View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20220_low_3 (Length: 508)

Name: NF20220_low_3
Description: NF20220
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20220_low_3
NF20220_low_3
[»] chr3 (44 HSPs)
chr3 (250-494)||(48705313-48705554)
chr3 (242-498)||(48715295-48715551)
chr3 (1-105)||(36750050-36750154)
chr3 (1-111)||(36750376-36750486)
chr3 (4-110)||(19132754-19132860)
chr3 (1-113)||(52492218-52492330)
chr3 (1-112)||(32490134-32490245)
chr3 (1-110)||(19132563-19132672)
chr3 (3-111)||(41755498-41755606)
chr3 (1-110)||(38923604-38923713)
chr3 (1-109)||(38922744-38922852)
chr3 (1-109)||(45242067-45242175)
chr3 (1-111)||(41756371-41756481)
chr3 (1-111)||(44687102-44687212)
chr3 (1-110)||(45242926-45243035)
chr3 (4-108)||(3970994-3971098)
chr3 (4-108)||(3998783-3998887)
chr3 (4-110)||(32489946-32490052)
chr3 (1-111)||(44686254-44686363)
chr3 (1-111)||(3971841-3971951)
chr3 (1-111)||(3997927-3998037)
chr3 (1-110)||(52491891-52491995)
chr3 (127-180)||(48715120-48715173)
chr3 (8-86)||(45500497-45500575)
chr3 (63-110)||(31556217-31556264)
chr3 (61-112)||(37105076-37105127)
chr3 (61-111)||(14667296-14667345)
chr3 (61-110)||(49757181-49757230)
chr3 (61-109)||(42145277-42145325)
chr3 (64-110)||(17226968-17227014)
chr3 (61-111)||(49756274-49756324)
chr3 (63-110)||(21811879-21811926)
chr3 (63-110)||(31556188-31556235)
chr3 (61-108)||(32994927-32994974)
chr3 (61-112)||(46719659-46719710)
chr3 (8-86)||(8440155-8440233)
chr3 (61-99)||(37104363-37104401)
chr3 (76-110)||(38923438-38923472)
chr3 (76-110)||(45242307-45242341)
chr3 (69-110)||(17227955-17227996)
chr3 (62-111)||(43638078-43638127)
chr3 (62-111)||(49749124-49749173)
chr3 (63-103)||(38337478-38337518)
chr3 (62-110)||(39901846-39901894)
[»] chr6 (29 HSPs)
chr6 (1-108)||(3542816-3542923)
chr6 (1-110)||(3543002-3543111)
chr6 (1-110)||(33480567-33480676)
chr6 (6-111)||(7193337-7193442)
chr6 (1-108)||(33479698-33479805)
chr6 (1-112)||(33018355-33018466)
chr6 (1-110)||(15083257-15083366)
chr6 (1-110)||(22579935-22580044)
chr6 (1-110)||(33018167-33018276)
chr6 (1-105)||(15082402-15082506)
chr6 (1-111)||(7193517-7193627)
chr6 (1-106)||(22587249-22587354)
chr6 (3-106)||(22582420-22582523)
chr6 (61-110)||(24125972-24126021)
chr6 (57-110)||(24126713-24126766)
chr6 (62-111)||(7159341-7159390)
chr6 (62-110)||(7531829-7531877)
chr6 (63-105)||(10607406-10607448)
chr6 (61-103)||(10608319-10608361)
chr6 (62-112)||(14337557-14337607)
chr6 (76-110)||(15082638-15082672)
chr6 (76-110)||(22580597-22580631)
chr6 (76-110)||(22587083-22587117)
chr6 (76-110)||(33479938-33479972)
chr6 (10-111)||(1035351-1035452)
chr6 (62-111)||(7532440-7532489)
chr6 (37-85)||(4311163-4311211)
chr6 (62-110)||(9574571-9574619)
chr6 (8-96)||(25067796-25067884)
[»] chr8 (29 HSPs)
chr8 (3-112)||(34992205-34992314)
chr8 (8-110)||(5035222-5035324)
chr8 (1-111)||(5034897-5035007)
chr8 (1-111)||(41859309-41859419)
chr8 (1-103)||(37639718-37639820)
chr8 (1-110)||(32536708-32536817)
chr8 (3-110)||(34992015-34992122)
chr8 (1-110)||(38023624-38023733)
chr8 (3-111)||(41860037-41860145)
chr8 (1-111)||(32537427-32537534)
chr8 (62-111)||(25876520-25876569)
chr8 (38-102)||(37640538-37640601)
chr8 (62-111)||(61453-61502)
chr8 (61-110)||(27918046-27918095)
chr8 (62-110)||(1365829-1365877)
chr8 (73-111)||(44098432-44098470)
chr8 (61-110)||(41092172-41092221)
chr8 (62-110)||(39254787-39254835)
chr8 (61-108)||(41348146-41348193)
chr8 (63-110)||(43924490-43924537)
chr8 (9-111)||(30272903-30273005)
chr8 (62-103)||(4364046-4364087)
chr8 (62-111)||(7424562-7424611)
chr8 (9-110)||(36936644-36936745)
chr8 (62-111)||(39255752-39255801)
chr8 (62-111)||(44751607-44751656)
chr8 (62-110)||(62240-62288)
chr8 (62-110)||(36936418-36936466)
chr8 (62-110)||(42345166-42345214)
[»] chr1 (48 HSPs)
chr1 (1-110)||(23440804-23440913)
chr1 (1-110)||(16270207-16270316)
chr1 (1-110)||(43737729-43737838)
chr1 (1-111)||(43737917-43738027)
chr1 (1-111)||(48972384-48972494)
chr1 (1-110)||(9948826-9948935)
chr1 (1-111)||(51974436-51974546)
chr1 (1-110)||(9947995-9948104)
chr1 (1-110)||(16271087-16271196)
chr1 (3-110)||(50827032-50827138)
chr1 (11-110)||(193850-193949)
chr1 (1-110)||(23440617-23440726)
chr1 (1-110)||(51975166-51975275)
chr1 (3-110)||(48971705-48971812)
chr1 (1-110)||(38930312-38930421)
chr1 (8-96)||(6075988-6076076)
chr1 (3-108)||(38931188-38931293)
chr1 (1-96)||(6076806-6076901)
chr1 (16-80)||(27888701-27888765)
chr1 (8-86)||(12925897-12925975)
chr1 (8-86)||(31390769-31390847)
chr1 (8-92)||(47334217-47334301)
chr1 (61-111)||(1012546-1012596)
chr1 (8-86)||(20794313-20794391)
chr1 (11-75)||(40649516-40649580)
chr1 (9-75)||(17050488-17050554)
chr1 (62-111)||(51987826-51987875)
chr1 (10-110)||(47334848-47334948)
chr1 (8-83)||(46133720-46133795)
chr1 (62-111)||(35616775-35616824)
chr1 (62-111)||(45064685-45064734)
chr1 (64-109)||(49611562-49611607)
chr1 (62-110)||(8560839-8560887)
chr1 (62-110)||(49610706-49610754)
chr1 (372-428)||(51164776-51164832)
chr1 (62-110)||(51988464-51988512)
chr1 (61-111)||(1013471-1013521)
chr1 (76-110)||(16270901-16270935)
chr1 (76-110)||(38930574-38930608)
chr1 (61-111)||(45065385-45065435)
chr1 (62-104)||(48870753-48870795)
chr1 (62-110)||(194701-194749)
chr1 (63-111)||(8561737-8561785)
chr1 (19-111)||(11032176-11032268)
chr1 (63-103)||(14924681-14924721)
chr1 (63-103)||(14925343-14925383)
chr1 (62-110)||(37874064-37874112)
chr1 (64-112)||(48869767-48869815)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-112)||(99-210)
[»] chr4 (67 HSPs)
chr4 (1-111)||(11417686-11417796)
chr4 (1-111)||(26611222-26611332)
chr4 (1-111)||(10424998-10425108)
chr4 (1-110)||(11417876-11417985)
chr4 (1-112)||(31836399-31836510)
chr4 (1-111)||(21166314-21166424)
chr4 (1-111)||(29651271-29651381)
chr4 (1-110)||(10424123-10424232)
chr4 (1-110)||(36865656-36865765)
chr4 (1-110)||(38694893-38695002)
chr4 (1-110)||(45230365-45230474)
chr4 (8-110)||(39523217-39523319)
chr4 (1-106)||(38143676-38143781)
chr4 (1-110)||(38694702-38694811)
chr4 (3-111)||(9939312-9939420)
chr4 (1-105)||(26610350-26610454)
chr4 (1-110)||(45235899-45236008)
chr4 (1-109)||(29650416-29650524)
chr4 (1-109)||(36864818-36864926)
chr4 (1-111)||(39522374-39522484)
chr4 (1-110)||(21165447-21165556)
chr4 (1-92)||(38143506-38143597)
chr4 (1-110)||(31835148-31835257)
chr4 (1-111)||(9939124-9939231)
chr4 (10-96)||(25970120-25970205)
chr4 (8-72)||(11806129-11806193)
chr4 (61-112)||(47377597-47377648)
chr4 (18-110)||(30808621-30808713)
chr4 (62-105)||(3847891-3847934)
chr4 (1-96)||(36450742-36450837)
chr4 (62-112)||(47198603-47198653)
chr4 (62-111)||(42544487-42544536)
chr4 (57-110)||(47376852-47376905)
chr4 (8-96)||(36451373-36451461)
chr4 (10-110)||(38014870-38014970)
chr4 (62-105)||(3848578-3848621)
chr4 (8-83)||(17648090-17648165)
chr4 (61-103)||(11680283-11680325)
chr4 (61-103)||(11688562-11688604)
chr4 (15-93)||(23383327-23383405)
chr4 (63-105)||(25370511-25370553)
chr4 (1-111)||(25970742-25970852)
chr4 (61-111)||(28684231-28684281)
chr4 (61-110)||(37275088-37275137)
chr4 (63-112)||(46765169-46765218)
chr4 (62-111)||(52757812-52757861)
chr4 (62-110)||(25371545-25371593)
chr4 (9-111)||(12589286-12589388)
chr4 (62-113)||(55159177-55159228)
chr4 (76-110)||(10424385-10424419)
chr4 (61-103)||(12590202-12590244)
chr4 (76-110)||(21166137-21166171)
chr4 (61-111)||(23425206-23425256)
chr4 (61-103)||(25655638-25655680)
chr4 (76-110)||(29650655-29650689)
chr4 (76-110)||(31836221-31836255)
chr4 (61-111)||(31910553-31910603)
chr4 (76-110)||(45235733-45235767)
chr4 (62-111)||(30478308-30478357)
chr4 (61-110)||(42545562-42545611)
chr4 (62-111)||(47199395-47199444)
chr4 (62-111)||(48013316-48013365)
chr4 (62-111)||(55160067-55160115)
chr4 (63-111)||(11681275-11681323)
chr4 (63-111)||(11689554-11689602)
chr4 (66-110)||(23865321-23865365)
chr4 (61-109)||(52758709-52758757)
[»] chr2 (24 HSPs)
chr2 (8-110)||(14573261-14573363)
chr2 (1-111)||(37547997-37548107)
chr2 (1-110)||(21471893-21472002)
chr2 (1-111)||(21471016-21471126)
chr2 (1-112)||(38834385-38834496)
chr2 (1-111)||(38834575-38834685)
chr2 (11-110)||(4479651-4479750)
chr2 (1-111)||(14573938-14574048)
chr2 (1-110)||(13134318-13134427)
chr2 (62-110)||(33433160-33433208)
chr2 (30-85)||(30486909-30486964)
chr2 (62-112)||(5276463-5276513)
chr2 (74-111)||(1164788-1164825)
chr2 (61-110)||(16426553-16426602)
chr2 (61-110)||(40992222-40992271)
chr2 (63-111)||(41984726-41984774)
chr2 (61-112)||(2650227-2650278)
chr2 (61-111)||(24727820-24727870)
chr2 (68-110)||(24741811-24741853)
chr2 (61-111)||(30545434-30545484)
chr2 (62-111)||(4478850-4478899)
chr2 (62-111)||(19521917-19521966)
chr2 (63-112)||(41043329-41043378)
chr2 (58-110)||(30544727-30544779)
[»] chr7 (40 HSPs)
chr7 (1-110)||(17145622-17145731)
chr7 (1-110)||(38072230-38072339)
chr7 (8-108)||(7677755-7677855)
chr7 (8-110)||(38779509-38779611)
chr7 (1-106)||(4261209-4261314)
chr7 (1-111)||(38071897-38072007)
chr7 (1-111)||(38778853-38778963)
chr7 (5-110)||(668179-668284)
chr7 (1-111)||(37864246-37864356)
chr7 (1-110)||(669042-669151)
chr7 (1-111)||(4261535-4261645)
chr7 (29-110)||(37468972-37469053)
chr7 (3-106)||(7677421-7677524)
chr7 (1-110)||(17145811-17145920)
chr7 (14-111)||(41194512-41194608)
chr7 (53-111)||(37468909-37468967)
chr7 (10-110)||(24322299-24322399)
chr7 (12-112)||(44909309-44909409)
chr7 (61-111)||(29006346-29006396)
chr7 (62-103)||(20890206-20890247)
chr7 (63-111)||(45887981-45888029)
chr7 (63-111)||(47331954-47332002)
chr7 (61-111)||(29007198-29007248)
chr7 (61-111)||(41224842-41224892)
chr7 (19-96)||(40257759-40257836)
chr7 (19-96)||(42607095-42607172)
chr7 (63-111)||(4985395-4985443)
chr7 (63-111)||(4989493-4989541)
chr7 (18-110)||(27599211-27599303)
chr7 (61-113)||(29314578-29314630)
chr7 (63-103)||(45887286-45887326)
chr7 (8-111)||(29315257-29315360)
chr7 (63-110)||(41533896-41533943)
chr7 (8-110)||(27600041-27600143)
chr7 (8-86)||(32859257-32859335)
chr7 (76-109)||(668420-668453)
chr7 (61-110)||(44896046-44896095)
chr7 (64-105)||(48259820-48259861)
chr7 (63-111)||(24321424-24321472)
chr7 (63-103)||(24322429-24322469)
[»] chr5 (32 HSPs)
chr5 (1-110)||(15183956-15184065)
chr5 (1-111)||(8204119-8204229)
chr5 (1-111)||(33002755-33002865)
chr5 (1-110)||(686417-686525)
chr5 (3-111)||(8040194-8040302)
chr5 (8-111)||(33001931-33002034)
chr5 (1-111)||(36626569-36626679)
chr5 (9-111)||(12190105-12190207)
chr5 (1-110)||(15183088-15183198)
chr5 (3-109)||(687289-687395)
chr5 (1-111)||(8040383-8040493)
chr5 (10-111)||(33283971-33284072)
chr5 (63-110)||(39950404-39950451)
chr5 (10-106)||(33283169-33283265)
chr5 (63-110)||(2319266-2319313)
chr5 (61-104)||(4607470-4607513)
chr5 (8-110)||(16970979-16971081)
chr5 (61-110)||(4608589-4608638)
chr5 (62-111)||(13654932-13654981)
chr5 (63-111)||(2319968-2320016)
chr5 (63-111)||(26268343-26268391)
chr5 (31-83)||(33685772-33685824)
chr5 (74-110)||(39950444-39950480)
chr5 (60-111)||(13404701-13404752)
chr5 (63-110)||(26269022-26269069)
chr5 (76-110)||(686667-686701)
chr5 (61-111)||(2458353-2458403)
chr5 (62-111)||(8226641-8226690)
chr5 (61-110)||(31148444-31148493)
chr5 (64-105)||(39167442-39167483)
chr5 (62-110)||(26688166-26688214)
chr5 (62-110)||(26957897-26957945)
[»] scaffold0041 (2 HSPs)
scaffold0041 (8-110)||(27221-27323)
scaffold0041 (33-110)||(27546-27623)
[»] scaffold0332 (1 HSPs)
scaffold0332 (1-110)||(9197-9306)
[»] scaffold0155 (1 HSPs)
scaffold0155 (61-110)||(17339-17388)
[»] scaffold0700 (1 HSPs)
scaffold0700 (14-85)||(5344-5415)


Alignment Details
Target: chr3 (Bit Score: 223; Significance: 1e-122; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 250 - 494
Target Start/End: Original strand, 48705313 - 48705554
Alignment:
Q  250 gcaattagtaagaattaccgtgtgcagctgcagcgacgacgtccctatgagaatcccttacgatgagttgaattctggttttgtaatgagaatgagagag 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48705313 gcaattagtaagaattaccgtgtgcagctgcagcgacgacgtccctatgagaatcccttacgatgagttgaattctggttttgtaatgagaatgagagag 48705412  T
Q  350 atagaaatctgagagtgacatgtttatgcagctcaatcctatcttcccaaccgtttcattactgctaatatcaattacagctcccactttcactacaata 449  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48705413 atagaaatctgagagtgacatgtttatgcagctcaatcctatcttcccaaccgtttcattactgctaatatcaattacagctcccactttcactacaata 48705512  T
Q  450 ttactttcatttttagtaatttgtgccaatattccacccaaaaga 494  Q
    ||||||||||| |   || ||||||||||||||||||||||||||    
T  48705513 ttactttcattct---tactttgtgccaatattccacccaaaaga 48705554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 242 - 498
Target Start/End: Original strand, 48715295 - 48715551
Alignment:
Q  242 agagagatgcaattagtaagaattaccgtgtgcagctgcagcgacgacgtccctatgagaatcccttacgatgagttgaattctggttttgtaatgagaa 341  Q
    |||||| |||||||||||| |||||||||||||||| |||| |||||||||| |||| |||||||| | |||||||||||||||||||||||||||||||    
T  48715295 agagaggtgcaattagtaataattaccgtgtgcagcggcagagacgacgtccttatgggaatccctaaggatgagttgaattctggttttgtaatgagaa 48715394  T
Q  342 tgagagagatagaaatctgagagtgacatgtttatgcagctcaatcctatcttcccaaccgtttcattactgctaatatcaattacagctcccactttca 441  Q
    ||||| |||||||||||||| || |||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  48715395 tgagaaagatagaaatctgaaagagacatgtttatgcagctcaatcctattttcccaaccgttccattactgctaacatcaattacagctcccactttca 48715494  T
Q  442 ctacaatattactttcatttttagtaatttgtgccaatattccacccaaaagaataa 498  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  48715495 ctacaatattactctcatttttagtaatttgtgccaatattccacccaaaagaataa 48715551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 36750154 - 36750050
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  36750154 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaacttttccatggtggaaaagaactctcctttcccaaatt 36750055  T
Q  101 aaatg 105  Q
    |||||    
T  36750054 aaatg 36750050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 36750376 - 36750486
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||  ||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36750376 tctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatgaacatgatcaactttcccatggtgggaaagaactctcctttcccaaatt 36750475  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  36750476 aaatggcacct 36750486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 19132754 - 19132860
Alignment:
Q  4 agtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaa 103  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  19132754 agtggttgagagagtatgataagaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactttcctttcccaaattaaa 19132853  T
Q  104 tggcacc 110  Q
    |||||||    
T  19132854 tggcacc 19132860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 52492218 - 52492330
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||| ||| ||||||| |||||||||||    
T  52492218 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatggacatgaacaacttttccatggtggaaaagaactctcatttcccaaatt 52492317  T
Q  101 aaatggcacctcc 113  Q
    ||||| |||||||    
T  52492318 aaatgacacctcc 52492330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 32490134 - 32490245
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||    
T  32490134 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaacttttccatggtgggaaagaactctcctttcccaaatt 32490233  T
Q  101 aaatggcacctc 112  Q
    |||||| |||||    
T  32490234 aaatggtacctc 32490245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19132672 - 19132563
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||||||||||||| || ||||| |||||||||||||||||||    
T  19132672 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatagtaggaaagaactctcctttcccaaatt 19132573  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  19132572 aaatggcacc 19132563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 41755606 - 41755498
Alignment:
Q  3 tagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaa 102  Q
    ||||||||||||||||||||||  ||| | |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  41755606 tagtggttgagagagtatgatagaaatatgttcctcatttaatctaatgaacatgatcaattttctcatggtgggaaaaaactctcctttcccaaattaa 41755507  T
Q  103 atggcacct 111  Q
    ||| |||||    
T  41755506 atgacacct 41755498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38923604 - 38923713
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||  ||| | |||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||||    
T  38923604 tctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatgaacattatcaacttttccatggtgggaaagaactctcatttcccaaatt 38923703  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  38923704 aaatggcacc 38923713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 38922852 - 38922744
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | || |||||||||||||||| | |||||||||||||||||||| ||||| |||||||||||||||||||    
T  38922852 tctagtggttgagagagtatgataggaatatgtttctcatttaatctaatggatatgatcaactttcccatggtaggaaataactctcctttcccaaatt 38922753  T
Q  101 aaatggcac 109  Q
    |||||||||    
T  38922752 aaatggcac 38922744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 45242175 - 45242067
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||| ||| ||| ||||||| |||||||||||    
T  45242175 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatgatggaaaagaactctcatttcccaaatt 45242076  T
Q  101 aaatggcac 109  Q
    |||||||||    
T  45242075 aaatggcac 45242067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 41756371 - 41756481
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||| ||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| || ||    
T  41756371 tctaatggttgagagagtatgataggaatatgttcctcatttaatctaatgaacatgatcaactttcccatgatgggaaagaactctcctttcctaactt 41756470  T
Q  101 aaatggcacct 111  Q
    ||||| |||||    
T  41756471 aaatgacacct 41756481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 44687102 - 44687212
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||| ||||||||||||||||||| |||| | ||||||||||||||||||||| |||||||||||| ||||||||| ||| || ||||||||||||||||    
T  44687102 tctaatggttgagagagtatgataggaatattttcctcatttaatctaatgaatatgatcaacttttccatggtggaaaagaattctcctttcccaaatt 44687201  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  44687202 aaatggcacct 44687212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 45242926 - 45243035
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||  | |||||||||||||||||||||| ||| |||||| ||||||||||||    
T  45242926 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatagatatgatcaactttcccatggtggaaaagaactcttctttcccaaatt 45243025  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  45243026 aaatggcacc 45243035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 3971098 - 3970994
Alignment:
Q  4 agtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaa 103  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||| ||||||||  ||||||||||| ||||||||||||||    
T  3971098 agtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaacttttccatggtgaaaaaaaactctcatttcccaaattaaa 3970999  T
Q  104 tggca 108  Q
    |||||    
T  3970998 tggca 3970994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 3998783 - 3998887
Alignment:
Q  4 agtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaa 103  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||| ||||||||  ||||||||||| ||||||||||||||    
T  3998783 agtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaacttttccatggtgaaaaaaaactctcatttcccaaattaaa 3998882  T
Q  104 tggca 108  Q
    |||||    
T  3998883 tggca 3998887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 32490052 - 32489946
Alignment:
Q  4 agtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaa 103  Q
    |||||||||||||||||||||  ||| | ||||| ||||||||||||| |||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  32490052 agtggttgagagagtatgatagaaatatgttccttatttaatctaatggacatgatcaactttcccatggtggaaaagaattctcctttcccaaattaaa 32489953  T
Q  104 tggcacc 110  Q
    |||||||    
T  32489952 tggcacc 32489946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 44686363 - 44686254
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | || |||||||||||||||| ||||||||||||||| |||||| | ||||||||||||||| |||||||    
T  44686363 tctagtggttgagagagtatgataggaatatgtttctcatttaatctaatggacatgatcaactttctcatggt-gaaaaaaactctccttttccaaatt 44686265  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  44686264 aaatggcacct 44686254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 3971841 - 3971951
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||  ||| | ||||||||||||||||||| | |||||||||||||||||  ||||||| |||| || ||||| |||||    
T  3971841 tctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggatatgatcaactttcccatcatgggaaagaactttcatttcctaaatt 3971940  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  3971941 aaatggcacct 3971951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 3998037 - 3997927
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||  ||| | ||||||||||||||||||| | |||||||||||||||||  ||||||| |||| || ||||| |||||    
T  3998037 tctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggatatgatcaactttcccatcatgggaaagaactttcatttcctaaatt 3997938  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  3997937 aaatggcacct 3997927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 52491995 - 52491891
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||  ||| | ||||| ||||||||||||| |||||||||||||| |||     ||||| |||||||||||||||||||    
T  52491995 tctagtggttgagagagtatgatagaaatatgttccttatttaatctaatggacatgatcaacttttcca-----ggaaagaactctcctttcccaaatt 52491901  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  52491900 aaatggcacc 52491891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 48715120 - 48715173
Alignment:
Q  127 tcatttatccgtgaactgaaactcattcatatttatcacaattattaaggaaaa 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48715120 tcattcatccgtgaactgaaactcattcatatttatcacaattattaaggaaaa 48715173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 45500575 - 45500497
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactc 86  Q
    ||||||||||||  |||||||||| ||||||||||||||||||| |||| |||||||||||||| |||| || ||||||    
T  45500575 gttgagagagtagaataagaatgtgttcctcatttaatctaatggacataatcaactttcccattgtggaaacaaactc 45500497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 31556217 - 31556264
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  31556217 ctttcccatgatgggaaagaactctcctttcccaaattaaatggcacc 31556264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 37105076 - 37105127
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 112  Q
    ||||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  37105076 aactttcccatggtgggaaaaaagtctcgtttcccaaattaaacggcacctc 37105127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 14667345 - 14667296
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  14667345 aactttcccatggtgggaaaaaa-tctcctttcccaaattaaacggcacct 14667296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 49757181 - 49757230
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||||||||| |||||||| ||||||||||||||||||| ||||||    
T  49757181 aactttcccatggtaggaaaaaagtctcctttcccaaattaaacggcacc 49757230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 42145277 - 42145325
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 109  Q
    |||||||| ||||||| |||||| |||||||||||||||||||||||||    
T  42145277 aactttcctatggtggaaaaaaagtctcctttcccaaattaaatggcac 42145325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 17227014 - 17226968
Alignment:
Q  64 tttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||||||||| || ||||||||||||||||||||| ||||    
T  17227014 tttcccatggtgggaaagaaatctcctttcccaaattaaatgccacc 17226968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 49756324 - 49756274
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||||||||||||||||| |||  |||||| ||||||||||||||||||    
T  49756324 aactttcccatggtgggaaataacattccttttccaaattaaatggcacct 49756274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 21811926 - 21811879
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||||||| |||||||| |||| |||||||||||||| ||||||    
T  21811926 ctttcccatggtaggaaaaaagtctcatttcccaaattaaacggcacc 21811879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 31556235 - 31556188
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||||  ||||||| ||||||||||| |||||||||||||||||    
T  31556235 ctttcccatcatgggaaagaactctccttttccaaattaaatggcacc 31556188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 32994974 - 32994927
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 108  Q
    |||||||||||| |||||||||| | | ||||||||||||||||||||    
T  32994974 aactttcccatgatgggaaaaaaatgtgctttcccaaattaaatggca 32994927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 46719710 - 46719659
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 112  Q
    |||||||||||| || |||||||||  | |||||||||||||||||||||||    
T  46719710 aactttcccatgatgagaaaaaactagcatttcccaaattaaatggcacctc 46719659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 8440155 - 8440233
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactc 86  Q
    ||||||||||||  |||| ||||| |||| ||||||||| |||| |||| |||||||||  |||||||  |||||||||    
T  8440155 gttgagagagtagtataataatgtgttccacatttaatcaaatgcacattatcaactttttcatggtgaaaaaaaactc 8440233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 99
Target Start/End: Complemental strand, 37104401 - 37104363
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaat 99  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  37104401 aactttcccatggtggaaaaaaagtctcctttcccaaat 37104363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 110
Target Start/End: Complemental strand, 38923472 - 38923438
Alignment:
Q  76 ggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||| |||||||||||||||||||||||||||||    
T  38923472 ggaaagaactctcctttcccaaattaaatggcacc 38923438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 110
Target Start/End: Original strand, 45242307 - 45242341
Alignment:
Q  76 ggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||| |||||||||||||||||||||||||||||    
T  45242307 ggaaagaactctcctttcccaaattaaatggcacc 45242341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 17227955 - 17227996
Alignment:
Q  69 catggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||||||| || ||||||||||||||||||||| ||||    
T  17227955 catggtgggaaagaagtctcctttcccaaattaaatgccacc 17227996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 43638078 - 43638127
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  43638078 actttcccatgatgggaaagaagtttactttcccaaattaaatggcacct 43638127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 49749173 - 49749124
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||| ||| |||||||||| | ||||||||||| |||||||||||||    
T  49749173 actttcctatgatgggaaaaaaatttcctttcccaagttaaatggcacct 49749124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 38337478 - 38337518
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaa 103  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  38337478 ctttcccatggtgggaaacaacttccctttcccaaattaaa 38337518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 39901894 - 39901846
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||||||||||| ||||||| |||||||  ||||| ||||||    
T  39901894 actttcccatggtgggaaagaactctcatttcccaggttaaacggcacc 39901846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 7e-47; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 3542923 - 3542816
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3542923 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 3542824  T
Q  101 aaatggca 108  Q
    ||||||||    
T  3542823 aaatggca 3542816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 3543002 - 3543111
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3543002 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 3543101  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  3543102 aaatggcacc 3543111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 33480567 - 33480676
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  33480567 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaatt 33480666  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  33480667 aaatggcacc 33480676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 7193442 - 7193337
Alignment:
Q  6 tggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatg 105  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7193442 tggttgagagagtatgataagaatatgttcctcatttaatctaatggagatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatg 7193343  T
Q  106 gcacct 111  Q
    ||||||    
T  7193342 gcacct 7193337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 33479805 - 33479698
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||  ||| | ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  33479805 tctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaataactctcctttcccaaatt 33479706  T
Q  101 aaatggca 108  Q
    ||||||||    
T  33479705 aaatggca 33479698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 33018355 - 33018466
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||  ||| | ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  33018355 tctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaatt 33018454  T
Q  101 aaatggcacctc 112  Q
    ||| | ||||||    
T  33018455 aaacgacacctc 33018466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 15083257 - 15083366
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||  | ||||||||||||| |||||||||||| |||||||||||||||||||    
T  15083257 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatagatatgatcaactttctcatggtgggaaagaactctcctttcccaaatt 15083356  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  15083357 aaatggcacc 15083366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 22580044 - 22579935
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||| |||||||||||||||| |||| | ||||||||||||||||||| | |||||||||||||||||||||| ||| |||||||||||||||||||    
T  22580044 tctagtgattgagagagtatgataggaatatgttcctcatttaatctaatggatatgatcaactttcccatggtggaaaagaactctcctttcccaaatt 22579945  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  22579944 aaatggcacc 22579935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 33018276 - 33018167
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||| |||||||||||||||||||| ||| | ||||||||||||||||||| |||||||||||||||| ||| ||||||| |||||||||||||||||||    
T  33018276 tctaatggttgagagagtatgataaaaatatgttcctcatttaatctaatggacatgatcaactttccaatgatgggaaagaactctcctttcccaaatt 33018177  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  33018176 aaatggcacc 33018167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 15082506 - 15082402
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||| ||| ||| ||||||| |||||||||||    
T  15082506 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatgatggaaaagaactctcatttcccaaatt 15082407  T
Q  101 aaatg 105  Q
    |||||    
T  15082406 aaatg 15082402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 7193517 - 7193627
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||||| | |||||||||||||||||| ||| ||| |||||| ||||| ||||||    
T  7193517 tctagtggttgagagagtatgatagaaatatattcctcatttaatctaatggatatgatcaactttcccatgatggaaaagaactctactttctcaaatt 7193616  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  7193617 aaatggcacct 7193627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 22587249 - 22587354
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||| ||||| |||||| |||  ||| | ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  22587249 tctagtgattgagtgagtataatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaatt 22587348  T
Q  101 aaatgg 106  Q
    ||||||    
T  22587349 aaatgg 22587354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 22582420 - 22582523
Alignment:
Q  3 tagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaa 102  Q
    ||||| ||||| |||||| |||  ||| | ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22582420 tagtgattgagtgagtataatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaa 22582519  T
Q  103 atgg 106  Q
    ||||    
T  22582520 atgg 22582523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 24126021 - 24125972
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| ||||    
T  24126021 aactttcccatggtgggaaacaactcccctttcccaaattaaatgccacc 24125972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 24126713 - 24126766
Alignment:
Q  57 gatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||||| ||||    
T  24126713 gatcaactttcccatgatgggaaacaactcccctttcccaaattaaatgccacc 24126766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 7159341 - 7159390
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||| |||||||||| | | |||||||||||||||||||||||    
T  7159341 actttcccatgatgggaaaaaagtttgctttcccaaattaaatggcacct 7159390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 7531877 - 7531829
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||||| ||||| || ||||||||||||||||||||| ||||    
T  7531877 actttcccatggtaggaaagaagtctcctttcccaaattaaatgccacc 7531829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 10607448 - 10607406
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatg 105  Q
    |||||||||||||||||||||||   |||||||||||||||||    
T  10607448 ctttcccatggtgggaaaaaactagtctttcccaaattaaatg 10607406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 10608319 - 10608361
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 103  Q
    ||||||||||||||||||||||||   ||||||||||||||||    
T  10608319 aactttcccatggtgggaaaaaaccagcctttcccaaattaaa 10608361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 14337557 - 14337607
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 112  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||||    
T  14337557 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacctc 14337607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 110
Target Start/End: Original strand, 15082638 - 15082672
Alignment:
Q  76 ggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||| |||||||||||||||||||||||||||||    
T  15082638 ggaaagaactctcctttcccaaattaaatggcacc 15082672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 110
Target Start/End: Complemental strand, 22580631 - 22580597
Alignment:
Q  76 ggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||| |||||||||||||||||||||||||||||    
T  22580631 ggaaagaactctcctttcccaaattaaatggcacc 22580597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 110
Target Start/End: Complemental strand, 22587117 - 22587083
Alignment:
Q  76 ggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||| |||||||||||||||||||||||||||||    
T  22587117 ggaaagaactctcctttcccaaattaaatggcacc 22587083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 110
Target Start/End: Original strand, 33479938 - 33479972
Alignment:
Q  76 ggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||| |||||||||||||||||||||||||||||    
T  33479938 ggaaagaactctcctttcccaaattaaatggcacc 33479972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 1035351 - 1035452
Alignment:
Q  10 tgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 109  Q
    |||||||||||||| | ||||| || ||||||| |||||| |  ||  |  | |||||||||| |||||||||| |  ||||| ||||||||||||||||    
T  1035351 tgagagagtatgattaaaatgtgtttctcatttgatctaacggtcaaaaaaatctttcccatgatgggaaaaaattaaccttttccaaattaaatggcac 1035450  T
Q  110 ct 111  Q
    ||    
T  1035451 ct 1035452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 7532440 - 7532489
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||||||  ||| || ||||||||||||||||||||| |||||    
T  7532440 actttcccatggtgaaaaagaagtctcctttcccaaattaaatgccacct 7532489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 4311163 - 4311211
Alignment:
Q  37 tcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaact 85  Q
    |||||| ||| |||| |||| ||||||| ||||||||||||||||||||    
T  4311163 tcatttgatccaatgcacataatcaactctcccatggtgggaaaaaact 4311211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 9574571 - 9574619
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||| ||||||||||| || ||||||||||||| ||||||| ||||    
T  9574571 actttcctatggtgggaaagaagtctcctttcccaagttaaatgccacc 9574619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 25067796 - 25067884
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttccca 96  Q
    ||||||||| ||| |||||| |||||| || |||| ||| |||| |||  | ||||||||| ||||||||||| || | ||||||||||    
T  25067796 gttgagagactataataagattgtatttcttatttgatccaatggacaaaaacaactttcctatggtgggaaacaaatatcctttccca 25067884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 1e-45; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 34992205 - 34992314
Alignment:
Q  3 tagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaa 102  Q
    |||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34992205 tagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaa 34992304  T
Q  103 atggcacctc 112  Q
    ||||||||||    
T  34992305 atggcacctc 34992314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 5035222 - 5035324
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  5035222 gttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcctatggtggaaaagaactctcctttcccaaattaaatggc 5035321  T
Q  108 acc 110  Q
    |||    
T  5035322 acc 5035324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 5035007 - 5034897
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||| ||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  5035007 tctagtggttgagagagtatgatatgaatatgttcctcattcaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaatt 5034908  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  5034907 aaatggcacct 5034897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 41859419 - 41859309
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||| ||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||    
T  41859419 tctagtggttgagagagtatgatatgaatatgttcttcatttaatctaacggacatgatcaactttcccatggtgggaaagaactctcctttcccaaatt 41859320  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  41859319 aaatggcacct 41859309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 37639820 - 37639718
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||| ||| |||| | ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  37639820 tctagtggttgagagagtatcataggaatatgttcctcatttaatctaatgaatatgatcaactttcccatggtgggaaagaactctcctttcccaaatt 37639721  T
Q  101 aaa 103  Q
    |||    
T  37639720 aaa 37639718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 32536817 - 32536708
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | |||| |||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||| |||||    
T  32536817 tctagtggttgagagagtatgataggaatatgttccccatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcatttcctaaatt 32536718  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  32536717 aaatggcacc 32536708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 34992122 - 34992015
Alignment:
Q  3 tagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaa 102  Q
    ||||||||||||||||||||||  ||| | ||||||||||||||||||| |||||||||||||| ||||||||| ||| ||||||| |||||||||||||    
T  34992122 tagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaacttttccatggtggaaaataactctcgtttcccaaattaa 34992023  T
Q  103 atggcacc 110  Q
    ||||||||    
T  34992022 atggcacc 34992015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 38023733 - 38023624
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||  ||| | |||||||||||||||||||||||||||||||||| ||||| ||| ||| || ||||||||||||||||    
T  38023733 tctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatgaacatgatcaacttttccatgatggaaaagaattctcctttcccaaatt 38023634  T
Q  101 aaatggcacc 110  Q
    ||||| ||||    
T  38023633 aaatgacacc 38023624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 41860037 - 41860145
Alignment:
Q  3 tagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaa 102  Q
    |||||||||||| |||||||||  ||| | ||||||||||||||||||| |||||||||||||| |||| ||   ||| |||||| ||||||||||||||    
T  41860037 tagtggttgagaaagtatgatagaaatatgttcctcatttaatctaatggacatgatcaacttttccatagtaaaaaataactcttctttcccaaattaa 41860136  T
Q  103 atggcacct 111  Q
    |||||||||    
T  41860137 atggcacct 41860145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 32537427 - 32537534
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||||||| | ||||| ||||||| ||||| ||||||| ||||||| ||   ||| ||| ||||||| |||||||||||    
T  32537427 tctagtggttgagagagtatgataagaatatgttccttatttaatataatggacatgattaactttctca---tggaaaagaactctcatttcccaaatt 32537523  T
Q  101 aaatggcacct 111  Q
    |||||| ||||    
T  32537524 aaatggtacct 32537534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 25876569 - 25876520
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  25876569 actttcccatggtgggaaaaaaatcttctttcccaaattaaatggcacct 25876520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 37640538 - 37640601
Alignment:
Q  38 catttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaa 102  Q
    ||||||||||||| |||||||||||||| ||||| |||  |||||||||||||||||||||||||    
T  37640538 catttaatctaataaacatgatcaactt-cccatagtgtaaaaaaactctcctttcccaaattaa 37640601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 61502 - 61453
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  61502 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacct 61453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 27918046 - 27918095
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  27918046 aactttcccatggtgggaaaaaagtctcatttcccaaattaaacggcacc 27918095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 1365877 - 1365829
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||    
T  1365877 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacc 1365829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 111
Target Start/End: Original strand, 44098432 - 44098470
Alignment:
Q  73 gtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  44098432 gtgggaaagaactctcctttcccaaattaaatggcacct 44098470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 41092221 - 41092172
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||| |||||||||||||||||   |||||||||||||||||||||||    
T  41092221 aacttttccatggtgggaaaaaacaagcctttcccaaattaaatggcacc 41092172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 39254835 - 39254787
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||| ||||||||||| || ||||||||||||||||||||| ||||    
T  39254835 actttcctatggtgggaaagaagtctcctttcccaaattaaatgccacc 39254787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 41348193 - 41348146
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 108  Q
    ||||||||||||||||| |||||||  |||||||||||||||| ||||    
T  41348193 aactttcccatggtggggaaaaactaacctttcccaaattaaacggca 41348146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 43924537 - 43924490
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||||||||||||| ||||  |||||||||||||||||| ||||    
T  43924537 ctttcccatggtgggaaacaacttccctttcccaaattaaatgccacc 43924490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 30272903 - 30273005
Alignment:
Q  9 ttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 108  Q
    ||||| ||||||||||| | ||||||| ||||| |||||||||   |  |   ||||||||||| |||||||||| | | ||||||||||||||| ||||    
T  30272903 ttgagggagtatgataaaagtgtattcttcattgaatctaatggttaaaacttactttcccatgatgggaaaaaagtttgctttcccaaattaaacggca 30273002  T
Q  109 cct 111  Q
    |||    
T  30273003 cct 30273005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 4364087 - 4364046
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaa 103  Q
    ||||||||||| |||||||||| | |||||||||||||||||    
T  4364087 actttcccatgatgggaaaaaagtttcctttcccaaattaaa 4364046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 7424562 - 7424611
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||||||| |||||| ||| ||||| |||||||||| ||||||    
T  7424562 actttcccatggtggaaaaaaagtcttctttctcaaattaaattgcacct 7424611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 36936644 - 36936745
Alignment:
Q  9 ttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 108  Q
    ||||| ||||||||||| | ||||||| | ||| |||||||||   |  ||  ||||||||||| |||||||||| | | ||||||||||||||| ||||    
T  36936644 ttgagggagtatgataaaagtgtattctttattgaatctaatggttaaaatttactttcccatgatgggaaaaaagtttgctttcccaaattaaacggca 36936743  T
Q  109 cc 110  Q
    ||    
T  36936744 cc 36936745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 39255752 - 39255801
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||||||||||| || |||| |||||||| ||||||| |||||    
T  39255752 actttcccatggtgggaaagaagtctcatttcccaagttaaatgccacct 39255801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 44751656 - 44751607
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||| ||||||| || ||||||||||||| ||||||| |||||    
T  44751656 actttcccatgatgggaaagaagtctcctttcccaagttaaatgccacct 44751607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 62240 - 62288
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||| ||||||||||| || ||||||||| ||||||||||| ||||    
T  62240 actttcctatggtgggaaagaagtctcctttctcaaattaaatgtcacc 62288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 36936418 - 36936466
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||| |||||||||| | | ||||||||||||||| ||||||    
T  36936418 actttcccatgatgggaaaaaagtttgctttcccaaattaaacggcacc 36936466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 42345214 - 42345166
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||    
T  42345214 actttcccatgatgggaaagaagtttactttcccaaattaaatggcacc 42345166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 1e-45; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 23440804 - 23440913
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  23440804 tctagtggttgagagagtatgataggaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaatt 23440903  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  23440904 aaatggcacc 23440913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 16270316 - 16270207
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  16270316 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaatt 16270217  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  16270216 aaatggcacc 16270207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43737838 - 43737729
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||    
T  43737838 tctagtggttgagagagtatgataaaaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaataactctactttcccaaatt 43737739  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  43737738 aaatggcacc 43737729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 43737917 - 43738027
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||| ||||||| |||| | ||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||    
T  43737917 tctagtggttgagagaatatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttcccaaatt 43738016  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  43738017 aaatggcacct 43738027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 48972384 - 48972494
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | || |||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||    
T  48972384 tctagtggttgagagagtatgataggaatatgtttctcatttaatctaatggacatgatcaacttttccatggtgggaaagaactctcctttcccaaatt 48972483  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  48972484 aaatggcacct 48972494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 9948826 - 9948935
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||| ||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||    
T  9948826 tctagtggttgatagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcctaaatt 9948925  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  9948926 aaatggcacc 9948935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 51974546 - 51974436
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||| ||||||||||||||||| |||| | ||| ||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||    
T  51974546 tctagtagttgagagagtatgataggaatatgttcttcatttaatctaatagacatgatcaactttcccatggtgggaaagaactctcctttcccaaatt 51974447  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  51974446 aaatggcacct 51974436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9948104 - 9947995
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||| |||||||||||| ||||||||||||| |||| | ||||||||||||    
T  9948104 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgaatatgatcaacttttccatggtgggaaagaacttttctttcccaaatt 9948005  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  9948004 aaatggcacc 9947995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16271087 - 16271196
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||| || |||| ||||||||||||| |||||    
T  16271087 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgagaaagaactctcctttcctaaatt 16271186  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  16271187 aaatggcacc 16271196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 50827032 - 50827138
Alignment:
Q  3 tagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaa 102  Q
    ||||||||||||||||||||||| ||| | || |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  50827032 tagtggttgagagagtatgataaaaatatgtttctcatttaatctaatggacatgatcaactttcccatggtggg-aaaaactctcctttctcaaattaa 50827130  T
Q  103 atggcacc 110  Q
    ||||||||    
T  50827131 atggcacc 50827138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 193949 - 193850
Alignment:
Q  11 gagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||||||||||| | ||||||||||||| ||||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  193949 gagagagtatgataagaatatgttcctcatttaatttaatggacatgattaactttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 193850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23440726 - 23440617
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | || |||||||||||||||| |||| ||||||||| |||| || ||||| |||||||||||||||||||    
T  23440726 tctagtggttgagagagtatgataggaatatgtttctcatttaatctaatggacataatcaacttttccatagttggaaagaactctcctttcccaaatt 23440627  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  23440626 aaatggcacc 23440617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 51975166 - 51975275
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||| ||||||||||||| |||| | ||||||||||||||||||  ||||||||||||||||||| |||  ||| |||||||||||||||||||    
T  51975166 tctagtggttaagagagtatgataggaatatgttcctcatttaatctaattgacatgatcaactttcccatagtgaaaaagaactctcctttcccaaatt 51975265  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  51975266 aaatggcacc 51975275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 48971812 - 48971705
Alignment:
Q  3 tagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaa 102  Q
    |||||||||||||||||||||| |||| | ||||||||||||||||||  | ||||||||||||| ||| |||||||| |||||||||||||||||||||    
T  48971812 tagtggttgagagagtatgataggaatatgttcctcatttaatctaatttatatgatcaactttctcattgtgggaaagaactctcctttcccaaattaa 48971713  T
Q  103 atggcacc 110  Q
    ||| ||||    
T  48971712 atgacacc 48971705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 38930421 - 38930312
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||| ||||||| ||||| | |||||||||||||||||||||  ||| |||| ||||||||||||||    
T  38930421 tctagtggttgagagagtatgataggaatatgttccttatttaatttaatggatatgatcaactttcccatggtgaaaaagaactttcctttcccaaatt 38930322  T
Q  101 aaatggcacc 110  Q
    ||||| ||||    
T  38930321 aaatgacacc 38930312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 6076076 - 6075988
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttccca 96  Q
    ||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||| | ||| |||||||||||||||    
T  6076076 gttgagagactatgataaaaatgtattcctcatttaatctaatggacatgatcaactttctcatggtagaaaagaactctcctttccca 6075988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 38931188 - 38931293
Alignment:
Q  3 tagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaa 102  Q
    ||||||||||||||||||||||  ||| | || || ||||||| ||||| | |||||||||||||||||||| | ||| |||||| ||||||||||||||    
T  38931188 tagtggttgagagagtatgatagaaatatgtttcttatttaatttaatggatatgatcaactttcccatggtagaaaagaactcttctttcccaaattaa 38931287  T
Q  103 atggca 108  Q
    ||||||    
T  38931288 atggca 38931293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 6076806 - 6076901
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttccca 96  Q
    |||| ||||||||||||||||||| |||| | || |||||||||| ||||| |||||||||||||| |||| |||||||| ||||||| |||||||    
T  6076806 tctattggttgagagagtatgataggaatatgttactcatttaatataatggacatgatcaacttttccatagtgggaaagaactctcatttccca 6076901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 27888765 - 27888701
Alignment:
Q  16 agtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaa 80  Q
    ||||||||| |||| | ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27888765 agtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaa 27888701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 12925975 - 12925897
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactc 86  Q
    ||||||||||||  ||||||||||||||| |||||||||||||| |||| ||||||||| | ||||||| |||||||||    
T  12925975 gttgagagagtagtataagaatgtattccacatttaatctaatggacattatcaacttttctatggtggaaaaaaactc 12925897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 31390769 - 31390847
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactc 86  Q
    |||||||||||| ||||| ||||| ||||||||||| || |||| |||| ||||||||||||||||||||||| |||||    
T  31390769 gttgagagagtaggataaaaatgtgttcctcatttattccaatggacataatcaactttcccatggtgggaaagaactc 31390847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 47334301 - 47334217
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctccttt 92  Q
    |||||||||||| |||||| || | || |||||||||||||||| |||| |||||||||||||| |||||||| ||||| |||||    
T  47334301 gttgagagagtaggataaggatttgtttctcatttaatctaatggacataatcaactttcccattgtgggaaacaactccccttt 47334217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 1012596 - 1012546
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  1012596 aactttcccatggtgggaaaaaaatctcctttcccaaattaaacggcacct 1012546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 20794391 - 20794313
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactc 86  Q
    |||||||||||   |||||||||| |||| |||||||||||||| |||| ||||||||||| ||||||| |||||||||    
T  20794391 gttgagagagtgatataagaatgtgttccacatttaatctaatgcacattatcaactttcctatggtggaaaaaaactc 20794313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 40649516 - 40649580
Alignment:
Q  11 gagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtg 75  Q
    |||||||||  |||||||||| |||| |||||||||||||| |||| ||||||||||||||||||    
T  40649516 gagagagtagtataagaatgtgttccacatttaatctaatggacattatcaactttcccatggtg 40649580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 17050554 - 17050488
Alignment:
Q  9 ttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtg 75  Q
    |||||||||||  |||||||||| | ||  |||||||||||||||||| ||||||||||||||||||    
T  17050554 ttgagagagtagtataagaatgtgtaccatatttaatctaatgaacattatcaactttcccatggtg 17050488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 51987875 - 51987826
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  51987875 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacct 51987826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 47334848 - 47334948
Alignment:
Q  10 tgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 109  Q
    |||||||||| |||||  || | || ||||||||||| |||| |||| ||||||||||| ||||||||||| ||||| | ||||||| | |||||| |||    
T  47334848 tgagagagtaggataaagatttgttactcatttaatccaatggacataatcaactttcctatggtgggaaacaactcccttttcccatactaaatgccac 47334947  T
Q  110 c 110  Q
    |    
T  47334948 c 47334948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 46133795 - 46133720
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaa 83  Q
    ||||||||||||  ||||||||||  |||||||||||||| ||| |||| ||  |||||||||||||||| |||||    
T  46133795 gttgagagagtagtataagaatgtgctcctcatttaatctgatggacataattcactttcccatggtggggaaaaa 46133720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 35616775 - 35616824
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||||||||||| || ||||||||||||| ||||||| |||||    
T  35616775 actttcccatggtgggaaagaagtctcctttcccaagttaaatgccacct 35616824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 45064734 - 45064685
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||| ||||||||||||   |||||||||||||||||||||||    
T  45064734 actttcccatgatgggaaaaaactaatctttcccaaattaaatggcacct 45064685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 49611562 - 49611607
Alignment:
Q  64 tttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 109  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||||    
T  49611562 tttcccatgatgggaaaaaactagcctttcccaaattaaatggcac 49611607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 8560887 - 8560839
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||| ||||||| || ||||||||||||||||||||| ||||    
T  8560887 actttcccatgatgggaaagaagtctcctttcccaaattaaatgtcacc 8560839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 49610754 - 49610706
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||||||| ||||||||| ||| ||||||||||| ||||||||||    
T  49610754 actttcccatggagggaaaaaagtcttctttcccaaataaaatggcacc 49610706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 51164776 - 51164832
Alignment:
Q  372 tttatgcagctcaatcctatcttcccaaccgtttcattactgctaatatcaattaca 428  Q
    |||||||||||||||||||| |||| ||| ||| ||||||||| || ||||||||||    
T  51164776 tttatgcagctcaatcctattttcctaactgttccattactgccaacatcaattaca 51164832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 51988464 - 51988512
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  51988464 actttcccatggtggaaaagaagtctcctttcccaaattaaatgccacc 51988512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 1013471 - 1013521
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||||||||||||| ||| |||  ||||||||||||||||||| |||||    
T  1013471 aactttcccatggtggaaaataacattcctttcccaaattaaatgacacct 1013521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 110
Target Start/End: Complemental strand, 16270935 - 16270901
Alignment:
Q  76 ggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||| |||||||||||||||||||||||||||||    
T  16270935 ggaaagaactctcctttcccaaattaaatggcacc 16270901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 110
Target Start/End: Original strand, 38930574 - 38930608
Alignment:
Q  76 ggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||| |||||||||||||||||||||||||||||    
T  38930574 ggaaagaactctcctttcccaaattaaatggcacc 38930608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 45065385 - 45065435
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||||||||||||||||   | ||| ||||||||||||||||||    
T  45065385 aactttcccatggtgggaaaaaacaagctttttccaaattaaatggcacct 45065435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 48870753 - 48870795
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaat 104  Q
    |||||||||||||||||||||| |||| |||||||| ||||||    
T  48870753 actttcccatggtgggaaaaaagtctcatttcccaagttaaat 48870795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 194701 - 194749
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||    
T  194701 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 194749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 8561737 - 8561785
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||||||| ||||||||||||   ||||||||||||||||| |||||    
T  8561737 ctttcccatgatgggaaaaaactagtctttcccaaattaaatgtcacct 8561785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 11032176 - 11032268
Alignment:
Q  19 atgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||||| ||| | | |||||||||||  ||   ||||||||||||||||||||||  | || |||||||||  ||||||| |||||    
T  11032176 atgataagaatgtgttcattacttaatctaatggtcaaattcaactttcccatggtgggaaactattcccctttcccatgttaaatgccacct 11032268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 14924721 - 14924681
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaa 103  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  14924721 ctttcccatggtgggaaacaacttccctttcccaaattaaa 14924681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 14925343 - 14925383
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaa 103  Q
    |||||||||||||||||| |||| ||||| |||||||||||    
T  14925343 ctttcccatggtgggaaacaactttccttccccaaattaaa 14925383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 37874112 - 37874064
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||||||||||| || |||| |||||||| ||||||| ||||    
T  37874112 actttcccatggtgggaaagaagtctcatttcccaagttaaatgtcacc 37874064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 48869815 - 48869767
Alignment:
Q  64 tttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 112  Q
    ||||||||||||| ||| || ||||||||||||| ||||||| ||||||    
T  48869815 tttcccatggtggaaaagaagtctcctttcccaagttaaatgtcacctc 48869767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 99 - 210
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  99 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgaacataatcaactttcccatggtgggaaagaactctcctttcccaaatt 198  T
Q  101 aaatggcacctc 112  Q
    ||||||||||||    
T  199 aaatggcacctc 210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 7e-44; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 11417796 - 11417686
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  11417796 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaatt 11417697  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  11417696 aaatggcacct 11417686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 26611222 - 26611332
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26611222 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 26611321  T
Q  101 aaatggcacct 111  Q
    ||||| |||||    
T  26611322 aaatgacacct 26611332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 10424998 - 10425108
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||    
T  10424998 tctagtggttgagagagtatgataggaatatattcctcatttaatctaatggatatgatcaactttcccatggtgggaaagaactctcctttcctaaatt 10425097  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  10425098 aaatggcacct 10425108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 11417876 - 11417985
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  11417876 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaatt 11417975  T
Q  101 aaatggcacc 110  Q
    ||||| ||||    
T  11417976 aaatgacacc 11417985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 31836399 - 31836510
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||  ||| | ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||    
T  31836399 tctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttctcaaatt 31836498  T
Q  101 aaatggcacctc 112  Q
    ||||||||||||    
T  31836499 aaatggcacctc 31836510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 21166314 - 21166424
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||| ||||||    
T  21166314 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttctcaaatt 21166413  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  21166414 aaatggcacct 21166424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 29651271 - 29651381
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||  | |||||||||||||||||||||||||| |||||||||||||||||||    
T  29651271 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatagatatgatcaactttcccatggtgggaaagaactctcctttcccaaatt 29651370  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  29651371 aaatggcacct 29651381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 10424232 - 10424123
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||  ||| | ||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  10424232 tctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttcctatggtgggaaagaactctcctttcccaaatt 10424133  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  10424132 aaatggcacc 10424123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 36865656 - 36865765
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||    
T  36865656 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggatatgatcaactttcccatggtgggaaagaactctcctttcccaaatt 36865755  T
Q  101 aaatggcacc 110  Q
    ||||| ||||    
T  36865756 aaatgtcacc 36865765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38694893 - 38695002
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||  ||||||||||||||| |||||||||||| |||||||||||||||||||    
T  38694893 tctagtggttgagagagtatgatatgaatattttcctcatttaatctaatagacatgatcaactttctcatggtgggaaagaactctcctttcccaaatt 38694992  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  38694993 aaatggcacc 38695002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 45230474 - 45230365
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||| ||||    
T  45230474 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgaatatgatcaactttcccatggtgggaaagaactctcttttcccgaatt 45230375  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  45230374 aaatggcacc 45230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 39523217 - 39523319
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggc 107  Q
    |||||||||||||| |||  |||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  39523217 gttgagagagtatggtaaagatgtattcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggc 39523316  T
Q  108 acc 110  Q
    |||    
T  39523317 acc 39523319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 38143676 - 38143781
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  38143676 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgaccaactttcccatggtgggaaagaactctcatttcccaaatt 38143775  T
Q  101 aaatgg 106  Q
    ||||||    
T  38143776 aaatgg 38143781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 38694811 - 38694702
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||| |||||||||||| ||||| ||||||| ||||||||||| |||||||    
T  38694811 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgaatatgatcaacttttccatgctgggaaagaactctccttttccaaatt 38694712  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  38694711 aaatggcacc 38694702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 9939312 - 9939420
Alignment:
Q  3 tagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaa 102  Q
    |||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||| ||||||||    
T  9939312 tagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaacttttccatggtgggaaagaactcccctttctcaaattaa 9939411  T
Q  103 atggcacct 111  Q
    |||||||||    
T  9939412 atggcacct 9939420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 26610454 - 26610350
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  26610454 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaattttcccatggtgggaaagaactctcatttcccaaatt 26610355  T
Q  101 aaatg 105  Q
    |||||    
T  26610354 aaatg 26610350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 45235899 - 45236008
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||| |||||||  ||| | ||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||| |||||||    
T  45235899 tctagtggttgagagaatatgatagaaatatgttcctcatttaatctaatggacatgattaactttcccatggtgggaaagaactctccttttccaaatt 45235998  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  45235999 aaatggcacc 45236008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 29650524 - 29650416
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||| | ||| ||| ||||||| |||||||||||    
T  29650524 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccaagatggaaaagaactctcatttcccaaatt 29650425  T
Q  101 aaatggcac 109  Q
    |||||||||    
T  29650424 aaatggcac 29650416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 36864926 - 36864818
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | || |||||||||||||||| ||||||||||||||| ||||||| |||| |||||||||||||||||||    
T  36864926 tctagtggttgagagagtatgataggaatatgtttctcatttaatctaatggacatgatcaactttctcatggtgagaaagaactctcctttcccaaatt 36864827  T
Q  101 aaatggcac 109  Q
    |||| ||||    
T  36864826 aaatagcac 36864818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 39522484 - 39522374
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| | |||||||||||||||||||||  ||| |||| ||||||||||||||    
T  39522484 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggatatgatcaactttcccatggtgaaaaagaactatcctttcccaaatt 39522385  T
Q  101 aaatggcacct 111  Q
    ||||| |||||    
T  39522384 aaatgacacct 39522374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21165556 - 21165447
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||  ||| | |||||||||||||| |||| ||||||||||||||| |||||||||||| |||| | ||||||||||||    
T  21165556 tctagtggttgagagagtatgatagaaatatgttcctcatttaatcaaatggacatgatcaactttctcatggtgggaaagaactattctttcccaaatt 21165457  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  21165456 aaatggcacc 21165447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 38143597 - 38143506
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctccttt 92  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||| ||||||| ||| |||||||||||    
T  38143597 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcctatggtggaaaagaactctccttt 38143506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 31835257 - 31835148
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | |||||| |||||||||||| |||| ||||||||||| ||||||||||| |||| | ||||  ||||||    
T  31835257 tctagtggttgagagagtatgataggaatatgttcctcgtttaatctaatggacataatcaactttcctatggtgggaaagaactatactttttcaaatt 31835158  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  31835157 aaatggcacc 31835148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 9939231 - 9939124
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||||||| | || |||||||||||||||| ||||||||||||||||||| |    ||| |||||| ||||||||||||    
T  9939231 tctagtggttgagagagtatgataagaatatgtttctcatttaatctaatggacatgatcaactttcccataga---aaagaactctactttcccaaatt 9939135  T
Q  101 aaatggcacct 111  Q
    ||||| |||||    
T  9939134 aaatgacacct 9939124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 25970205 - 25970120
Alignment:
Q  10 tgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttccca 96  Q
    ||||||||||||||||  || | || |||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||||||||    
T  25970205 tgagagagtatgataaagatttgtttctcatttaatctaatggacat-atcaactttcccatggtgggaaacaactcccctttccca 25970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 11806193 - 11806129
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatg 72  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||| ||||||| ||||||||||||    
T  11806193 gttgagagagtaggataaaaatgtgttcctcatttaatctaatggacatgattaactttcccatg 11806129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 47377597 - 47377648
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 112  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  47377597 aactttcccatggtgggaaacaactcccctttcccaaattaaatggcacctc 47377648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 30808713 - 30808621
Alignment:
Q  18 tatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||||||||||||| | | |||||||||||  ||   | |||||||||||||||||||| |||||||||||||||  ||||||| ||||    
T  30808713 tatgataagaatgtattcattacttaatctaatggtcaaatttaactttcccatggtgggaaacaactctcctttcccattttaaatgccacc 30808621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 3847934 - 3847891
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatg 105  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  3847934 actttcccatggtgggaaaaaagtctcctttcccaaattaaatg 3847891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 36450837 - 36450742
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttccca 96  Q
    |||||||  |||||||||| |||||  || | || ||||||||||| |||| |||| ||||||||||||||||||| ||| ||||| |||||||||    
T  36450837 tctagtgtatgagagagtaggataaagatttgttactcatttaatccaatggacataatcaactttcccatggtggaaaacaactcccctttccca 36450742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 47198653 - 47198603
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 112  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||||    
T  47198653 actttcccatggtgggaaagaagtctcctttcccaaattaaatgtcacctc 47198603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 42544536 - 42544487
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  42544536 acttttccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 42544487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 47376905 - 47376852
Alignment:
Q  57 gatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||||| ||||    
T  47376905 gatcaactttcccatgatgggaaacaactcccctttcccaaattaaatgccacc 47376852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 36451373 - 36451461
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttccca 96  Q
    |||||||||||| |||||| || | ||  ||||||||||||||| |||| ||||||||| |||||||| |||| |||||  ||||||||    
T  36451373 gttgagagagtaggataaggatttgtttttcatttaatctaatggacataatcaacttttccatggtgagaaacaactcctctttccca 36451461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 38014870 - 38014970
Alignment:
Q  10 tgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 109  Q
    |||||||||||||| | ||||| |||||||||| |||||| |  ||  |  | ||||||||||||||| |||||||  |||||||||||||||| |||||    
T  38014870 tgagagagtatgattaaaatgtgttcctcatttgatctaacggtcaaaaaaacctttcccatggtggggaaaaactagcctttcccaaattaaacggcac 38014969  T
Q  110 c 110  Q
    |    
T  38014970 c 38014970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 3848578 - 3848621
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatg 105  Q
    ||||||||||||||||||| || |||||||||||||||||||||    
T  3848578 actttcccatggtgggaaagaagtctcctttcccaaattaaatg 3848621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 17648090 - 17648165
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaa 83  Q
    |||||||||||| ||||||||| |||| || ||||||||||||| | || |||||||||| ||| |||| ||||||    
T  17648090 gttgagagagtaagataagaatttatttcttatttaatctaatggatataatcaactttcacatagtggaaaaaaa 17648165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 11680325 - 11680283
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 103  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  11680325 aactttcccatggtgggaaaaaactaacctttcccaaattaaa 11680283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 11688604 - 11688562
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 103  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  11688604 aactttcccatggtgggaaaaaactaacctttcccaaattaaa 11688562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 23383405 - 23383327
Alignment:
Q  15 gagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttc 93  Q
    ||||||||||||| ||| ||| |||||| ||| |||| | |  || |||||||||||||||||||| ||||||||||||    
T  23383405 gagtatgataagagtgtgttcttcatttgatcgaatggataaaattaactttcccatggtgggaaacaactctcctttc 23383327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 25370553 - 25370511
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatg 105  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  25370553 ctttcccatggtgggaaaaaactagcctttcccaaattaaatg 25370511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 25970742 - 25970852
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||  |||||||||| |||||  || | || ||||||||||  |||| |||| |||||||||| |||||||||||| ||||| | ||||||| | |    
T  25970742 tctagtgtatgagagagtaggataaagatttgttactcatttaattcaatggacataatcaactttctcatggtgggaaacaactcccttttcccatact 25970841  T
Q  101 aaatggcacct 111  Q
    ||||| |||||    
T  25970842 aaatgccacct 25970852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 28684231 - 28684281
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||||| ||||| |||||||| ||||||||||||||||||||| |||||    
T  28684231 aactttcctatggtaggaaaaaagtctcctttcccaaattaaatgtcacct 28684281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 37275137 - 37275088
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||| |||||||||||| || ||||||||||||||||||| ||||||    
T  37275137 aactttctcatggtgggaaagaagtctcctttcccaaattaaacggcacc 37275088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 46765169 - 46765218
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 112  Q
    |||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  46765169 ctttcccatggtgggaaaaaactagtctttcccaaattaaatgccacctc 46765218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 52757861 - 52757812
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||| |||| ||||||||| ||| |||||||||||||||||||||||    
T  52757861 actttcctatggagggaaaaaagtcttctttcccaaattaaatggcacct 52757812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 25371545 - 25371593
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||| |||||||||||| || ||||||||||||||||||||| ||||    
T  25371545 actttctcatggtgggaaagaagtctcctttcccaaattaaatgtcacc 25371593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 12589388 - 12589286
Alignment:
Q  9 ttgagagagtatgataagaatgtattcctcatttaatctaatg-----aacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaa 103  Q
    ||||| |||||||||| |||||||||| |||||||||||||||     ||| ||     ||||||||| |||||||||||||   |||||||||||||||    
T  12589388 ttgagggagtatgatatgaatgtattcttcatttaatctaatggttgaaacttg-----ctttcccatagtgggaaaaaactaatctttcccaaattaaa 12589294  T
Q  104 tggcacct 111  Q
    || |||||    
T  12589293 tgtcacct 12589286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 55159228 - 55159177
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctcc 113  Q
    ||||||||||||| ||||| || ||||||||||||||||||||  |||||||    
T  55159228 actttcccatggtaggaaagaagtctcctttcccaaattaaataccacctcc 55159177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 110
Target Start/End: Original strand, 10424385 - 10424419
Alignment:
Q  76 ggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||| |||||||||||||||||||||||||||||    
T  10424385 ggaaagaactctcctttcccaaattaaatggcacc 10424419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 12590202 - 12590244
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 103  Q
    |||||||||||||||| ||||||||  ||||||||||||||||    
T  12590202 aactttcccatggtggaaaaaaactagcctttcccaaattaaa 12590244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 110
Target Start/End: Complemental strand, 21166171 - 21166137
Alignment:
Q  76 ggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||| |||||||||||||||||||||||||||||    
T  21166171 ggaaagaactctcctttcccaaattaaatggcacc 21166137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 23425206 - 23425256
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||||||||||||||||| |||||||| |||||| | |||||| |||||    
T  23425206 aactttcccatggtgggaaacaactctccattcccatactaaatgccacct 23425256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 25655638 - 25655680
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 103  Q
    |||||||||||||||||||||||||   |||||||||||||||    
T  25655638 aactttcccatggtgggaaaaaactagtctttcccaaattaaa 25655680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 110
Target Start/End: Original strand, 29650655 - 29650689
Alignment:
Q  76 ggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||| |||||||||||||||||||||||||||||    
T  29650655 ggaaagaactctcctttcccaaattaaatggcacc 29650689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 110
Target Start/End: Complemental strand, 31836255 - 31836221
Alignment:
Q  76 ggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||| |||||||||||||||||||||||||||||    
T  31836255 ggaaagaactctcctttcccaaattaaatggcacc 31836221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 31910603 - 31910553
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||||||||||||||||   ||||||| |||||||||| |||||    
T  31910603 aactttcccatggtgggaaaaaacaagcctttcctaaattaaatgacacct 31910553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 110
Target Start/End: Complemental strand, 45235767 - 45235733
Alignment:
Q  76 ggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||| |||||||||||||||||||||||||||||    
T  45235767 ggaaagaactctcctttcccaaattaaatggcacc 45235733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 30478357 - 30478308
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  30478357 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 30478308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 42545562 - 42545611
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||| ||| |||||||||| | | ||||||||||||||||||||||    
T  42545562 aactttcctatgatgggaaaaaagtgtactttcccaaattaaatggcacc 42545611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 47199395 - 47199444
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||| ||||||||||| || |||| |||||||||||||||| |||||    
T  47199395 actttcctatggtgggaaagaagtctcttttcccaaattaaatgccacct 47199444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 48013365 - 48013316
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  48013365 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 48013316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 55160067 - 55160115
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||||||||||| ||||||  ||||||||||||||||||||| |||||    
T  55160067 actttcccatggtgagaaaaag-tctcctttcccaaattaaatgccacct 55160115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 11681275 - 11681323
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||||||||||||||||||||   |||| |||||||||||| |||||    
T  11681275 ctttcccatggtgggaaaaaactagtcttttccaaattaaatgccacct 11681323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 11689554 - 11689602
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||||||||||||||||||||   |||| |||||||||||| |||||    
T  11689554 ctttcccatggtgggaaaaaactagtcttttccaaattaaatgccacct 11689602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 23865321 - 23865365
Alignment:
Q  66 tcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||||||| || ||||||||| ||||||||| ||||||    
T  23865321 tcccatggtgggaaacaagtctcctttcacaaattaaacggcacc 23865365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 52758709 - 52758757
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 109  Q
    |||||||||||| || |||||||||  | ||||||||||||||||||||    
T  52758709 aactttcccatgatgagaaaaaactagcatttcccaaattaaatggcac 52758757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 7e-44; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 14573363 - 14573261
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggc 107  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14573363 gttgagagagtatgataaaaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggc 14573264  T
Q  108 acc 110  Q
    |||    
T  14573263 acc 14573261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 37548107 - 37547997
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||    
T  37548107 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttcccaaatt 37548008  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  37548007 aaatggcacct 37547997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 21471893 - 21472002
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||    
T  21471893 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggatatgatcaactttcccatggtgggaaagaactctcctttcccaaatt 21471992  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  21471993 aaatggcacc 21472002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 21471126 - 21471016
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||| ||||||||||||||| |||| | ||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  21471126 tctagtggctgagagagtatgataggaatatgttcttcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaatt 21471027  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  21471026 aaatggcacct 21471016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 38834496 - 38834385
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||| ||| | ||||||||||||||||||| ||||||||||||||||| ||||||||||  || |||||||||||||||    
T  38834496 tctagtggttgagagagtatgataaaaatatgttcctcatttaatctaatggacatgatcaactttcccgtggtgggaaagtaccctcctttcccaaatt 38834397  T
Q  101 aaatggcacctc 112  Q
    ||||||||||||    
T  38834396 aaatggcacctc 38834385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 38834575 - 38834685
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||  ||| | ||| ||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  38834575 tctagtggttgagagagtatgatagaaatatgttcttcatttaatctaatggacatgatcaactttcccacggtaggaaaaaactctcctttcccaaatt 38834674  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  38834675 aaatggcacct 38834685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 4479651 - 4479750
Alignment:
Q  11 gagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  4479651 gagagagtatgataagaatatgttcctcatttaatctaatggacatgattaactttcccatggtgagaaagaactctcctttcccaaattaaatggcacc 4479750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 14573938 - 14574048
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | || |||||||||||||||| | |||||||||||||  ||||||||||| |||||||||||||||||||    
T  14573938 tctagtggttgagagagtatgataggaatatgtttctcatttaatctaatggatatgatcaactttcttatggtgggaaagaactctcctttcccaaatt 14574037  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  14574038 aaatggcacct 14574048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 13134427 - 13134318
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||| |||||||||||  ||| | ||||||||||||| ||||| |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  13134427 tctagtggttgatagagtatgatagaaatatgttcctcatttaatttaatggacatgatcaactttcctatggtgggaaagaactctcctttcccaaatt 13134328  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  13134327 aaatggcacc 13134318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 33433160 - 33433208
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  33433160 actttcccatggtgggaaagaactctcctttctcaaattaaacggcacc 33433208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 30486909 - 30486964
Alignment:
Q  30 gtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaact 85  Q
    |||||| |||||| ||| |||| |||| ||||||||||||||||||||||||||||    
T  30486909 gtattcttcatttgatccaatgcacataatcaactttcccatggtgggaaaaaact 30486964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 5276513 - 5276463
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 112  Q
    ||||||||||||||||||| || ||||||||||||| ||||||| ||||||    
T  5276513 actttcccatggtgggaaagaagtctcctttcccaagttaaatgccacctc 5276463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 111
Target Start/End: Original strand, 1164788 - 1164825
Alignment:
Q  74 tgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  1164788 tgggaaagaactctcctttcccaaattaaatggcacct 1164825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 16426602 - 16426553
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||| |||||||||||||||||   |||||||||||||||||||||||    
T  16426602 aacttttccatggtgggaaaaaacaagcctttcccaaattaaatggcacc 16426553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 40992271 - 40992222
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||||||||| |||||||||   |||||||||||||||||||||||    
T  40992271 aactttcccatggtaggaaaaaacaaacctttcccaaattaaatggcacc 40992222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 41984774 - 41984726
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||||| |||||||||  |||||||||||||||||| |||||    
T  41984774 ctttcccatggtgagaaaaaactagcctttcccaaattaaatgccacct 41984726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 2650278 - 2650227
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 112  Q
    |||||| ||||| |||||||||| |||| |||||||||||||| ||||||||    
T  2650278 aacttttccatgatgggaaaaaagtctcatttcccaaattaaacggcacctc 2650227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 24727870 - 24727820
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||| ||||| |||||||||| | | |||||||||||||||||||||||    
T  24727870 aacttttccatgatgggaaaaaagtgtgctttcccaaattaaatggcacct 24727820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 24741811 - 24741853
Alignment:
Q  68 ccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||    
T  24741811 ccatggtgggaaaaaagtcttctttcccaaattaaacggcacc 24741853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 30545434 - 30545484
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||||||||  ||||||| ||||  ||||||||||||||||||||||||    
T  30545434 aactttcccatcatgggaaacaacttccctttcccaaattaaatggcacct 30545484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 4478899 - 4478850
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  4478899 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 4478850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 19521917 - 19521966
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  19521917 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 19521966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 41043329 - 41043378
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 112  Q
    |||| ||||| ||||||||||||  |||||||||||||||||| ||||||    
T  41043329 cttttccatgatgggaaaaaactagcctttcccaaattaaatgccacctc 41043378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 30544779 - 30544727
Alignment:
Q  58 atcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||||||  ||||||| ||||  | |||||||||||||||||||||    
T  30544779 atcaactttcccatcatgggaaacaacttccatttcccaaattaaatggcacc 30544727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 3e-43; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 17145731 - 17145622
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  17145731 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaatt 17145632  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  17145631 aaatggcacc 17145622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38072230 - 38072339
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  38072230 tctagtggttgagagagtatgataagaatgtattcatcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcatttcccaaatt 38072329  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  38072330 aaatggcacc 38072339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 7677755 - 7677855
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggc 107  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7677755 gttgagagaatatgataagaatgtgttcctcatttaatctaatgaacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggc 7677854  T
Q  108 a 108  Q
    |    
T  7677855 a 7677855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 38779509 - 38779611
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggc 107  Q
    ||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  38779509 gttgagagagtattataagaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggc 38779608  T
Q  108 acc 110  Q
    |||    
T  38779609 acc 38779611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 4261314 - 4261209
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||| ||||||||||||| |||||    
T  4261314 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtagaaaagaactctcctttcctaaatt 4261215  T
Q  101 aaatgg 106  Q
    ||||||    
T  4261214 aaatgg 4261209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 38072007 - 38071897
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  38072007 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttcctaaatt 38071908  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  38071907 aaatggcacct 38071897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 38778963 - 38778853
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| |  |||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||    
T  38778963 tctagtggttgagagagtatgataggaatatgctcctcatttaatctaatggatatgatcaactttcccatggtgggaaagaactctcctttcccaaatt 38778864  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  38778863 aaatggcacct 38778853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 668284 - 668179
Alignment:
Q  5 gtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaat 104  Q
    |||||||||||||||||||| |||| | ||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  668284 gtggttgagagagtatgataggaatatgttcttcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaat 668185  T
Q  105 ggcacc 110  Q
    ||||||    
T  668184 ggcacc 668179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 37864246 - 37864356
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | || |||||||||||||||| |||||||||||||||||||||||||||| ||||||  |||||||||||    
T  37864246 tctagtggttgagagagtatgataggaatatgtttctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactcttatttcccaaatt 37864345  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  37864346 aaatggcacct 37864356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 669042 - 669151
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | |||||||||| |||||||| | |||||||||||||| ||||||||||||||||||| |||||||||||    
T  669042 tctagtggttgagagagtatgataggaatatgttcctcatttgatctaatggatatgatcaactttcctatggtgggaaaaaactctcatttcccaaatt 669141  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  669142 aaatggcacc 669151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 4261535 - 4261645
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||| |||||||||||||||||||  ||| | ||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||    
T  4261535 tctaatggttgagagagtatgatagaaatatgttcctcatttaatctaatggagatgatcaactttcccatggtgggaaagaactctcctttcctaaatt 4261634  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  4261635 aaatggcacct 4261645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 37468972 - 37469053
Alignment:
Q  29 tgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37468972 tgtattcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 37469053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 7677524 - 7677421
Alignment:
Q  3 tagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaa 102  Q
    ||||||||||||||||||||||  ||| | ||||||||||||||||||| ||||||||||||||  |||||||||||| || ||||||||||||||||||    
T  7677524 tagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttttcatggtgggaaagaattctcctttcccaaattaa 7677425  T
Q  103 atgg 106  Q
    ||||    
T  7677424 atgg 7677421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17145811 - 17145920
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||  ||||||||||||||| ||||||||||||||||||| ||   ||| |||||||||||||||||||    
T  17145811 tctagtggttgagagagtatgataggaatatgttattcatttaatctaatggacatgatcaactttcccatagtaaaaaagaactctcctttcccaaatt 17145910  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  17145911 aaatggcacc 17145920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 41194608 - 41194512
Alignment:
Q  14 agagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||||||||||||| | ||||||||| ||| ||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41194608 agagtatgataagaatatgttcctcatt-aatttaatggacatgattaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 41194512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 53 - 111
Target Start/End: Complemental strand, 37468967 - 37468909
Alignment:
Q  53 acatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37468967 acatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 37468909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 24322299 - 24322399
Alignment:
Q  10 tgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 109  Q
    |||||||||||||||| ||||| |||||||||| |||||| |  ||  |  | |||||||||||||||| ||||||  ||||||||||||||||||||||    
T  24322299 tgagagagtatgataaaaatgtgttcctcatttgatctaacggtcaaaaaaacctttcccatggtgggataaaactaacctttcccaaattaaatggcac 24322398  T
Q  110 c 110  Q
    |    
T  24322399 c 24322399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 44909309 - 44909409
Alignment:
Q  12 agagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||||||||| | |||||||||||||||| ||| || |  ||  |  | |||||||||||||||||||||||  |||||||||||||||| |||||||    
T  44909309 agagagtatgattaaaatgtattcctcatttgatccaacggccaaaaaaacctttcccatggtgggaaaaaacttacctttcccaaattaaacggcacct 44909408  T
Q  112 c 112  Q
    |    
T  44909409 c 44909409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 29006396 - 29006346
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  29006396 aactttcccatggtgggaaaaaacaagcctttcccaaattaaatggcacct 29006346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 20890247 - 20890206
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaa 103  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  20890247 actttcccatggtgggaaaaaactgtcctttcccaaattaaa 20890206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 45887981 - 45888029
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||    
T  45887981 ctttcccatggtgggaaaaaactagcctttcccaaattaaatgccacct 45888029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 47331954 - 47332002
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||    
T  47331954 ctttcccatggtgggaaaaaactagcctttcccaaattaaatgtcacct 47332002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 29007198 - 29007248
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||||||||||||||||   |||||||||||||||||| |||||    
T  29007198 aactttcccatggtgggaaaaaacaagcctttcccaaattaaatgacacct 29007248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 41224842 - 41224892
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||||||||||||||||||||    ||||||||||||||||||||||||    
T  41224842 aactttcccatggtgggaaaaaataagcctttcccaaattaaatggcacct 41224892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 40257759 - 40257836
Alignment:
Q  19 atgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttccca 96  Q
    ||||||||||||| || ||||||| |||||||| |||  | |||||||| |||||||||||| ||||| | |||||||    
T  40257759 atgataagaatgtgtttctcatttgatctaatggacaaaaacaactttctcatggtgggaaacaactcccatttccca 40257836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 42607172 - 42607095
Alignment:
Q  19 atgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttccca 96  Q
    ||||||||| ||| || ||||||| |||||||| |||  | ||||||||||||||||||||| || || |||||||||    
T  42607172 atgataagattgtgtttctcatttgatctaatggacaaaaacaactttcccatggtgggaaacaattcccctttccca 42607095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 4985395 - 4985443
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||||||||||||||||||||  | |||||||||||||||| |||||    
T  4985395 ctttcccatggtgggaaaaaactagcatttcccaaattaaatgtcacct 4985443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 4989493 - 4989541
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||||||||||||||||||||  | |||||||||||||||| |||||    
T  4989493 ctttcccatggtgggaaaaaactagcatttcccaaattaaatgtcacct 4989541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 27599303 - 27599211
Alignment:
Q  18 tatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||||||||| ||| | | |||||||||||  ||   | |||||||||||||||||||| ||||| |||||||||  ||||||| ||||    
T  27599303 tatgataagaatgtgttcattacttaatctaatggtcaaatttaactttcccatggtgggaaacaactcccctttcccattttaaatgccacc 27599211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 29314630 - 29314578
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctcc 113  Q
    |||||||||||||||| |||||||   |||||| |||||||||||||||||||    
T  29314630 aactttcccatggtggaaaaaaacaagcctttctcaaattaaatggcacctcc 29314578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 45887326 - 45887286
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaa 103  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  45887326 ctttcccatggtgggaaaaaactagcctttcccaaattaaa 45887286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 29315257 - 29315360
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggc 107  Q
    |||||| ||||||||||||| ||||||| |||||  ||||||||   |  |   ||||||||||| ||||||||||||   |||||||||||||||| ||    
T  29315257 gttgagggagtatgataagagtgtattcttcattagatctaatggttaaaacttactttcccatgatgggaaaaaactagtctttcccaaattaaattgc 29315356  T
Q  108 acct 111  Q
    ||||    
T  29315357 acct 29315360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 41533943 - 41533896
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||||||||| ||||||||  |||||||||||||||| ||||||    
T  41533943 ctttcccatggtggaaaaaaacttacctttcccaaattaaacggcacc 41533896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 27600041 - 27600143
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggc 107  Q
    ||||||||  |||||||||||||| ||| | | |||||||| ||  ||   | |||||||||||||||||||| ||||| |||||||||  ||||||| |    
T  27600041 gttgagagtctatgataagaatgtgttcattacttaatctagtggtcaaatttaactttcccatggtgggaaacaactcccctttcccattttaaatgcc 27600140  T
Q  108 acc 110  Q
    |||    
T  27600141 acc 27600143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 32859335 - 32859257
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactc 86  Q
    ||||||||||||  |||||||||| |||| |||||||||||||| | |  |||||||||||| || ||  |||||||||    
T  32859335 gttgagagagtagtataagaatgtgttccacatttaatctaatgcatactatcaactttcccgtgatgaaaaaaaactc 32859257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 668420 - 668453
Alignment:
Q  76 ggaaaaaactctcctttcccaaattaaatggcac 109  Q
    ||||| ||||||||||||||||||||||||||||    
T  668420 ggaaagaactctcctttcccaaattaaatggcac 668453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 44896095 - 44896046
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||||||||| |||||||   ||||||||||||||| ||||||    
T  44896095 aactttcccatggtggggaaaaactagtctttcccaaattaaacggcacc 44896046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 48259820 - 48259861
Alignment:
Q  64 tttcccatggtgggaaaaaactctcctttcccaaattaaatg 105  Q
    ||||||||||||||||||||||  | ||||||||||||||||    
T  48259820 tttcccatggtgggaaaaaactaacatttcccaaattaaatg 48259861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 24321472 - 24321424
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||| ||| ||||| ||||||  ||||||||||||||||||||||||    
T  24321472 ctttcctatgatgggataaaactaacctttcccaaattaaatggcacct 24321424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 24322469 - 24322429
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaa 103  Q
    |||||||||| |||||||||| | |||||||||||||||||    
T  24322469 ctttcccatgatgggaaaaaagtttcctttcccaaattaaa 24322429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 3e-43; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 15183956 - 15184065
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  15183956 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaatt 15184055  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  15184056 aaatggcacc 15184065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 8204229 - 8204119
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||| ||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  8204229 tctagtggttgagatagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaatt 8204130  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  8204129 aaatggcacct 8204119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 33002755 - 33002865
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  33002755 tctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaatt 33002854  T
Q  101 aaatggcacct 111  Q
    ||||| |||||    
T  33002855 aaatgacacct 33002865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 686525 - 686417
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    |||||||||||||||| ||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  686525 tctagtggttgagagaatatgataggaatatattcctcatttaatctaatggacatgatcaactttcccatggtggga-aaaactctcctttcccaaatt 686427  T
Q  101 aaatggcacc 110  Q
    ||||||||||    
T  686426 aaatggcacc 686417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 8040302 - 8040194
Alignment:
Q  3 tagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaa 102  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| | ||||||| |||| ||||||||||||||||    
T  8040302 tagtggttgagagagtatgataagaatatattcctcatttaatctaatggacatgatcaactttcccacgatgggaaagaactgtcctttcccaaattaa 8040203  T
Q  103 atggcacct 111  Q
    |||||||||    
T  8040202 atggcacct 8040194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 33002034 - 33001931
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggc 107  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||     
T  33002034 gttgagagaatatgataagaatgtattcctcatttaatctaatggacatgatcaacttttccatggtgggaaagaactctcctttcccaaattaaatggt 33001935  T
Q  108 acct 111  Q
    ||||    
T  33001934 acct 33001931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 36626569 - 36626679
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||| ||| | |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  36626569 tctagtggttgagagagtatgataagaatatattccttatttaatataacggacatgatcaactttcccatggtgggaaagaactctcatttcccaaatt 36626668  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  36626669 aaatggcacct 36626679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 12190105 - 12190207
Alignment:
Q  9 ttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 108  Q
    ||||||||||||||||  ||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12190105 ttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcttttcccaaattaaatggca 12190204  T
Q  109 cct 111  Q
    |||    
T  12190205 cct 12190207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 15183198 - 15183088
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaa-aaactctcctttcccaaat 99  Q
    ||||||||||||||||||||||||  ||| | ||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||||||||||||||    
T  15183198 tctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttctcatgatgggaaataaactctcctttcccaaat 15183099  T
Q  100 taaatggcacc 110  Q
    |||||||||||    
T  15183098 taaatggcacc 15183088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 687289 - 687395
Alignment:
Q  3 tagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaa 102  Q
    ||||| |||||||||||||||| |||| | ||||||||||||||||||| |||| ||||||||| |||| |||| ||| |||||||||||||||||||||    
T  687289 tagtgattgagagagtatgataggaatatgttcctcatttaatctaatggacataatcaacttttccatagtggaaaagaactctcctttcccaaattaa 687388  T
Q  103 atggcac 109  Q
    |||||||    
T  687389 atggcac 687395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 8040383 - 8040493
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||  ||| | ||||  ||||||||||||| ||||||| |||||||||| ||||||||| || | ||||||||||||||    
T  8040383 tctagtggttgagagagtatgatagaaatatgttccctatttaatctaatggacatgattaactttcccacggtgggaaagaaatttcctttcccaaatt 8040482  T
Q  101 aaatggcacct 111  Q
    |||||||||||    
T  8040483 aaatggcacct 8040493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 33283971 - 33284072
Alignment:
Q  10 tgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 109  Q
    |||||||||||||||| ||||| |||||||||| |||||| |  ||  |  | |||||||||||||||| ||||||  ||||||||||||||||||||||    
T  33283971 tgagagagtatgataaaaatgtgttcctcatttgatctaacggtcaaaaaaacctttcccatggtgggataaaactaacctttcccaaattaaatggcac 33284070  T
Q  110 ct 111  Q
    ||    
T  33284071 ct 33284072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 39950451 - 39950404
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  39950451 ctttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 39950404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 33283265 - 33283169
Alignment:
Q  10 tgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatgg 106  Q
    |||||||||||||||| ||||| |||||||||| ||||||||  ||  |  | |||||||||| ||||| ||||||  |||||||||||||||||||    
T  33283265 tgagagagtatgataaaaatgtgttcctcatttgatctaatggtcaaaaaaacctttcccatgatgggataaaactaacctttcccaaattaaatgg 33283169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 2319313 - 2319266
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||    
T  2319313 ctttcccatggtgggaaaaaactagcctttcccaaattaaatgccacc 2319266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 4607513 - 4607470
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaat 104  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||    
T  4607513 aactttcccatggtgggaaaaaagtctactttcccaaattaaat 4607470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 16970979 - 16971081
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggc 107  Q
    |||||| ||||||||||||| ||||||| |||||  ||||||||   |  |   ||||||||||| ||||||||||||   |||||||||||||||||||    
T  16970979 gttgagggagtatgataagagtgtattcttcattagatctaatggttaaaacttactttcccatgatgggaaaaaactagtctttcccaaattaaatggc 16971078  T
Q  108 acc 110  Q
    |||    
T  16971079 acc 16971081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 4608589 - 4608638
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||||||||||||||| |||  |||||||||| |||||||||||||    
T  4608589 aactttcccatggtgggaaataacattcctttcccagattaaatggcacc 4608638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 13654981 - 13654932
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||| ||||||||||| || ||||||||||||||||||||| |||||    
T  13654981 actttcctatggtgggaaagaagtctcctttcccaaattaaatgtcacct 13654932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 2319968 - 2320016
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||| ||||||||||||||||  |||||||||||||||||| |||||    
T  2319968 ctttcctatggtgggaaaaaactagcctttcccaaattaaatgccacct 2320016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 26268391 - 26268343
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||||||||||||||||||||  | |||||||||||||||| |||||    
T  26268391 ctttcccatggtgggaaaaaactaacatttcccaaattaaatgccacct 26268343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 33685824 - 33685772
Alignment:
Q  31 tattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaa 83  Q
    ||||| ||||||||||||||| |||| |||||||||  |||||||||||||||    
T  33685824 tattcttcatttaatctaatggacataatcaacttttacatggtgggaaaaaa 33685772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 39950444 - 39950480
Alignment:
Q  74 tgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||| |||||||||||||||||||||||||||||    
T  39950444 tgggaaagaactctcctttcccaaattaaatggcacc 39950480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 13404701 - 13404752
Alignment:
Q  60 caactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||||||||||||||||||||||   ||| ||||||||||||||| |||||    
T  13404701 caactttcccatggtgggaaaaaagagtccgttcccaaattaaatgccacct 13404752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 26269022 - 26269069
Alignment:
Q  63 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||||| ||||||||||||  |||||||||||||||||| ||||    
T  26269022 ctttcccatgatgggaaaaaactaacctttcccaaattaaatgccacc 26269069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 110
Target Start/End: Original strand, 686667 - 686701
Alignment:
Q  76 ggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||| |||||||||||||||||||||||||||||    
T  686667 ggaaagaactctcctttcccaaattaaatggcacc 686701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 2458353 - 2458403
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    |||||| ||||||||| |||||| |||| |||||||||||||| |||||||    
T  2458353 aacttttccatggtggaaaaaaagtctcatttcccaaattaaacggcacct 2458403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 8226690 - 8226641
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 111  Q
    ||||| |||||| ||||||||| ||| ||||| |||||||||||||||||    
T  8226690 acttttccatggagggaaaaaattcttctttctcaaattaaatggcacct 8226641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 31148444 - 31148493
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    |||||||||||| |||||||||| | | ||||||||||||||| ||||||    
T  31148444 aactttcccatgatgggaaaaaagtgtgctttcccaaattaaacggcacc 31148493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 39167442 - 39167483
Alignment:
Q  64 tttcccatggtgggaaaaaactctcctttcccaaattaaatg 105  Q
    ||||||||| ||||||| || |||||||||||||||||||||    
T  39167442 tttcccatgatgggaaagaagtctcctttcccaaattaaatg 39167483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 26688214 - 26688166
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||    
T  26688214 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 26688166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 26957945 - 26957897
Alignment:
Q  62 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||    
T  26957945 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 26957897  T

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Target: scaffold0041 (Bit Score: 87; Significance: 2e-41; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 27323 - 27221
Alignment:
Q  8 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggc 107  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  27323 gttgagagagtatgataagaatgtgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttcccaaattaaatggc 27224  T
Q  108 acc 110  Q
    |||    
T  27223 acc 27221  T

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Target: scaffold0041; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 27546 - 27623
Alignment:
Q  33 ttcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27546 ttcctcatttaatctaatggatatgatcaactttcccatggtgggaaaaaactctccttttccaaattaaatggcacc 27623  T

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Target: scaffold0332 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 9197 - 9306
Alignment:
Q  1 tctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaatt 100  Q
    ||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||||||| |||||| ||||||||  ||||||||||||||| |||||||    
T  9197 tctagtggttgagagagtatgataagaatatgttcatcatttaatctaatggacatgatgaacttttccatggtgaaaaaaaactctccttttccaaatt 9296  T
Q  101 aaatggcacc 110  Q
    ||||| ||||    
T  9297 aaatgacacc 9306  T

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Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 17388 - 17339
Alignment:
Q  61 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 110  Q
    ||||||||||||||||||||||||   ||||| |||||||||||||||||    
T  17388 aactttcccatggtgggaaaaaacaagccttttccaaattaaatggcacc 17339  T

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Target: scaffold0700 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 5415 - 5344
Alignment:
Q  14 agagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaact 85  Q
    |||||| ||||||||||| || |||||||||||||||| | || ||| ||||||| || |||||| ||||||    
T  5415 agagtaggataagaatgtgtttctcatttaatctaatggatataatctactttcctatagtgggagaaaact 5344  T

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