View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20222_high_2 (Length: 841)
Name: NF20222_high_2
Description: NF20222
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20222_high_2 |
 | |
|
| [»] scaffold0425 (1 HSPs) |
| | |
|
| [»] scaffold1643 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 615; Significance: 0; HSPs: 60)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 615; E-Value: 0
Query Start/End: Original strand, 12 - 794
Target Start/End: Original strand, 6555367 - 6556149
Alignment:
| Q |
12 |
aagaatatgggaaagctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatc |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6555367 |
aagaatatgggaaagctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatc |
6555466 |
T |
|
| Q |
112 |
ttcatggaacaattcatattaaagggttgggtaatgtcagtgatactgcagatgctgccacattaaatttgaaagatatagaagaattacatactgagtt |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6555467 |
ttcatggaacaattcatattaaagggttgggtaatgtcagtgatactgcagatgctgccacattaaatttgaaagatatagaagaattacatactgagtt |
6555566 |
T |
|
| Q |
212 |
caatggcggacgagaagaaatggctgaaagtaacctgttagttttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaa |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6555567 |
caatggcggacgagaagaaatggctgaaagtaacctgttggttttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaa |
6555666 |
T |
|
| Q |
312 |
ggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttg |
411 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6555667 |
ggtagtagatttccaaattggctaaggggttgtcatttacccaacttagtatctcttgaacttaagggttgtaagttatgttcctgtttgccaacacttg |
6555766 |
T |
|
| Q |
412 |
gacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccatt |
511 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
6555767 |
gacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagagttttatggcaataattcaacaattgttccatt |
6555866 |
T |
|
| Q |
512 |
caagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatgtgtaaggtttcctctgcttaaagagctttatatagaaaattgt |
611 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6555867 |
caagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatgtgtaaggtttcctctgcttaaagagctttatatagaaaattgt |
6555966 |
T |
|
| Q |
612 |
cctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggaggaatggttatgtcttgaagggt |
711 |
Q |
| |
|
|||||||||||||| || |||||||||||||| ||||||||||| ||| || | || |||||| |||||||||||| ||||| |||| || || |
|
|
| T |
6555967 |
cctaaattgaaaagagtattgcctcaacatcttccatctttacaaaatttgtggatcaatgattgcaacatgttggaggaatgtttatgccttggagagt |
6556066 |
T |
|
| Q |
712 |
ttctttctcttaaagagctttatataagtgattgttccaaattcaaaagagtattgcctcaacatcttccatctttacaaaaa |
794 |
Q |
| |
|
||| || ||||||||| ||| ||||| ||||| || |||| ||||| | | |||||||| ||||| |||||||||||| |
|
|
| T |
6556067 |
ttcctttgcttaaagagtttttaataagaaattgtcccgaattgaaaagggctcttcctcaacaccttccttctttacaaaaa |
6556149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 580; E-Value: 0
Query Start/End: Original strand, 16 - 825
Target Start/End: Complemental strand, 6735065 - 6734244
Alignment:
| Q |
16 |
atatgggaaagctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatcttca |
115 |
Q |
| |
|
|||||||||||||||| |||||||| | | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6735065 |
atatgggaaagctaaacaatcttcaaagcctatcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccagcttca |
6734966 |
T |
|
| Q |
116 |
tggaacaattcatattaaagggttgggtaatgtcagtgatactgcagatgctgccacattaaatttgaaagata---------tagaagaattacatact |
206 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||| | |
|
|
| T |
6734965 |
tggaacaattcatattaaagggctgggtaatgtcagtgatcctgcagatgctgccacatcaaatttgaaagataagaagtatttagaagaattacaaatg |
6734866 |
T |
|
| Q |
207 |
gagttcaatggcggacgagaagaaatggctgaaagtaacctgttagttttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacact |
306 |
Q |
| |
|
||||||||||||||| |||||||||||| |||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
6734865 |
gagttcaatggcggaagagaagaaatggatgaaagaagtgtgttagtcttggaggctctaaaaccaaatagcaacttgaagaagctcaacatcacacact |
6734766 |
T |
|
| Q |
307 |
acaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaac |
406 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | || ||||||| ||||||||||||||||| |
|
|
| T |
6734765 |
acaaaggtagtagatttccaaattggctaaggggtagtcatttacgcaacttagtatctcttgaactgaatggttgtag---atgttcctgtttgccaat |
6734669 |
T |
|
| Q |
407 |
acttggacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgtt |
506 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
6734668 |
acttggacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagagttttatggcaataattcaacaattgtt |
6734569 |
T |
|
| Q |
507 |
ccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatgtgtaaggtttcctctgcttaaagagctttatatagaaa |
606 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||| || |
|
|
| T |
6734568 |
ccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatgtgtaaggtttcctttgcttatagagctttctataacaa |
6734469 |
T |
|
| Q |
607 |
attgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggaggaatggttatgtcttga |
706 |
Q |
| |
|
||||||||||| ||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6734468 |
attgtcctaaactgaaaggcaccctgcctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggaggaatggttatgtcttga |
6734369 |
T |
|
| Q |
707 |
agggtttctttctcttaaagagctttatataagtgattgttccaaattcaaaagagtattgcctca---------acatcttccatctttacaaaaattg |
797 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
6734368 |
agggtttctttctcttaaagagctttatataagtcattgttccaaattcaaaagagtattgcctcaacttcttccacatcttccatctttacaaaaattg |
6734269 |
T |
|
| Q |
798 |
tgtattatcaatgattgcaacatgttgg |
825 |
Q |
| |
|
| |||||||||||||||||||||| |
|
|
| T |
6734268 |
cg---gatcaatgattgcaacatgttgg |
6734244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 538; E-Value: 0
Query Start/End: Original strand, 12 - 737
Target Start/End: Original strand, 6521061 - 6521780
Alignment:
| Q |
12 |
aagaatatgggaaagctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatc |
111 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6521061 |
aagaatatgggaaagctaagtaatcttcagaccctgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatc |
6521160 |
T |
|
| Q |
112 |
ttcatggaacaattcatattaaagggttgggtaatgtcagtgatactgcagatgctgccacattaaatttgaaagatatagaagaattacatactgagtt |
211 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6521161 |
ttcatggaacaattcatattaaagggttgggtaatgttagtgatactgcagatgctgccacattaaatttgaaagatatagaagaattacatacagagtt |
6521260 |
T |
|
| Q |
212 |
caatggcggacgagaagaaatggctgaaagtaacctgttagttttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaa |
311 |
Q |
| |
|
|||||||||| ||||||||||||||||||| ||||||||||| ||||||||| || || |||||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
6521261 |
caatggcggaagagaagaaatggctgaaagcaacctgttagtcttggaggctatacaatcaaatagcaacttgaagaagctcaacatcacacgctacaaa |
6521360 |
T |
|
| Q |
312 |
ggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttg |
411 |
Q |
| |
|
|||||||||||||||||||||| | | | |||||||||||||||||||||||||| || | |||| ||||| ||||||||||||||||||||||| |
|
|
| T |
6521361 |
ggtagtagatttccaaattggc---gtgattgtcatttacccaacttagtatctcttcaactgaaggattgtag---atgttcctgtttgccaacacttg |
6521454 |
T |
|
| Q |
412 |
gacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccatt |
511 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6521455 |
gacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccatt |
6521554 |
T |
|
| Q |
512 |
caagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatgtgtaaggtttcctctgcttaaagagctttatatagaaaattgt |
611 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
6521555 |
caagtcccttcaatatttgagatttcaggatatggtcaactgggaggaatggatatgtgtaaggtttcctctgcttaaagagctttatataaaaaattgt |
6521654 |
T |
|
| Q |
612 |
cctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggaggaatggttatgtcttgaagggt |
711 |
Q |
| |
|
|||||||||||||||||| | |||||||| ||| ||||||||||||||||||| || |||| |||||| ||||||||||||| |||||| |||| || || |
|
|
| T |
6521655 |
cctaaattgaaaagcaccctgcctcaacacctttcttctttacaaaaattgaagatcagtgattgcaacgagttggaggaattgttatgccttggagagt |
6521754 |
T |
|
| Q |
712 |
ttctttctcttaaagagctttatata |
737 |
Q |
| |
|
||| || ||||||||| ||| |||| |
|
|
| T |
6521755 |
ttcctttgcttaaagagatttctata |
6521780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 523; E-Value: 0
Query Start/End: Original strand, 12 - 794
Target Start/End: Original strand, 6527801 - 6528583
Alignment:
| Q |
12 |
aagaatatgggaaagctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatc |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6527801 |
aagaatatgggaaagctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatc |
6527900 |
T |
|
| Q |
112 |
ttcatggaacaattcatattaaagggttgggtaatgtcagtgatactgcagatgctgccacattaaatttgaaagatatagaagaattacatactgagtt |
211 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
6527901 |
ttcatggaacaattcatattaaaggcttgggtaatgtcagtgatactgcagatgctgccccattaaatttgaaagatatagaagaattgcatactgagtt |
6528000 |
T |
|
| Q |
212 |
caatggcggacgagaagaaatggctgaaagtaacctgttagttttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaa |
311 |
Q |
| |
|
|||||||||| ||||||||||||||||||| ||||||||||| ||||||||| || ||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
6528001 |
caatggcggaagagaagaaatggctgaaagcaacctgttagtcttggaggctatacaaccaaatagcaacttgaagaagctcaacatcacacactacaaa |
6528100 |
T |
|
| Q |
312 |
ggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttg |
411 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | || |||||| ||||||||||||||||||| | |||| |
|
|
| T |
6528101 |
ggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttcaactgaatggttgtgggttatgttcctgtttgccaccccttg |
6528200 |
T |
|
| Q |
412 |
gacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccatt |
511 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
6528201 |
gacaactcccttctcttaagaaactttccgtttatgattgtgaaggaataaagatcattgatgaagatttttatgacaataattcaacaattgttccatt |
6528300 |
T |
|
| Q |
512 |
caagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatgtgtaaggtttcctctgcttaaagagctttatatagaaaattgt |
611 |
Q |
| |
|
|||||||||| ||| || || ||||||| ||||||| ||||||||| ||||||||||| ||||||||||| ||||||||||||||| |||| ||||||| |
|
|
| T |
6528301 |
caagtcccttcaattttcgatatttgagaatatggtgaactgggagaaatggatatgtctaaggtttcctttgcttaaagagctttctataagaaattgt |
6528400 |
T |
|
| Q |
612 |
cctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggaggaatggttatgtcttgaagggt |
711 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||||||||||||||| || | | |||||| ||||||||||||||||||| |||| || || |
|
|
| T |
6528401 |
cctaaattgaaaagcaccttgcctcaacagcttccttctttacaaaaattgtgcataaataattgcaacaagttggaggaatggttatgccttggagagt |
6528500 |
T |
|
| Q |
712 |
ttctttctcttaaagagctttatataagtgattgttccaaattcaaaagagtattgcctcaacatcttccatctttacaaaaa |
794 |
Q |
| |
|
||| || ||||||||| ||| ||||| |||| || |||| ||||| | |||||||||| ||||| |||||||||||| |
|
|
| T |
6528501 |
ttcctttgcttaaagagatttctataacaagttgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaa |
6528583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 505 - 825
Target Start/End: Original strand, 6781093 - 6781419
Alignment:
| Q |
505 |
ttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatgtgtaaggtttcctctgcttaaagagctttatataga |
604 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||| |
|
|
| T |
6781093 |
ttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatgtgtaaggtttcctttgcttatagagctttctataac |
6781192 |
T |
|
| Q |
605 |
aaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggaggaatggttatgtctt |
704 |
Q |
| |
|
||||||||||||| ||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6781193 |
aaattgtcctaaactgaaaggcaccctgcctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggaggaatggttatgtctt |
6781292 |
T |
|
| Q |
705 |
gaagggtttctttctcttaaagagctttatataagtgattgttccaaattcaaaagagtattgcctca---------acatcttccatctttacaaaaat |
795 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
6781293 |
gaagggtttctttctcttaaagagctttatataagtcattgttccaaattcaaaagagtattgcctcaacttcttccacatcttccatctttacaaaaat |
6781392 |
T |
|
| Q |
796 |
tgtgtattatcaatgattgcaacatgttgg |
825 |
Q |
| |
|
|| | |||||||||||||||||||||| |
|
|
| T |
6781393 |
tgcg---gatcaatgattgcaacatgttgg |
6781419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 20 - 662
Target Start/End: Complemental strand, 8453761 - 8453095
Alignment:
| Q |
20 |
gggaaagctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatcttcatgga |
119 |
Q |
| |
|
|||||||||||| |||||||| | ||||||||||||||||||||||| || |||| ||||||||| ||||| ||||||||||| ||||||||||||||| |
|
|
| T |
8453761 |
gggaaagctaaacaatcttcaaagcttgtcatattttattgtggaagagcagaatgtatctgatcttaaagagttggcaaaactaaaccatcttcatgga |
8453662 |
T |
|
| Q |
120 |
acaattcatattaaagggttgggtaatgtcagtgatactgcagatgctgccacattaaatttgaaagata---------tagaagaattacatactgagt |
210 |
Q |
| |
|
||||| ||||| |||||||||||||||| || ||| ||||||| |||| || ||||||||||||||| ||||||||||||||| ||| |
|
|
| T |
8453661 |
gcaattgatattgaagggttgggtaatgttagcgatcttgcagattctgctactgtaaatttgaaagatacgaaatatttagaagaattacatatgaagt |
8453562 |
T |
|
| Q |
211 |
tcaatggcggacgagaaga------------aatggctgaaagtaacctgttagttttggaggctctaaaaccaaatagcaacttgaagaagctcaacat |
298 |
Q |
| |
|
| |||||||| ||||||| |||||||||||| || ||| ||| ||||||||||| |||||||||| |||||||||| ||| | ||| |
|
|
| T |
8453561 |
ttgatggcggaagagaagaaatggatgagtcaatggctgaaagcaatgtgtcagtcttggaggctctccaaccaaatagaaacttgaagaggcttaccat |
8453462 |
T |
|
| Q |
299 |
tacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaattta-agggttgtaagttatgttcctg |
397 |
Q |
| |
|
|| | |||||||||| ||| |||||||||||| |||||||| ||||||||| ||||||||||||||| ||| || || |||| |||||||| | |
|
|
| T |
8453461 |
ctcaaaatacaaaggtaatagctttccaaattggataaggggttatcatttaccaaacttagtatctctt-aatctacagttttgtggattatgttcttt |
8453363 |
T |
|
| Q |
398 |
tttgccaacacttggacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattca |
497 |
Q |
| |
|
|||||| ||||||| |||||| | |||||||| ||||| |||| |||||||| |||||||||||||| | |||||| ||||| | || || |||| |
|
|
| T |
8453362 |
gttgccaccacttgggacactcccctttctcaagatgctttctatttcagactgtgatggaataaagatcataggtgaagagttttacgacagtagttca |
8453263 |
T |
|
| Q |
498 |
acaattgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatg---tgtaaggtttcctctgcttaaagagc |
594 |
Q |
| |
|
| || ||| | |||| ||| |||||| ||||| ||||||| | ||| ||| |||||||||||| | || || | |||||||| |||||||||||| |
|
|
| T |
8453262 |
ataaatgtgctgttcaggtctcttgaagttttgaaatttgagaagatgaacaattgggaggaatggttgtgtcttgaagggtttcctttgcttaaagagc |
8453163 |
T |
|
| Q |
595 |
tttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattg |
662 |
Q |
| |
|
|||||||| | | ||||| |||||||||| || | |||||||| ||||||||||||||||||||| |
|
|
| T |
8453162 |
tttatataagagaatgtcccaaattgaaaatgtccctgcctcaacaccttccttctttacaaaaattg |
8453095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 258 - 662
Target Start/End: Complemental strand, 6946138 - 6945728
Alignment:
| Q |
258 |
gaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaact |
357 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||| ||| ||| ||||||| || ||||| ||||||||||||||||| ||| ||||||| | |||| |
|
|
| T |
6946138 |
gaggctcttcaaccaaagagcaacttgaagaagctcaccatcacatactacaatggcagtagctttccaaattggctaagtggttttcatttatcaaact |
6946039 |
T |
|
| Q |
358 |
tagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccatttatgactgtgaagg |
457 |
Q |
| |
|
||||||||||| || | |||| ||| |||||||| ||| |||| ||||| || |||| ||||||||| | |||| |||| ||||| | || |
|
|
| T |
6946038 |
tagtatctcttaaactgaaggactgtgtactatgttcccatttaccaatgcttgggcagttcccctctctcaaggagatttctatttcaaactgtaacgg |
6945939 |
T |
|
| Q |
458 |
aataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggag |
557 |
Q |
| |
|
|||||||||||| | ||||| ||||| ||||| | |||||| |||||| |||| |||||||||| ||||| ||| ||| |||||||||| |||||| |
|
|
| T |
6945938 |
aataaagatcatcggcgaagagttttacaacaatagtacaacaaatgttccgttcaggtcccttgaagttttgaaattggagcatatggtcaattgggag |
6945839 |
T |
|
| Q |
558 |
gaatggatatg---tgtaaggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcacct---tacctcaacatcttccttctt |
651 |
Q |
| |
|
|||||| | || || |||||||||| |||||||||||||| |||| ||||||||| ||||||||||| ||| | |||||||| |||||||||| |
|
|
| T |
6945838 |
gaatggttttgtcctgaaaggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggccttgctgcctcaacaccttccttctt |
6945739 |
T |
|
| Q |
652 |
tacaaaaattg |
662 |
Q |
| |
|
||||||||||| |
|
|
| T |
6945738 |
tacaaaaattg |
6945728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 258 - 661
Target Start/End: Complemental strand, 8470427 - 8470021
Alignment:
| Q |
258 |
gaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaact |
357 |
Q |
| |
|
|||||||| ||||||||| ||||||||| | ||| |||| |||| |||||||||| || |||||||| ||| |||||||| |||||||||| |||| |
|
|
| T |
8470427 |
gaggctcttcaaccaaataacaacttgaataggctttacatctcacaatacaaaggtaaaagctttccaaagtggataaggggttgtcatttaccaaact |
8470328 |
T |
|
| Q |
358 |
tagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccatttatgactgtgaagg |
457 |
Q |
| |
|
||||||||||| |||| || | ||| | |||| | ||||||| |||||||||| ||||| | ||||||| | ||| | || | ||||||| | || |
|
|
| T |
8470327 |
tagtatctcttaaattacagagctgtggatcatgtctccatttgccaccacttggacagctcccgtgtctcaaggagcttgctatctgtgactgtcatgg |
8470228 |
T |
|
| Q |
458 |
aataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggag |
557 |
Q |
| |
|
||||||||| |||| |||||| ||| ||||||| |||||||||| |||||| ||| |||||||||| ||||| ||||| | | ||| || |||||| |
|
|
| T |
8470227 |
aataaagataattggtgaagagtttcatggcaacaattcaacaaatgttccgttcttgtcccttgaagttttgaaatttgtgaagatgaacagttgggag |
8470128 |
T |
|
| Q |
558 |
gaatggatatg---tgtaaggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttac |
654 |
Q |
| |
|
|||||| | || || | |||||||| ||||||||||||||| |||| ||| ||||| |||||| |||| | || |||||||| ||||||||||||| |
|
|
| T |
8470127 |
gaatggttgtgtcttgaagggtttcctttgcttaaagagctttctataaaaagctgtcccgaattgagaagcgcattgcctcaacaccttccttctttac |
8470028 |
T |
|
| Q |
655 |
aaaaatt |
661 |
Q |
| |
|
||||||| |
|
|
| T |
8470027 |
aaaaatt |
8470021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 258 - 794
Target Start/End: Original strand, 6840067 - 6840600
Alignment:
| Q |
258 |
gaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaact |
357 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||||||| | |||||||||||||| ||| ||||||| ||||||||||| | |||||||| |||||| |
|
|
| T |
6840067 |
gaggctcttcaaccaaatagcaacttggagaagctcaacataaaacactacaaaggtaatagctttccaagttggctaagggcttgtcatttatccaact |
6840166 |
T |
|
| Q |
358 |
tagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccatttatgactgtgaagg |
457 |
Q |
| |
|
||||||||||| || | | || ||| ||||| || | ||||| || ||||| ||||||| || ||||| ||| ||||||||| | |
|
|
| T |
6840167 |
tagtatctcttcaactggatggatgtggactatgtccccg---------acttgagcagctcccctctctcagaaagctttctgtttgtgactgtgatga |
6840257 |
T |
|
| Q |
458 |
aataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggag |
557 |
Q |
| |
|
|||||||||||| ||| |||| ||||| | ||| |||| |||||||||||||| | ||| |||||| ||||| ||||||| | ||| ||| |||||| |
|
|
| T |
6840258 |
aataaagatcatcgatcaagagttttacgacaacgattcgacaattgttccatttaggtcgcttgaagttttgaaatttgagaagatgaacaattgggag |
6840357 |
T |
|
| Q |
558 |
gaatggatatg---tgtaaggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaa--gca-ccttacctcaacatcttccttctt |
651 |
Q |
| |
|
||||| | || || | |||||||| |||||||| || ||| |||| ||| ||||| |||||||||| ||| | ||| |||| ||| |||||| |
|
|
| T |
6840358 |
aaatggttttgtcttgaagggtttcctttgcttaaaaagatttctataagaaaatgtcccaaattgaaaaaggcagtgctgcctaaacaccttacttctt |
6840457 |
T |
|
| Q |
652 |
tacaaaaattgaatattagtggttgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatataagtgattgttccaa |
751 |
Q |
| |
|
||||||| || | |||||| |||||| |||||||||||| |||||| |||| || ||||| || ||||||||| |||||||| |||||| |||| |
|
|
| T |
6840458 |
tacaaaagctggagattagttattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttatatattcgattgtcccaa |
6840557 |
T |
|
| Q |
752 |
attcaaaagagtattgcctcaacatcttccatctttacaaaaa |
794 |
Q |
| |
|
||| ||||| | |||| ||||| ||||| |||||||||||| |
|
|
| T |
6840558 |
attgaaaagggctctgccacaacaccttccttctttacaaaaa |
6840600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 16 - 169
Target Start/End: Complemental strand, 6946401 - 6946248
Alignment:
| Q |
16 |
atatgggaaagctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatcttca |
115 |
Q |
| |
|
|||| ||||| ||||| ||||||||| |||| | |||||||||||||||| || ||||| |||||||| || || |||| ||||| ||||||||||| |
|
|
| T |
6946401 |
atataggaaatctaaacaatcttcaggccttaccttattttattgtggaagagcagaatgagtctgatcttaaggagttggggaaactaaaccatcttca |
6946302 |
T |
|
| Q |
116 |
tggaacaattcatattaaagggttgggtaatgtcagtgatactgcagatgctgc |
169 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| | |||| ||||||||||||| |
|
|
| T |
6946301 |
tggaacaattgatattaaagggttgggtaatgtgattgatcctgcagatgctgc |
6946248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 255 - 662
Target Start/End: Original strand, 6481145 - 6481555
Alignment:
| Q |
255 |
ttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttaccca |
354 |
Q |
| |
|
||||||||||| |||||||||| | ||| |||| ||| | ||| |||| || | ||||| |||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
6481145 |
ttggaggctcttcaaccaaatagaagcttaaagaggcttagcatctcacaatatagaggtaatagatttccaaattggataaggggttgtcatttaccca |
6481244 |
T |
|
| Q |
355 |
acttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccatttatgactgtga |
454 |
Q |
| |
|
|||||||||||||| || | ||| |||||||| ||||||| ||||||| |||||||| ||||||| | | ||||| |||| ||||| | |
|
|
| T |
6481245 |
acttagtatctcttcaaatgcgtcactgtggattatgttctcatttgccaccacttgggcaactcccctctctcagggagctttctatttcaaactgtaa |
6481344 |
T |
|
| Q |
455 |
aggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgg |
554 |
Q |
| |
|
| ||||||||||||| | |||||| || ||||| |||||||||| ||||| | |||||| ||| |||||| |||| |||| || |||| || | | |
|
|
| T |
6481345 |
aagaataaagatcatcggtgaagagttatatggaaataattcaaaaattgatgcattcaggtctcttgaagttttggaatttcagcggatggaaaatttg |
6481444 |
T |
|
| Q |
555 |
gaggaatggatatg---tgtaaggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctt |
651 |
Q |
| |
|
||||||||| |||| || | |||||| ||||||||||||| |||| || ||||||| ||||||||||| || | |||||||| |||||||||| |
|
|
| T |
6481445 |
gaggaatggttatgtcatgaagggtttctgtcgcttaaagagcttactataaaagattgtcccaaattgaaaagggcccttcctcaacaccttccttctt |
6481544 |
T |
|
| Q |
652 |
tacaaaaattg |
662 |
Q |
| |
|
|||| |||||| |
|
|
| T |
6481545 |
tacagaaattg |
6481555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 255 - 690
Target Start/End: Original strand, 6729885 - 6730323
Alignment:
| Q |
255 |
ttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttaccca |
354 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||| || | || ||| |||||||||| ||| |||||||||||||| |||||| |||||||||||| |
|
|
| T |
6729885 |
ttggaggctctacaaccaaatagaaacttgaagtgacttacaatctcacgatacaaaggtaatagctttccaaattggctgaggggttgtcatttaccca |
6729984 |
T |
|
| Q |
355 |
acttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccatttatgactgtga |
454 |
Q |
| |
|
||||||||||||||||| | | | ||| | | |||||| ||||| ||||||| || ||||| | ||| || | || |||| || ||| | |
|
|
| T |
6729985 |
acttagtatctcttgaactgcggagctgtgaaatttgttccctgttgccgccacttgggcagctcccatttcttaaagagctccgtatttcagattgtaa |
6730084 |
T |
|
| Q |
455 |
aggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgg |
554 |
Q |
| |
|
| |||||||||||| | |||| || ||||| |||||||||| |||||||||||||| ||| |||||| |||| ||||||| | ||| || ||| |
|
|
| T |
6730085 |
tgtaataaagatcatcggcaaagagttctatggaaataattcaataattgttccattcaggtctcttgaagtattgaaatttgagcaattggagaattgg |
6730184 |
T |
|
| Q |
555 |
gaggaatggatatgtgt--aag-gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctt |
651 |
Q |
| |
|
||||||||| ||| | | ||| ||||||||| |||||||||||| | ||| ||||||||| ||| ||||||| || | |||||||| |||||||||| |
|
|
| T |
6730185 |
gaggaatggttatttattgaagagtttcctctacttaaagagcttgaaataagaaattgtcccaaactgaaaagggccctgcctcaacaccttccttctt |
6730284 |
T |
|
| Q |
652 |
tacaaaaattgaatattagtggttgcaaagagttggagg |
690 |
Q |
| |
|
|| |||||||||| ||| | |||||||||||||||||| |
|
|
| T |
6730285 |
tagaaaaattgaagattgtttgttgcaaagagttggagg |
6730323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 387 - 662
Target Start/End: Original strand, 6795906 - 6796184
Alignment:
| Q |
387 |
ttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccattt-atgactgtgaaggaataaagatcattgatgaagatttttat |
485 |
Q |
| |
|
||||||||| ||||||| |||| || || ||||| ||||||||| | |||||||||| | || ||||| ||||||| |||||||| |||||| ||||| |
|
|
| T |
6795906 |
ttatgttccgatttgccagcactagggcagctcccctctctcaaggacctttccatttcaaga-tgtgacggaataatgatcattggtgaagaattttac |
6796004 |
T |
|
| Q |
486 |
ggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatg---tgtaaggtttcctc |
582 |
Q |
| |
|
||||| |||||||| |||| | |||| ||||||||| ||||| ||||||||| |||| ||| |||||||||||| | || || | |||||||| |
|
|
| T |
6796005 |
aacaatagttcaacaaatgtttcgttcaggtcccttgaggttttgaaatttgaggagatggacaattgggaggaatggttttgtcttgaagggtttcctt |
6796104 |
T |
|
| Q |
583 |
tgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattg |
662 |
Q |
| |
|
|||||||||||||||||||| || ||||| |||||||||| | |||||| | ||||||||||||||||||||| |
|
|
| T |
6796105 |
tgcttaaagagctttatataacaagttgtcacgaattgaaaagggctcagcctcaaaaccttccttctttacaaaaattg |
6796184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 306 - 690
Target Start/End: Original strand, 6450008 - 6450395
Alignment:
| Q |
306 |
tacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaa |
405 |
Q |
| |
|
|||||||||| ||| |||||||||||||| |||||| ||||||||||||||||||||||||||||| | | | ||| | | |||||| ||||| |
|
|
| T |
6450008 |
tacaaaggtaatagctttccaaattggctgaggggttgtcatttacccaacttagtatctcttgaactgcggagctgtgaaatttgttccctgttgccgc |
6450107 |
T |
|
| Q |
406 |
cacttggacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgt |
505 |
Q |
| |
|
||||||| || ||||| | ||| || | || |||| || ||| | |||||||||||||| | |||| || ||||| |||||||||| |||||| |
|
|
| T |
6450108 |
cacttgggcagctcccatttcttaaagagctccgtatttcagattgtaatggaataaagatcatcggcaaagagttctatggaaataattcaataattgt |
6450207 |
T |
|
| Q |
506 |
tccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatgtgt--aag-gtttcctctgcttaaagagctttatata |
602 |
Q |
| |
|
|||||||| || |||||| |||| ||||||| | ||| || |||||||||||| ||| | | ||| ||||||||| |||||||||||| | ||| |
|
|
| T |
6450208 |
tccattcagatctcttgaagtattgaaatttgagcagttggagaattgggaggaatggttatttattgaagagtttcctctacttaaagagcttgaaata |
6450307 |
T |
|
| Q |
603 |
gaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggagg |
690 |
Q |
| |
|
||||||||| ||| ||||||| || | |||||||| |||||||||||| |||||||||| ||| | ||||||| |||||||||| |
|
|
| T |
6450308 |
agaaattgtcccaaactgaaaagggccctgcctcaacaccttccttctttagaaaaattgaagattgtttgttgcaatgagttggagg |
6450395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 575 - 794
Target Start/End: Original strand, 6522833 - 6523052
Alignment:
| Q |
575 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggt |
674 |
Q |
| |
|
||||||| ||||||||||| ||| |||| ||||||||| |||||||||| | | |||||||| |||||||||||||||||| || || | || | |
|
|
| T |
6522833 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactggatgtatttgat |
6522932 |
T |
|
| Q |
675 |
tgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatataagtgattgttccaaattcaaaagagtattgcctcaac |
774 |
Q |
| |
|
||||| ||||||||||||| |||||| |||| || ||||| || ||||||||| ||| |||||| ||||| || |||| ||||| | ||||||||| |
|
|
| T |
6522933 |
tgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaac |
6523032 |
T |
|
| Q |
775 |
atcttccatctttacaaaaa |
794 |
Q |
| |
|
| ||||| |||||||||||| |
|
|
| T |
6523033 |
accttccttctttacaaaaa |
6523052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 720 - 825
Target Start/End: Original strand, 6555940 - 6556042
Alignment:
| Q |
720 |
cttaaagagctttatataagtgattgttccaaattcaaaagagtattgcctcaacatcttccatctttacaaaaattgtgtattatcaatgattgcaaca |
819 |
Q |
| |
|
|||||||||||||||||| ||||| | ||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
6555940 |
cttaaagagctttatatagaaaattgtcctaaattgaaaagagtattgcctcaacatcttccatctttacaaaatttgtg---gatcaatgattgcaaca |
6556036 |
T |
|
| Q |
820 |
tgttgg |
825 |
Q |
| |
|
|||||| |
|
|
| T |
6556037 |
tgttgg |
6556042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 577 - 793
Target Start/End: Original strand, 6840653 - 6840872
Alignment:
| Q |
577 |
ttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcacctt---acctcaacatcttccttctttacaaaaattgaatattagtgg |
673 |
Q |
| |
|
||||| ||||||||||| ||| |||| |||||| || ||||| ||||| |||| ||||||||| |||||||||||||||||| |||| ||| ||| |
|
|
| T |
6840653 |
ttcctttgcttaaagagatttctataagaaattgccccaaattaaaaagggccttgctacctcaacaccttccttctttacaaaaactgaagatttgtga |
6840752 |
T |
|
| Q |
674 |
ttgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatataagtgattgttccaaattcaaaagagtattgcctcaa |
773 |
Q |
| |
|
|||||| |||||||||||| |||||| |||| || ||||| || ||||||||| ||| |||| |||||| || |||| ||||| | |||||||| |
|
|
| T |
6840753 |
ttgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctatatccgattgtcccgaattgaaaagggctctgcctcaa |
6840852 |
T |
|
| Q |
774 |
catcttccatctttacaaaa |
793 |
Q |
| |
|
|| ||||| ||||||||||| |
|
|
| T |
6840853 |
caccttccttctttacaaaa |
6840872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 255 - 368
Target Start/End: Original strand, 8570114 - 8570227
Alignment:
| Q |
255 |
ttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttaccca |
354 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||| ||||| ||| ||| ||||||| || ||||| |||||||||||| ||| |||| || |||||||| |
|
|
| T |
8570114 |
ttggatgctcttcaaccaaatagcaacttgaagaggctcaccatcacatactacaatggcagtagctttccaaattggttaatgggttttcttttaccca |
8570213 |
T |
|
| Q |
355 |
acttagtatctctt |
368 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
8570214 |
acttagtatctctt |
8570227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 346 - 690
Target Start/End: Original strand, 6592600 - 6592947
Alignment:
| Q |
346 |
atttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccattta |
445 |
Q |
| |
|
|||||||||| |||||||| |||||||| ||| ||||| || |||| |||||| ||||||| || |||| ||||||||||| |||||| ||| |
|
|
| T |
6592600 |
atttacccaagttagtatcccttgaattgttgggatgtaaattccattccgaattgccaccacttgggcagttcccctctctcaagaagctttccttttc |
6592699 |
T |
|
| Q |
446 |
tgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatg |
545 |
Q |
| |
|
| |||||| |||||| ||||||||| | ||| ||||| ||| |||||||| ||| ||||||||| | | ||||||| ||| |||||||| | ||| |
|
|
| T |
6592700 |
aggctgtgatggaatagagatcattggtacagaattttacggctataattcatcaaatgttccatttagattccttgaaacattgcgatttgagaacatg |
6592799 |
T |
|
| Q |
546 |
gtcaactgggaggaatggatatgtgt--aaggtttcc-tctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatc |
642 |
Q |
| |
|
| ||| |||||||| ||||| | ||||||||| | ||||| ||||||||| |||| || ||||||| || |||||||| || | |||||||| | |
|
|
| T |
6592800 |
tctgaatggaaggaatggttatgtcttgaaggtttccctttgcttcaagagctttgtataaaacattgtcccaagttgaaaagagccctgcctcaacacc |
6592899 |
T |
|
| Q |
643 |
ttccttctttacaaaaattgaatattagtggttgcaaagagttggagg |
690 |
Q |
| |
|
|||||||||| ||||||||| | |||| || |||| |||||||||||| |
|
|
| T |
6592900 |
ttccttctttgcaaaaattggagattactgattgccaagagttggagg |
6592947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 575 - 794
Target Start/End: Original strand, 6521888 - 6522107
Alignment:
| Q |
575 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggt |
674 |
Q |
| |
|
||||||| ||||||||||| ||| |||| ||||||||| |||||||||| | | |||||||| |||||||||||||||||| || || | || | |
|
|
| T |
6521888 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactggatgtatttgat |
6521987 |
T |
|
| Q |
675 |
tgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatataagtgattgttccaaattcaaaagagtattgcctcaac |
774 |
Q |
| |
|
||||| ||||||||||||| |||||| |||| || ||||| || ||||||||| ||| |||||| ||||| || |||| ||||| | ||| ||||| |
|
|
| T |
6521988 |
tgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcatcaac |
6522087 |
T |
|
| Q |
775 |
atcttccatctttacaaaaa |
794 |
Q |
| |
|
| ||||| |||||||||||| |
|
|
| T |
6522088 |
accttccttctttacaaaaa |
6522107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 686 - 825
Target Start/End: Complemental strand, 8453206 - 8453070
Alignment:
| Q |
686 |
ggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatataagtgattgttccaaattcaaaagagtattgcctcaacatcttccatct |
785 |
Q |
| |
|
|||||||||||| |||||||||||||||| || |||||||||||||||||||| || ||| ||||||| |||| |||||||||| ||||| ||| |
|
|
| T |
8453206 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagctttatataagagaatgtcccaaattgaaaatgtccctgcctcaacaccttccttct |
8453107 |
T |
|
| Q |
786 |
ttacaaaaattgtgtattatcaatgattgcaacatgttgg |
825 |
Q |
| |
|
||||||||||||| | || ||||||||||| ||||||| |
|
|
| T |
8453106 |
ttacaaaaattgt---tcattaatgattgcaagatgttgg |
8453070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 575 - 794
Target Start/End: Original strand, 6840516 - 6840738
Alignment:
| Q |
575 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggt |
674 |
Q |
| |
|
||||||| ||||||||||| |||||||| ||||||| ||||||||||| | | || ||||| |||||||||||||||||| || || | || | |
|
|
| T |
6840516 |
gtttcctttgcttaaagagatttatatattcgattgtcccaaattgaaaagggctctgccacaacaccttccttctttacaaaaactgcatgtatttgat |
6840615 |
T |
|
| Q |
675 |
tgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatataagtgattgttccaaattcaaaagagtattg---cctc |
771 |
Q |
| |
|
||||| ||||||||| ||||||| |||||||||||| ||| || ||||||||| ||| |||||| |||| ||||||| ||||| | ||| |||| |
|
|
| T |
6840616 |
tgcaacgagttggagaaatggttttgtcttgaagggattcctttgcttaaagagatttctataagaaattgccccaaattaaaaagggccttgctacctc |
6840715 |
T |
|
| Q |
772 |
aacatcttccatctttacaaaaa |
794 |
Q |
| |
|
|||| ||||| |||||||||||| |
|
|
| T |
6840716 |
aacaccttccttctttacaaaaa |
6840738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 575 - 794
Target Start/End: Original strand, 6840924 - 6841143
Alignment:
| Q |
575 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggt |
674 |
Q |
| |
|
||||||| ||||||||||| ||| |||| ||||||||| |||||||||| | | |||||||| ||||||||||||||||| | | ||| | | | |
|
|
| T |
6840924 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaatctagagatttgggat |
6841023 |
T |
|
| Q |
675 |
tgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatataagtgattgttccaaattcaaaagagtattgcctcaac |
774 |
Q |
| |
|
||||| |||||||||||| |||||| |||| || ||||| || ||||||||| ||| |||||| ||||| || |||| ||||| | ||||||||| |
|
|
| T |
6841024 |
tgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaac |
6841123 |
T |
|
| Q |
775 |
atcttccatctttacaaaaa |
794 |
Q |
| |
|
| ||||| |||||||||||| |
|
|
| T |
6841124 |
accttccttctttacaaaaa |
6841143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 684 - 798
Target Start/End: Original strand, 6481442 - 6481556
Alignment:
| Q |
684 |
ttggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatataagtgattgttccaaattcaaaagagtattgcctcaacatcttccat |
783 |
Q |
| |
|
||||||||||||||||||| |||||||||||| || |||||||||||| ||||| |||||| ||||||| ||||| | | |||||||| ||||| | |
|
|
| T |
6481442 |
ttggaggaatggttatgtcatgaagggtttctgtcgcttaaagagcttactataaaagattgtcccaaattgaaaagggcccttcctcaacaccttcctt |
6481541 |
T |
|
| Q |
784 |
ctttacaaaaattgt |
798 |
Q |
| |
|
||||||| ||||||| |
|
|
| T |
6481542 |
ctttacagaaattgt |
6481556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 258 - 524
Target Start/End: Complemental strand, 7586738 - 7586472
Alignment:
| Q |
258 |
gaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaact |
357 |
Q |
| |
|
|||||||| |||||||||||| |||||||| ||| | ||| ||||||||||||||| ||| ||| |||||||| | |||||| || |||||||||||| |
|
|
| T |
7586738 |
gaggctcttcaaccaaatagcagcttgaagaggcttatcatctcacactacaaaggtaataggtttgcaaattggatgaggggttgtgatttacccaact |
7586639 |
T |
|
| Q |
358 |
tagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccatttatgactgtgaagg |
457 |
Q |
| |
|
|||| || || | | || ||| ||||||||| |||||| |||||||||||||||||| |||||| | |||| |||| | |||||| |
|
|
| T |
7586638 |
tagtttcaattagactaaatctctgtgctttatgttccgagttgccaccacttggacaactcccttgtctcaaagagatttcaatttcaggctgtgataa |
7586539 |
T |
|
| Q |
458 |
aataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaa |
524 |
Q |
| |
|
||||| |||||| | |||| ||||||||||||||||| |||| ||||||||||| ||||||||| |
|
|
| T |
7586538 |
aataaggatcatagggaaagaattttatggcaataattccacaaatgttccattcagatcccttgaa |
7586472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 304 - 524
Target Start/End: Original strand, 13271758 - 13271978
Alignment:
| Q |
304 |
actacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgcc |
403 |
Q |
| |
|
|||||| ||||||||| |||||||||||||| ||| | |||| ||||||| ||||||||||||||||| ||| ||||| | |||||| ||||| |
|
|
| T |
13271758 |
actacagaggtagtagctttccaaattggcttggggatcatcatctacccaatttagtatctcttgaattgttgggatgtaaactctgttcccagttgcc |
13271857 |
T |
|
| Q |
404 |
aacacttggacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaatt |
503 |
Q |
| |
|
| ||||||| || | ||||||||| |||| |||||||||| || |||| | |||||| ||||||||| | ||| |||| ||| ||||| || ||| | |
|
|
| T |
13271858 |
accacttgggcagttgccttctctcgagaagctttccatttctggctgtcatggaatagagatcattggttcagagttttgcggctataatccatcaaat |
13271957 |
T |
|
| Q |
504 |
gttccattcaagtcccttgaa |
524 |
Q |
| |
|
|||||||| | ||||||||| |
|
|
| T |
13271958 |
gttccatttagatcccttgaa |
13271978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 575 - 794
Target Start/End: Original strand, 6522158 - 6522377
Alignment:
| Q |
575 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggt |
674 |
Q |
| |
|
||||||| ||||||||||| ||| |||| ||||||||| |||||||||| | | | |||||| ||||||||||||||||| || | ||| | | |
|
|
| T |
6522158 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcatcaacaccttccttctttacaaaatctggagattcggaat |
6522257 |
T |
|
| Q |
675 |
tgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatataagtgattgttccaaattcaaaagagtattgcctcaac |
774 |
Q |
| |
|
||||| |||||||||||| |||||| |||| || ||||| || ||||||||| ||| |||||| ||||| || |||| ||||| | ||||||||| |
|
|
| T |
6522258 |
tgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaac |
6522357 |
T |
|
| Q |
775 |
atcttccatctttacaaaaa |
794 |
Q |
| |
|
| ||||| |||||||||||| |
|
|
| T |
6522358 |
accttccttctttacaaaaa |
6522377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 344 - 687
Target Start/End: Complemental strand, 6915885 - 6915539
Alignment:
| Q |
344 |
tcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccatt |
443 |
Q |
| |
|
||||||||| || ||||||||||||||||| ||| ||||| | ||||| ||||| ||||||| || |||| ||||||||||| |||| ||| |
|
|
| T |
6915885 |
tcatttaccaaatttagtatctcttgaattgttgggatgtaaactccgttcccagttgccgccacttgggcagttcccctctctcaagaagctttttatt |
6915786 |
T |
|
| Q |
444 |
tatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggata |
543 |
Q |
| |
|
| | |||||| |||||| | ||||||| | ||| || |||||| | |||||| ||| |||| |||| || ||||||||| |||| |||||||| | | |
|
|
| T |
6915785 |
tcaggctgtgatggaatagaaatcattggtacagagttctatggctacaattcatcaaatgtttcatttaaatcccttgaaactttgcgatttgagcaca |
6915686 |
T |
|
| Q |
544 |
tggtcaactgggaggaatggatatgtgt--aaggtttcc-tctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaaca |
640 |
Q |
| |
|
|| | | ||| |||||||| ||||| | || |||||| | ||||| ||||||||| |||| || ||||||| || |||||||| || | |||||||| |
|
|
| T |
6915685 |
tgtccgaatggaaggaatggttatgtcttgaatgtttccctttgcttcaagagctttgtataaaacattgtcccaagttgaaaagttccctgcctcaaca |
6915586 |
T |
|
| Q |
641 |
tcttccttctttacaaaaattgaatattagtggttgcaaagagttgg |
687 |
Q |
| |
|
||||||||||| ||||||||| | |||| || |||| ||||||||| |
|
|
| T |
6915585 |
ccttccttctttgcaaaaattggagattattgattgccaagagttgg |
6915539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 447 - 661
Target Start/End: Complemental strand, 8588490 - 8588273
Alignment:
| Q |
447 |
gactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatgg |
546 |
Q |
| |
|
|||||| ||| |||||||||||||| || || ||||| || ||||| ||||||||||||||||||| ||| |||||| |||| |||| | |||| |
|
|
| T |
8588490 |
gactgtaaagaaataaagatcattggtgccgacttttacggaaataactcaacaattgttccattcaggtctcttgaagttttggaatttaaacggatgg |
8588391 |
T |
|
| Q |
547 |
tcaactgggaggaatggatatg---tgtaaggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatct |
643 |
Q |
| |
|
||| ||||||||||||||||| | | |||||||| |||||||| |||| | |||| | |||||| |||||||||| | || |||||||| || |
|
|
| T |
8588390 |
acaattgggaggaatggatatgccttcaagggtttcctttgcttaaaaagctatttataagtgaatgtcctgaattgaaaagggctttgcctcaacacct |
8588291 |
T |
|
| Q |
644 |
tccttctttacaaaaatt |
661 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
8588290 |
tccttctttacaaaaatt |
8588273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 304 - 690
Target Start/End: Complemental strand, 6258026 - 6257637
Alignment:
| Q |
304 |
actacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgcc |
403 |
Q |
| |
|
|||||| ||||||||| |||||||||||||| ||| | | || |||| || ||||||||||||||||| ||| ||||| |||||| ||||| |
|
|
| T |
6258026 |
actacagaggtagtagctttccaaattggcttggggatcttaatctaccaaatttagtatctcttgaattagtgggatgtaaacattgttcccagttgcc |
6257927 |
T |
|
| Q |
404 |
aacacttggacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaatt |
503 |
Q |
| |
|
| ||||||| | |||||||||||||||| |||||||||| | |||| | |||||||||||||||| | ||| |||| ||| |||||||| ||| | |
|
|
| T |
6257926 |
accacttgggaagttcccttctctcaagaagctttccatttcaggctgtcatggaataaagatcattggttcagagttttgcggctataattcatcaaat |
6257827 |
T |
|
| Q |
504 |
gttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatg--tgtaaggttt-cctctgcttaaagagctttata |
600 |
Q |
| |
|
||| |||| | ||||||||| |||| | ||||| ||||| | ||| |||||||| |||| | ||||||| ||||||||| ||||||||| | |
|
|
| T |
6257826 |
gttgcatttagatcccttgaaactttgcgggttgagtatatgtctgaatggaaggaatggttatgccttgaaggtttccctctgcttcaagagctttgtc |
6257727 |
T |
|
| Q |
601 |
tagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggagg |
690 |
Q |
| |
|
|| || | ||||| || |||||||| || | ||||| |||||||||| ||| ||||| ||| | |||| || |||| |||||||||||| |
|
|
| T |
6257726 |
taaaacaatgtcccaagttgaaaagtgccctgcctcatcatcttccttgtttgcaaaagttggagattattgattgcgaagagttggagg |
6257637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 575 - 793
Target Start/End: Original strand, 6522023 - 6522241
Alignment:
| Q |
575 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggt |
674 |
Q |
| |
|
||||||| ||||||||||| ||| |||| ||||||||| |||||||||| | | | |||||| |||||||||||||||||| || | ||| | | |
|
|
| T |
6522023 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcatcaacaccttccttctttacaaaaactggagattcggaat |
6522122 |
T |
|
| Q |
675 |
tgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatataagtgattgttccaaattcaaaagagtattgcctcaac |
774 |
Q |
| |
|
||||| |||||||||||| |||||| |||| || ||||| || ||||||||| ||| |||||| ||||| || |||| ||||| | ||| ||||| |
|
|
| T |
6522123 |
tgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcatcaac |
6522222 |
T |
|
| Q |
775 |
atcttccatctttacaaaa |
793 |
Q |
| |
|
| ||||| ||||||||||| |
|
|
| T |
6522223 |
accttccttctttacaaaa |
6522241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 633 - 690
Target Start/End: Complemental strand, 5297237 - 5297180
Alignment:
| Q |
633 |
cctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggagg |
690 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||| |
|
|
| T |
5297237 |
cctcaacatcttccttctttgcaaaaattgaagattagtgattgccaagagttggagg |
5297180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 258 - 337
Target Start/End: Original strand, 6486191 - 6486270
Alignment:
| Q |
258 |
gaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaag |
337 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||| | || ||||||||||| | | ||||||| ||||||||| |
|
|
| T |
6486191 |
gaggctcttcaatcaaatagcaacttgaagaagctcaacatcaaacgctacaaaggtaatcgttttccaagttggctaag |
6486270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 635 - 794
Target Start/End: Original strand, 6521813 - 6521972
Alignment:
| Q |
635 |
tcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagctttat |
734 |
Q |
| |
|
|||||| |||||||||||||||||| || | ||| | |||||| |||||||||||| |||||| |||| || ||||| || ||||||||| ||| | |
|
|
| T |
6521813 |
tcaacaccttccttctttacaaaaactggagattcggaattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttct |
6521912 |
T |
|
| Q |
735 |
ataagtgattgttccaaattcaaaagagtattgcctcaacatcttccatctttacaaaaa |
794 |
Q |
| |
|
||||| ||||| || |||| ||||| | |||||||||| ||||| |||||||||||| |
|
|
| T |
6521913 |
ataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaa |
6521972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 635 - 794
Target Start/End: Original strand, 6522758 - 6522917
Alignment:
| Q |
635 |
tcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagctttat |
734 |
Q |
| |
|
|||||| |||||||||||||||||| || | ||| | |||||| |||||||||||| |||||| |||| || ||||| || ||||||||| ||| | |
|
|
| T |
6522758 |
tcaacaccttccttctttacaaaaactggagattcggaattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttct |
6522857 |
T |
|
| Q |
735 |
ataagtgattgttccaaattcaaaagagtattgcctcaacatcttccatctttacaaaaa |
794 |
Q |
| |
|
||||| ||||| || |||| ||||| | |||||||||| ||||| |||||||||||| |
|
|
| T |
6522858 |
ataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaa |
6522917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 304 - 686
Target Start/End: Complemental strand, 6898912 - 6898527
Alignment:
| Q |
304 |
actacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgcc |
403 |
Q |
| |
|
|||||| ||| |||||||||||||||||||| ||| | |||||||||||| ||||||||||| ||||| ||| ||||| | ||||| ||||| |
|
|
| T |
6898912 |
actacagaggcagtagatttccaaattggcttggggttcatcatttacccaatttagtatctctagaattgttgggatgtaaacttcgttcccagttgcc |
6898813 |
T |
|
| Q |
404 |
aacacttggacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaatt |
503 |
Q |
| |
|
||||||| || | || ||||||||||| |||||||||| | |||||| |||||| | ||||||| | ||| ||| |||| | |||||| ||| | |
|
|
| T |
6898812 |
cccacttgggcagttaccctctctcaagaagctttccatttcaggctgtgatggaatagatatcattggtacagagatttgtggctacaattcatcaaat |
6898713 |
T |
|
| Q |
504 |
gttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatg---tgtaaggtttcctctgcttaaagagctttata |
600 |
Q |
| |
|
| |||||| | ||||||||| |||| |||||||| | ||| | ||| |||||||| |||| || | | |||| | ||||| ||||||||| || |
|
|
| T |
6898712 |
gatccatttagatcccttgaaactttgcgatttgagcacatgtctgaatggaaggaatggttatgtcttgaatgttttcatttgcttcaagagctttgta |
6898613 |
T |
|
| Q |
601 |
tagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttg |
686 |
Q |
| |
|
| || ||||||| || |||||||| || | |||||||| ||||||||||| ||||| ||||| |||| || |||| |||||||| |
|
|
| T |
6898612 |
tcaaacattgtccgaagttgaaaagttccctgcctcaacaccttccttctttgcaaaagttgaaaattattgattgccaagagttg |
6898527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 258 - 341
Target Start/End: Complemental strand, 6932419 - 6932336
Alignment:
| Q |
258 |
gaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggt |
341 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||| | || ||||||||||| | | ||||||| |||||||| |||| |
|
|
| T |
6932419 |
gaggctcttcaatcaaatagcaacttgaagaagctcaacatcaaacgctacaaaggtaatcgttttccaagttggctaaagggt |
6932336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 304 - 442
Target Start/End: Complemental strand, 6236549 - 6236411
Alignment:
| Q |
304 |
actacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgcc |
403 |
Q |
| |
|
|||||| ||||||||| ||||| |||||||| ||| | |||| ||||||| ||||||||||||||||| ||| ||||| | |||||| ||||| |
|
|
| T |
6236549 |
actacagaggtagtagctttcctaattggcttggggatcatcatctacccaatttagtatctcttgaattgttgggatgtaaatattgttcccagttgcc |
6236450 |
T |
|
| Q |
404 |
aacacttggacaactcccttctctcaagaaactttccat |
442 |
Q |
| |
|
| ||||||| || |||||||||||||||| |||||||| |
|
|
| T |
6236449 |
accacttgggcagttcccttctctcaagaagctttccat |
6236411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 737
Target Start/End: Original strand, 6522293 - 6522455
Alignment:
| Q |
575 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggt |
674 |
Q |
| |
|
||||||| ||||||||||| ||| |||| ||||||||| |||||||||| | | |||||||| |||||||||||||||||| || || | || | |
|
|
| T |
6522293 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactggatgtatttgat |
6522392 |
T |
|
| Q |
675 |
tgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatata |
737 |
Q |
| |
|
||||| |||||| |||||| |||||| |||| || ||||| || ||||||||| ||| |||| |
|
|
| T |
6522393 |
tgcaacgagttgcaggaattgttatgccttggagagtttcctttgcttaaagagatttctata |
6522455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 737
Target Start/End: Original strand, 6522563 - 6522725
Alignment:
| Q |
575 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggt |
674 |
Q |
| |
|
||||||| ||||||||||| ||| |||| ||||||||| |||||||||| | | |||||||| |||||||||||||||||| || || | || | |
|
|
| T |
6522563 |
gtttcctttgcttaaagagatttctataacaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactggatgtatttgat |
6522662 |
T |
|
| Q |
675 |
tgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatata |
737 |
Q |
| |
|
||||| |||||| |||||| |||||| |||| || ||||| || ||||||||| ||| |||| |
|
|
| T |
6522663 |
tgcaacgagttgcaggaattgttatgccttggagagtttcctttgcttaaagagatttctata |
6522725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 793
Target Start/End: Original strand, 6840789 - 6841007
Alignment:
| Q |
575 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggt |
674 |
Q |
| |
|
||||||| ||||||||||| ||| |||| ||||||| |||||||||| | | |||||||| ||||||||||||||||| | | ||| | | | |
|
|
| T |
6840789 |
gtttcctttgcttaaagagatttctatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaatctagagatttgggat |
6840888 |
T |
|
| Q |
675 |
tgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatataagtgattgttccaaattcaaaagagtattgcctcaac |
774 |
Q |
| |
|
||||| |||||||||||| |||||| |||| || ||||| || ||||||||| ||| |||||| ||||| || |||| ||||| | ||||||||| |
|
|
| T |
6840889 |
tgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaac |
6840988 |
T |
|
| Q |
775 |
atcttccatctttacaaaa |
793 |
Q |
| |
|
| ||||| ||||||||||| |
|
|
| T |
6840989 |
accttccttctttacaaaa |
6841007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 686 - 796
Target Start/End: Complemental strand, 8470131 - 8470021
Alignment:
| Q |
686 |
ggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatataagtgattgttccaaattcaaaagagtattgcctcaacatcttccatct |
785 |
Q |
| |
|
|||||||||||| |||||||||||||||| || ||||||||||||| ||||| ||| || |||| | ||| | |||||||||||| ||||| ||| |
|
|
| T |
8470131 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagctttctataaaaagctgtcccgaattgagaagcgcattgcctcaacaccttccttct |
8470032 |
T |
|
| Q |
786 |
ttacaaaaatt |
796 |
Q |
| |
|
||||||||||| |
|
|
| T |
8470031 |
ttacaaaaatt |
8470021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 6480885 - 6480994
Alignment:
| Q |
16 |
atatgggaaagctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatcttca |
115 |
Q |
| |
|
|||| ||||||||||| | |||||| || || | |||||| ||||||||| | |||| ||||||||||||||| |||| |||||| ||||||||||| |
|
|
| T |
6480885 |
atataggaaagctaaacagtcttcaaacactgccttattttgttgtggaagagaaaaatggatctgatctcaaagagttggaaaaactaaaccatcttca |
6480984 |
T |
|
| Q |
116 |
tggaacaatt |
125 |
Q |
| |
|
||||| |||| |
|
|
| T |
6480985 |
tggaaaaatt |
6480994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 255 - 471
Target Start/End: Complemental strand, 6141159 - 6140943
Alignment:
| Q |
255 |
ttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttaccca |
354 |
Q |
| |
|
||||||||||| |||||||||| ||| | | || ||||| ||| | |||||| ||||||||| ||||| |||||||| ||| | |||| |||||| |
|
|
| T |
6141159 |
ttggaggctcttcaaccaaatagaaacctcatgaggctcaccatcaatgactacagaggtagtagctttcctaattggcttggggatcatcatctaccca |
6141060 |
T |
|
| Q |
355 |
acttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccatttatgactgtga |
454 |
Q |
| |
|
| ||||||||||||||||| ||| |||| |||||| |||||| ||||||| || |||||||||||||||| |||||||||| | |||| | |
|
|
| T |
6141059 |
atttagtatctcttgaattgttgggatgtacacactgttcccagttgccaccacttgggcagttcccttctctcaagaagctttccatttcaggctgtca |
6140960 |
T |
|
| Q |
455 |
aggaataaagatcattg |
471 |
Q |
| |
|
|||||| ||||||||| |
|
|
| T |
6140959 |
tggaatagagatcattg |
6140943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 575 - 671
Target Start/End: Original strand, 6522968 - 6523064
Alignment:
| Q |
575 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagt |
671 |
Q |
| |
|
||||||| ||||||||||| ||| |||| ||||||||| |||||||||| | | |||||||| |||||||||||||||||| |||| |||||| |
|
|
| T |
6522968 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagt |
6523064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 686 - 738
Target Start/End: Original strand, 6796073 - 6796125
Alignment:
| Q |
686 |
ggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatataa |
738 |
Q |
| |
|
|||||||||||| |||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
6796073 |
ggaggaatggttttgtcttgaagggtttcctttgcttaaagagctttatataa |
6796125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 8588778 - 8588694
Alignment:
| Q |
105 |
aaccatcttcatggaacaattcatattaaagggttgggtaatgtcagtgatactgcagatgctgccacattaaatttgaaagata |
189 |
Q |
| |
|
|||||||||||||| | ||||||||| ||||| ||||||||||| | |||| |||||||||||| ||| ||||||||||||| |
|
|
| T |
8588778 |
aaccatcttcatgggaaaattcatataaaaggtttgggtaatgtaattgatcctgcagatgctgtgacagccaatttgaaagata |
8588694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 387 - 538
Target Start/End: Original strand, 6486290 - 6486441
Alignment:
| Q |
387 |
ttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatg |
486 |
Q |
| |
|
|||||||| |||||||| |||| | ||||| || |||||| |||||||| ||| ||||| ||| | |||||||||||| |||||| ||||| | |
|
|
| T |
6486290 |
ttatgttctcgtttgccacgactttggcaactgccctctctctagaaacttcatgtttgtgactctgatgaaataaagatcatcagtgaagaattttacg |
6486389 |
T |
|
| Q |
487 |
gcaataattcaacaattgttccattcaagtcccttgaatatttgagatttga |
538 |
Q |
| |
|
|||||||||||||||| ||||||| | |||||||||| ||||| |||||| |
|
|
| T |
6486390 |
acaataattcaacaatttttccatttaggtcccttgaagttttgatatttga |
6486441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 635 - 794
Target Start/End: Original strand, 6522488 - 6522647
Alignment:
| Q |
635 |
tcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagctttat |
734 |
Q |
| |
|
|||||| |||||||||||||||||| || | ||| | |||||| |||||||||||| |||||| |||| || ||||| || ||||||||| ||| | |
|
|
| T |
6522488 |
tcaacaccttccttctttacaaaaactggagattcggaattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttct |
6522587 |
T |
|
| Q |
735 |
ataagtgattgttccaaattcaaaagagtattgcctcaacatcttccatctttacaaaaa |
794 |
Q |
| |
|
|||| ||||| || |||| ||||| | |||||||||| ||||| |||||||||||| |
|
|
| T |
6522588 |
ataacaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaa |
6522647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 418 - 537
Target Start/End: Original strand, 6850598 - 6850717
Alignment:
| Q |
418 |
tcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtc |
517 |
Q |
| |
|
|||| ||||||||||| |||||||||| | |||||| |||||| ||||||||| | ||| ||||| ||| | |||||| ||| ||||||||| || || |
|
|
| T |
6850598 |
tcccctctctcaagaatctttccatttcaggctgtgatggaatagagatcattggtccagagttttacggctacaattcatcaaatgttccatttaaatc |
6850697 |
T |
|
| Q |
518 |
ccttgaatatttgagatttg |
537 |
Q |
| |
|
||||||| |||| |||||| |
|
|
| T |
6850698 |
ccttgaaactttgcgatttg |
6850717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 304 - 686
Target Start/End: Complemental strand, 7748826 - 7748441
Alignment:
| Q |
304 |
actacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgcc |
403 |
Q |
| |
|
|||||| ||| ||||| |||||||||||||| | | | |||||||||||| ||||| |||||||||| ||| ||||| | |||||| || || |
|
|
| T |
7748826 |
actacagaggcagtagctttccaaattggcttggcgattatcatttacccaatttagttactcttgaattgttgggatgtaaactttgttcccagttacc |
7748727 |
T |
|
| Q |
404 |
aacacttggacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaatt |
503 |
Q |
| |
|
| ||||||| || ||| ||||||||||| |||||||||| | ||| || |||||| |||| |||| || ||| ||| |||| |||||||| ||| | |
|
|
| T |
7748726 |
atcacttgggcagttccactctctcaagaagctttccatttcaggctgcgatggaatagagattattggtgcagagatttgtggctataattcatcaaat |
7748627 |
T |
|
| Q |
504 |
gttccattcaagtcccttgaatatttgagatttgaggatatggtca-actgggaggaatggatatgtgt--aaggtttcc-tctgcttaaagagctttat |
599 |
Q |
| |
|
||| |||| | || |||||| |||| |||||||| | ||| ||| | ||| |||||||| ||||| | || |||||| | ||||| |||||||| | |
|
|
| T |
7748626 |
gtttcatttagatctcttgaaactttgcgatttgagcacatg-tcagaatggaaggaatggttatgtcttgaatgtttccctttgcttcgagagctttgt |
7748528 |
T |
|
| Q |
600 |
atagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttg |
686 |
Q |
| |
|
||| || ||||||| || |||||||| || | |||||||| ||||||||||| ||||||||| | |||| || |||| |||||||| |
|
|
| T |
7748527 |
ataaaacattgtccgaagttgaaaagttccctgcctcaacaccttccttctttgcaaaaattggagattattgattgccaagagttg |
7748441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 503 - 621
Target Start/End: Original strand, 4390321 - 4390442
Alignment:
| Q |
503 |
tgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatgtgt--aaggttt-cctctgcttaaagagctttat |
599 |
Q |
| |
|
||||||||||| || ||||||| |||| |||||||||| ||| ||| ||| |||||||| ||||||| ||||||| ||| ||||||||||||||| | |
|
|
| T |
4390321 |
tgttccattcaggttccttgaaattttgcgatttgaggacatgtccaattggaaggaatggttatgtgttgaaggtttccctttgcttaaagagctttct |
4390420 |
T |
|
| Q |
600 |
atagaaaattgtcctaaattga |
621 |
Q |
| |
|
||| |||||||| ||||||| |
|
|
| T |
4390421 |
atacgtaattgtccaaaattga |
4390442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 686 - 796
Target Start/End: Complemental strand, 8588383 - 8588273
Alignment:
| Q |
686 |
ggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatataagtgattgttccaaattcaaaagagtattgcctcaacatcttccatct |
785 |
Q |
| |
|
|||||||||| |||| ||| ||||||||| || |||||| |||| | ||||||||| ||| | |||| ||||| | ||||||||||| ||||| ||| |
|
|
| T |
8588383 |
ggaggaatggatatgccttcaagggtttcctttgcttaaaaagctatttataagtgaatgtcctgaattgaaaagggctttgcctcaacaccttccttct |
8588284 |
T |
|
| Q |
786 |
ttacaaaaatt |
796 |
Q |
| |
|
||||||||||| |
|
|
| T |
8588283 |
ttacaaaaatt |
8588273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 373
Target Start/End: Complemental strand, 6167715 - 6167646
Alignment:
| Q |
304 |
actacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatt |
373 |
Q |
| |
|
|||||| ||||||||| |||||||||||||| ||| | |||| ||||||| ||||||||||||||||| |
|
|
| T |
6167715 |
actacagaggtagtagctttccaaattggcttggggatcatcatctacccaatttagtatctcttgaatt |
6167646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 688 - 797
Target Start/End: Original strand, 6592810 - 6592919
Alignment:
| Q |
688 |
aggaatggttatgtcttgaagggtttctttctcttaaagagctttatataagtgattgttccaaattcaaaagagtattgcctcaacatcttccatcttt |
787 |
Q |
| |
|
|||||||||||||||||||||| || | || ||| ||||||||| ||||| ||||| |||| || ||||||| |||||||||| ||||| ||||| |
|
|
| T |
6592810 |
aggaatggttatgtcttgaaggtttccctttgcttcaagagctttgtataaaacattgtcccaagttgaaaagagccctgcctcaacaccttccttcttt |
6592909 |
T |
|
| Q |
788 |
acaaaaattg |
797 |
Q |
| |
|
||||||||| |
|
|
| T |
6592910 |
gcaaaaattg |
6592919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 574 - 655
Target Start/End: Complemental strand, 7586419 - 7586338
Alignment:
| Q |
574 |
ggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttaca |
655 |
Q |
| |
|
|||||||| ||||||||||||||| |||| |||| ||||| || |||||||| | | |||||||| |||||||||||||| |
|
|
| T |
7586419 |
ggtttcctttgcttaaagagctttctataaaaaaatgtcccaagttgaaaagggctctgcctcaacaccttccttctttaca |
7586338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 686 - 797
Target Start/End: Complemental strand, 6945842 - 6945728
Alignment:
| Q |
686 |
ggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatataagtgattgttccaaattcaaaagag---tattgcctcaacatcttcca |
782 |
Q |
| |
|
|||||||||||| |||| |||| |||||| || |||||||||||| |||||| ||||| ||||||| ||||| | | |||||||||| ||||| |
|
|
| T |
6945842 |
ggaggaatggttttgtcctgaaaggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggccttgctgcctcaacaccttcct |
6945743 |
T |
|
| Q |
783 |
tctttacaaaaattg |
797 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
6945742 |
tctttacaaaaattg |
6945728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 720 - 799
Target Start/End: Original strand, 6528374 - 6528453
Alignment:
| Q |
720 |
cttaaagagctttatataagtgattgttccaaattcaaaagagtattgcctcaacatcttccatctttacaaaaattgtg |
799 |
Q |
| |
|
||||||||||||| |||||| ||||| | ||||| ||||| ||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
6528374 |
cttaaagagctttctataagaaattgtcctaaattgaaaagcaccttgcctcaacagcttccttctttacaaaaattgtg |
6528453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 585 - 690
Target Start/End: Complemental strand, 6236265 - 6236160
Alignment:
| Q |
585 |
cttaaagagctttatatagaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagt |
684 |
Q |
| |
|
||||||||||||| |||| || ||||||| || |||||||| | | |||||| | ||||||| ||| ||||||||| | |||| || |||| |||||| |
|
|
| T |
6236265 |
cttaaagagctttgtataaaacattgtcccaagttgaaaagtgacctgcctcaataccttccttgtttgcaaaaattggagattattgattgccaagagt |
6236166 |
T |
|
| Q |
685 |
tggagg |
690 |
Q |
| |
|
|||||| |
|
|
| T |
6236165 |
tggagg |
6236160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 733
Target Start/End: Complemental strand, 6932168 - 6932119
Alignment:
| Q |
684 |
ttggaggaatggttatgtcttgaagggtttctttctcttaaagagcttta |
733 |
Q |
| |
|
||||||||||||||||||||||| ||||||| || |||| ||||||||| |
|
|
| T |
6932168 |
ttggaggaatggttatgtcttgatgggtttcctttgcttagagagcttta |
6932119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425 (Bit Score: 591; Significance: 0; HSPs: 1)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 591; E-Value: 0
Query Start/End: Original strand, 12 - 789
Target Start/End: Original strand, 8406 - 9192
Alignment:
| Q |
12 |
aagaatatgggaaagctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatc |
111 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8406 |
aagaatatgggaaagctaaataatcttcagaccatgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactcaaccatc |
8505 |
T |
|
| Q |
112 |
ttcatggaacaattcatattaaagggttgggtaatgtcagtgatactgcagatgctgccacattaaatttgaaagata---------tagaagaattaca |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||| || |
|
|
| T |
8506 |
ttcatggaacaattcatattaaagggttgggtaatgtcagtgatcctgcagatgctgccacatcaaatttgaaagataagaagtatttagaagaatttca |
8605 |
T |
|
| Q |
203 |
tactgagttcaatggcggacgagaagaaatggctgaaagtaacctgttagttttggaggctctaaaaccaaatagcaacttgaagaagctcaacattaca |
302 |
Q |
| |
|
| ||||||||||||||| |||||||||||| |||||| | ||||||| ||||||||| || ||||||||||||||||||||||||||||||| ||| |
|
|
| T |
8606 |
aatggagttcaatggcggaagagaagaaatggatgaaagaagtgtgttagtcttggaggctttacaaccaaatagcaacttgaagaagctcaacatcaca |
8705 |
T |
|
| Q |
303 |
cactacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctcttgaatttaagggttgtaagttatgttcctgtttgc |
402 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| || | ||||||||| ||||||||||||||||| |
|
|
| T |
8706 |
tgctacaaaggtagtagctttccaaattggctaaggggtagtcatttaccgaacttagtatctcttcaactgaagggttgtgggttatgttcctgtttgc |
8805 |
T |
|
| Q |
403 |
caacacttggacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagatttttatggcaataattcaacaat |
502 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
8806 |
cagcacttggacaactcccttctctcaagaaactttccatttatgactgtgaaggaataaagatcattgatgaagaattttatggcaataattcaacaat |
8905 |
T |
|
| Q |
503 |
tgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgggaggaatggatatgtgtaaggtttcctctgcttaaagagctttatata |
602 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8906 |
tgttccattcaagtcccttgaatatttgagatttgtggatatggtcaactgggaggaatggatatgtgtaaggtttcctctgcttaaagagctttatata |
9005 |
T |
|
| Q |
603 |
gaaaattgtcctaaattgaaaagcaccttacctcaacatcttccttctttacaaaaattgaatattagtggttgcaaagagttggaggaatggttatgtc |
702 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
9006 |
gaaaattgtcctaaattgaaaagcaccctgcctcaacatcttccttctttacaaaaattgattatttatggttgcaaagagttggaggaatggttatgtc |
9105 |
T |
|
| Q |
703 |
ttgaagggtttctttctcttaaagagctttatataagtgattgttccaaattcaaaagagtattgcctcaacatcttccatctttac |
789 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| | ||||||| ||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
9106 |
ttgaagggtttctttctcttaaagagctttctatatggtattgttctaaattcaaaagggtattgcctcaacatcttccttctttac |
9192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 85; Significance: 5e-40; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 5 - 189
Target Start/End: Original strand, 2623664 - 2623847
Alignment:
| Q |
5 |
gatgtcgaagaatatgggaaagctaaataatcttcagaccttgtcatattttattgtggaagcccataatgaatctgatctcaaagatttggcaaaactc |
104 |
Q |
| |
|
|||||| ||| |||||||||||||||| |||||||| | | ||| ||||||||||| ||||| ||||||| ||||||||| ||||| |||||||||| |
|
|
| T |
2623664 |
gatgtcaaagcatatgggaaagctaaacaatcttcaaagcatgttatattttattggggaagagcataatggatctgatcttaaagagttggcaaaacaa |
2623763 |
T |
|
| Q |
105 |
aaccatcttcatggaacaattcatattaaagggttgggtaatgtcagtgatactgcagatgctgccacattaaatttgaaagata |
189 |
Q |
| |
|
|||||| |||||||||||||||||||| |||| |||| ||||||||| ||| |||||||||||| ||| ||||||||||||||| |
|
|
| T |
2623764 |
aaccat-ttcatggaacaattcatattgaaggcttggataatgtcagcgatcttgcagatgctgctacagtaaatttgaaagata |
2623847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1643 (Bit Score: 51; Significance: 9e-20; HSPs: 1)
Name: scaffold1643
Description:
Target: scaffold1643; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 255 - 679
Target Start/End: Complemental strand, 1043 - 613
Alignment:
| Q |
255 |
ttggaggctctaaaaccaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttaccca |
354 |
Q |
| |
|
||||| ||||| ||||||||| ||||||||||| ||||| ||| | |||||| || || | |||||||||||| ||| ||| |||||||||||| |
|
|
| T |
1043 |
ttggatgctcttcaaccaaataacaacttgaagaggctcactattgaaggctacaatggcagcaactttccaaattggataacaggttgtcatttaccca |
944 |
T |
|
| Q |
355 |
acttagtatctcttgaatttaagggttgtaagttatgttcctgtttgccaacacttggacaactcccttctctcaagaaactttccatttatgactgtga |
454 |
Q |
| |
|
|||||||||||||| || | | ||| ||||||||| ||| ||| ||||||| || || |||||||||||||| ||||| |||| | ||||| |
|
|
| T |
943 |
acttagtatctcttcaactgttaagctgtggattatgttcccattttccaccacttgggcagcttccttctctcaagaatctttctatttcatattgtga |
844 |
T |
|
| Q |
455 |
aggaataaagatcattgatgaagatttttatggcaataattcaacaattgttccattcaagtcccttgaatatttgagatttgaggatatggtcaactgg |
554 |
Q |
| |
|
|||||||||||||||| |||||| || |||||| |||| ||| |||||| ||| |||||||||| ||||| ||||||| | || ||| ||| |
|
|
| T |
843 |
tggaataaagatcattggtgaagagattcatggcagcaatttaacgcatgttccgttcttgtcccttgaagttttgaaatttgagaagttgaacaattgg |
744 |
T |
|
| Q |
555 |
gaggaatggatatg---tgtaaggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaag---caccttacctcaacatcttcctt |
648 |
Q |
| |
|
||||||||| | || || | |||||||| |||||||||||||| |||| ||| ||||| ||||| |||| ||| | |||||||| ||||||| |
|
|
| T |
743 |
gaggaatggttgtgtcctgaagggtttcctttgcttaaagagcttactataagaaagtgtcccaaattagaaagggccactctgcctcaacaccttcctt |
644 |
T |
|
| Q |
649 |
ctttacaaaaattgaatattagtggttgcaa |
679 |
Q |
| |
|
|||||||||| ||||||||| || |||||| |
|
|
| T |
643 |
ttttacaaaaactgaatattactgattgcaa |
613 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 269 - 368
Target Start/End: Original strand, 6574499 - 6574598
Alignment:
| Q |
269 |
accaaatagcaacttgaagaagctcaacattacacactacaaaggtagtagatttccaaattggctaaggggtagtcatttacccaacttagtatctctt |
368 |
Q |
| |
|
||||||||||||| | ||| ||||| ||| | | ||||||| || || || |||||||||||||||||| || ||||||||| ||||||||||||||| |
|
|
| T |
6574499 |
accaaatagcaacctacagaggctcaccatcaaatactacaatggcagcagctttccaaattggctaaggtgttctcatttacctaacttagtatctctt |
6574598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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