
T  37869564 actagggttttggtgacggctcacaagagagaa 37869596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 46775906 - 46775971
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataa 83  Q
    |||||||| |||| |||||||||||||||| ||||| | ||||||||||||||||||||| |||||    
T  46775906 atttcaattaaagggaaagagaaaaacgagatagagtgatgattttgggtcaaaaattgatcataa 46775971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 53903674 - 53903617
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaatt 75  Q
    ||||||||||||| |||| |||||||||||||||||| ||||||| ||||||||||||    
T  53903674 atttcaataaaagggaaatagaaaaacgagttagaggagtgatttagggtcaaaaatt 53903617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 14542562 - 14542658
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaaga 114  Q
    ||||||||||||  ||||  ||||||| |||||||| | ||||||||||||||||||||||| ||||| ||| || |||| || ||||| |||||||    
T  14542562 atttcaataaaaaggaaaaggaaaaacaagttagagagatgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggagaaga 14542658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 42972102 - 42972035
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    |||||||||||||  ||| |||||||| ||||||| | |||||||||||||||||||||||| |||||    
T  42972102 atttcaataaaagcaaaatagaaaaacaagttagatgagtgattttgggtcaaaaattgaccctaaat 42972035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 38434662 - 38434612
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtc 68  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| |||||    
T  38434662 attttaataaaagagaaatagaaaaacgagttagaggggtgatttcgggtc 38434612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 12519720 - 12519649
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacct 90  Q
    ||||||||||||| ||||||||||||||||||||| |  |||||||| ||| |||||||| ||||||| ||||    
T  12519720 atttcaataaaagggaaagagaaaaacgagttagatgattgattttgagtc-aaaattgatcataaatcacct 12519649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 28990362 - 28990237
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    ||||||||||||||||||||||||||||||||||| |  | |||||      ||||||||| |||||| |||||| || |||  ||||| ||||||  ||    
T  28990362 atttcaataaaagagaaagagaaaaacgagttagatgaataatttttttgttaaaattgactataaatcacctctcttaggtatatgaaggagaag--aa 28990265  T
Q  118 actagagttttgacgacggttgacaaga 145  Q
    |||||||| || | ||||||||||||||    
T  28990264 actagagtatttatgacggttgacaaga 28990237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 4959626 - 4959692
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||| | |||||||||||| ||||||||| | ||||||||| ||||||||||||| |||||    
T  4959626 atttcaataaacg-gaaagagaaaaatgagttagagtgatgattttggatcaaaaattgaccctaaat 4959692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 4622775 - 4622828
Alignment:
Q  32 gaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    |||||||||||||||| || || ||||||||||| ||||||||||||| |||||    
T  4622775 gaaagagaaaaacgagatacagaggtgattttggatcaaaaattgaccttaaat 4622828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 9549531 - 9549483
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttggg 66  Q
    |||||||||||||  |||||||||||||||||||| | |||||||||||    
T  9549531 atttcaataaaaggaaaagagaaaaacgagttagaagtgtgattttggg 9549483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 38546158 - 38546215
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgag----ttagaggggtgattttgggtcaaa 71  Q
    |||||||||||| ||||||| |||||||||    ||||||||||||||||||||||||    
T  38546158 atttcaataaaaaagaaagaaaaaaacgagcgagttagaggggtgattttgggtcaaa 38546215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 44375333 - 44375381
Alignment:
Q  37 agaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    |||||||||| ||||||| ||||||||| |||||||||||||| |||||    
T  44375333 agaaaaacgaattagaggagtgattttgagtcaaaaattgaccttaaat 44375381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 46716944 - 46716996
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaa 70  Q
    |||||||||||||  ||| ||||||||||||||||| |||||||| |||||||    
T  46716944 atttcaataaaaggaaaatagaaaaacgagttagagaggtgatttagggtcaa 46716996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 5388579 - 5388512
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    |||| ||||| || ||| ||||||||||| |||||||||||||||  | ||||||||||||| |||||    
T  5388579 atttaaataagagggaaggagaaaaacgatttagaggggtgatttgagttcaaaaattgaccctaaat 5388512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 11817128 - 11817082
Alignment:
Q  26 aaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaa 72  Q
    ||||| ||| |||||||||||  ||||||||||||||||||||||||    
T  11817128 aaaagggaaggagaaaaacgatgtagaggggtgattttgggtcaaaa 11817082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 29577143 - 29577213
Alignment:
Q  26 aaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctcttttt 96  Q
    |||| ||||| ||||||||||| ||||||||  |||||| |||||||| ||||| ||||| ||| ||||||    
T  29577143 aaaaaagaaaaagaaaaacgagatagaggggatattttgagtcaaaaagtgaccctaaatcaccccttttt 29577213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 8e-33; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 9270085 - 9269977
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||||||| ||||| ||||||  ||    
T  9270085 atttcaataaaagggaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgatcataaatcacccctctttggtggatgaaggagaag--aa 9269988  T
Q  118 actagagtttt 128  Q
    |||||||||||    
T  9269987 actagagtttt 9269977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 31874148 - 31874050
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||| || ||||| |||||||||    
T  31874148 atttcaataaaagggaaaaggaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacctctctttgatggatgaaggagaagaaa 31874050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 9992729 - 9992662
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9992729 atttcaataaaagggaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaat 9992662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 36545831 - 36545929
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| ||||| | | || ||||||| ||||| |||||||||    
T  36545831 atttcaataaaagggaaagagaaaaacgagttagaggggtgatattgggtcacaaattgaccttaaatcatccctctttggtggatgaaggagaagaaa 36545929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 284525 - 284623
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||| |||||| || ||||||||||||||| || ||| ||||||||||||||||||| ||||||| |||||| ||| ||| |||||||||||||||    
T  284525 atttcaacaaaagaaaatgagaaaaacgagttaaagcggtaattttgggtcaaaaattgatcataaatcacctctctttagtggatgaatgagaagaaa 284623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 631352 - 631254
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||| |||||| || ||||||||||||||| || ||| ||||||||||||||||||| ||||||| |||||| ||| ||| |||||||||||||||    
T  631352 atttcaacaaaagaaaatgagaaaaacgagttaaagcggtaattttgggtcaaaaattgatcataaatcacctctctttagtggatgaatgagaagaaa 631254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 817164 - 817066
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||| |||||| || ||||||||||||||| || ||| ||||||||||||||||||| ||||||| |||||| ||| ||| |||||||||||||||    
T  817164 atttcaacaaaagaaaatgagaaaaacgagttaaagcggtaattttgggtcaaaaattgatcataaatcacctctctttagtggatgaatgagaagaaa 817066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 10042804 - 10042731
Alignment:
Q  39 aaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||| |||||    
T  10042804 aaaaacgagttagaggggtgattttgggtcaaaaattgaccataaatcacccctctttggtggatgaaggagaa 10042731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 15665603 - 15665515
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaa 106  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||| |||||| ||||| ||| || |||| || |||||    
T  15665603 atttcaataaaagtgaaagagaaaaacaagttagaggggtgattttgtgtcaaaagttgaccctaaatcacccctctttgttggatgaa 15665515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 136
Target Start/End: Original strand, 16937396 - 16937505
Alignment:
Q  25 taaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaaactagag 124  Q
    |||||| |||| |||||||| |||||||||| ||||||||| ||||||||||||| ||||| ||| || ||||||| ||||| | ||||  ||||||| |    
T  16937396 taaaagggaaatagaaaaacaagttagagggatgattttggatcaaaaattgaccctaaatcacccctctttggtggatgaaggtgaag--aaactaggg 16937493  T
Q  125 ttttgacgacgg 136  Q
    |||||| |||||    
T  16937494 ttttgatgacgg 16937505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 37659030 - 37658942
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaa 106  Q
    ||||||||||||| |||| | |||||| | ||||||||||||||||| |||||||||||||| ||||| ||| || ||||||| |||||    
T  37659030 atttcaataaaagggaaatataaaaacaaattagaggggtgattttgtgtcaaaaattgaccctaaatcacccctctttggtggatgaa 37658942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 8054858 - 8054925
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||| ||| |||| ||||||||||||||||||| | ||||||||||||||||||||| |||||    
T  8054858 atttcaatataagggaaatagaaaaacgagttagagggataattttgggtcaaaaattgaccctaaat 8054925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 17019167 - 17019109
Alignment:
Q  19 tttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattga 77  Q
    |||||||||||| ||||||||||||| | ||||| ||||||||||||||||||||||||    
T  17019167 tttcaataaaagggaaagagaaaaacaatttagaagggtgattttgggtcaaaaattga 17019109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 17549604 - 17549546
Alignment:
Q  19 tttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattga 77  Q
    |||||||||||| ||||||||||||| | ||||| ||||||||||||||||||||||||    
T  17549604 tttcaataaaagggaaagagaaaaacaatttagaagggtgattttgggtcaaaaattga 17549546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 26937589 - 26937507
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtg 100  Q
    ||||||||||||| |||| || ||||||||||||||||||||||||| ||||||| || ||| ||||| ||| || |||||||    
T  26937589 atttcaataaaagggaaaaaggaaaacgagttagaggggtgattttgagtcaaaacttaaccctaaataacccctctttggtg 26937507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 32061858 - 32061760
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||| |||||| | ||| |||| |||||| ||||| ||||||||| |||||||||||||||| |||| |||| || ||||||| ||||| |||||||||    
T  32061858 atttaaataaaggggaaggagagaaacgatttagaagggtgatttggggtcaaaaattgaccctaaactacccctctttggtggatgaaggagaagaaa 32061760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 15237689 - 15237754
Alignment:
Q  20 ttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||| ||||||||||||||||||||| ||||||||| | || ||||||||||| |||||    
T  15237689 ttcaataaaagggaaagagaaaaacgagttagatgggtgatttagagttaaaaattgaccctaaat 15237754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 32256771 - 32256860
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggt-caaaaattgaccataaattacctctttttggtgaatgaa 106  Q
    ||||||||||||| |||| | |||||| ||||||||||||||||||||||  ||||||||||| ||||| ||| || ||||||| |||||    
T  32256771 atttcaataaaagggaaataaaaaaacaagttagaggggtgattttgggtaaaaaaattgaccctaaatcacccctctttggtggatgaa 32256860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 44295380 - 44295284
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaaga 114  Q
    ||||||||||||  ||||  ||||||| |||||||| | ||||||||||||||||||||||| ||||| ||| || |||| || ||||| |||||||    
T  44295380 atttcaataaaaaggaaaaggaaaaacaagttagagagatgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggagaaga 44295284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 5989686 - 5989627
Alignment:
Q  26 aaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||| ||||||||||||||||||||||  |||||||||||| ||||||||||| |||||    
T  5989686 aaaagggaaagagaaaaacgagttagagatgtgattttgggttaaaaattgaccctaaat 5989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 13864423 - 13864325
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||| | |||||||||||| |  ||||||||||| |||||| |||||| ||||| ||| || |||| | |||||| |||||||||    
T  13864423 atttcaataaaagggaaataaaaaaacgagttacataggtgattttggctcaaaagttgaccttaaatcacccctctttgataaatgaaggagaagaaa 13864325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 3680987 - 3680887
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggt--caaaaattgaccataaattacctctttttggtgaatgaatgagaagaa 115  Q
    |||||||||||||  |||||||||||| ||||||||  ||||||||||||   ||||||||||  ||||| ||| || ||||||| ||||| ||||||||    
T  3680987 atttcaataaaaggaaaagagaaaaacaagttagagaagtgattttgggtgaaaaaaattgactctaaatcacccctctttggtggatgaaagagaagaa 3680888  T
Q  116 a 116  Q
    |    
T  3680887 a 3680887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 128
Target Start/End: Complemental strand, 23766785 - 23766698
Alignment:
Q  37 agaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaaactagagtttt 128  Q
    ||||||||||||||   |||||||||||||||||||||||||| ||||| || ||| ||||||| |||||  |||||  |||||||||||||    
T  23766785 agaaaaacgagttat--gggtgattttgggtcaaaaattgaccttaaatcacatctctttggtggatgaagtagaag--aaactagagtttt 23766698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 1215389 - 1215447
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattg 76  Q
    |||| |||||||||||| |||||||| || |||||| |||||||| |||||||||||||    
T  1215389 atttaaataaaagagaaggagaaaaatgatttagagcggtgatttggggtcaaaaattg 1215447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 14530958 - 14531024
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaa 84  Q
    |||| |||| ||||||| ||||||||||| ||||| ||||||||| | |||||||||||||| ||||    
T  14530958 atttaaatagaagagaaggagaaaaacgatttagaagggtgatttggagtcaaaaattgaccctaaa 14531024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 32412854 - 32412797
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattg 76  Q
    ||||||||||||| ||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  32412854 atttcaataaaagggaaagggaaaa-cgagtgagaggggtgattttggatcaaaaattg 32412797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 7269528 - 7269593
Alignment:
Q  32 gaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttg 97  Q
    |||||| |||| ||||||||| ||||||||| |||||||||||||||  ||||| |||||| ||||    
T  7269528 gaaagaaaaaagcgagttagaagggtgatttagggtcaaaaattgactctaaatcacctctatttg 7269593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 16808941 - 16808889
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaa 71  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||| |||||    
T  16808941 atttcaataaaag-gaaagagaaaaatgagttagatgggtgattttggatcaaa 16808889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 14327524 - 14327445
Alignment:
Q  37 agaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||  | ||||||||| || |||||||||||||||| ||||  ||| || ||||||| ||||| |||||||||    
T  14327524 agaaaaacgatatggaggggtgaattggggtcaaaaattgaccctaaaccacccctctttggtggatgaaggagaagaaa 14327445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 16996937 - 16996987
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtca 69  Q
    |||||||||||||  ||| |||||| ||||||||||||||||||||||||||    
T  16996937 atttcaataaaaggaaaatagaaaa-cgagttagaggggtgattttgggtca 16996987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 5917791 - 5917843
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaa 71  Q
    |||| ||| |||| ||||||||||| |||| |||||||||||||||||||||||    
T  5917791 attttaattaaagggaaagagaaaa-cgagctagaggggtgattttgggtcaaa 5917843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 13977446 - 13977381
Alignment:
Q  37 agaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaa 102  Q
    |||||||||| ||||| |||| ||||||||| |||| |||||||||||| ||| || ||| |||||    
T  13977446 agaaaaacgaattagatgggtaattttgggtaaaaatttgaccataaatcacccctctttagtgaa 13977381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 14115875 - 14115972
Alignment:
Q  50 agaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaaactagagttttgacgacggttgacaagagaga 149  Q
    |||||| ||||||||||||||||||||||| ||||| |||  | ||||||| ||||| ||||||   ||||||||||| |  ||||| | ||||||||||    
T  14115875 agagggatgattttgggtcaaaaattgacc-taaatcacccatctttggtggatgaaagagaag--taactagagtttaggtgacggctcacaagagaga 14115971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 5328029 - 5327989
Alignment:
Q  19 tttcaataaaagagaaagagaaaaacgagttagaggggtga 59  Q
    ||||||||| || |||||||||||| |||||||||||||||    
T  5328029 tttcaataatagggaaagagaaaaatgagttagaggggtga 5327989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 31147854 - 31147917
Alignment:
Q  21 tcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    |||||||||| ||| ||||||||||||| ||| | |  ||||||||||||||||||||| |||||    
T  31147854 tcaataaaagggaacgagaaaaacgagt-agatgagcaattttgggtcaaaaattgaccctaaat 31147917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 47749798 - 47749700
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| || ||||||| ||||| |||||||||    
T  47749798 atttcaataaaagggaaagagaaaaacgagatagaggggtgattttgggtcaaaaattgaccataaatcacccctctttggtggatgaaggagaagaaa 47749700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 24470459 - 24470361
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| || ||||| ||| || ||||||| ||||| |||||||||    
T  24470459 atttcaataaaagggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgcccctaaatcacccctctttggtggatgaaggagaagaaa 24470361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 24475407 - 24475309
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| || ||||| ||| || ||||||| ||||| |||||||||    
T  24475407 atttcaataaaagggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgcccctaaatcacccctctttggtggatgaaggagaagaaa 24475309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 43807200 - 43807274
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctct 92  Q
    |||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  43807200 attttaataaaagagaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgaccataaatcacctct 43807274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 49166991 - 49166893
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||| |||||||| |||||||||||||||||| ||||||||||||||| ||||| |||  | ||||||| ||||| |||||||||    
T  49166991 atttcaataaaagggaaatagaaaaacaagttagaggggtgattttaggtcaaaaattgaccctaaatcacccatctttggtggatgaaggagaagaaa 49166893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 23732443 - 23732531
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaa 106  Q
    |||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||||||| ||||| ||| || |||| ||||||||    
T  23732443 atttcaataaaatagaaagagaaaaacgagttagagaagtgattttgagtcaaaaattgaccttaaatcacccctctttgatgaatgaa 23732531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 25855270 - 25855337
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||| |||||    
T  25855270 atttcaataaaagggaaagagaaaaacgagttagagggatgattttggatcaaaaattgaccctaaat 25855337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 8611672 - 8611770
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||  |||| ||||| ||| || ||| ||| ||||| |||||||||    
T  8611672 atttcaataaaagggaaatagaaaaacgagttagaggggtgatattgggtcaaaaagagaccctaaatcacccctctttcgtggatgaaggagaagaaa 8611770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 40775331 - 40775233
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| ||||  ||||||||||||| |||||||||||||| ||||||||||||| ||||| ||| || |||| || ||||| |||||||||    
T  40775331 atttcaataaaagggaaaaggaaaaacgagttataggggtgattttggatcaaaaattgaccctaaatcacccctctttgatggatgaaggagaagaaa 40775233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 30992873 - 30992940
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||| ||| |||||    
T  30992873 atttcaataaaagggaaatagaaaaacaagttagaggggtgattttgggtcaaaaattaaccttaaat 30992940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 29804726 - 29804823
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaa 115  Q
    |||| |||| ||| ||| ||||||||||| ||||||||||||||| |||||||||||||||| ||||  ||| || ||||||| |||||||| |||||    
T  29804726 atttaaatagaagggaaggagaaaaacgatttagaggggtgatttggggtcaaaaattgaccctaaaccacccctctttggtggatgaatgaaaagaa 29804823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 26017708 - 26017775
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||||| |||| | |||||||| |||||||||||||||| ||||||||||| |||||||||    
T  26017708 atttcaataaaagggaaataaaaaaacgaattagaggggtgattttaggtcaaaaattaaccataaat 26017775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 37399690 - 37399635
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaa 73  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  37399690 atttcaataaaagggaaagagaaaaacgagttagaggggtgattttaggtaaaaaa 37399635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 28015421 - 28015332
Alignment:
Q  18 atttcaataaaagagaaagagaaaaa-cgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaa 106  Q
    ||||||||||||| |||| ||||||| | |||||||||||||||||||| ||||||||||||| ||||| ||| || ||| ||| |||||    
T  28015421 atttcaataaaagggaaatagaaaaaacaagttagaggggtgattttggatcaaaaattgaccctaaatcacccctctttagtggatgaa 28015332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 42490766 - 42490713
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaa 71  Q
    ||||| ||||||| |||| |||||||||||||||||||||||||||||||||||    
T  42490766 atttcgataaaagggaaaaagaaaaacgagttagaggggtgattttgggtcaaa 42490713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 7985956 - 7985889
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||| ||| |||||||||||||||||||||||| || |||| |||||||| |||||| |||||    
T  7985956 atttcaatagaagggaaagagaaaaacgagttagagggatggttttaggtcaaaagttgaccctaaat 7985889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 8319357 - 8319267
Alignment:
Q  39 aaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaaactagagttttga 130  Q
    |||||||||||| | ||||||||||||||||||| |||||||||||| ||  || ||||||| || || |||||| |||||||| |||||||    
T  8319357 aaaaacgagttacatgggtgattttgggtcaaaagttgaccataaatcactcctctttggtggataaaggagaag-aaaactagggttttga 8319267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 24045287 - 24045349
Alignment:
Q  22 caataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||| |||||||||||| | |||||| |||||||||||||||||||||||||| |||||    
T  24045287 caataaaag-gaaagagaaaaatgtgttagacgggtgattttgggtcaaaaattgaccttaaat 24045349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 35141818 - 35141897
Alignment:
Q  33 aaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaa 112  Q
    ||||| ||||| |||||||| |||||||||| ||||||||||||||| ||||| |||  | ||||||||||||| |||||    
T  35141818 aaagacaaaaatgagttagaagggtgatttttggtcaaaaattgaccctaaatcacccttctttggtgaatgaaggagaa 35141897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 44681525 - 44681467
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattga 77  Q
    ||||||||||||| |||| |||||||||||||||| |||||||||| |||||||||||||    
T  44681525 atttcaataaaagggaaaaagaaaaacgagttaga-gggtgattttaggtcaaaaattga 44681467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 21329346 - 21329443
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||| |||| ||| ||| ||| ||||||| ||||||||||||||| |||||||||||||||| ||||  ||| || ||||||| || ||||||||||||    
T  21329346 atttaaatagaagggaatgaggaaaacgatttagaggggtgattt-gggtcaaaaattgaccctaaaccacccctctttggtggataaatgagaagaaa 21329443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 33530518 - 33530571
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaa 71  Q
    |||||||||||| ||||| ||||||||| |||||||||||| ||||||||||||    
T  33530518 atttcaataaaaaagaaaaagaaaaacgggttagaggggtggttttgggtcaaa 33530571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 16263452 - 16263392
Alignment:
Q  18 atttcaataaaagagaaagag-aaaaacgagttagaggggtgattttgggtcaaaaattga 77  Q
    |||||||||||||||||| || |||||| |||||||| ||||||||||| |||||||||||    
T  16263452 atttcaataaaagagaaataggaaaaacaagttagagaggtgattttggatcaaaaattga 16263392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 13008723 - 13008789
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||||||||||||||||||| ||||||| |||| ||||||  | ||||||||||| |||||    
T  13008723 atttcaataaaagagaaagagaaaaactagttaga-gggttattttgaattaaaaattgaccctaaat 13008789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 21552505 - 21552571
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaa 84  Q
    |||| |||||||||||| ||||||||||| |||||| |||||||| || ||||||||| ||| ||||    
T  21552505 atttaaataaaagagaaggagaaaaacgatttagagaggtgatttgggttcaaaaattaaccctaaa 21552571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 10250531 - 10250592
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgacc 79  Q
    ||||||||||||  |||  |||||||||| |||||||||||||||||| || ||||||||||    
T  10250531 atttcaataaaaaggaattagaaaaacgaattagaggggtgattttggatcgaaaattgacc 10250592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 5025105 - 5025161
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacga-gttagaggggtgattttgggtcaaaaa 73  Q
    ||||||||||||| |||| |||||||  | |||||||||||||||||||||||||||    
T  5025105 atttcaataaaagggaaatagaaaaaataagttagaggggtgattttgggtcaaaaa 5025161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 23177632 - 23177699
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggt-caaaaattgaccataaat 85  Q
    ||||||||||| || |||||||||||| ||||||||| ||||||||||||  ||||||||||| |||||    
T  23177632 atttcaataaagga-aaagagaaaaactagttagaggagtgattttgggtaaaaaaattgaccttaaat 23177699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 38649438 - 38649486
Alignment:
Q  48 ttagaggggtgattttgggtcaaaaattgaccataaattacctcttttt 96  Q
    |||||||||||||||||||||||||||||||  ||||| ||| ||||||    
T  38649438 ttagaggggtgattttgggtcaaaaattgactctaaatcaccccttttt 38649486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 47156437 - 47156393
Alignment:
Q  41 aaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||||    
T  47156437 aaacgagttagagggatgattttggatcaaaaattgaccttaaat 47156393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 36350261 - 36350222
Alignment:
Q  34 aagagaaaaacgagttagaggggtgattttgggtcaaaaa 73  Q
    ||||||||||| |||||||||||||||||||||| |||||    
T  36350261 aagagaaaaacaagttagaggggtgattttgggttaaaaa 36350222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 41748572 - 41748639
Alignment:
Q  39 aaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaa 106  Q
    |||||| | ||||||| |||||||||| ||||||||||||| ||||| || ||| ||| |||||||||    
T  41748572 aaaaacaatttagaggagtgattttggatcaaaaattgaccgtaaatcacatctctttagtgaatgaa 41748639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 14734120 - 14734166
Alignment:
Q  38 gaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaa 84  Q
    ||||||||  ||||||||||||||| |||||||||||||||| ||||    
T  14734120 gaaaaacgttttagaggggtgatttggggtcaaaaattgaccctaaa 14734166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 35661588 - 35661535
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaa 71  Q
    ||||||||||||| ||||  ||||||||||||||||  ||||||| ||||||||    
T  35661588 atttcaataaaagggaaaaggaaaaacgagttagagtagtgatttagggtcaaa 35661535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 39090180 - 39090127
Alignment:
Q  18 atttcaataaaagagaaagagaaaaa-cgagttagaggggtgattttgggtcaa 70  Q
    ||||||||||||| |||| ||||||| |||||||||| ||||||||||| ||||    
T  39090180 atttcaataaaagggaaatagaaaaaacgagttagagaggtgattttggatcaa 39090127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 35135233 - 35135293
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgac 78  Q
    ||||||||||||  |||||| ||||||||| |||| | | |||||| ||||||||||||||    
T  35135233 atttcaataaaaaggaaagataaaaacgagctagaagagcgattttaggtcaaaaattgac 35135293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 46918464 - 46918406
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgac 78  Q
    ||||||||||| | ||||||||||| ||||||| ||||| |||| ||||||||||||||||    
T  46918464 atttcaataaagg-gaaagagaaaa-cgagttaaaggggcgattatgggtcaaaaattgac 46918406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 20201108 - 20201206
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || ||||||| ||||| |||||||||    
T  20201108 atttcaataaaagtgaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaa 20201206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 20203290 - 20203388
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || ||||||| ||||| |||||||||    
T  20203290 atttcaataaaagtgaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaa 20203388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 50519854 - 50519756
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||  | ||||||| ||||| |||||||||    
T  50519854 atttcaataaaagggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccatctttggtggatgaaggagaagaaa 50519756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 21803593 - 21803464
Alignment:
Q  19 tttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| ||  || ||||||  ||||| ||||||  |||    
T  21803593 tttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgacactgaatcactcctctttggtagatgaaggagaag--aaa 21803496  T
Q  119 ctagagttttgacgacggttgacaagagagaa 150  Q
    |||| ||||||  ||||| | |||||||||||    
T  21803495 ctagggttttggtgacggctcacaagagagaa 21803464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 1165446 - 1165544
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||| ||||| ||| || |||| || ||||| |||||||||    
T  1165446 atttcaataaaagggaaaaagaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggagaagaaa 1165544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 35501809 - 35501906
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||| || ||||||| ||||| |||||||||    
T  35501809 atttcagtaaaagggaaagagaaaaacgagttagaggggtgattttgggtcaaaaattaaccctaaatcacc-ctctttggtggatgaaggagaagaaa 35501906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 40462045 - 40462143
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||  ||||| ||| || ||||||| ||||| |||||||||    
T  40462045 atttcaataaaagggaaagagaaaaacaagttagaggggtgattttgggtcaaaatttgactctaaatcaccactctttggtggatgaaagagaagaaa 40462143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 22286799 - 22286897
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||||||||||||  ||| ||||||||||||||||||||| ||||| ||||||||||||||| ||||| ||| || ||||||| ||||| |||||||||    
T  22286799 atttcaataaaaggaaaatagaaaaacgagttagaggggtaattttaggtcaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaa 22286897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 2598147 - 2598059
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaa 106  Q
    |||||||||||||  ||||| |||||||||||||||| ||||||||||||||||||| |||  ||||| |||||||||||||| |||||    
T  2598147 atttcaataaaagcaaaagataaaaacgagttagaggagtgattttgggtcaaaaatcgactttaaatcacctctttttggtggatgaa 2598059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 41882458 - 41882556
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||| ||| |||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||  || |||| || ||||| |||||||||    
T  41882458 atttcaatacaagggaaatagaaaaacgagttagaggggtaattttgggtcaaaaattgaccctaaatcactcctctttgatggatgaaggagaagaaa 41882556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 1220265 - 1220395
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||  ||||||||||| | ||||| ||| || |||| |   |||| ||||||  ||    
T  1220265 atttcaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggtgaaggagaag--aa 1220362  T
Q  118 actagagttttgacgacggttgacaagagagaa 150  Q
    | |||||||||||||| |||| |||||| ||||    
T  1220363 attagagttttgacgatggttcacaagaaagaa 1220395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 25374120 - 25374227
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||| ||||||||||| ||| ||||| ||| ||| || ||||||||| || |||  ||    
T  25374120 atttcaagaaaaggaaaagagaaaaacgagttagaggggtgattttaggtcaaaaattaaccctaaatcacc-cttctttgtgaatgaaggaaaag--aa 25374216  T
Q  118 actagagtttt 128  Q
    |||||||||||    
T  25374217 actagagtttt 25374227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 43029747 - 43029649
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||| ||| | ||||| ||| || |||| || ||||| |||||||||    
T  43029747 atttcaataaaagggaaaaggaaaaacaagttagaggggtgattttgggtcaaaaaatgatcctaaatcacccctctttgatggatgaaggagaagaaa 43029649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 22844116 - 22843990
Alignment:
Q  18 atttcaataaaagagaaagagaaa-aacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||||||||||||| ||  | ||| |||||||||||||||||||||||||||||||||||||| ||||| | | || |||| |||||||| ||||  | |    
T  22844116 atttcaataaaagataattaaaaagaacgagttagaggggtgattttgggtcaaaaattgaccttaaatcagccctctttgatgaatgaaggaga--ata 22844019  T
Q  117 aactagagttttgacgacggttgacaaga 145  Q
    |||||| ||||||  ||||||| ||||||    
T  22844018 aactagggttttggtgacggttcacaaga 22843990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 43839568 - 43839696
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    ||||||||||||| ||||||||||| ||||||||| |||||| ||| ||||||||||||||| ||||| |||  | ||| ||||||||| ||||||  ||    
T  43839568 atttcaataaaagggaaagagaaaagcgagttaga-gggtgacttt-ggtcaaaaattgaccctaaatcacccatctttagtgaatgaaggagaag--aa 43839663  T
Q  118 actagagttttgacgacggttgacaagagagaa 150  Q
    ||||| |||||| |||||  |||||||| ||||    
T  43839664 actagggttttggcgacgactgacaagaaagaa 43839696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 14741375 - 14741431
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaat 74  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||    
T  14741375 atttcaataaaagggaaagagaaaaacgagttagagaggtgattttgggttaaaaat 14741431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 45664286 - 45664234
Alignment:
Q  25 taaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattga 77  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  45664286 taaaagagaaatagaaaaacgagttagaggggtgattttgggtcaaaatttga 45664234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 20251716 - 20251621
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggt-caaaaattgaccataaattacctctttttggtgaatgaatgagaa 112  Q
    |||||||| |||| ||||||||||||||||||||| ||||||||||||||  |||||| |||| ||||| ||| || ||||||| ||||| |||||    
T  20251716 atttcaatcaaagggaaagagaaaaacgagttagaagggtgattttgggtaaaaaaatcgaccctaaatcacccctctttggtggatgaaggagaa 20251621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 43242875 - 43242776
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    |||||| |||||| || |||||||||||||||| | ||||||||||| |||||||| ||||| ||||| |||  | |||| |||||||| ||||||||||    
T  43242875 atttcagtaaaagggacagagaaaaacgagttaaatgggtgattttgtgtcaaaaactgaccctaaatcacccttatttgatgaatgaaggagaagaaaa 43242776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 7656541 - 7656600
Alignment:
Q  32 gaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctt 93  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||    
T  7656541 gaaagagaaaaacgagttagaggg-tgattt-gggtcaaaaattgaccctaaattacctctt 7656600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 37051683 - 37051590
Alignment:
Q  23 aataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||| ||| ||| ||||||||||| ||||||||||||||  |||||||||||||||| ||||| | | || ||||||| ||||| |||||||||    
T  37051683 aatagaagggaaggagaaaaacgatttagaggggtgattcagggtcaaaaattgaccctaaatcatccctctttggtggatgaaagagaagaaa 37051590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 53426854 - 53426801
Alignment:
Q  32 gaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||| |||||    
T  53426854 gaaagagaaaaacgagttagaggggtgattttgcgtaaaaaattgaccctaaat 53426801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 34767043 - 34766992
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaa 70  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  34767043 atttcaataaaagggaaagagaaaaacgagttaga-gggtgattttgggtcaa 34766992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 913397 - 913456
Alignment:
Q  47 gttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaa 106  Q
    |||||||||||||||||||||||||||||||| || ||||||| || ||||||| |||||    
T  913397 gttagaggggtgattttgggtcaaaaattgactatgaattacccctctttggtggatgaa 913456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 29182658 - 29182705
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgg 65  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  29182658 atttcaataaaagggaaagagaaaaacgagttagagggatgattttgg 29182705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 42106176 - 42106087
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgag-ttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaa 106  Q
    ||||||||||||| |||| |||||||  || ||||| |||||||||| ||||||||||||||| ||||| ||| || ||||||| |||||    
T  42106176 atttcaataaaagggaaatagaaaaaacaggttagatgggtgattttaggtcaaaaattgaccctaaatcacccctctttggtggatgaa 42106087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 50460256 - 50460158
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    |||||||||||||||||||||||||||||| |  | ||||||||||  |||||||||||||| ||||| | | || |||| || |||||  |||||||||    
T  50460256 atttcaataaaagagaaagagaaaaacgaggt--atgggtgattttatgtcaaaaattgaccttaaatcatccctctttgatggatgaagaagaagaaaa 50460159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 3088712 - 3088763
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtca 69  Q
    |||||||||||||  ||| |||||||||| ||||||||||||||||||||||    
T  3088712 atttcaataaaaggaaaatagaaaaacgaattagaggggtgattttgggtca 3088763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 33076376 - 33076309
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    |||||||||||||  |||||| |||| ||||||||||||||||||||| |||||| || ||| |||||    
T  33076376 atttcaataaaaggaaaagaggaaaatgagttagaggggtgattttggatcaaaagttaaccctaaat 33076309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 36540722 - 36540812
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatga 109  Q
    ||||||||||||| |||| |||||| ||||||||| || ||| ||||||||||||| ||||| | ||||| | || ||||||| ||||||||    
T  36540722 atttcaataaaagggaaatagaaaa-cgagttagaaggttgactttgggtcaaaaactgaccctcaattaaccctctttggtggatgaatga 36540812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 40797097 - 40797015
Alignment:
Q  18 atttcaataaaagagaaagagaaaaa-cgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtg 100  Q
    ||||||||||||| |||| ||||||| | |||||||||||||||||||| || |||||| ||| ||||| ||| ||||||||||    
T  40797097 atttcaataaaagggaaatagaaaaaacaagttagaggggtgattttggctc-aaaattaaccctaaatcacccctttttggtg 40797015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 1806528 - 1806598
Alignment:
Q  36 gagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaa 106  Q
    ||||||||||| ||||||||||||||| || ||||||||||||| ||||  ||| || ||||||| |||||    
T  1806528 gagaaaaacgatttagaggggtgatttgggatcaaaaattgaccctaaaccacccctctttggtggatgaa 1806598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 33070218 - 33070152
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaa 84  Q
    |||| |||||||  ||| ||||||||||| ||||||||||||||| |||| ||||||||||| ||||    
T  33070218 atttaaataaaaaggaatgagaaaaacgatttagaggggtgatttggggttaaaaattgaccctaaa 33070152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 4019651 - 4019599
Alignment:
Q  32 gaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    |||||||||||||||||||||| |||||||||| ||| |||||||||| |||||    
T  4019651 gaaagagaaaaacgagttagagaggtgattttgagtc-aaaattgaccctaaat 4019599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 11846676 - 11846562
Alignment:
Q  21 tcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaaact 120  Q
    |||||||||  ||||||||||||| ||||||| |||||||||| | ||||||||| ||| || || ||  || || |||| ||||| ||||  |||||||    
T  11846676 tcaataaaatggaaagagaaaaacaagttagacgggtgattttcgctcaaaaattaaccctatatcactcctcttaggtggatgaaggaga--aaaaact 11846579  T
Q  121 agagttttgacgacggt 137  Q
    || ||||||| ||||||    
T  11846578 agggttttgatgacggt 11846562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 29776747 - 29776784
Alignment:
Q  27 aaagagaaagagaaaaacgagttagaggggtgattttg 64  Q
    |||| |||||||||||||||||||||||||||||||||    
T  29776747 aaagggaaagagaaaaacgagttagaggggtgattttg 29776784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 33977972 - 33978068
Alignment:
Q  18 atttcaataaaagagaaagagaaaaa-cgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||| ||||||| ||||||| ||||   ||||||||||||||||||||| ||||| |||  ||||| ||| ||||| ||| |||||    
T  33977972 atttcaataaaagggaaatagaaaaaacgagttaaaggg---attttgggtcaaaaattgaccttaaatcaccatttttttgtggatgaaggaggagaaa 33978068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 26412396 - 26412342
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaa 72  Q
    ||||||||||||| || |||||||||||| ||||||  ||||||||| |||||||    
T  26412396 atttcaataaaagggagagagaaaaacgacttagagatgtgattttgagtcaaaa 26412342  T

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Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 21085995 - 21086100
Alignment:
Q  23 aataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaaactag 122  Q
    |||||||||||| | || |||||| |||||| |||||| |  |||||| ||||||||  |||||||| || ||| ||| || || ||||||  |||||||    
T  21085995 aataaaagagaaggtgataaacgatttagagaggtgatatgaggtcaagaattgacccaaaattacccctctttagtggataaaggagaag--aaactag 21086092  T
Q  123 agttttga 130  Q
    ||||||||    
T  21086093 agttttga 21086100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 47914644 - 47914687
Alignment:
Q  19 tttcaataaaagagaaagagaaaaacgagttagaggggtgatttt 63  Q
    |||||||||||  |||||| |||||||||||||||||||||||||    
T  47914644 tttcaataaaatggaaaga-aaaaacgagttagaggggtgatttt 47914687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 40125453 - 40125323
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||| ||||| ||| || ||||||| ||||| ||||||  ||    
T  40125453 atttcaataaaagagaaatagaaaaacaagttagaggggtgattttgggtcaaaaattaaccctaaatcacccctctttggtggatgaaggagaag--aa 40125356  T
Q  118 actagagttttgacgacggttgacaagagagaa 150  Q
    ||||  ||||||| ||||| | |||||||||||    
T  40125355 actaaggttttgatgacggctcacaagagagaa 40125323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 6089957 - 6089859
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||| ||||| ||| || |||| || ||||| |||||||||    
T  6089957 atttcaataaaagggaaatagaaaaacgaattagaggggtgattttgggtcaaaaattgaccttaaatcacccctctttgatggatgaaggagaagaaa 6089859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 25516558 - 25516460
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| ||||||| ||||| ||| || ||||||| ||||| |||||||||    
T  25516558 atttcaataaaagggaaatagaaaaatgagttagaggggtgattttgggtcaaatattgaccctaaatcacccctctttggtggatgaaggagaagaaa 25516460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 27191385 - 27191483
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||| ||||| | | || ||||||| ||||| |||||||||    
T  27191385 atttcaataaaagggaaatagaaaaacgagttagaggggtgatttagggtcaaaaattgaccctaaatcatccctctttggtggatgaaggagaagaaa 27191483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 27841199 - 27841297
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||| ||||| | | || ||||||| ||||| |||||||||    
T  27841199 atttcaataaaagggaaatagaaaaacgagttagaggggtgatttagggtcaaaaattgaccctaaatcatccctctttggtggatgaaggagaagaaa 27841297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 44167759 - 44167857
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||||||| ||||  ||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| || ||||||| ||||| |||||||||    
T  44167759 atttcaattaaaggaaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgaccatatatcacccctctttggtggatgaaggagaagaaa 44167857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 5930482 - 5930391
Alignment:
Q  23 aataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaaga 114  Q
    |||||||| |||| ||||||||||||||||||| ||||||||||||||||||| ||| ||||| |||||| ||||||| ||||| |||||||    
T  5930482 aataaaagggaaacagaaaaacgagttagagggatgattttgggtcaaaaattaaccctaaatcacctctctttggtggatgaaggagaaga 5930391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 7640406 - 7640473
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7640406 atttcaataaaagggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaat 7640473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 41176927 - 41176828
Alignment:
Q  18 atttcaataaaagagaaagagaaaaa-cgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||||||||| ||||| ||| || ||||||| ||||| |||||||||    
T  41176927 atttcaataaaagagaaatagaaaaaacgagttagatgggtggttttgggtcaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaa 41176828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 41842014 - 41841878
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtga-ttttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||| | | || | || || ||||| ||||  |||    
T  41842014 atttcaataaaagggaaagagaaaaacgagttaaaggggtgatttttgggtcaaaaattgaccataaatcaaccctctatgatggatgaaggaga--aaa 41841917  T
Q  117 aactagagttttgacgacggttgacaagagagaatgaaa 155  Q
    |||||||||||||  || |||| |||| | |||||||||    
T  41841916 aactagagttttggtgatggttcacaaaaaagaatgaaa 41841878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 3390496 - 3390398
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||||||| ||||| ||| || |||| || ||||| |||||||||    
T  3390496 atttcaataaaagggaaaaggaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggagaagaaa 3390398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 25771509 - 25771411
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||||||| ||||| ||| || |||| || ||||| |||||||||    
T  25771509 atttcaataaaagggaaaaggaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggagaagaaa 25771411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 26491367 - 26491269
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||| ||||||| |||||| |||||||||||||||||||||||||| | ||||||||| || ||||||| ||||  |||||||||    
T  26491367 atttcaataaaagggaaatagaaaaatgagttaaaggggtgattttgggtcaaaaattgaacttaaattacccctctttggtggatgatggagaagaaa 26491269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 10589103 - 10589014
Alignment:
Q  18 atttcaataaaagagaaagagaaaaa-cgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaa 106  Q
    ||||||||||||| |||| ||||||| | |||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||    
T  10589103 atttcaataaaagggaaatagaaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctttttggtggatgaa 10589014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 29812665 - 29812753
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaa 106  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||| |||||||||||||| ||||| |||||| |||| || |||||    
T  29812665 atttcaataaaaggtaaagagaaaaatgagttagaggggtgattttgtgtcaaaaattgaccctaaatcacctctctttgatggatgaa 29812753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 42105802 - 42105890
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaa 106  Q
    ||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||| ||||  ||| || ||||||| |||||    
T  42105802 atttcaataaaagggaaatagaaaaacgagttagagtggtgattttgggtcaaaaattgaccctaaagcacccctctttggtggatgaa 42105890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 3465023 - 3464925
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||||||||||||  ||| ||||||||||||||| | ||||||||||| ||||||||||||| ||||| ||| || ||||||| ||||| |||||||||    
T  3465023 atttcaataaaaggaaaatagaaaaacgagttagtgtggtgattttggatcaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaa 3464925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 25623095 - 25623183
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaa 106  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||  |||||| ||| || |||| || |||||    
T  25623095 atttcaataaaagggaaagagaaaaacgagttatatgggtgattttgggtcaaaaattgataataaatcacccctctttgatgtatgaa 25623183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 27024189 - 27024298
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    ||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||| ||||| ||||| |||  | |||| || ||||| ||||||  ||    
T  27024189 atttcaataaaagggaaaaggaaaaacaagttagaggggtgattttgggtcaaaaaatgaccctaaatcacccatctttgatggatgaaggagaag--aa 27024286  T
Q  118 actagagttttg 129  Q
    ||||||||||||    
T  27024287 actagagttttg 27024298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 3603049 - 3602951
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||| |||||  |||||||||||| ||||||||||||||||||| ||||||| |||||||||||| |||  | |||| || ||||| |||||||||    
T  3603049 atttcaagaaaaggaaaagagaaaaacaagttagaggggtgattttgagtcaaaagttgaccataaatcacccatctttgatggatgaaggagaagaaa 3602951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 37883717 - 37883619
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||| |||||||  |||| |||||||||| |||||||||||||||||| | ||||||||||| ||||| ||| || ||||||| ||||| |||||||||    
T  37883717 attttaataaaaaggaaatagaaaaacgaattagaggggtgattttggattaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaa 37883619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 43566939 - 43566843
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||  |||| ||||||||||||||||||| ||||||||||||||||||||||| | ||| ||| || ||||||| ||||| |||||||||    
T  43566939 atttcaataaaaaggaaatagaaaaacgagttagaggg-tgattttgggtcaaaaattgaccct-aatcacccctctttggtggatgaaggagaagaaa 43566843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 36507995 - 36507897
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||||||||||||  ||| ||||||| |||| |||| ||||||||||||||||||||||||| ||| | |||  | ||||||| ||||| |||||||||    
T  36507995 atttcaataaaaggaaaatagaaaaatgagtcagagaggtgattttgggtcaaaaattgaccctaagtcaccattctttggtggatgaaggagaagaaa 36507897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 16880024 - 16880076
Alignment:
Q  33 aaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  16880024 aaagggaaaaacgagtgagaggggtgattttgggtcaaaaattgaccaaaaat 16880076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 44441450 - 44441390
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgac 78  Q
    ||||| |||||||||||||| ||||||||||||||   |||||||||||||||||||||||    
T  44441450 atttcgataaaagagaaagataaaaacgagttagataagtgattttgggtcaaaaattgac 44441390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 5071420 - 5071486
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaa 84  Q
    |||| ||||||||||||  |||||||||| ||||| |||||||||  ||||||||||||||||||||    
T  5071420 atttaaataaaagagaagaagaaaaacgatttagaagggtgatttaaggtcaaaaattgaccataaa 5071486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 29734254 - 29734194
Alignment:
Q  18 atttcaataaaagagaaagagaaaaa-cgagttagaggggtgattttgggtcaaaaattga 77  Q
    ||||||||||||| |||| ||||||| ||||||||||| ||||||||||||||||| ||||    
T  29734254 atttcaataaaagggaaatagaaaaaacgagttagaggagtgattttgggtcaaaatttga 29734194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 34480020 - 34479911
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    ||||||||||||| |||||||||||  | |||| | |||||||||||||| ||||||||||| || || | |  | |||| || ||||||||||||  ||    
T  34480020 atttcaataaaagggaaagagaaaattgtgttataagggtgattttgggtaaaaaattgaccctatatcatccatctttgatggatgaatgagaag--aa 34479923  T
Q  118 actagagttttg 129  Q
    ||||||||||||    
T  34479922 actagagttttg 34479911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 13268637 - 13268520
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagagggg-tgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||| ||||| | ||||||||| ||||||||||||| ||||||||| |||||||| |||||||||| ||| || |||  || |||||  || | |||    
T  13268637 atttcaacaaaagggcaagagaaaa-cgagttagagggggtgattttggttcaaaaat-gaccataaatcacccctctttaatggatgaagcaggaaaaa 13268540  T
Q  117 aactagagttttgacgacgg 136  Q
    ||||||| ||||||||||||    
T  13268539 aactagaattttgacgacgg 13268520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 15674045 - 15674091
Alignment:
Q  39 aaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||||    
T  15674045 aaaaacaagttagaggagtgattttgggtcaaaaattgaccctaaat 15674091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 19581052 - 19581114
Alignment:
Q  18 atttcaataaaagagaaagagaaaa-acgagttagaggggtgattttgggtcaaaaattgacc 79  Q
    ||||||||||||| |||| | |||| |||||||||||||||||||||| || |||||||||||    
T  19581052 atttcaataaaagggaaataaaaaaaacgagttagaggggtgattttgtgttaaaaattgacc 19581114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 19953634 - 19953588
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttg 64  Q
    ||||||||||||| |||||||||||||||||||||  ||||||||||    
T  19953634 atttcaataaaagggaaagagaaaaacgagttagataggtgattttg 19953588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 9715594 - 9715689
Alignment:
Q  18 atttcaataaaagagaaagagaaaa-acgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaa 112  Q
    |||||||||||||  ||| |||||| ||||||| ||| | ||||||||| ||||||||||||| ||||| |||  |||||| || ||||| |||||    
T  9715594 atttcaataaaaggaaaaaagaaaaaacgagttggagagatgattttggatcaaaaattgaccctaaatcacccatttttgatggatgaaagagaa 9715689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 2251395 - 2251456
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgacc 79  Q
    |||| |||| ||| ||| ||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  2251395 atttaaatagaagggaaggagaaaaacgatttagaggagtgatttggggtcaaaatttgacc 2251456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 3398034 - 3398095
Alignment:
Q  23 aataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaa 84  Q
    |||||||| ||| ||||||||| |  |||||||||||| | |||||||||||||||| ||||    
T  3398034 aataaaagggaaggagaaaaacaatgtagaggggtgatctggggtcaaaaattgaccttaaa 3398095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 25237376 - 25237506
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    ||||||| ||||| ||||| ||||||| |||| ||| ||||||||||| |||||| |||||  ||||| ||| || |||  |  ||||| ||||  | ||    
T  25237376 atttcaacaaaagggaaagggaaaaacaagttcgagaggtgattttggatcaaaagttgactctaaatcacccctctttaatagatgaaggaga--ataa 25237473  T
Q  118 actagagttttgacgacggttgacaagagagaa 150  Q
    ||||||||||| |||| || | |||||||||||    
T  25237474 actagagttttaacgatggctcacaagagagaa 25237506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 844 - 728
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    ||||||||||||| ||||||| |||||||||||||| | ||||||| ||||||||||||||| ||||| || ||||||||||| ||||| ||||||  ||    
T  844 atttcaataaaagggaaagaggaaaacgagttagagtgatgatttttggtcaaaaattgaccttaaatcacatctttttggtggatgaaggagaag--aa 747  T
Q  118 actagagttttgacgacgg 136  Q
    ||||||||||||| |||||    
T  746 actagagttttgatgacgg 728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 20845072 - 20845001
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacc 89  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  20845072 atttcaataaaagggaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccttgaattacc 20845001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 16913392 - 16913294
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||||||| |||| ||||| ||||||||||||||||||||||||| |||||||||||||||| ||||| ||| || ||||||| ||||| |||||||||    
T  16913392 atttcaatgaaagtgaaagtgaaaaacgagttagaggggtgatttcgggtcaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaa 16913294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 19759852 - 19759785
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19759852 atttcaataaaagggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaat 19759785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 548915 - 548976
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgacc 79  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  548915 atttcaataaaagggaaaaagaaaaacgagttagaggggtgattttgggtcaaaaattgacc 548976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 4663870 - 4663968
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||| ||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||   ||| ||| || ||||||| ||||| |||||||||    
T  4663870 attttaataaaagagaaacataaaaacgtgttagaggggtgattttgggtcaaaaattgacccacaatcacccctctttggtggatgaaggagaagaaa 4663968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 15128199 - 15128260
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgacc 79  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15128199 atttcaatacaagggaaagagaaaaacgagttagaggggtgattttgggacaaaaattgacc 15128260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 32457710 - 32457650
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgac 78  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  32457710 atttcaataaaaatgaaagagaaaaacgagttagatgggtgattttgggtcaaaaattgac 32457650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 12576528 - 12576626
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||||||| |||| |||| |||||||| ||||||||||||||||| |||||||||||||||| ||||| ||| || ||| ||| ||||| || ||||||    
T  12576528 atttcaattaaagggaaatagaaaaacaagttagaggggtgatttagggtcaaaaattgaccctaaatcacccctctttcgtggatgaaggaaaagaaa 12576626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 31748022 - 31747926
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||||||| |||  ||||||||||||||||||||||||||  |||  ||||||||||||||| ||||| | |||| ||||| | |||||||||||||||    
T  31748022 atttcaattaaaaggaaagagaaaaacgagttagaggggtctttt--ggtcaaaaattgaccctaaatcatctctctttggcggatgaatgagaagaaa 31747926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 150
Target Start/End: Complemental strand, 32574503 - 32574387
Alignment:
Q  32 gaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaaactagagttttgac 131  Q
    ||||||||||| |||||||||||| | ||||||||||||||||||||  ||||  |||| | ||||||| ||||| ||||||||||  ||| ||||||      
T  32574503 gaaagagaaaagcgagttagagggttaattttgggtcaaaaattgactctaaaacacctatatttggtggatgaaggagaagaaaa--tagggttttggt 32574406  T
Q  132 gacggttgacaagagagaa 150  Q
    ||||| | |||||||||||    
T  32574405 gacggctcacaagagagaa 32574387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 7049310 - 7049217
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaa 112  Q
    ||||||||||||| |||||||||||| ||| | |||||||||||||| ||||||| |||||| ||||| ||| || ||||||| ||||| |||||    
T  7049310 atttcaataaaagggaaagagaaaaatgagct-gaggggtgattttgagtcaaaagttgaccctaaatcacccctctttggtggatgaaggagaa 7049217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 8644309 - 8644221
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaa 106  Q
    ||||||||||||| |||||||||||| || || ||| ||||||||| ||||||||||||||| ||||| |||  |||||| || |||||    
T  8644309 atttcaataaaagggaaagagaaaaatgaatttgagtggtgatttttggtcaaaaattgaccctaaatcacccatttttgatggatgaa 8644221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 32804359 - 32804291
Alignment:
Q  18 atttcaataaaagagaaagagaaaaac-gagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||||| | ||||||||||  |||||||| |||||||||||||||||||||||||| |||||    
T  32804359 atttcaataaaagggtaagagaaaaaatgagttagatgggtgattttgggtcaaaaattgaccctaaat 32804291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 891652 - 891554
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||   ||| |||||||||||||| |||||| |||||||||||||||| |||| | ||| |||||| |||  || ||||| |||||||||    
T  891652 atttcaataaaatgaaaacagaaaaacgagttataggggtaattttgggtcaaaaatcgacccttaatcacctctctttaatggatgaaggagaagaaa 891554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 1944160 - 1944114
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttg 64  Q
    |||||||||| || |||||||||||||||||||||||||||||||||    
T  1944160 atttcaataagagggaaagagaaaaacgagttagaggggtgattttg 1944114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 13234158 - 13234224
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||||| |||| |||||||||| |||||  ||||||||| ||||||||||||||| |||||    
T  13234158 atttcaataaaagggaaaaagaaaaacgaattaga-aggtgattttaggtcaaaaattgaccctaaat 13234224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 33194669 - 33194602
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    |||||||||||   ||||||||||||||| ||||||  |||||||||| ||||||||||||| |||||    
T  33194669 atttcaataaagaggaaagagaaaaacgaattagagatgtgattttggatcaaaaattgaccctaaat 33194602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 10744622 - 10744545
Alignment:
Q  39 aaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||||| ||||||||| ||||||||||||||||| |||||| ||||| |||  | ||||||| ||||| | |||||||    
T  10744622 aaaaacaagttagaggagtgattttgggtcaaaagttgaccctaaatcacccatctttggtggatgaaggtgaagaaa 10744545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 22530344 - 22530287
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaatt 75  Q
    |||||||  |||| |||||||||||| |||||| | ||||||||||||||||||||||    
T  22530344 atttcaaataaagggaaagagaaaaaggagttaaatgggtgattttgggtcaaaaatt 22530287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 9700 - 9796
Alignment:
Q  20 ttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||| ||||| | | || ||||||| ||||| |||||||||    
T  9700 ttcaataaaagggaaatagaaaaacgagttagaggagtgattttgggtcaaaaattgaccctaaatcatccctctttggtggatgaaggagaagaaa 9796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 34893981 - 34894064
Alignment:
Q  33 aaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || |||| || ||||| |||||||||    
T  34893981 aaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccgtaaatcacccctctttgatggatgaaggagaagaaa 34894064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 28618668 - 28618570
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| || |||||   ||||| |||||||||    
T  28618668 atttcaataaaagggaaatagaaaaacgagttagaggggtgattttgggttaaaaattgaccttaaatcacccctctttggctgatgaaggagaagaaa 28618570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 6887228 - 6887337
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    ||||||||||||| ||||  ||||||| |||||||||||||||||||||| ||||||||||| ||||| ||| || |||| || ||||| ||||||  ||    
T  6887228 atttcaataaaagggaaaaggaaaaacaagttagaggggtgattttgggttaaaaattgaccctaaatcacccctctttgatggatgaaggagaag--aa 6887325  T
Q  118 actagagttttg 129  Q
    ||||||||||||    
T  6887326 actagagttttg 6887337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 15710606 - 15710490
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggt--caaaaattgaccataaattacctctttttggtgaatgaatgagaagaa 115  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |   ||||||||||||||||| |||  | |||| || ||||| || |||      
T  15710606 atttcaataaaagggaaagagaaaaacgagttagaggggtgattttggataaaaaaaattgaccataaatcacccatctttgatggatgaaggaaaag-- 15710509  T
Q  116 aaactagagttttgacgac 134  Q
    |||||||||||||||||||    
T  15710508 aaactagagttttgacgac 15710490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 4070618 - 4070512
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    ||||||||||||  |||| |||||||||||| |||||||||||||||||||||||| ||||| ||||| ||| |||||||||| ||||| ||||||  ||    
T  4070618 atttcaataaaaaggaaatagaaaaacgagtcagaggggtgattttgggtcaaaaa-tgaccctaaatcacccctttttggtggatgaa-gagaag--aa 4070523  T
Q  118 actagagtttt 128  Q
    |||||||||||    
T  4070522 actagagtttt 4070512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 6647963 - 6648030
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  6647963 atttcaataaaagggaaagcgaaaaacgagttagaggagtgattttgggtcaaaatttgaccataaat 6648030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 2415464 - 2415334
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    ||||||||||||| |||| |||||||| ||||||| |||||||||||||||||||||||||| ||||| |||| | |||| || |||||   |||   ||    
T  2415464 atttcaataaaagggaaaaagaaaaacaagttagaagggtgattttgggtcaaaaattgaccctaaatcacctatctttgatggatgaa--ggaaattaa 2415367  T
Q  118 actagagttttgacgacggttgacaagagagaa 150  Q
    ||||| ||||||| ||||| | |||||||||||    
T  2415366 actagggttttgatgacggctcacaagagagaa 2415334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 19646091 - 19646188
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaa 115  Q
    |||||| |||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| ||||  ||| || ||||||  ||||| ||||||||    
T  19646091 atttcattaaaagggaaagagaaaaatgagttagaggggtgattttgggtcaaacattgaccttaaaccacccctctttggtcgatgaaggagaagaa 19646188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 41358103 - 41358030
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttaga-ggggtgattttgggtcaaaaattgaccataaattacct 90  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||    
T  41358103 atttcaataaaaggaaaagagaaaaacgagttagagggggtgattttgggtcaaaaattgaccctaaatcacct 41358030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 4726978 - 4727049
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacc 89  Q
    ||||||||||||| |||| |||||||||||||| | || ||||||||||||||||||||||| |||||||||    
T  4726978 atttcaataaaagggaaatagaaaaacgagttatatggatgattttgggtcaaaaattgaccctaaattacc 4727049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 31645893 - 31645795
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| ||||  ||||||| |||||||||||||||||||| ||||||||||||| ||||| ||| || |||  || ||||| |||||||||    
T  31645893 atttcaataaaagggaaaaggaaaaacaagttagaggggtgattttggatcaaaaattgaccctaaatcacccctctttaatggatgaaggagaagaaa 31645795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 37425035 - 37424958
Alignment:
Q  40 aaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| ||| || ||||||| ||||| || |||||||    
T  37425035 aaaacgagttagaggcgtgattttgggtcagaaattgaccataaatcacccctctttggtggatgaaggaaaagaaaa 37424958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 41988248 - 41988118
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    ||||||| ||||| ||||||||||||||||||||||||| |||||||  ||||||||||| | ||||| ||| || |||| |   |||| ||||||  ||    
T  41988248 atttcaacaaaagggaaagagaaaaacgagttagaggggcgattttgaatcaaaaattgatcctaaatcacccctctttgataggtgaaggagaag--aa 41988151  T
Q  118 actagagttttgacgacggttgacaagagagaa 150  Q
    |||||||||||| ||| |||| |||||| ||||    
T  41988150 actagagttttggcgatggttcacaagaaagaa 41988118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 9034998 - 9035065
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    |||| |||||||  |||||||||||||||||||||||| |||||||| |||||||||||| |||||||    
T  9034998 attttaataaaatggaaagagaaaaacgagttagagggatgattttgagtcaaaaattgatcataaat 9035065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 33486619 - 33486718
Alignment:
Q  18 atttcaataaaagagaaagagaaaaa-cgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||| ||||||| | ||||||| |||||||||||||||||||||||||| ||||| ||| || ||| ||| ||||| | |||||||    
T  33486619 atttcaataaaagggaaatagaaaaaacaagttagatgggtgattttgggtcaaaaattgaccctaaatcacccctctttagtggatgaaggtgaagaaa 33486718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 41554551 - 41554452
Alignment:
Q  18 atttcaataaaagagaaagagaaaaa-cgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||| ||||||| | |||||||||||||||||||| ||||||||||| | ||||| ||| || |||| |||||||| | |||||||    
T  41554551 atttcaataaaagggaaatagaaaaaacaagttagaggggtgattttggatcaaaaattgatcctaaatcacccctctttgatgaatgaaggtgaagaaa 41554452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 41063446 - 41063507
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgacc 79  Q
    ||||||||||||  ||||||||||||||||||||| | ||||||||| ||||||||||||||    
T  41063446 atttcaataaaatggaaagagaaaaacgagttagatgagtgattttgagtcaaaaattgacc 41063507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 29154318 - 29154264
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaa 73  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||    
T  29154318 atttcaataaaagagaaaga-aaaaacaagttagaggggtgattttgagtcaaaaa 29154264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 29310399 - 29310466
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||||| ||||   |||||| |||||||||||||||||||| ||||||||||||| |||||    
T  29310399 atttcaataaaagggaaaagaaaaaacaagttagaggggtgattttggatcaaaaattgaccctaaat 29310466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 18472796 - 18472842
Alignment:
Q  39 aaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||    
T  18472796 aaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaat 18472842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 5378366 - 5378317
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggt 67  Q
    ||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  5378366 atttcaataaaagggaaatagaaaaacgagttagaggggtgatttagggt 5378317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 34950511 - 34950446
Alignment:
Q  48 ttagagggg-tgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaa 112  Q
    ||||||||| |||||||||||||| |||||||||||||  |||||| ||||||| |||||||||||    
T  34950511 ttagaggggatgattttgggtcaagaattgaccataaaccacctctctttggtggatgaatgagaa 34950446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 8812231 - 8812290
Alignment:
Q  47 gttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaa 106  Q
    ||||||||||||||||||||| ||||||||||| || || ||| |||||||||| |||||    
T  8812231 gttagaggggtgattttgggttaaaaattgaccctatatcacccctttttggtggatgaa 8812290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 34866491 - 34866456
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagag 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  34866491 atttcaataaaagagaaagagaaaaacgagttagag 34866456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 13079202 - 13079143
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgacc 79  Q
    ||||||||||||| |||||||||||||||| |   |||||||||||||||||||| ||||||    
T  13079202 atttcaataaaagggaaagagaaaaacgaggt--tggggtgattttgggtcaaaatttgacc 13079143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 11052942 - 11052875
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    |||| ||||||||  ||||||||||| || ||||| | || |||||||||||||| ||||||||||||    
T  11052942 atttaaataaaaggaaaagagaaaaatgatttagaagagtaattttgggtcaaaagttgaccataaat 11052875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 13007749 - 13007690
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgacc 79  Q
    ||||||||||||| ||||||||||||| || | |  ||||||||||||||||||| ||||||    
T  13007749 atttcaataaaagggaaagagaaaaacaaggttg--gggtgattttgggtcaaaatttgacc 13007690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 13080210 - 13080154
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaatt 75  Q
    |||||||||||||  |||||||||||| || | | |||||||||||||||||||||||    
T  13080210 atttcaataaaaggaaaagagaaaaacaaggttg-ggggtgattttgggtcaaaaatt 13080154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 28500781 - 28500736
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgatttt 63  Q
    ||||||||||||| |||||||||||| |||||| ||| ||||||||    
T  28500781 atttcaataaaagggaaagagaaaaaagagttaaaggagtgatttt 28500736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 34873925 - 34873880
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgatttt 63  Q
    ||||||||||||| ||||  ||||||||||||||| ||||||||||    
T  34873925 atttcaataaaagggaaactgaaaaacgagttagaagggtgatttt 34873880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 38646648 - 38646581
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    |||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  38646648 atttcaataaaagaaaaagagaaaaacgagttacatgggtgattttgggtcaaaaattgaccataaat 38646581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 44562799 - 44562866
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44562799 atttcaataaaagggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaat 44562866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 6212936 - 6213034
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||||||||| ||| || |||| || | ||| |||||||||    
T  6212936 atttcaataaaagggaaaaggaaaaacgagttagaggtgtgattttgggtcaaaaattgaccataaatcacccctctttgatggacgaaggagaagaaa 6213034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 14717293 - 14717422
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaa 117  Q
    ||||||||||||| |||| |||||||||||||||| |||||| |||  |||||||||||||| ||||| ||| || ||||||| ||||| ||||||  ||    
T  14717293 atttcaataaaagggaaaaagaaaaacgagttaga-gggtgaatttaagtcaaaaattgaccctaaatcacccctctttggtggatgaaggagaag--aa 14717389  T
Q  118 actagagttttgacgacggttgacaagagagaa 150  Q
    ||||||||||||  ||||| | |||||||||||    
T  14717390 actagagttttggtgacggctcacaagagagaa 14717422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 5832297 - 5832230
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  5832297 atttcaataaaagggaaatagaaaaacgagttagaggggtgatttagggtcaaaaattgaccctaaat 5832230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 10877409 - 10877327
Alignment:
Q  19 tttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggt-caaaaattgaccataaattacctctttttggtg 100  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||||||| ||| || |||||||    
T  10877409 tttcaataaaagggaaagagaaaaacgagttagaggtgtgattttgggtaaaaaaattgaccataaatcaccactctttggtg 10877327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 22344962 - 22345060
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||||| | ||||| ||| || |||| || ||||| |||||||||    
T  22344962 atttcaataaaagggaaaaggaaaaacaagttagaggggtgattttgggtcaaaaattgaacctaaatcacccctctttgatggatgaaggagaagaaa 22345060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 8893357 - 8893300
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaatt 75  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  8893357 atttcaataaaagggaaagagaaaaacgagttagaagggtgattttgggtcaaaaatt 8893300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 23320504 - 23320448
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaat 74  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  23320504 atttcaataaaagggaaatagaaaaacgagttagaggggtgattttgggtcaaaaat 23320448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 630835 - 630902
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||||| |||| |||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  630835 atttcaataaaagggaaatagaaaaacgagttagatgggtgatttagggtcaaaaattgaccctaaat 630902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 35077940 - 35078007
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||||  |||||||||||||||||||||| |||||||||||||||||| |||| |||||||    
T  35077940 atttcaataaaaatgaaagagaaaaacgagttagagaggtgattttgggtcaaaatttgatcataaat 35078007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 45659106 - 45659045
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgacc 79  Q
    |||||||||||||  |||||||||||||||||||||  ||||||||||||||||||||||||    
T  45659106 atttcaataaaaggtaaagagaaaaacgagttagagcagtgattttgggtcaaaaattgacc 45659045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 17579832 - 17579744
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaa 106  Q
    |||||||| |||| |||||||||||| ||||||||||| ||||||||| ||||||||||||| ||| | ||| || |||| ||||||||    
T  17579832 atttcaattaaagggaaagagaaaaatgagttagagggatgattttggttcaaaaattgaccctaagtcacccctctttgatgaatgaa 17579744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 4564582 - 4564535
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgg 65  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  4564582 atttcaataaaagagaaatagaaaaacgagttagaggggtgattttgg 4564535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 21326537 - 21326478
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattga 77  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| | |||||||||||    
T  21326537 atttcaataaaagggaaatagaaaaacgagttagaggggtgatttttgttcaaaaattga 21326478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 29067114 - 29067022
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||||||||||||||||||||      |  | |||||||||||||||||||||| |||||| |||| | ||||||||||||||||    
T  29067114 atttcaataaaagggaaagagaaaaacgagttaga------aactagggtcaaaaattgaccataaatcacctctatttgataaatgaatgagaagaaa 29067022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 13691808 - 13691874
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaa 84  Q
    |||| |||| ||| ||| ||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  13691808 atttaaatagaagtgaaggagaaaaacgatttagaggggtgattttgggtcaaaaattgaccctaaa 13691874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 40992397 - 40992351
Alignment:
Q  19 tttcaataaaagagaaagagaaaaacgagttagaggggtgattttgg 65  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  40992397 tttcaataaaagggaaagagaaaaacgagttagaggggtgattttgg 40992351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 15276500 - 15276553
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaa 71  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  15276500 atttcaataaaagggaaagagaaaaacgagtgagatgggtgattttgggtcaaa 15276553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 52839569 - 52839496
Alignment:
Q  34 aagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaat 107  Q
    |||| |||||||||||||| |||||||||||||||||||||||| ||||||| ||| || |||| || ||||||    
T  52839569 aagaaaaaaacgagttagaagggtgattttgggtcaaaaattgatcataaatcacccctctttgatggatgaat 52839496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 52752092 - 52752036
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaat 74  Q
    ||||||||||||| |||| ||||||||||||||||| ||||||||||| ||||||||    
T  52752092 atttcaataaaagggaaaaagaaaaacgagttagagaggtgattttggatcaaaaat 52752036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 52839466 - 52839373
Alignment:
Q  39 aaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaaactagagttttgacgac 134  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| ||| || |||  || ||||| ||||  | |||||||||||||| ||||    
T  52839466 aaaaacgagttagaagggtgattttgggtcaaaaattgaccctaaatcacccctctttaatggatgaaagaga--acaaactagagttttggcgac 52839373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 30853832 - 30853931
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagagggg-tgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||||||| |||| |||||||||||| || |||| |||| ||||||||||||||||||||||| | ||| ||  || ||||||| ||||| |||||||||    
T  30853832 atttcaatgaaagggaaagagaaaaatgacttagtgggggtgattttgggtcaaaaattgaccttgaatcacacctctttggtggatgaaggagaagaaa 30853931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 44514039 - 44514138
Alignment:
Q  18 atttcaataaaagagaaagagaaaaa-cgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    ||||||||||||| |||| ||||||| | ||||| || ||||||||||||||||||||||||| ||||| ||| || ||| ||| ||||| | |||||||    
T  44514039 atttcaataaaagggaaatagaaaaaacaagttaaagaggtgattttgggtcaaaaattgaccctaaatcacccctctttagtggatgaaggtgaagaaa 44514138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 48655116 - 48655198
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtg 100  Q
    ||||||||||||| |||||| ||||| |||||  ||  |||||||||||||||||||||||  ||||| ||| ||||||||||    
T  48655116 atttcaataaaagggaaagataaaaatgagttgcagatgtgattttgggtcaaaaattgactctaaatcacccctttttggtg 48655198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 34659680 - 34659735
Alignment:
Q  19 tttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaat 74  Q
    |||||||||||| |||||||||||||  ||| |||||||||||| |||||||||||    
T  34659680 tttcaataaaagggaaagagaaaaacaggttcgaggggtgatttcgggtcaaaaat 34659735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 49651899 - 49651840
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattga 77  Q
    ||||||||||||  |||| |||||||||||||||| | |||||||||| |||||||||||    
T  49651899 atttcaataaaaaggaaatagaaaaacgagttagatgtgtgattttggatcaaaaattga 49651840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 2875625 - 2875710
Alignment:
Q  27 aaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctc-tttttggtgaatgaatgagaa 112  Q
    |||| ||| ||||||||| | ||||||||||||||| ||||||| |||||||||||||  ||||| ||||||||| ||||| |||||    
T  2875625 aaagggaaggagaaaaacaatttagaggggtgatttggggtcaacaattgaccataaa-cacctcttttttggtggatgaaggagaa 2875710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 46589238 - 46589158
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtg 100  Q
    |||| ||||||||||||| | |||| |||||||||||| |||||||| |||||||||||| ||||||| ||| || |||||||    
T  46589238 attttaataaaagagaaatataaaa-cgagttagaggg-tgattttgagtcaaaaattgatcataaatcacccctctttggtg 46589158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 22032140 - 22032228
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgatttt-gggtcaaaaattgaccataaattacctctttttggtgaatgaa 106  Q
    |||||||||||||  |||||||||| | | |||||||||||||||| |||||||||||||||| ||||| | | || ||||||| |||||    
T  22032140 atttcaataaaaggaaaagagaaaa-caatttagaggggtgatttttgggtcaaaaattgaccctaaatcatccctctttggtggatgaa 22032228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 1768030 - 1767986
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattt 62  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||    
T  1768030 atttcaataaaagggaaagagaaaaacgaattagaggagtgattt 1767986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 23257152 - 23257108
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattt 62  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||    
T  23257152 atttcaataaaagggaaagggaaaaacgagtgagaggggtgattt 23257108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 33703559 - 33703626
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagagggg-tgattttgggtcaaaaattgaccataaat 85  Q
    ||||||||||||| |||| |||||| |||||  |||||| ||||||||||| |||||||||||||||||    
T  33703559 atttcaataaaagggaaatagaaaa-cgagtgtgagggggtgattttgggtaaaaaattgaccataaat 33703626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 40488447 - 40488491
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattt 62  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||    
T  40488447 atttcaataaaagggaaagagaaaaataagttagaggggtgattt 40488491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 12148098 - 12148180
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtg 100  Q
    |||| |||||||  |||| ||||||||||||||||| |||  |||||||||||||| ||||  ||||| ||| || |||||||    
T  12148098 atttgaataaaaaggaaatagaaaaacgagttagagtggtatttttgggtcaaaaactgacgctaaatcaccgctctttggtg 12148180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 15698264 - 15698230
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttaga 52  Q
    ||||||||||||| |||||||||||||||||||||    
T  15698264 atttcaataaaagggaaagagaaaaacgagttaga 15698230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 32539240 - 32539298
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagag-gggtgattttgggtcaaaaatt 75  Q
    ||||||||||||  |||||||||||| ||||||| |  |||||||||||||||||||||    
T  32539240 atttcaataaaaatgaaagagaaaaatgagttagtgaaggtgattttgggtcaaaaatt 32539298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 37685168 - 37685206
Alignment:
Q  40 aaaacgagttagaggggtgattttgggtcaaaaattgac 78  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  37685168 aaaacgagttagaggattgattttgggtcaaaaattgac 37685206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 37700350 - 37700312
Alignment:
Q  40 aaaacgagttagaggggtgattttgggtcaaaaattgac 78  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  37700350 aaaacgagttagaggattgattttgggtcaaaaattgac 37700312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 5576 - 5650
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctct 92  Q
    |||||||||||||||||| |||||||||||||| |||||  |||||| |||||||||||||| ||||| ||||||    
T  5576 atttcaataaaagagaaatagaaaaacgagttaaaggggcaattttgagtcaaaaattgaccctaaataacctct 5650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 11827 - 11887
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgac 78  Q
    ||||||||||||| |||| |||||||||||||||| | |||||||||||||||||||||||    
T  11827 atttcaataaaagggaaatagaaaaacgagttagatgagtgattttgggtcaaaaattgac 11887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 10376 - 10434
Alignment:
Q  19 tttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattga 77  Q
    |||||||||||| ||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  10376 tttcaataaaagggaaagagaaaaacaagttagaagggtggttttgggtcaaaaattga 10434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 12253 - 12314
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgacc 79  Q
    ||||||||||||| ||||||||| |||||| ||||| | |||||||||||||||||||||||    
T  12253 atttcaataaaagggaaagagaagaacgagctagagagatgattttgggtcaaaaattgacc 12314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 11083 - 10985
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaa 116  Q
    |||||||||| || |||| ||||||| |||||||||||||||||||  ||||||||||||||  |||| |||  | ||||||| ||||  |||||||||    
T  11083 atttcaataagagggaaaaagaaaaatgagttagaggggtgattttaagtcaaaaattgacccaaaatcacccatctttggtgtatgatagagaagaaa 10985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 1191 - 1262
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacct 90  Q
    ||||||||||||| ||||||||||||||||||||| |  |||||||| ||| |||||||| ||||||| ||||    
T  1191 atttcaataaaagggaaagagaaaaacgagttagatgattgattttgagtc-aaaattgatcataaatcacct 1262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 36593 - 36541
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaa 70  Q
    ||||||||||||| ||||  ||||||||||||||| |||||||||| ||||||    
T  36593 atttcaataaaagggaaaaggaaaaacgagttagaagggtgattttaggtcaa 36541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 244700 - 244656
Alignment:
Q  18 atttcaataaaagagaaagagaaaaacgagttagaggggtgattt 62  Q
    ||||||||||||   ||||||||||||||||||||||||||||||    
T  244700 atttcaataaaaagaaaagagaaaaacgagttagaggggtgattt 244656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 105098 - 105028
Alignment:
Q  36 gagaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaa 106  Q
    |||||||||||  ||||||| |||||| ||||||||| |||||| ||||  |||||| ||||||| |||||    
T  105098 gagaaaaacgatgtagagggctgatttggggtcaaaatttgaccttaaaccacctctctttggtggatgaa 105028  T

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Target: scaffold0665 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 1174 - 1271
Alignment:
Q  50 agaggggtgattttgggtcaaaaattgaccataaattacctctttttggtgaatgaatgagaagaaaaactagagttttgacgacggttgacaagagaga 149  Q
    |||||| ||||||||||||||||||||||| ||||| |||  | ||||||| ||||| ||||||   ||||||||||| |  ||||| | ||||||||||    
T  1174 agagggatgattttgggtcaaaaattgacc-taaatcacccatctttggtggatgaaagagaag--taactagagtttaggtgacggctcacaagagaga 1270  T

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