View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20220_high_4 (Length: 371)
Name: NF20220_high_4
Description: NF20220
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20220_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 11 - 337
Target Start/End: Original strand, 31434203 - 31434528
Alignment:
| Q |
11 |
cagagaatgtttcccagggttttaaatttagcaaacaactgctatattttagacctctgatgcatgttagacttgagaaagacctctgatgctgtcaaag |
110 |
Q |
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| T |
31434203 |
cagagaatgtttcccagggttttaactttagcaaagaactgctatattttagacctctgatgcatgttagacttgagaaagacctctgatgctgtcaaag |
31434302 |
T |
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| Q |
111 |
gtgaaacatatgaaagctcttttacagtaaagtgttgtaaaatgttactaacatcttaaataaagactctgttttttaacaacactttttagatataatt |
210 |
Q |
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| T |
31434303 |
gtgaaacatatgaaagctcttttacagtaaagtgttgtaaaatgttactaacatcttaaataaagactctgttttttaacaacaccttttagatataatt |
31434402 |
T |
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| Q |
211 |
gctgttaaaggggtgatagtatttcttcattccggacccggtgaagtaacaccgacgtttcattctagttcttccttccatannnnnnnnnacttttgac |
310 |
Q |
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| T |
31434403 |
gttgttaaaggggtgatagtatttcttcattccggacccggtgaagtaacaccgacgtttcattctagttcttccttccata-ttttttttacttttgac |
31434501 |
T |
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| Q |
311 |
tcaagttctttgtcctatatcactaac |
337 |
Q |
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||||||||||||||||||||||||||| |
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| T |
31434502 |
tcaagttctttgtcctatatcactaac |
31434528 |
T |
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