View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20222_high_21 (Length: 302)
Name: NF20222_high_21
Description: NF20222
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20222_high_21 |
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Alignment Details
Target: chr1 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 13065879 - 13065590
Alignment:
| Q |
1 |
atttacataacaatagtcatgaagcctagtgaatacatgacagttaatgaactttgcagatattggggagaagcatcctttttgctaacacaattaatta |
100 |
Q |
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| T |
13065879 |
atttacataacaatagtcatgaagcctagtgaatacatgacagttaatgaactttgtagatattggggagaagcatcctttttgctaacacaattaatta |
13065780 |
T |
|
| Q |
101 |
gattataatcaacacatgaaactgatgcttataattggcacctcataatatagttataggtcacaaaaacataataaaaacattaacaattcaaaataat |
200 |
Q |
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| T |
13065779 |
gattataatcaacacatgaaagtgatgcttataattggcacctcataatatagttataggtcacaaaaacataataaaaacattaacaattcaaaataat |
13065680 |
T |
|
| Q |
201 |
cagggtgtgttaattggaccatatataacaatatttaacgacgacaactaatcagaaataggctaaaggaaacacaacatatatcaaatg |
290 |
Q |
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|||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13065679 |
cagggtgtgttaattggaccatatataacaatatttaatgatgacaactaatcagaaataggctaaaggaaacacaacatatatcaaatg |
13065590 |
T |
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