View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20222_low_38 (Length: 208)
Name: NF20222_low_38
Description: NF20222
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20222_low_38 |
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Alignment Details
Target: chr7 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 2303864 - 2304034
Alignment:
| Q |
20 |
aggttgttcaaattccctatttctaatggtatagagccactcaaattgtttatactaagagataaatacttcaaacttttcaatgaaccaatctcaatag |
119 |
Q |
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| T |
2303864 |
aggttgttcaaattccctatttctaatggtatagagccactcaaattgtttatactaagagataaatacttcaaacttttcaatgaaccaatctcaatag |
2303963 |
T |
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| Q |
120 |
gtattagaccaataaaactattatgactcaaatccaaatggatcaaattttgcaaccttcctatctctaga |
190 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2303964 |
gtattagaccaaaaaaactattatgactcaaatccaaatggatcaaattttgcaaccttcctatctctaga |
2304034 |
T |
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