View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20223_high_2 (Length: 421)
Name: NF20223_high_2
Description: NF20223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20223_high_2 |
 |  |
|
| [»] scaffold0083 (2 HSPs) |
 |  |
|
Alignment Details
Target: scaffold0083 (Bit Score: 269; Significance: 1e-150; HSPs: 2)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 129 - 421
Target Start/End: Complemental strand, 50795 - 50503
Alignment:
| Q |
129 |
gtgactgcaatttttcctttttcattgtatcaattattttgtaagatgtcggtccaatattaaccactgctgagctttgctttccagctttaaatacagt |
228 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50795 |
gtgactgcaatttttcctttttctttgtatcaattattttgtgggatgtgggtccaatattaaccactgctgagctttgctttccagctttaaatacagt |
50696 |
T |
 |
| Q |
229 |
actgttaaccattaattcacatacagctaagtcttcatgagtttacctttactatatacacttccaaccattcaaaaacagcactgtcagtgttatccat |
328 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50695 |
actgttaaccattaattcacatacagctaagtcttcatgagtttacctttactatatgcacttccaaccattcaaaaacagcactgtcagtgttatccat |
50596 |
T |
 |
| Q |
329 |
tcattcacaaccgactcttctttgagtcattgctcgtaatttccatcaaaatttcatactagttggtttgttttaacaatatccctagaagat |
421 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50595 |
tcattcacaaccgagtcttctttgagtcattgctcgtaatttccatcaaaatttcatactagttggtttgttttaacaatatccctagaagat |
50503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 50902 - 50805
Alignment:
| Q |
1 |
aaaaatgacaacatgatacatttattttagtatatgagaggactttaactagaaattgcatatttgaatcacttaccaaaagtaaaaatatatataat |
98 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
50902 |
aaaaatgacaacatgatacatttattttcgtatatgagaggagtttaactagaaattgcatatttgaatcactttccaaaagtaaaaatgtatataat |
50805 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 86; Significance: 6e-41; HSPs: 26)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 148 - 356
Target Start/End: Original strand, 10076299 - 10076505
Alignment:
| Q |
148 |
tttcattgtatcaattattttgtaagatgtcggtccaatattaaccactgctgagctttgctttccagcttt-aaatacagtactgttaaccattaattc |
246 |
Q |
| |
|
|||| |||||||||||||||||| ||||| |||||||||||||||||| ||||||||| |||||||||||| |||| || || ||||||||| |
|
|
| T |
10076299 |
tttccttgtatcaattattttgtgggatgtgggtccaatattaaccactactgagctttactttccagctttcaaattttgt----ttcttcattaattc |
10076394 |
T |
 |
| Q |
247 |
acatacagctaagtcttcatgagtttacc-tttactatatacacttccaaccattcaaaaacagcactgtcagtgttatccattcattcacaaccgactc |
345 |
Q |
| |
|
||||||| ||||||||| ||||| |||| ||||| |||| |||||||||||| ||||||||||| |||| |||||||||||||||||||||| ||| || |
|
|
| T |
10076395 |
acatacatataagtcttcttgagtctaccctttacaatatgcacttccaaccactcaaaaacagcgctgttagtgttatccattcattcacaagcgagtc |
10076494 |
T |
 |
| Q |
346 |
ttctttgagtc |
356 |
Q |
| |
|
||||||||||| |
|
|
| T |
10076495 |
ttctttgagtc |
10076505 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 10214806 - 10214903
Alignment:
| Q |
1 |
aaaaatgacaacatgatacatttatttt-agtatatgagaggactttaactagaaattgcatatttgaatcacttaccaaaagtaaaaatatatataa |
97 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| || || |||||||| ||||||| |
|
|
| T |
10214806 |
aaaaatgacaatatgatacatttatttttagtatatgagaggactttaactagaaattgcatatttgactcactttcctaaggtaaaaatgtatataa |
10214903 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 10223547 - 10223644
Alignment:
| Q |
1 |
aaaaatgacaacatgatacatttatttt-agtatatgagaggactttaactagaaattgcatatttgaatcacttaccaaaagtaaaaatatatataa |
97 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| || || |||||||| ||||||| |
|
|
| T |
10223547 |
aaaaatgacaatatgatacatttatttttagtatatgagaggactttaactagaaattgcatatttgactcactttcctaaggtaaaaatgtatataa |
10223644 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 10103870 - 10103966
Alignment:
| Q |
1 |
aaaaatgacaacatgatacatttatttt-agtatatgagaggactttaactagaaattgcatatttgaatcacttaccaaaagtaaaaatatatata |
96 |
Q |
| |
|
||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||| || ||||||||||| |||||| |
|
|
| T |
10103870 |
aaaaatgacaatatgatacatttatttttagtatatgagaggaatttaactagaaattgcatatttgactcactttcctaaagtaaaaatgtatata |
10103966 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 55 - 219
Target Start/End: Original strand, 11768325 - 11768494
Alignment:
| Q |
55 |
attgcatatttgaatcacttaccaaaagtaaaaatatatataat-tatatgctatttaa-gattccgatggttttagtgac---tgcaatttttcctttt |
149 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||||||| ||| |||||||||| |||| ||||| |||| | | ||||| |||||||||| |
|
|
| T |
11768325 |
attgcatatttgaatcactttccaaaagtaaaaatgtatataaagtatctgctatttaaagatttcgatgcctttaattaagtgtgcaacttttcctttt |
11768424 |
T |
 |
| Q |
150 |
tcattgtatcaattattttgtaagatgtcggtccaatattaaccactgctgagctttgctttccagcttt |
219 |
Q |
| |
|
|| |||||||||||||||||| ||||| |||||||||||||||| || ||| ||||||||||| ||||| |
|
|
| T |
11768425 |
tctttgtatcaattattttgtgggatgtaggtccaatattaaccaatggtgaactttgctttcccgcttt |
11768494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 363
Target Start/End: Complemental strand, 10376741 - 10376658
Alignment:
| Q |
280 |
ctatatacacttccaaccattcaaaaacagcactgtcagtgttatccattcattcacaaccgactcttctttgagtcattgctc |
363 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||| ||||||||||||| |||||| |
|
|
| T |
10376741 |
ctatatgcacttccaaccattcaaaaacagcactgttagtgttatccattcactcacaagcgagtcttctttgagtctttgctc |
10376658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 10364693 - 10364611
Alignment:
| Q |
280 |
ctatatacacttccaaccattcaaaaacagcactgtcagtgttatccattcattcacaaccgactcttctttgagtcattgct |
362 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| | | ||||||||||||| ||||| |
|
|
| T |
10364693 |
ctatatgcacttccaaccattcaaaaacagcactgttagtgttatccattcattcacaagcaagtcttctttgagtctttgct |
10364611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 10123685 - 10123755
Alignment:
| Q |
17 |
tacatttatttt-agtatatgagaggactttaactagaaattgcatatttgaatcacttaccaaaagtaaa |
86 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| || |||||||| |
|
|
| T |
10123685 |
tacatttatttttagtatatgagaggactttaacgagaaattgcatatttgaatcactttcctaaagtaaa |
10123755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 10180339 - 10180409
Alignment:
| Q |
17 |
tacatttatttt-agtatatgagaggactttaactagaaattgcatatttgaatcacttaccaaaagtaaa |
86 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| || |||||||| |
|
|
| T |
10180339 |
tacatttatttttagtatatgagaggactttaacgagaaattgcatatttgaatcactttcctaaagtaaa |
10180409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 10256463 - 10256524
Alignment:
| Q |
25 |
ttttagtatatgagaggactttaactagaaattgcatatttgaatcacttaccaaaagtaaa |
86 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||| |
|
|
| T |
10256463 |
ttttagtatatgagaggactttaacgagaaattgcatatttgaatcactttcctaaagtaaa |
10256524 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 10031125 - 10031204
Alignment:
| Q |
140 |
ttttcctttttcattgtatcaattattttgtaagatgtcggtccaatattaaccactgctgagctttgctttccagcttt |
219 |
Q |
| |
|
|||| ||||||| ||||||||||||||||| ||||| ||||||||||||| || || ||||||||||||||||||||| |
|
|
| T |
10031125 |
tttttctttttctttgtatcaattattttgagggatgtgggtccaatattaaacaatgatgagctttgctttccagcttt |
10031204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 9838029 - 9838114
Alignment:
| Q |
134 |
tgcaatttttcctttttcattgtatcaattattttgtaagatgtcggtccaatattaaccactgctgagctttgctttccagcttt |
219 |
Q |
| |
|
||||| |||| ||||||| ||||||||||||||||| ||||| ||||||||||||| || || | ||||||||||||||||||| |
|
|
| T |
9838029 |
tgcaactttttctttttctttgtatcaattattttgagggatgtgggtccaatattaaacaatgttaagctttgctttccagcttt |
9838114 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 9848907 - 9848992
Alignment:
| Q |
134 |
tgcaatttttcctttttcattgtatcaattattttgtaagatgtcggtccaatattaaccactgctgagctttgctttccagcttt |
219 |
Q |
| |
|
||||| |||| ||||||| ||||||||||||||||| ||||| ||||||||||||| || || | ||||||||||||||||||| |
|
|
| T |
9848907 |
tgcaactttttctttttctttgtatcaattattttgagggatgtgggtccaatattaaacaatgttaagctttgctttccagcttt |
9848992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 10028802 - 10028854
Alignment:
| Q |
34 |
atgagaggactttaactagaaattgcatatttgaatcacttaccaaaagtaaa |
86 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| || |||||||| |
|
|
| T |
10028802 |
atgagaggactttaacgagaaattgcatatttgaatcactttcctaaagtaaa |
10028854 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 9837824 - 9837907
Alignment:
| Q |
134 |
tgcaatttttcctttttcattgtatcaattattttgtaagatgtcggtccaatattaaccactgctgagctttgctttccagcttt |
219 |
Q |
| |
|
||||| |||||||||||| ||| |||||||||||||| ||||| ||||||||||||| || || ||||||||||||||||||| |
|
|
| T |
9837824 |
tgcaacttttcctttttctttgcatcaattattttgtgggatgtgggtccaatattaaacaatg--aagctttgctttccagcttt |
9837907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 9848702 - 9848785
Alignment:
| Q |
134 |
tgcaatttttcctttttcattgtatcaattattttgtaagatgtcggtccaatattaaccactgctgagctttgctttccagcttt |
219 |
Q |
| |
|
||||| |||||||||||| ||| |||||||||||||| ||||| ||||||||||||| || || ||||||||||||||||||| |
|
|
| T |
9848702 |
tgcaacttttcctttttctttgcatcaattattttgtgggatgtgggtccaatattaaacaatg--aagctttgctttccagcttt |
9848785 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 10126060 - 10126145
Alignment:
| Q |
134 |
tgcaatttttcctttttcattgtatcaattattttgtaagatgtcggtccaatattaaccactgctgagctttgctttccagcttt |
219 |
Q |
| |
|
||||| |||| ||||| | ||||||||||||||||| ||||| ||||||||||||| || || ||| ||||||||||||||||| |
|
|
| T |
10126060 |
tgcaactttttcttttgctttgtatcaattattttgagggatgtgggtccaatattaaacaatgatgacctttgctttccagcttt |
10126145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 10657930 - 10658006
Alignment:
| Q |
140 |
ttttcctttttcattgtatcaattattttgtaagatgtcggtccaatattaaccactgctgagctttgctttccagcttt |
219 |
Q |
| |
|
|||||||||||| ||||||||||||||||| | ||||| ||||| ||||| ||||| ||| ||||||||||||||||| |
|
|
| T |
10657930 |
ttttcctttttctttgtatcaattattttgaaggatgtgggtcc---attaatcactgatgacctttgctttccagcttt |
10658006 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 10662639 - 10662721
Alignment:
| Q |
134 |
tgcaatttttcctttttcattgtatcaattattttgtaagatgtcggtccaatattaaccactgctgagctttgctttccagcttt |
219 |
Q |
| |
|
||||| |||||||||||| |||||| |||||||||| | ||||| ||||| ||||| ||||| ||| ||||||||||||||||| |
|
|
| T |
10662639 |
tgcaacttttcctttttctttgtattaattattttgaaggatgtgggtcc---attaatcactgatgaactttgctttccagcttt |
10662721 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 10104042 - 10104100
Alignment:
| Q |
158 |
tcaattattttgtaagatgtcggtccaatattaaccactgctgagctttgctttccagcttt |
219 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
10104042 |
tcaattattttgtgggatgt--gtccaatattaac-actgctgagctttgctttccagcttt |
10104100 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 10214934 - 10214972
Alignment:
| Q |
180 |
gtccaatattaaccactgctgagctttgctttccagcttt |
219 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
10214934 |
gtccaatattaac-actgctgagctttgctttccagcttt |
10214972 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 10223675 - 10223713
Alignment:
| Q |
180 |
gtccaatattaaccactgctgagctttgctttccagcttt |
219 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
10223675 |
gtccaatattaac-actgctgagctttgctttccagcttt |
10223713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 10516630 - 10516706
Alignment:
| Q |
140 |
ttttcctttttcattgtatcaattattttgtaagatgtcggtccaatattaaccactgctgagctttgctttccagcttt |
219 |
Q |
| |
|
|||||||||||| ||||||||||||||||| | ||||| ||||| | ||| ||||| ||| || |||||||||||||| |
|
|
| T |
10516630 |
ttttcctttttctttgtatcaattattttgaaggatgtgggtcc---agtaatcactgatgacctatgctttccagcttt |
10516706 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 10123754 - 10123790
Alignment:
| Q |
184 |
aatattaaccactgctgagc-tttgctttccagcttt |
219 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |
|
|
| T |
10123754 |
aatattaaccactgctgagcttttgctttccagcttt |
10123790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 10256523 - 10256559
Alignment:
| Q |
184 |
aatattaaccactgctgagc-tttgctttccagcttt |
219 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |
|
|
| T |
10256523 |
aatattaaccactgctgagcttttgctttccagcttt |
10256559 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 10259874 - 10259930
Alignment:
| Q |
153 |
ttgtatcaattattttgtaagatgtcggtccaatattaaccactgctgagctttgct |
209 |
Q |
| |
|
||||||||||||||||| | ||||| ||||||||||||| || || ||| ||||||| |
|
|
| T |
10259874 |
ttgtatcaattattttgaaggatgtgggtccaatattaaacaatgatgacctttgct |
10259930 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 66; Significance: 5e-29; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 26793389 - 26793486
Alignment:
| Q |
1 |
aaaaatgacaacatgatacatttatttt-agtatatgagaggactttaactagaaattgcatatttgaatcacttaccaaaagtaaaaatatatataa |
97 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| || || |||||||| ||||||| |
|
|
| T |
26793389 |
aaaaatgacaatatgatacatttatttttagtatatgagaggactttaactagaaattgcatatttgactcactttcctaaggtaaaaatgtatataa |
26793486 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 26818905 - 26818979
Alignment:
| Q |
1 |
aaaaatgacaacatgatacatttatttt-agtatatgagaggactttaactagaaattgcatatttgaatcactt |
74 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26818905 |
aaaaatgacaatatgatacatttatttttagtatatgagaggactttaactagaaattgcatatttgactcactt |
26818979 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 26793517 - 26793555
Alignment:
| Q |
180 |
gtccaatattaaccactgctgagctttgctttccagcttt |
219 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
26793517 |
gtccaatattaac-actgctgagctttgctttccagcttt |
26793555 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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