View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20224_low_8 (Length: 351)

Name: NF20224_low_8
Description: NF20224
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20224_low_8
NF20224_low_8
[»] chr7 (48 HSPs)
chr7 (1-335)||(29037590-29037927)
chr7 (4-144)||(18249994-18250137)
chr7 (2-84)||(7447875-7447957)
chr7 (258-335)||(29017726-29017803)
chr7 (10-145)||(33898944-33899082)
chr7 (8-95)||(10618926-10619013)
chr7 (8-145)||(33935513-33935653)
chr7 (8-145)||(46573612-46573752)
chr7 (4-145)||(49034224-49034368)
chr7 (5-80)||(26719817-26719892)
chr7 (8-145)||(17025361-17025501)
chr7 (8-145)||(18740218-18740358)
chr7 (8-133)||(21760595-21760723)
chr7 (3-116)||(32356961-32357077)
chr7 (4-145)||(35543556-35543697)
chr7 (6-85)||(36472442-36472521)
chr7 (8-145)||(44421901-44422042)
chr7 (1-103)||(17608710-17608812)
chr7 (8-145)||(33124700-33124840)
chr7 (8-95)||(22075068-22075155)
chr7 (8-145)||(222226-222366)
chr7 (8-145)||(23226999-23227139)
chr7 (8-145)||(23236152-23236292)
chr7 (3-116)||(31491815-31491931)
chr7 (8-94)||(45055733-45055819)
chr7 (8-94)||(45176250-45176336)
chr7 (16-85)||(48634460-48634529)
chr7 (8-94)||(11595850-11595936)
chr7 (8-149)||(37334283-37334427)
chr7 (8-144)||(36927004-36927143)
chr7 (8-85)||(48505851-48505928)
chr7 (1-80)||(37239831-37239910)
chr7 (8-94)||(40480104-40480191)
chr7 (8-145)||(5776130-5776270)
chr7 (8-145)||(5794936-5795076)
chr7 (8-145)||(33171534-33171674)
chr7 (1-146)||(37401565-37401713)
chr7 (1-92)||(2466572-2466664)
chr7 (58-94)||(33473046-33473082)
chr7 (1-84)||(3942174-3942257)
chr7 (8-91)||(23237574-23237657)
chr7 (4-71)||(37250035-37250102)
chr7 (8-94)||(30919427-30919513)
chr7 (8-145)||(43052877-43053017)
chr7 (8-53)||(3930811-3930856)
chr7 (8-53)||(15434248-15434293)
chr7 (8-53)||(42072088-42072133)
chr7 (34-94)||(37106857-37106917)
[»] chr4 (49 HSPs)
chr4 (3-139)||(51995073-51995212)
chr4 (5-145)||(22184500-22184643)
chr4 (8-139)||(12673034-12673168)
chr4 (6-145)||(51407949-51408091)
chr4 (4-146)||(80493-80638)
chr4 (3-117)||(13455696-13455813)
chr4 (5-80)||(25134571-25134646)
chr4 (5-84)||(40797827-40797906)
chr4 (4-145)||(1803494-1803633)
chr4 (8-145)||(55891985-55892125)
chr4 (1-95)||(56224138-56224232)
chr4 (1-120)||(19455183-19455305)
chr4 (8-145)||(28265673-28265810)
chr4 (8-95)||(52813601-52813688)
chr4 (2-84)||(9469771-9469853)
chr4 (1-95)||(36156347-36156441)
chr4 (2-84)||(36543775-36543857)
chr4 (8-150)||(24007898-24008043)
chr4 (7-145)||(26632935-26633076)
chr4 (8-94)||(7505529-7505615)
chr4 (8-145)||(11055226-11055366)
chr4 (8-146)||(44378250-44378379)
chr4 (8-145)||(50606008-50606148)
chr4 (1-81)||(6866170-6866250)
chr4 (8-119)||(48151152-48151266)
chr4 (1-89)||(48339158-48339246)
chr4 (8-145)||(12789552-12789692)
chr4 (8-94)||(52706217-52706303)
chr4 (8-85)||(19852978-19853055)
chr4 (5-139)||(9222138-9222273)
chr4 (8-84)||(22721328-22721403)
chr4 (34-145)||(50146918-50147032)
chr4 (5-48)||(43387265-43387308)
chr4 (8-145)||(45674835-45674975)
chr4 (8-145)||(48977576-48977716)
chr4 (8-145)||(49405635-49405775)
chr4 (8-145)||(53369872-53370012)
chr4 (8-85)||(21441581-21441658)
chr4 (7-95)||(27891386-27891473)
chr4 (21-85)||(34718152-34718216)
chr4 (10-74)||(52733775-52733838)
chr4 (4-95)||(15697136-15697227)
chr4 (4-95)||(43812110-43812201)
chr4 (5-75)||(50710843-50710913)
chr4 (34-95)||(13761825-13761886)
chr4 (1-82)||(32397764-32397845)
chr4 (8-85)||(49820982-49821059)
chr4 (8-53)||(53369688-53369733)
chr4 (50-133)||(9874220-9874306)
[»] chr3 (32 HSPs)
chr3 (8-145)||(12710702-12710842)
chr3 (8-145)||(9505121-9505261)
chr3 (8-95)||(52199429-52199516)
chr3 (8-113)||(39942832-39942940)
chr3 (8-144)||(26049541-26049680)
chr3 (4-119)||(20550228-20550346)
chr3 (8-145)||(30662131-30662271)
chr3 (2-84)||(39135348-39135430)
chr3 (2-84)||(46293277-46293359)
chr3 (5-145)||(40943558-40943701)
chr3 (1-145)||(54393443-54393590)
chr3 (5-80)||(54432259-54432334)
chr3 (8-94)||(5418678-5418764)
chr3 (12-114)||(26136337-26136442)
chr3 (1-84)||(52934805-52934888)
chr3 (1-87)||(25253695-25253781)
chr3 (1-95)||(33438784-33438878)
chr3 (2-84)||(39469595-39469677)
chr3 (8-64)||(52199389-52199445)
chr3 (8-145)||(19560774-19560914)
chr3 (1-94)||(18074569-18074662)
chr3 (8-95)||(28242583-28242670)
chr3 (7-120)||(15822374-15822490)
chr3 (8-145)||(32689169-32689309)
chr3 (8-85)||(41609888-41609965)
chr3 (8-87)||(1674629-1674708)
chr3 (1-75)||(50965396-50965471)
chr3 (1-75)||(51068531-51068606)
chr3 (34-92)||(23206364-23206422)
chr3 (8-74)||(28700997-28701063)
chr3 (25-95)||(33691969-33692039)
chr3 (1-55)||(53529683-53529737)
[»] chr1 (51 HSPs)
chr1 (3-146)||(50447336-50447482)
chr1 (8-145)||(28006350-28006490)
chr1 (8-147)||(24575909-24576051)
chr1 (3-94)||(27076569-27076660)
chr1 (3-145)||(39802767-39802912)
chr1 (7-119)||(5204495-5204610)
chr1 (1-145)||(35810711-35810858)
chr1 (5-139)||(40159636-40159773)
chr1 (4-145)||(29677519-29677663)
chr1 (4-145)||(38061178-38061322)
chr1 (1-82)||(46265010-46265091)
chr1 (10-146)||(47983257-47983396)
chr1 (8-95)||(31869594-31869681)
chr1 (8-85)||(23915660-23915737)
chr1 (39-145)||(12224575-12224684)
chr1 (5-80)||(15257239-15257314)
chr1 (15-145)||(44596524-44596657)
chr1 (8-145)||(15306493-15306633)
chr1 (28-145)||(21680656-21680776)
chr1 (1-146)||(25124884-25125032)
chr1 (8-94)||(43087520-43087606)
chr1 (1-82)||(7596386-7596467)
chr1 (34-95)||(14578638-14578699)
chr1 (1-82)||(42916180-42916261)
chr1 (7-146)||(7995970-7996112)
chr1 (1-119)||(45653457-45653578)
chr1 (8-94)||(19508528-19508614)
chr1 (8-145)||(24469817-24469957)
chr1 (8-145)||(32179858-32179998)
chr1 (12-145)||(45581008-45581144)
chr1 (8-94)||(48575134-48575220)
chr1 (41-145)||(6413272-6413379)
chr1 (1-145)||(7016075-7016222)
chr1 (5-145)||(7956321-7956464)
chr1 (1-94)||(20349139-20349232)
chr1 (1-95)||(20347659-20347753)
chr1 (8-145)||(36419101-36419241)
chr1 (8-145)||(47602862-47603002)
chr1 (1-94)||(14796581-14796674)
chr1 (1-94)||(14805455-14805548)
chr1 (8-85)||(37441249-37441326)
chr1 (1-74)||(40002887-40002960)
chr1 (10-145)||(7702837-7702975)
chr1 (34-82)||(15662975-15663023)
chr1 (3-95)||(42937069-42937161)
chr1 (8-55)||(8828319-8828366)
chr1 (8-133)||(31816568-31816696)
chr1 (8-81)||(13645247-13645320)
chr1 (8-81)||(23916810-23916883)
chr1 (34-74)||(15014341-15014381)
chr1 (27-75)||(30251443-30251491)
[»] chr5 (34 HSPs)
chr5 (2-145)||(3801364-3801510)
chr5 (4-146)||(27450580-27450725)
chr5 (4-145)||(34719657-34719801)
chr5 (4-145)||(19716179-19716318)
chr5 (4-145)||(39407402-39407546)
chr5 (4-145)||(10493981-10494125)
chr5 (8-145)||(27196077-27196217)
chr5 (2-84)||(38522925-38523007)
chr5 (8-95)||(1840740-1840827)
chr5 (4-142)||(26299843-26299984)
chr5 (4-145)||(26298307-26298451)
chr5 (8-94)||(41783325-41783411)
chr5 (5-95)||(19282167-19282257)
chr5 (8-146)||(27906098-27906239)
chr5 (11-145)||(34724754-34724891)
chr5 (1-75)||(2676009-2676083)
chr5 (8-94)||(14500760-14500846)
chr5 (8-94)||(26218047-26218133)
chr5 (4-94)||(34723707-34723797)
chr5 (4-145)||(34857343-34857487)
chr5 (4-74)||(39409136-39409206)
chr5 (18-145)||(32945021-32945151)
chr5 (8-94)||(11136061-11136146)
chr5 (4-85)||(1225347-1225428)
chr5 (5-74)||(28246729-28246798)
chr5 (1-94)||(30660961-30661054)
chr5 (3-92)||(17168499-17168590)
chr5 (34-82)||(20190650-20190698)
chr5 (2-54)||(32157031-32157083)
chr5 (3-90)||(1091119-1091205)
chr5 (3-94)||(24536002-24536093)
chr5 (2-145)||(15933154-15933303)
chr5 (8-85)||(18880192-18880269)
chr5 (35-80)||(24202729-24202774)
[»] chr6 (16 HSPs)
chr6 (4-145)||(3081718-3081862)
chr6 (5-145)||(13312019-13312164)
chr6 (5-119)||(6999264-6999381)
chr6 (5-145)||(4441301-4441444)
chr6 (18-145)||(1501858-1501988)
chr6 (1-95)||(10961849-10961943)
chr6 (1-145)||(5640252-5640399)
chr6 (4-145)||(7437300-7437444)
chr6 (18-145)||(17441168-17441298)
chr6 (1-82)||(9950826-9950907)
chr6 (8-145)||(10346721-10346861)
chr6 (4-95)||(27984943-27985034)
chr6 (8-94)||(22295916-22296002)
chr6 (8-49)||(8200642-8200683)
chr6 (1-50)||(12428880-12428929)
chr6 (8-119)||(21093270-21093384)
[»] scaffold0171 (1 HSPs)
scaffold0171 (8-146)||(21088-21228)
[»] chr2 (28 HSPs)
chr2 (8-145)||(3409188-3409328)
chr2 (8-142)||(44740486-44740623)
chr2 (4-145)||(40458917-40459061)
chr2 (7-146)||(27464571-27464713)
chr2 (7-94)||(11007026-11007113)
chr2 (1-94)||(34116227-34116320)
chr2 (1-95)||(2578072-2578166)
chr2 (8-94)||(2647028-2647114)
chr2 (3-122)||(12070537-12070659)
chr2 (10-85)||(24844729-24844804)
chr2 (8-145)||(27634671-27634811)
chr2 (1-94)||(2328345-2328438)
chr2 (1-82)||(30713149-30713230)
chr2 (8-84)||(1094457-1094533)
chr2 (1-95)||(27902492-27902585)
chr2 (52-145)||(29806950-29807046)
chr2 (8-145)||(33831495-33831635)
chr2 (8-113)||(34064705-34064813)
chr2 (1-75)||(38409644-38409718)
chr2 (8-85)||(26436354-26436431)
chr2 (20-119)||(41332243-41332345)
chr2 (1-111)||(9753100-9753212)
chr2 (7-94)||(13829877-13829964)
chr2 (37-95)||(20203767-20203825)
chr2 (1-94)||(14103260-14103353)
chr2 (8-85)||(36538656-36538733)
chr2 (1-54)||(39690163-39690216)
chr2 (18-133)||(33163992-33164110)
[»] chr8 (11 HSPs)
chr8 (8-145)||(3307934-3308074)
chr8 (8-116)||(1091727-1091838)
chr8 (8-82)||(27189148-27189222)
chr8 (45-133)||(43384831-43384922)
chr8 (8-145)||(453483-453623)
chr8 (8-94)||(34655035-34655121)
chr8 (8-94)||(43967510-43967596)
chr8 (4-75)||(23181151-23181222)
chr8 (1-84)||(34516131-34516214)
chr8 (8-85)||(11161572-11161649)
chr8 (1-82)||(33280043-33280124)
[»] scaffold0063 (1 HSPs)
scaffold0063 (7-133)||(51314-51443)
[»] scaffold0444 (1 HSPs)
scaffold0444 (8-146)||(778-907)
[»] scaffold0224 (1 HSPs)
scaffold0224 (1-82)||(7374-7455)
[»] scaffold0204 (1 HSPs)
scaffold0204 (1-89)||(26680-26768)
[»] scaffold0022 (1 HSPs)
scaffold0022 (2-84)||(124545-124627)
[»] scaffold0002 (1 HSPs)
scaffold0002 (8-133)||(96280-96408)
[»] scaffold0260 (2 HSPs)
scaffold0260 (1-94)||(11462-11555)
scaffold0260 (1-95)||(9982-10076)
[»] scaffold0135 (1 HSPs)
scaffold0135 (5-139)||(32791-32926)
[»] scaffold0316 (1 HSPs)
scaffold0316 (8-145)||(19296-19436)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-91)||(25623-25712)
[»] scaffold0954 (1 HSPs)
scaffold0954 (8-91)||(241-324)
[»] scaffold0223 (1 HSPs)
scaffold0223 (18-145)||(14436-14566)


Alignment Details
Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 335
Target Start/End: Complemental strand, 29037927 - 29037590
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaa 97  Q
    |||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||   |||    
T  29037927 atatagtttaaattcaactcatttgtttaacggacttaattttcaactcaagttcgtctcatttggttcatgaacaaagttcagcaaattaattaccgaa 29037828  T
Q  98 tcgaatctcgaactattttcgaactggtacggttcactgccagccctatgcacgcgccatcactttacattttaaagcttcaacaaaatcgtgtatacca 197  Q
    |||| |||| |||||||||||| ||||||||||| ||||| || ||||| ||| |||||||||  |||||||||| ||||||||||||||||||||| ||    
T  29037827 tcgagtctcaaactattttcgagctggtacggttgactgctagtcctatacactcgccatcacgctacattttaatgcttcaacaaaatcgtgtatagca 29037728  T
Q  198 ccttgttaaacttattaacattccaaaaatccacattaataagtagtaatttaatataggagacttaccaaccccaataggaccaatcaggaaagacaat 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29037727 ccttgttaaacttattaacattccaaaaatccacattaataagtagtaatttaatataggagacttaccaaccccaataggaccaatcaggaaagacaat 29037628  T
Q  298 gtcaagagcttcattctttccacaataactaaaaatag 335  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29037627 gtcaagagcttcattctttccacaataactaaaaatag 29037590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 4 - 144
Target Start/End: Complemental strand, 18250137 - 18249994
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcg 100  Q
    ||||||||||||||||||||| |||||||  | ||||||||| |||||||||| ||||||| |||||||||| ||||||||| ||| ||||   ||||||    
T  18250137 tagttcaagttcaactcatttatttaacgagcataattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaatcaattatcgaatcg 18250038  T
Q  101 aatctcgaactattttcgaactggtacggttcactgccagccct 144  Q
    | ||| |||||||||||||  |||| ||||||| ||||||||||    
T  18250037 agtcttgaactattttcgagttggttcggttcattgccagccct 18249994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 7447875 - 7447957
Alignment:
Q  2 tatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaa 84  Q
    |||||||||||||||||||||||  |||||| ||||||||||||||||||||||| ||||||| |||||||||| ||||||||    
T  7447875 tatagttcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaa 7447957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 29017803 - 29017726
Alignment:
Q  258 agacttaccaaccccaataggaccaatcaggaaagacaatgtcaagagcttcattctttccacaataactaaaaatag 335  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||| ||||| | ||||||||||||||||||||    
T  29017803 agacttaccaaccccaaaaggaccaatcaggaaagacaatatcaagagcatcattttgtccacaataactaaaaatag 29017726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 10 - 145
Target Start/End: Complemental strand, 33899082 - 33898944
Alignment:
Q  10 aagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatctc 106  Q
    ||||||||||||||| |||||||  ||||||||||| |||||||||| ||||||| |||||||||| |||| |||  || |||||   ||||||||| ||    
T  33899082 aagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaactaattctcgaatcgaatatc 33898983  T
Q  107 gaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||||||  |||| ||||||| || ||||||||    
T  33898982 gaactattttcgagttggttcggttcattgtcagcccta 33898944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 10618926 - 10619013
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||||  |||||||||||||||||| ||||||||| | |||||||    
T  10618926 tcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttagttcatgaaccaagttcaacgagttaattg 10619013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 33935513 - 33935653
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||  ||| ||| |||||||||| ||||||||| | ||||||   ||||||| ||    
T  33935513 tcaagttcatctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattatcgaatcgagtc 33935612  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
     | ||||||| ||||  |||| || |||| |||||||||||    
T  33935613 ccaaactattgtcgagttggttcgattcattgccagcccta 33935653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 46573752 - 46573612
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    |||||||| |||||||| |||||||  ||||||||||| || ||||||| ||||||| |||||||||| ||||||||| | | ||||   ||||||||||    
T  46573752 tcaagttcgactcatttatttaacgagcttaattttcaacttaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatc 46573653  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    ||||| |||||| ||  |||| ||||||| |||||||||||    
T  46573652 tcgaattatttttgagttggttcggttcattgccagcccta 46573612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 145
Target Start/End: Complemental strand, 49034368 - 49034224
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcg 100  Q
    |||||||||||| |||||||| ||| |||  ||||||||||| |||||||||| ||||||| |||||||||| ||||||||| ||  ||||   ||||||    
T  49034368 tagttcaagttcgactcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaaacaattaccgaatcg 49034269  T
Q  101 aatctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    ||| |||||||||||||||  |||  ||||||  |||||||||||    
T  49034268 aatttcgaactattttcgagttggatcggttcgttgccagcccta 49034224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 26719817 - 26719892
Alignment:
Q  5 agttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagt 80  Q
    |||||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||| |||||||||| ||||    
T  26719817 agttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagt 26719892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 17025501 - 17025361
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    |||||||| |||||||| |||||||  ||||||||||| |||||||||| ||||||| |||| ||||| ||||||||| | | ||||   |||||||| |    
T  17025501 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgagtcaattatcgaatcgaacc 17025402  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    | |||||||||||||  |||| ||||||| || ||||||||    
T  17025401 ttgaactattttcgagttggttcggttcattgtcagcccta 17025361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 18740358 - 18740218
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    |||||||| |||||||| |||||||  ||||||||||| |||||||||| ||||||| |||||||||| ||||| ||  | | ||||    |||||||||    
T  18740358 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtttaatgagtcaattatcaaatcgaatc 18740259  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||||||||  |||| ||||||| |||| ||||||    
T  18740258 tcgaactattttcgagttggttcggttcattgccggcccta 18740218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 133
Target Start/End: Complemental strand, 21760723 - 21760595
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||||||||||||| |||||||   ||| |||||| |||||||||| ||||||| |||| ||||||||||||||| ||| ||||   ||||||| |     
T  21760723 tcaagttcaactcatttatttaacgagtttagttttcaactcaagttcgactcatttggttcgtgaacaaagttcaacgaatcaattatcgaatcgagtt 21760624  T
Q  105 tcgaactattttcgaactggtacggttca 133  Q
    |||||||||||||||  |||| |||||||    
T  21760623 tcgaactattttcgagttggttcggttca 21760595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 32356961 - 32357077
Alignment:
Q  3 atagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatc 99  Q
    |||||| ||||||||||| |||  |||||| |||| ||||||| ||||| |||| |||||||||||||||||  ||||||||| ||||||||   |||||    
T  32356961 atagtttaagttcaactcgtttacttaacgaactttattttcaactcaaattcggctcatttagttcatgaatcaagttcaacgaattaattatcgaatc 32357060  T
Q  100 gaatctcgaactatttt 116  Q
    || ||||||||||||||    
T  32357061 gagtctcgaactatttt 32357077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 145
Target Start/End: Complemental strand, 35543697 - 35543556
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcg 100  Q
    ||||||||||||||||||||| ||   ||  ||||||||||| |||||||||| |||||||||||||||||| ||||||||| ||| ||||   |||| |    
T  35543697 tagttcaagttcaactcatttatt---cgagcttaattttcaactcaagttcgactcatttagttcatgaaccaagttcaacgaatcaattatcgaatgg 35543601  T
Q  101 aatctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    | |||| ||||||||||||  |||| || |||| || ||||||||    
T  35543600 agtctcaaactattttcgagttggttcgattcattgtcagcccta 35543556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 36472442 - 36472521
Alignment:
Q  6 gttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaac 85  Q
    |||||||||||||| |||| |||||||  ||||||||||| |||||||||| ||||||| |||||||||| |||||||||    
T  36472442 gttcaagttcaacttatttatttaacgagcttaattttcaactcaagttcggctcatttggttcatgaaccaagttcaac 36472521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 44422042 - 44421901
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaa-ttttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaat 103  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||||  ||| ||| |||||||||| ||||||||| | ||||||   ||||||| |    
T  44422042 tcaagttcagctcatttgtttaacgaacttaaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagt 44421943  T
Q  104 ctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    | | ||||||| ||||  |||| ||||||| || ||||||||    
T  44421942 cccaaactattgtcgagttggttcggttcattgacagcccta 44421901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 17608710 - 17608812
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattgaatcg 100  Q
    |||||| |||||||||||||| ||  || ||| ||||||||||||| ||||||||| ||||||| |||||| ||| |||||| || ||| ||||||||||    
T  17608710 atatagatcaagttcaactcaattagttgacgaacttaattttcagatcaagttcggctcatttggttcatcaaccaagttcgacgaatcaattgaatcg 17608809  T
Q  101 aat 103  Q
    |||    
T  17608810 aat 17608812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 33124700 - 33124840
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    |||| |||| ||||||| ||||||| ||||||||||||||||||||||   |||||| |||||| ||| ||||||||| | ||||||   ||||||| |     
T  33124700 tcaaattcagctcatttatttaacgaacttaattttcagctcaagttcaattcatttggttcataaaccaagttcaacgagttaattgtcgaatcgagtt 33124799  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    || ||||||| ||||  |||| ||||||| |||||||||||    
T  33124800 tcaaactattgtcgagttggttcggttcattgccagcccta 33124840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 22075068 - 22075155
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||||  ||||||| |||| ||||| | ||||||| | |||||||    
T  22075068 tcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttcgtgaaccacgttcaacgagttaattg 22075155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 222366 - 222226
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||||| ||||||||||||||| | ||||||||||| ||||||||  ||| ||| |||||||||| || |||||| | ||||||   ||||| | ||    
T  222366 tcaagttcagctcatttgtttaacgaatttaattttcagttcaagttcagctcgtttggttcatgaaccaaattcaacgagttaattgtcgaatcaagtc 222267  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
     | ||||||| ||||  |||| ||||||| |||||||||||    
T  222266 ccaaactattgtcgagttggttcggttcattgccagcccta 222226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 23227139 - 23226999
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||||  ||||||| ||||||| ||||||||||||||||||||||  |||||||  |||||| || |||||||||||  |||||   ||||||| |     
T  23227139 tcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaagataattgtcgaatcgagtt 23227040  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||| ||||  |||| ||| ||| | |||||||||    
T  23227039 tcgaactattgtcgagttggttcggatcattaccagcccta 23226999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 23236292 - 23236152
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||||  ||||||| ||||||| ||||||||||||||||||||||  |||||||  |||||| || |||||||||||  |||||   ||||||| |     
T  23236292 tcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaagataattgtcgaatcgagtt 23236193  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||| ||||  |||| ||| ||| | |||||||||    
T  23236192 tcgaactattgtcgagttggttcggatcattaccagcccta 23236152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 31491815 - 31491931
Alignment:
Q  3 atagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatc 99  Q
    ||||||||||||||||| |||| ||||||| ||||||| || || | ||||||| ||||||| |||||||    ||||||||| ||||||||   |||||    
T  31491815 atagttcaagttcaactaatttatttaacgaacttaatattgagtttaagttcgactcatttggttcatgtgtcaagttcaacgaattaattatcgaatc 31491914  T
Q  100 gaatctcgaactatttt 116  Q
    ||||||| |||||||||    
T  31491915 gaatctcaaactatttt 31491931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 45055733 - 45055819
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||||||||||||||  |||||| ||||||| || |||||||||||| ||| ||| |||||||||| ||||||||| || |||||    
T  45055733 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaatt 45055819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 45176250 - 45176336
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||||||||||||||  |||||| ||||||||||||||| ||||||  ||| ||| |||||||||| |||||||||  |||||||    
T  45176250 tcaagttcaactcatttaattaacgaacttaattttcagctaaagttcagctcgtttggttcatgaaccaagttcaacggattaatt 45176336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 48634460 - 48634529
Alignment:
Q  16 aactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaac 85  Q
    ||||||||| ||||||| |||||||||| |||||||||||  ||||||| |||||||||| |||||||||    
T  48634460 aactcatttatttaacgaacttaatttttagctcaagttcaactcatttggttcatgaaccaagttcaac 48634529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 11595936 - 11595850
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    ||||| |||||||||||  |||||| ||||||| || |||||||||||| ||| ||| |||||||||| ||||||||| || |||||    
T  11595936 tcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaatt 11595850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 37334283 - 37334427
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| |  ||| ||  |||||||||| |||||||||  ||||   || |||||||||     
T  37334283 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgaatcgaatg 37334382  T
Q  105 tcgaactattttcgaactggtacggttcactgccagccctatgca 149  Q
    |||||||||  ||||  |||| ||||||| || || |||||||||    
T  37334383 tcgaactataatcgagttggttcggttcattgtcaaccctatgca 37334427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 36927004 - 36927143
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    |||||||||||||||||  |||||| |||||||||| ||||||||| |  ||| ||  |||||||||| |||||||||  ||||   || || ||||||     
T  36927004 tcaagttcaactcatttaattaacgaacttaatttttagctcaagtccaactcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatg 36927103  T
Q  105 tcgaactattttcgaactggtacggttcactgccagccct 144  Q
    |||||||||  ||||  |||| ||||||| ||||||||||    
T  36927104 tcgaactataatcgagttggttcggttcattgccagccct 36927143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 48505928 - 48505851
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaac 85  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| |  ||||||  |||||||||| |||||||||    
T  48505928 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggttcatgaaccaagttcaac 48505851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37239831 - 37239910
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagt 80  Q
    ||||| || |||||||||||||||| |||||  |||| ||||| ||||||| ||| |||||||| |||||||||| ||||    
T  37239831 atatatttgaagttcaactcatttgattaacaaacttgattttaagctcaaattcatctcatttggttcatgaaccaagt 37239910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 40480191 - 40480104
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctc-atttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||||||||||||||  |||||| ||||||| || |||||||||||| |||  ||| |||||||||| ||||||||| || |||||    
T  40480191 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgttttggttcatgaaccaagttcaacgaactaatt 40480104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 5776270 - 5776130
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| |  ||| ||  |||||||||| |||||||||  ||||   || || ||||||     
T  5776270 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 5776171  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||  ||||  |||| ||||||| ||||| |||||    
T  5776170 tcgaactataatcgagttggttcggttcattgccaacccta 5776130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 5795076 - 5794936
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| |  ||| ||  |||||||||| |||||||||  ||||   || || ||||||     
T  5795076 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatg 5794977  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||  |||   |||| ||||||| |||||||||||    
T  5794976 tcgaactataatcgggttggttcggttcattgccagcccta 5794936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 33171674 - 33171534
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg---aatcgaatc 104  Q
    ||||||||  ||||||| ||||| | |||||||||| |||||||||||  ||||||| |||||| ||  |||||||||||  ||||||    ||||| |     
T  33171674 tcaagttcggctcatttatttaatgaacttaatttttagctcaagttcagctcatttggttcataaatcaagttcaacaagataattgtcttatcgagtt 33171575  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||| ||||  |||| ||| ||| |||||||||||    
T  33171574 tcgaactattatcgagttggttcggatcattgccagcccta 33171534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 37401713 - 37401565
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaa 97  Q
    |||||| |||| |||| |||| ||  || ||| |||||||||||| |||||||| | ||||||| |||||||||  ||||||||||||| ||||   |||    
T  37401713 atatagctcaacttcagctcaattagttgacgaacttaattttcaactcaagtttggctcatttggttcatgaatcaagttcaacaaatcaattttcgaa 37401614  T
Q  98 tcgaatctcgaactattttcgaactggtacggttcactgccagccctat 146  Q
    ||||||  |||||| |  ||||| ||||  |||||| || |||||||||    
T  37401613 tcgaattacgaactctaatcgaattggtttggttcattgtcagccctat 37401565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 2466664 - 2466572
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgt-ctcatttagttcatgaacaaagttcaacaaattaa 92  Q
    |||||||| ||||| | ||||||| ||||||| ||| |||||||||||||||||    |||||| ||||| ||||| ||||||||||| ||||    
T  2466664 atatagtttaagtttagctcatttatttaacgaactaaattttcagctcaagttttagctcattaagttcgtgaaccaagttcaacaagttaa 2466572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 33473082 - 33473046
Alignment:
Q  58 ctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||||| ||||||||||||||||||||||||||||    
T  33473082 ctcatttaattcatgaacaaagttcaacaaattaatt 33473046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 3942174 - 3942257
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaa 84  Q
    |||||| ||||||||| |||| ||  || ||| ||||||||||||||||||||  |  |||||| |||||||||| ||||||||    
T  3942174 atatagctcaagttcagctcaattaattcacgaacttaattttcagctcaagtctggttcatttggttcatgaaccaagttcaa 3942257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 23237657 - 23237574
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta 91  Q
    |||||||||||||||||  |||||| |||||||| | | |||||||||| || |||  |||||||||| |||| |||| |||||    
T  23237657 tcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagtccaacgaatta 23237574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 37250035 - 37250102
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcat 71  Q
    ||||||||||| | |||| ||| |||||| | |||||||||||||||||| || ||||||| ||||||    
T  37250035 tagttcaagtttagctcacttggttaacgaaattaattttcagctcaagtgcggctcatttggttcat 37250102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 30919427 - 30919513
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    ||||||||||||||||| | |||||   ||| |||||| |||||||||| ||||||| |||| | ||| ||||||||| ||| ||||    
T  30919427 tcaagttcaactcatttatctaacgagtttagttttcaactcaagttcgactcatttggttcgtaaaccaagttcaacgaatcaatt 30919513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 43052877 - 43053017
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    ||||||||| ||||| |  |||||| ||||||||||| |||||||| |  ||||||  |||||||||| |||||||||  ||||   || || ||||||     
T  43052877 tcaagttcagctcatctaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 43052976  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||  ||||  |||| ||||||| ||||| |||||    
T  43052977 tcgaactataatcgagttggttcggttcattgccaacccta 43053017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 3930856 - 3930811
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagt 53  Q
    ||||||||| |||||||  |||||| ||||||||||||||||||||    
T  3930856 tcaagttcagctcatttaattaacgaacttaattttcagctcaagt 3930811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 15434248 - 15434293
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagt 53  Q
    ||||||||| |||||||  |||||| ||||||||||||||||||||    
T  15434248 tcaagttcagctcatttaattaacgaacttaattttcagctcaagt 15434293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 42072088 - 42072133
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagt 53  Q
    ||||||||| |||||||  |||||| ||||||||||||||||||||    
T  42072088 tcaagttcagctcatttaattaacgaacttaattttcagctcaagt 42072133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 37106857 - 37106917
Alignment:
Q  34 acttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||||||| |||||||||||| ||||||| || ||| ||| |||||| || ||||||||    
T  37106857 acttaatttttagctcaagttcggctcatttggtacattaactaagttcgacgaattaatt 37106917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 51995073 - 51995212
Alignment:
Q  3 atagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatc 99  Q
    |||||||||||||||||| ||| ||||||  |||||||||| |||||||||||| ||||||| |||||||||| ||||||||| ||||||||   |||||    
T  51995073 atagttcaagttcaactcgtttatttaacaaacttaattttgagctcaagttcggctcatttggttcatgaaccaagttcaacgaattaattatcgaatc 51995172  T
Q  100 gaatctcgaactattttcgaactggtacggttcactgcca 139  Q
    || |||||||||||||||||  |||| ||||||| |||||    
T  51995173 gagtctcgaactattttcgagttggttcggttcattgcca 51995212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 145
Target Start/End: Original strand, 22184500 - 22184643
Alignment:
Q  5 agttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcga 101  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||  ||| ||| |||||||||| ||||||||| | ||||||   |||||||    
T  22184500 agttcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcga 22184599  T
Q  102 atctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
     || | ||||||| ||||  |||| ||||||| |||||||||||    
T  22184600 gtcccaaactattgtcgagttggttcggttcattgccagcccta 22184643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 12673168 - 12673034
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    |||||||| |||||||| ||||| |  ||||||||||| |||||||||| ||||||| |||||||||| ||||||||| | | ||||   ||||||||||    
T  12673168 tcaagttcgactcatttatttaatgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatc 12673069  T
Q  105 tcgaactattttcgaactggtacggttcactgcca 139  Q
    |||||||||||||||  |||| ||||||| |||||    
T  12673068 tcgaactattttcgagttggttcggttcattgcca 12673034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 145
Target Start/End: Complemental strand, 51408091 - 51407949
Alignment:
Q  6 gttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaa 102  Q
    ||||||||||||||||||||||| ||| |||||||||| | | || ||||| ||||||| |||||||||| ||||| ||| ||||||||   |||||||     
T  51408091 gttcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcatttggttcatgaaccaagttgaacgaattaattaccgaatcgag 51407992  T
Q  103 tctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||||||||||  |||| | ||||| || ||||||||    
T  51407991 tctcgaactattttcgagttggttcagttcattgtcagcccta 51407949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 80493 - 80638
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcg 100  Q
    ||||||||||||  ||||||| ||| |||  ||||||||||| |||||||||| ||||||| |||||||||| ||||||||| ||  ||||   |||||     
T  80493 tagttcaagttcggctcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaaacaattaccgaatca 80592  T
Q  101 aatctcgaactattttcgaactggtacggttcactgccagccctat 146  Q
    ||| |||||||||||||||  |||  ||||||| ||||||||||||    
T  80593 aatttcgaactattttcgagttggatcggttcattgccagccctat 80638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 13455696 - 13455813
Alignment:
Q  3 atagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatc 99  Q
    |||||||||||||||||| ||| ||||||| |||||||||| |||||||||| | ||||||| |||||| ||  ||||||||| ||||||||   |||||    
T  13455696 atagttcaagttcaactcgtttatttaacgaacttaattttgagctcaagttggactcatttggttcataaatcaagttcaacgaattaattatcgaatc 13455795  T
Q  100 gaatctcgaactattttc 117  Q
    ||||||| || |||||||    
T  13455796 gaatctcaaattattttc 13455813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 25134571 - 25134646
Alignment:
Q  5 agttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagt 80  Q
    |||||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||| |||||||||| ||||    
T  25134571 agttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagt 25134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 40797827 - 40797906
Alignment:
Q  5 agttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaa 84  Q
    |||||||||||||||||||| |||||||  ||||||||||| |||||||||| ||||||| |||||||||| ||||||||    
T  40797827 agttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaa 40797906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 145
Target Start/End: Original strand, 1803494 - 1803633
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattgaatcgaat 103  Q
    ||||||||||||||||||||| |||||||  ||||||||| | |||||||||| ||||||  |||||||||  ||||| ||| ||| ||||  |||||||    
T  1803494 tagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagtttaacgaatcaatt--atcgaat 1803591  T
Q  104 ctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||| ||| |||||||  |||| ||||||| || ||||||||    
T  1803592 ctcgcactcttttcgagttggttcggttcattgtcagcccta 1803633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 55892125 - 55891985
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||||||||||||||||| ||| |||||||||| | | || ||||| ||| ||| |||||||||| ||||||||| ||||||||   ||||||| ||    
T  55892125 tcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcgtttggttcatgaaccaagttcaacgaattaattaccgaatcgagtc 55892026  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||||| ||  |||| | ||||| || ||||||||    
T  55892025 tcgaactatttttgagttggttcagttcattgtcagcccta 55891985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 56224138 - 56224232
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    ||||||||||||||||||| ||||  |||||| | ||||||||||||||||||||| ||||||| ||| || ||| ||||||||| |||||||||    
T  56224138 atatagttcaagttcaacttatttaattaacgaatttaattttcagctcaagttcggctcatttggtttattaaccaagttcaacgaattaattg 56224232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 19455305 - 19455183
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg---aa 97  Q
    |||||| |||||||||||||||||   ||||  |||||||||||| |||||||||  |||||||  ||||||||| ||||||||| |||||||||   ||    
T  19455305 atatagctcaagttcaactcatttagataacaaacttaattttcaactcaagttcagctcatttgattcatgaaccaagttcaacgaattaattgtcaaa 19455206  T
Q  98 tcgaatctcgaactattttcgaa 120  Q
    |||| | ||||||||||||||||    
T  19455205 tcgagtttcgaactattttcgaa 19455183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 28265810 - 28265673
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||||||||||||||||| ||| |||||||||| | ||||  |||   || ||| |||||||||| ||||||||| ||||||||   ||||||| ||    
T  28265810 tcaagttcaactcatttgtttgacgaacttaattttaaactcagattc---tcgtttggttcatgaaccaagttcaacgaattaattaccgaatcgagtc 28265714  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||||||||  |||| | ||||| |||||||||||    
T  28265713 tcgaactattttcgagttggttcagttcattgccagcccta 28265673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 52813601 - 52813688
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    ||||||||| ||||||||||||||| ||||||||||||||| ||||||  ||| ||| |||||||||| ||||||||| | |||||||    
T  52813601 tcaagttcagctcatttgtttaacgaacttaattttcagcttaagttcagctcgtttggttcatgaaccaagttcaacgagttaattg 52813688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 9469771 - 9469853
Alignment:
Q  2 tatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaa 84  Q
    ||||||||||||||| |||||||  | |||| ||||||||||||||||||||| | ||||||| |||||||||| ||||||||    
T  9469771 tatagttcaagttcagctcatttaatcaacgaacttaattttcagctcaagtttggctcatttggttcatgaaccaagttcaa 9469853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 36156441 - 36156347
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    |||||||||||||||| |||| ||  || ||| ||||||||||||||||||||||| ||||||| ||||| |||| ||||||||| ||| |||||    
T  36156441 atatagttcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcaagaaccaagttcaacgaatcaattg 36156347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 36543775 - 36543857
Alignment:
Q  2 tatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaa 84  Q
    ||||||||||||||| |||||||  |||||| ||||||||||||||||||||| | || |||| |||||||||| ||||||||    
T  36543775 tatagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggcttatttggttcatgaaccaagttcaa 36543857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 24008043 - 24007898
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaat---taattgaatcgaatc 104  Q
    ||||||||||||||||| ||||||| |||||||||| | ||||||||   ||| ||  |||||||||| ||||||||| |||   | ||  |||||||||    
T  24008043 tcaagttcaactcatttatttaacgaacttaattttaaactcaagtttaactcgttaggttcatgaaccaagttcaacgaatcaatcatcaaatcgaatc 24007944  T
Q  105 tcgaactattttcgaactggtacggttcactgccagccctatgcac 150  Q
    |||||||||||||||  |||| |  |||| || |||||||||||||    
T  24007943 tcgaactattttcgagttggttcaattcattgtcagccctatgcac 24007898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 145
Target Start/End: Original strand, 26632935 - 26633076
Alignment:
Q  7 ttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaat 103  Q
    |||||||||  ||||||| ||||||| ||||||||||||||||||||||  ||||||| ||| |||| | ||||||||| | ||||||   ||||||| |    
T  26632935 ttcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttaatgagccaagttcaacgagttaattgtcgaatcgagt 26633034  T
Q  104 ctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
      ||||||||| ||||  |||| ||||||| |||| ||||||    
T  26633035 tacgaactattatcgagttggttcggttcattgccggcccta 26633076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 7505529 - 7505615
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||||||||||||||  |||||| | |||||||| |||||||||||| ||||||| |||||||||  ||||||||| || |||||    
T  7505529 tcaagttcaactcatttagttaacgaatttaatttttagctcaagttcggctcatttggttcatgaatcaagttcaacgaactaatt 7505615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 11055366 - 11055226
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||||  ||||||| ||||||| ||||||||||| ||||||||||  ||||||| |||||||||| ||||||||  | ||||||   ||||||| |     
T  11055366 tcaagttcggctcatttatttaacgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatgagttaattatcgaatcgagtt 11055267  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
     ||||||||| ||||  |||| ||||||| || ||||||||    
T  11055266 ccgaactattgtcgagttggttcggttcattgtcagcccta 11055226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 44378250 - 44378379
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattgaatcgaatctcg 107  Q
    ||||||||||||||||| |||||||  ||||||||||| | ||| |||  ||||||| |||||||||| |||||||||         ||||||| ||||     
T  44378250 tcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatgaaccaagttcaac---------gaatcgagtctca 44378340  T
Q  108 aactattttcgaactggtacggttcactgccagccctat 146  Q
    ||||||||||||| |||| ||||||| || |||||||||    
T  44378341 aactattttcgaattggttcggttcattggcagccctat 44378379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 50606008 - 50606148
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| |  ||| ||  |||||||||| |||||||||  ||||   || || ||||||     
T  50606008 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatg 50606107  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||  ||||| |||| ||||||| |||||||||||    
T  50606108 tcgaactataatcgaattggttcggttcattgccagcccta 50606148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 6866250 - 6866170
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagtt 81  Q
    |||||| ||||||||| |||| ||  || ||| ||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  6866250 atatagctcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagtt 6866170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 48151266 - 48151152
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    |||||||| ||| |||| ||||||| ||||||||||||||||||||||  ||||||| |||  ||||| |||||||||||  |||||   ||||||| |     
T  48151266 tcaagttcgacttatttatttaacgaacttaattttcagctcaagttcagctcatttggtttgtgaaccaagttcaacaagataattgtcgaatcgagtt 48151167  T
Q  105 tcgaactattttcga 119  Q
    |||||||||| ||||    
T  48151166 tcgaactattgtcga 48151152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 48339246 - 48339158
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaat 89  Q
    |||||| | ||||||| |||| ||  || ||| ||||||||||||||||||||||| |||||||  ||||||||| |||||||||||||    
T  48339246 atatagcttaagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatgaaccaagttcaacaaat 48339158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 12789692 - 12789552
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    ||||||||| |||||||  |||||| ||||||||||||||||||||||  ||| ||  |||||| ||| |||||||||  ||||   || || ||||||     
T  12789692 tcaagttcagctcatttaattaacgaacttaattttcagctcaagttcagctcgttaggttcataaaccaagttcaacggattagatatcgagtcgaatg 12789593  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||  ||||  |||| ||||||| |||||||||||    
T  12789592 tcgaactataatcgagttggttcggttcattgccagcccta 12789552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 52706217 - 52706303
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||||||||||||||  |||||| ||||||| || |||||||||||| ||| ||| |||||||||| ||||| ||| || |||||    
T  52706217 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagtttaacgaactaatt 52706303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 19852978 - 19853055
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaac 85  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| | |||| ||  |||||||||| |||||||||    
T  19852978 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccatctcgttaggttcatgaaccaagttcaac 19853055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 9222273 - 9222138
Alignment:
Q  5 agttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcga 101  Q
    ||||||||||||| |||||| |||||||  |||||||| || |||||||||| ||||||| ||   ||||| ||||||||| ||  ||||   |||||||    
T  9222273 agttcaagttcaattcatttatttaacgagcttaatttacaactcaagttcgactcatttggt--gtgaaccaagttcaacgaaccaattgtcgaatcga 9222176  T
Q  102 atctcgaactattttcgaactggtacggttcactgcca 139  Q
     | |||||||||||||||  |||| ||||||| |||||    
T  9222175 gtatcgaactattttcgagttggttcggttcattgcca 9222138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 22721328 - 22721403
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaa 84  Q
    ||||||||||||||||| ||||||| |||||||||| |||| ||||| | ||| ||| |||||||||| ||||||||    
T  22721328 tcaagttcaactcatttatttaacgaacttaatttt-agcttaagtttgcctcgtttggttcatgaaccaagttcaa 22721403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 145
Target Start/End: Complemental strand, 50147032 - 50146918
Alignment:
Q  34 acttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatctcgaactattttcgaactggtacggt 130  Q
    |||||||||||||||||||| ||  |||||| |||||||||| ||||||||| ||| ||||   |||||||||  |||||| |  ||||| |||| ||||    
T  50147032 acttaattttcagctcaagtccggttcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacgaactttaatcgaattggttcggt 50146933  T
Q  131 tcactgccagcccta 145  Q
    ||| ||| |||||||    
T  50146932 tcattgctagcccta 50146918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 43387265 - 43387308
Alignment:
Q  5 agttcaagttcaactcatttgtttaacggacttaattttcagct 48  Q
    |||||||||||| ||||||||||||||||| |||||||||||||    
T  43387265 agttcaagttcagctcatttgtttaacggatttaattttcagct 43387308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 45674835 - 45674975
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    |||||||||||||||||  |||||| | |||||||||||||||||| |  ||| ||  |||||||||| |||||| ||  ||||   || || ||||||     
T  45674835 tcaagttcaactcatttaattaacgaatttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcgacggattagatatcgagtcgaatg 45674934  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||  ||||  |||| ||||||| |||||||||||    
T  45674935 tcgaactataatcgagttggttcggttcattgccagcccta 45674975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 48977576 - 48977716
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    ||||||||| |||||||  |||||| | ||||||||||||||| || |  ||||||  |||||||||| ||||||||| |||||   || || ||||||     
T  48977576 tcaagttcagctcatttaattaacgaatttaattttcagctcatgtccagctcattaggttcatgaacgaagttcaacgaattaaatatcgagtcgaatg 48977675  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    ||||| |||  ||||  |||| ||||||| |||||||||||    
T  48977676 tcgaattataatcgagttggttcggttcattgccagcccta 48977716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 49405775 - 49405635
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||||  ||||||| ||| |||  ||||||||||   ||||||||| ||||||| |||||| ||| ||||||||| ||| ||||   ||||||| |     
T  49405775 tcaagttcggctcatttatttgacgagcttaattttcgattcaagttcgactcatttggttcataaaccaagttcaacgaatcaattaccgaatcgagtt 49405676  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    ||||||||||||||   |||| ||||||| || ||||||||    
T  49405675 tcgaactattttcgggttggttcggttcattgtcagcccta 49405635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 53369872 - 53370012
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| |  ||| ||  |||||||||| |||||||||  ||||   || || | ||||     
T  53369872 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagttgaatg 53369971  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||  ||||  |||| ||||||| |||||||||||    
T  53369972 tcgaactataatcgagttggttcggttcattgccagcccta 53370012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 21441581 - 21441658
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaac 85  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| |  ||| ||  |||||||||| |||||||||    
T  21441581 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 21441658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 27891386 - 27891473
Alignment:
Q  7 ttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    ||||| |||| ||||||| ||||||  | || |||||||||||||||||  ||||||| |||||||||| ||||||||| | |||||||    
T  27891386 ttcaaattcagctcatttatttaacaaatttgattttcagctcaagttcagctcattt-gttcatgaaccaagttcaacgagttaattg 27891473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 34718152 - 34718216
Alignment:
Q  21 atttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaac 85  Q
    |||| ||||||| | ||||||||||||| ||||||| |||||||||||||| ||| || ||||||    
T  34718152 atttatttaacgaaattaattttcagctgaagttcgactcatttagttcataaaccaaattcaac 34718216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 52733838 - 52733775
Alignment:
Q  10 aagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaa 74  Q
    |||||||||| |||| ||||||| |||||||||||||||||| |||  ||||||| |||||||||    
T  52733838 aagttcaacttatttatttaacgaacttaattttcagctcaa-ttcaactcatttggttcatgaa 52733775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 15697227 - 15697136
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    ||||||| ||||| ||||||   |||||| |||||||||| |||||||||||  || |||| |||||||||  ||||||||| ||| |||||    
T  15697227 tagttcatgttcagctcattaagttaacgaacttaatttttagctcaagttcagcttatttggttcatgaatcaagttcaacgaatcaattg 15697136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 43812201 - 43812110
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    ||||||||||||| |||| ||  || ||| ||||||||||||| | ||||||| | ||||| |||||||||| |||||| || ||| |||||    
T  43812201 tagttcaagttcagctcaattagtttacgaacttaattttcagtttaagttcggcccatttggttcatgaaccaagttcgacgaatcaattg 43812110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 50710913 - 50710843
Alignment:
Q  5 agttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaac 75  Q
    |||| |||||||||| |||| |||||||  ||||||||||| ||||| |||| |||||||  |||||||||    
T  50710913 agtttaagttcaacttatttatttaacgagcttaattttcaactcaatttcgactcatttgattcatgaac 50710843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 13761825 - 13761886
Alignment:
Q  34 acttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    |||||||||||||||||| |||  ||||||| |||||||||| |||| |||| | |||||||    
T  13761825 acttaattttcagctcaaattcagctcatttggttcatgaaccaagtccaacgagttaattg 13761886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 32397845 - 32397764
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttc 82  Q
    |||||||||||||||| |||| ||  || ||| |||||||||| || ||||||||| || ||||  ||||||||| ||||||    
T  32397845 atatagttcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggcttatttgattcatgaaccaagttc 32397764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 49820982 - 49821059
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaac 85  Q
    ||||||||| |||||||  |||||| ||||||||||||||| |||| |  ||| ||  |||||||||| |||||||||    
T  49820982 tcaagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgttaggttcatgaaccaagttcaac 49821059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 53369688 - 53369733
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagt 53  Q
    ||||||||| |||||||  |||||| ||||||||||||||||||||    
T  53369688 tcaagttcagctcatttaattaacgaacttaattttcagctcaagt 53369733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 133
Target Start/End: Complemental strand, 9874306 - 9874220
Alignment:
Q  50 aagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatctcgaactattttcgaactggtacggttca 133  Q
    ||||||| ||||||| ||||||| || || |||||| ||||||||   ||||||||||| |||||||||| ||  |||| |||||||    
T  9874306 aagttcggctcatttggttcatgtaccaatttcaacgaattaattactgaatcgaatcttgaactatttttgagttggttcggttca 9874220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 12710702 - 12710842
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    |||||||| |||||||| |||||||  ||||||||||| |||||||||| ||||||| |||||||||| ||||||||| | | ||||   ||||||||||    
T  12710702 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatc 12710801  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||||||||  |||| ||||||| |||||||||||    
T  12710802 tcgaactattttcgagttggttcggttcattgccagcccta 12710842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 9505261 - 9505121
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||||  ||||||| |||||||||| ||||||||| | ||||||   ||||||| |     
T  9505261 tcaagttcagctcatttatttaacgaacttaattttcagctcaagttcaactcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtt 9505162  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
     ||||||||| ||||  |||| ||||||| |||||||||||    
T  9505161 ccgaactattgtcgagttggttcggttcattgccagcccta 9505121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 52199429 - 52199516
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||  ||| ||| |||||||||| ||||||||| |||||||||    
T  52199429 tcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgaattaattg 52199516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 39942940 - 39942832
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||||| ||||| | ||||||| ||||||||||||||||||||||  |||||| ||||||||||| |||||||||| |||||||   |||||||||     
T  39942940 tcaagttcagctcatctatttaacgaacttaattttcagctcaagttcagctcattaagttcatgaaccaagttcaacagattaattgccgaatcgaatt 39942841  T
Q  105 tcgaactat 113  Q
    |||||||||    
T  39942840 tcgaactat 39942832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 26049680 - 26049541
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    |||||||| ||| |||| |||||||  ||||||||||| |||||||||| |||||||  ||||||||| ||||||||||  | ||||   ||||||||||    
T  26049680 tcaagttcgactaatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaacaggtcaattatcgaatcgaatc 26049581  T
Q  105 tcgaactattttcgaactggtacggttcactgccagccct 144  Q
    || ||||||||||||  |||| ||||||| ||||||||||    
T  26049580 tcaaactattttcgagttggttcggttcattgccagccct 26049541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 20550346 - 20550228
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcg 100  Q
    |||||||||| |||||||||| ||||||| | |||||||||| |||| ||||| ||||||| |||| ||||| ||||||||||||| ||||   ||||||    
T  20550346 tagttcaagtacaactcatttatttaacgaatttaattttcaactcatgttcgactcatttggttcgtgaaccaagttcaacaaatcaattatcgaatcg 20550247  T
Q  101 aatctcgaactattttcga 119  Q
    | | |||||||||||||||    
T  20550246 agtatcgaactattttcga 20550228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 30662271 - 30662131
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    |||||||| |||||||| |||||||  ||||||||||| |||||||||| |||||||  ||||||||| ||||||||| | | ||||   ||||||||||    
T  30662271 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaacgagtcaattatcgaatcgaatc 30662172  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    || ||||||||||||  |||| ||| ||| || ||||||||    
T  30662171 tcaaactattttcgagttggttcggctcattgtcagcccta 30662131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 39135348 - 39135430
Alignment:
Q  2 tatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaa 84  Q
    ||||||| ||||||| |||||||  |||||| ||||||||||||||||||||||| ||||||| |||||||||| ||||||||    
T  39135348 tatagtttaagttcagctcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaa 39135430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 46293359 - 46293277
Alignment:
Q  2 tatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaa 84  Q
    ||||||| |||||||||||||||  |||||| ||||||||||||||||||||||| ||||||| |||||||||| || |||||    
T  46293359 tatagtttaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaaattcaa 46293277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 145
Target Start/End: Original strand, 40943558 - 40943701
Alignment:
Q  5 agttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcga 101  Q
    |||||||||||||||||||| |||||||  ||||||||||| |||||||||| ||||||| |||||||||| |||| |||  ||  ||||    ||||||    
T  40943558 agttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcaaatcga 40943657  T
Q  102 atctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
     | |||||||||||||||  |||| ||||| | |||||||||||    
T  40943658 gtatcgaactattttcgagttggttcggtttattgccagcccta 40943701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 54393590 - 54393443
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaa 97  Q
    |||||||||||||||  |||| || ||| ||| ||||||||||||||||||||||| ||||||| ||| |||||| ||||||||| ||| ||||   |||    
T  54393590 atatagttcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcatttggtttatgaaccaagttcaacgaatcaattgtcgaa 54393491  T
Q  98 tcgaatctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    ||||||  |||||| |  ||||  |||| ||||||| |||||||||||    
T  54393490 tcgaattacgaactttaatcgagttggttcggttcattgccagcccta 54393443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 54432334 - 54432259
Alignment:
Q  5 agttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagt 80  Q
    |||||||||||||||||||| |||||||  ||||||||| | |||||||||| |||||||||||||||||| ||||    
T  54432334 agttcaagttcaactcatttatttaacgagcttaatttttaactcaagttcgactcatttagttcatgaaccaagt 54432259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 5418678 - 5418764
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||||||||||||||  |||||| ||||||| || |||||||||||| ||| ||| |||||||||| |||||||||||| |||||    
T  5418678 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcgactcgtttggttcatgaactaagttcaacaaactaatt 5418764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 26136337 - 26136442
Alignment:
Q  12 gttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatctcga 108  Q
    ||||||||||||||||||||  || ||||||| | |||||||||| |||| ||||||||| ||| |||||||||||| |||||   ||||||| |||| |    
T  26136337 gttcaactcatttgtttaacaaacataattttgaactcaagttcggctcacttagttcataaaccaagttcaacaaactaattaacgaatcgagtctcaa 26136436  T
Q  109 actatt 114  Q
    ||||||    
T  26136437 actatt 26136442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 52934805 - 52934888
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaa 84  Q
    |||||| ||||||||  ||||||| ||||||| ||||||||||| ||||||||||  ||||||| |||||||||| ||||||||    
T  52934805 atatagatcaagttcggctcatttatttaacgaacttaattttctgctcaagttcagctcatttggttcatgaaccaagttcaa 52934888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 25253695 - 25253781
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaa 87  Q
    |||||| | ||||||  ||||||| ||||||| |||||||||| |||||||||||  ||||||| |||||||||| |||||||||||    
T  25253695 atatagcttaagttcggctcatttatttaacgaacttaatttttagctcaagttcagctcatttggttcatgaaccaagttcaacaa 25253781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 33438878 - 33438784
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    ||||||||||| || | |||| ||  || ||| ||||||||||||||||||||||| ||||||| |||||||||| ||||||||| ||| |||||    
T  33438878 atatagttcaactttagctcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcaacgaatcaattg 33438784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 39469677 - 39469595
Alignment:
Q  2 tatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaa 84  Q
    |||| |||||||| | |||||||  |||||| ||||||||||||||||||||||| |||||||  ||||||||| ||||||||    
T  39469677 tataattcaagtttagctcatttaattaacgaacttaattttcagctcaagttcggctcatttgattcatgaaccaagttcaa 39469595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 52199389 - 52199445
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcattt 64  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||  |||||||    
T  52199389 tcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcattt 52199445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 19560914 - 19560774
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||||  ||||||| |||||||||||||| | | | |||||||||  ||  ||| |||||||||| ||||||||| ||||||||   || ||||||     
T  19560914 tcaagttcggctcatttatttaacggacttaactcttaactcaagttcagcttgtttcgttcatgaaccaagttcaacgaattaattgtcgagtcgaatt 19560815  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
     |||||||| |||||  |||| ||||||| |||||||||||    
T  19560814 ccgaactatattcgagttggttcggttcattgccagcccta 19560774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 18074569 - 18074662
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||| |||| |||| |||||||  |||||| ||||||||||||| |||| |||  |||||||||||||||||  || |||||| ||||||||    
T  18074569 atatagctcaatttcagctcatttagttaacgaacttaattttcagttcaaattcaactcatttagttcatgaaacaaattcaacgaattaatt 18074662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 28242583 - 28242670
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    |||||||||  |||||| ||||||| | |||||||||||||||| |||  ||||||| |||||||||| || |||||| | |||||||    
T  28242583 tcaagttcagatcatttatttaacgaatttaattttcagctcaaattcagctcatttggttcatgaaccaaattcaacgagttaattg 28242670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 120
Target Start/End: Complemental strand, 15822490 - 15822374
Alignment:
Q  7 ttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaat 103  Q
    |||||||||  ||||||| ||| |||  ||||||||||| |||||||||  |||| || | |||||||| ||||||||| ||  ||||   |||||||||    
T  15822490 ttcaagttcggctcatttatttgacgagcttaattttcaactcaagttctactcaattggatcatgaaccaagttcaacgaaacaattaccgaatcgaat 15822391  T
Q  104 ctcgaactattttcgaa 120  Q
     ||||||||||||||||    
T  15822390 ttcgaactattttcgaa 15822374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 32689169 - 32689309
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| |  ||| ||  |||||||||| |||||||||  ||||   || || ||||||     
T  32689169 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatg 32689268  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||  ||||  |||| ||||||| || ||||||||    
T  32689269 tcgaactataatcgagttggttcggttcattgtcagcccta 32689309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 41609888 - 41609965
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaac 85  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| |  ||| ||  |||||||||| |||||||||    
T  41609888 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 41609965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 1674629 - 1674708
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaa 87  Q
    ||||||||| || |||| ||||||  ||  ||||||||||| ||||||  ||||||| |||||||||| |||||||||||    
T  1674629 tcaagttcagcttatttatttaacatacaaaattttcagcttaagttcaactcatttggttcatgaaccaagttcaacaa 1674708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 50965396 - 50965471
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaatttt-cagctcaagttcgtctcatttagttcatgaac 75  Q
    |||||| ||||||||| ||||||| ||||||| |||||||||| |||||||| |||  ||||||  ||||||||||    
T  50965396 atatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaac 50965471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 51068531 - 51068606
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaatttt-cagctcaagttcgtctcatttagttcatgaac 75  Q
    |||||| ||||||||| ||||||| ||||||| |||||||||| |||||||| |||  ||||||  ||||||||||    
T  51068531 atatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaac 51068606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 23206422 - 23206364
Alignment:
Q  34 acttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaa 92  Q
    |||||||||||||||||||| |  ||| ||  ||||||||||||||||||||| |||||    
T  23206422 acttaattttcagctcaagtccagctcgttaggttcatgaacaaagttcaacagattaa 23206364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 28700997 - 28701063
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaa 74  Q
    ||||||||||||||||| ||||||| | ||||||||||| |||| |||  || |||| |||||||||    
T  28700997 tcaagttcaactcatttttttaacgaatttaattttcagttcaacttcaacttatttggttcatgaa 28701063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 33692039 - 33691969
Alignment:
Q  25 gtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    |||||||| ||||| | || ||||||||||| | |||||||||| |||||| || |||||||||| |||||    
T  33692039 gtttaacgaacttactcttaagctcaagttcatttcatttagtttatgaaccaaattcaacaaatcaattg 33691969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 53529737 - 53529683
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttc 55  Q
    |||||||||||||||| |||| ||  || ||| ||||||||||||||||||||||    
T  53529737 atatagttcaagttcagctcaattagttgacgaacttaattttcagctcaagttc 53529683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 50447336 - 50447482
Alignment:
Q  3 atagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatc 99  Q
    |||||||||||||||||||||| ||||||| |||||||||| || ||||||||| ||||||| |||||| ||| ||||| ||| ||||||||   |||||    
T  50447336 atagttcaagttcaactcatttatttaacgaacttaattttaagttcaagttcggctcatttggttcataaaccaagtttaacgaattaattatcgaatc 50447435  T
Q  100 gaatctcgaactattttcgaactggtacggttcactgccagccctat 146  Q
    || |||||||||||||||||  ||||  |||||| || |||||||||    
T  50447436 gagtctcgaactattttcgagttggtttggttcattgtcagccctat 50447482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 28006350 - 28006490
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    |||||||| |||||||| |||||||  ||||||||||| |||||||||| ||||||| |||||||||| ||||||||| | | ||||   ||||||||||    
T  28006350 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatc 28006449  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||||||||  |||| ||||||| |||| ||||||    
T  28006450 tcgaactattttcgagttggttcggttcattgccggcccta 28006490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 24575909 - 24576051
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    |||||||| |||||||| ||||||   ||||||||||| ||||||||||| |||||| |||||||||| ||||||||| | | ||||   ||||| ||||    
T  24575909 tcaagttcgactcatttatttaacaagcttaattttcaactcaagttcgtttcatttggttcatgaaccaagttcaacgagtcaattatcgaatcaaatc 24576008  T
Q  105 tcgaactattttcgaactggtacggttcactgccagccctatg 147  Q
    |||||||||||||||  |||| ||||||| || ||||||||||    
T  24576009 tcgaactattttcgagttggttcggttcattgtcagccctatg 24576051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 27076660 - 27076569
Alignment:
Q  3 atagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||||||||||||||| ||| ||||||| |||||| ||| |||||||||||| ||||||||||||||| || ||||||||| ||||||||    
T  27076660 atagttcaagttcaactcgtttatttaacgaacttaactttgagctcaagttcggctcatttagttcatggaccaagttcaacgaattaatt 27076569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 145
Target Start/End: Complemental strand, 39802912 - 39802767
Alignment:
Q  3 atagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatc 99  Q
    |||| ||||||||  ||||||| ||||||| |||||||||||| |||||||||| ||||||| |||||||||| | ||||||| |||||| |   ||| |    
T  39802912 atagctcaagttcggctcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccatgttcaacgaattaactgccgaacc 39802813  T
Q  100 gaatctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    || |||||||||||||||||  |||| || |||| |||||||||||    
T  39802812 gagtctcgaactattttcgagttggttcgattcattgccagcccta 39802767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 7 - 119
Target Start/End: Complemental strand, 5204610 - 5204495
Alignment:
Q  7 ttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaat 103  Q
    ||||||||| |||||||| ||||||| |||||||||||| |||||||||| ||||||| ||||| |||| ||||||||| | | ||||   |||||||||    
T  5204610 ttcaagttcgactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcacgaaccaagttcaacgagtcaattatcgaatcgaat 5204511  T
Q  104 ctcgaactattttcga 119  Q
    ||| ||||||||||||    
T  5204510 ctcaaactattttcga 5204495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 35810711 - 35810858
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaa 97  Q
    |||||||||||||||  |||| || ||| ||| ||||||||||||||||||||||| ||||||| |||||||||| ||||||||| ||| ||||   |||    
T  35810711 atatagttcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaacgaatcaattgtcgaa 35810810  T
Q  98 tcgaatctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    ||||||  |||||| |  ||||  |||| ||||||| |||||||||||    
T  35810811 tcgaattacgaactttaatcgagttggttcggttcattgccagcccta 35810858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 40159773 - 40159636
Alignment:
Q  5 agttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcga 101  Q
    |||||||||||||||||||| ||||||| |||||||||||| |||||||||| |||||||  ||||||||| |||| |||  ||  ||||   |||||||    
T  40159773 agttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttgattcatgaaccaagtccaatgaaccaattatcgaatcga 40159674  T
Q  102 atctcgaactattttcgaactggtacggttcactgcca 139  Q
    || || ||||||||||||  |||| ||||||| |||||    
T  40159673 atatcaaactattttcgagttggttcggttcattgcca 40159636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 145
Target Start/End: Complemental strand, 29677663 - 29677519
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcg 100  Q
    ||||||||||||| ||||||| ||||| |  ||||||||||| |||||||||| ||||||| |||| ||||| ||||||||| ||  ||||    |||||    
T  29677663 tagttcaagttcagctcatttatttaaagagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaaccaattatcaaatcg 29677564  T
Q  101 aatctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    | | |||||||||||||||  |||| ||||||| |||||||||||    
T  29677563 agtatcgaactattttcgagttggttcggttcattgccagcccta 29677519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 145
Target Start/End: Complemental strand, 38061322 - 38061178
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcg 100  Q
    ||||||||||||||||||||| |||||||  ||||||||| | || ||||||| ||||||  |||||| ||  ||||||||| ||| ||||    |||||    
T  38061322 tagttcaagttcaactcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcataaatcaagttcaacgaatcaattatcaaatcg 38061223  T
Q  101 aatctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    ||||||| |||||||||||  |||| ||||||| |||||||||||    
T  38061222 aatctcgcactattttcgagttggttcggttcattgccagcccta 38061178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 46265091 - 46265010
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttc 82  Q
    |||||||||||||||| |||| ||  ||| || ||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  46265091 atatagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttagttcatgaaccaagttc 46265010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 146
Target Start/End: Original strand, 47983257 - 47983396
Alignment:
Q  10 aagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatctc 106  Q
    ||||||||||||||| |||||||   |||  ||| | |||||||||| ||||||| |||| ||||| ||||||||||||| ||||   ||||||||||||    
T  47983257 aagttcaactcatttatttaacgagtttagattttaactcaagttcgactcatttggttcgtgaaccaagttcaacaaatcaattatcgaatcgaatctc 47983356  T
Q  107 gaactattttcgaactggtacggttcactgccagccctat 146  Q
    |||||||||||||  |||| ||||||| || || ||||||    
T  47983357 gaactattttcgagttggttcggttcattgtcaaccctat 47983396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 31869594 - 31869681
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    ||||||||  ||||||| ||||||| ||||||||||||||| ||||||| ||||||| |||||||||| ||||||||| | |||||||    
T  31869594 tcaagttcggctcatttatttaacgaacttaattttcagcttaagttcggctcatttggttcatgaaccaagttcaacgatttaattg 31869681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 23915737 - 23915660
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaac 85  Q
    ||||||||||||||||| ||||| | ||||||||||||||| ||||||  ||||||| |||||||||| |||||||||    
T  23915737 tcaagttcaactcatttatttaatgaacttaattttcagctaaagttcagctcatttggttcatgaaccaagttcaac 23915660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 12224684 - 12224575
Alignment:
Q  39 attttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatctcgaactattttcgaactggtacggttcact 135  Q
    |||||||||||||||||| ||||||| |||||||||| ||||||||| | ||||||   |||||||||  ||||||||| ||||  |||| ||||||| |    
T  12224684 attttcagctcaagttcggctcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgaattccgaactattgtcgagttggttcggttcatt 12224585  T
Q  136 gccagcccta 145  Q
    | ||||||||    
T  12224584 gtcagcccta 12224575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 15257314 - 15257239
Alignment:
Q  5 agttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagt 80  Q
    ||||||| |||||||||||| |||||||  ||||||||||| |||||||||| ||||||| |||||||||| ||||    
T  15257314 agttcaaattcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagt 15257239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 145
Target Start/End: Original strand, 44596524 - 44596657
Alignment:
Q  15 caactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatctcgaact 111  Q
    |||||||||| ||||||| ||||||||||||| ||||||||  ||||||| |||||||||| || |||||| | ||||||   ||||||| |  | ||||    
T  44596524 caactcatttatttaacgaacttaattttcagttcaagttcagctcatttggttcatgaaccaaattcaacgagttaattgtcgaatcgagttccaaact 44596623  T
Q  112 attttcgaactggtacggttcactgccagcccta 145  Q
    ||| ||||  |||| ||||||| |||||||||||    
T  44596624 attgtcgagttggttcggttcattgccagcccta 44596657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 15306493 - 15306633
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||||  ||||||| ||||| | ||||||||||| ||||||||||  ||||||| |||||||||| ||||||||  ||||||||   ||||||| |     
T  15306493 tcaagttcggctcatttatttaatgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatgaattaattatcgaatcgagtt 15306592  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
     ||||||||| || |  |||| ||||||| |||||||||||    
T  15306593 ccgaactattgtcaagttggttcggttcattgccagcccta 15306633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 21680776 - 21680656
Alignment:
Q  28 taacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatctcgaactattttcgaactgg 124  Q
    ||||| |||||||||| |||||||||||| |||||||  ||||| ||| ||||||||| |  |||||   ||||||| | ||||||||||||||| ||||    
T  21680776 taacgaacttaatttttagctcaagttcggctcatttcattcataaaccaagttcaacgagataattatcgaatcgagtttcgaactattttcgagctgg 21680677  T
Q  125 tacggttcactgccagcccta 145  Q
    | ||||||| ||||| |||||    
T  21680676 ttcggttcattgccaacccta 21680656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 25125032 - 25124884
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaa 97  Q
    |||||| ||||||||| |||| ||  || ||| | ||||||||||||||||||||| ||||||| |||||||||| ||||||||| ||| ||||    ||    
T  25125032 atatagctcaagttcagctcaattagttcacgaaattaattttcagctcaagttcggctcatttggttcatgaaccaagttcaacgaatcaattatcaaa 25124933  T
Q  98 tcgaatctcgaactattttcgaactggtacggttcactgccagccctat 146  Q
    ||||||  |||||| |  ||||  |||| ||||||| ||||||||||||    
T  25124932 tcgaattacgaactttaatcgagttggttcggttcattgccagccctat 25124884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 43087606 - 43087520
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||||||||||||||  |||||| ||||||| || || ||||||||| ||| ||| |||||||||| |||||||||||| |||||    
T  43087606 tcaagttcaactcatttaattaacgaacttaatctttagttcaagttcggctcgtttggttcatgaaccaagttcaacaaactaatt 43087520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 7596386 - 7596467
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttc 82  Q
    |||||||||||||||| |||| ||  ||| || ||||||||||||||||||||||| ||||||| |||||| ||| ||||||    
T  7596386 atatagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcataaaccaagttc 7596467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 14578699 - 14578638
Alignment:
Q  34 acttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    |||||||||||||||| |||||| ||||||| |||||||||| ||||||||||||| |||||    
T  14578699 acttaattttcagctccagttcggctcatttggttcatgaaccaagttcaacaaatcaattg 14578638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 42916261 - 42916180
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttc 82  Q
    |||| ||||||||||| |||| ||  ||| || ||||||||||||||||||||||| ||||||| |||||||||| ||||||    
T  42916261 atatggttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttc 42916180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 146
Target Start/End: Original strand, 7995970 - 7996112
Alignment:
Q  7 ttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaat 103  Q
    |||||||| | ||||||| |||||||  ||||||||| | || ||||||| ||||||  ||| |||||| ||||||||| ||| ||||   |||||||||    
T  7995970 ttcaagttgagctcatttatttaacgagcttaattttaaacttaagttcgactcattaggtttatgaaccaagttcaacgaatcaattatcgaatcgaat 7996069  T
Q  104 ctcgaactattttcgaactggtacggttcactgccagccctat 146  Q
    |||||||||||||| |  |||| ||||||| || || ||||||    
T  7996070 ctcgaactattttcaagttggttcggttcattgtcaaccctat 7996112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 45653578 - 45653457
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaa 97  Q
    |||||||||| |||||  ||||||   ||||| |||||| ||| |||||||||||| ||||||| |||||||||| ||||||||| || |||||   |||    
T  45653578 atatagttcatgttcagttcatttagctaacgaacttaacttttagctcaagttcggctcatttggttcatgaaccaagttcaacgaaataattgtcgaa 45653479  T
Q  98 tcgaatctcgaactattttcga 119  Q
    |||| | | |||||||||||||    
T  45653478 tcgagttttgaactattttcga 45653457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 19508528 - 19508614
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    ||||| |||||||||||  |||||| ||||||| || |||||||||||| ||| ||| |||||||||| ||||||||| || |||||    
T  19508528 tcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaatt 19508614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 24469957 - 24469817
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| |  ||| ||  |||||||||| |||||||||  ||||   || || ||||||     
T  24469957 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 24469858  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||  ||||  |||| ||||||| |||||||||||    
T  24469857 tcgaactataatcgagttggttcggttcattgccagcccta 24469817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 32179858 - 32179998
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| |  ||||||  ||| |||||| |||||||||  ||||   || || ||||||     
T  32179858 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggtttatgaaccaagttcaacggattaaatatcgagtcgaatg 32179957  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||  ||||  |||| ||||||| |||||||||||    
T  32179958 tcgaactataatcgagttggttcggttcattgccagcccta 32179998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 45581144 - 45581008
Alignment:
Q  12 gttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatctcga 108  Q
    ||||| |||||||  |||| | ||||||||||| ||||||||||  ||||||| |||||||||| ||||||||| |  |||||   ||||||| | ||||    
T  45581144 gttcatctcatttagttaatgaacttaattttccgctcaagttcaactcatttggttcatgaaccaagttcaacgagataattatcgaatcgagtttcga 45581045  T
Q  109 actattttcgaactggtacggttcactgccagcccta 145  Q
    ||||||||| |  |||| ||||||| || ||||||||    
T  45581044 actattttcaagttggttcggttcattgtcagcccta 45581008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 48575220 - 48575134
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    ||||||||||||||||| ||| ||| |||||||||| |  |||||||||  || ||| |||||||||| ||||||||| ||||||||    
T  48575220 tcaagttcaactcatttatttgacgaacttaattttaaattcaagttcgattcgtttggttcatgaaccaagttcaacgaattaatt 48575134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 6413272 - 6413379
Alignment:
Q  41 tttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg---aatcgaatctcgaactattttcgaactggtacggttcactgc 137  Q
    ||||| ||||||||||  |||||| |||||||||| | ||||||| ||| ||||    ||||||||||||||||||||||||  |||| || |||| |||    
T  6413272 tttcaactcaagttcgattcatttggttcatgaaccaggttcaacgaatcaattatcaaatcgaatctcgaactattttcgagttggttcgattcattgc 6413371  T
Q  138 cagcccta 145  Q
    ||||||||    
T  6413372 cagcccta 6413379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 7016222 - 7016075
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaa 97  Q
    |||||| ||||| ||| || ||| | |||||  ||||| |||| |||||||||||  ||||||| |||||||||| ||||||||||||| ||||   |||    
T  7016222 atatagctcaagctcagcttattaggttaacaaacttagttttgagctcaagttcagctcatttggttcatgaaccaagttcaacaaatcaattgtcgaa 7016123  T
Q  98 tcgaatctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||| ||||||| | | |||||  |||| ||||||| || ||||||||    
T  7016122 tcgagtctcgaattttgttcgagttggttcggttcattgtcagcccta 7016075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 145
Target Start/End: Original strand, 7956321 - 7956464
Alignment:
Q  5 agttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcga 101  Q
    |||||||||||||||||||| ||||||   |||||||||||  ||||||||| || |||| |||||||||| |||| |||  ||  ||||   |||| ||    
T  7956321 agttcaagttcaactcatttatttaacaagcttaattttcaattcaagttcgactaattttgttcatgaaccaagtccaatgaaccaattatcgaattga 7956420  T
Q  102 atctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
     | |||||||||||||||  |||| ||||||| ||||| |||||    
T  7956421 gtatcgaactattttcgagttggttcggttcattgccaacccta 7956464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 20349139 - 20349232
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    ||||||||||| |||| |||||||  |||||| |||||||||||| || ||||||| ||||||| ||  |||||  ||||||||| ||||||||    
T  20349139 atatagttcaaattcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatcaagttcaacgaattaatt 20349232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 20347659 - 20347753
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    ||||||| ||| |||| |||||||  |||||| |||||||||||| || ||||||| ||||||| || ||||||  || |||||| |||||||||    
T  20347659 atatagtacaaattcagctcatttaattaacgaacttaattttcatcttaagttcggctcatttggtacatgaatcaaattcaacgaattaattg 20347753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 36419101 - 36419241
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    ||||||||| |||||||  |||||| ||||||||||| |||||||| |  ||||||  |||||||||| |||||| ||  ||||   || || ||||||     
T  36419101 tcaagttcagctcatttaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcgacggattaaatatcgagtcgaatg 36419200  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||  ||||  |||| ||||||| |||||||||||    
T  36419201 tcgaactataatcgagttggttcggttcattgccagcccta 36419241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 47603002 - 47602862
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| |  ||| ||  |||||||||| |||||||||  ||||   || || ||||||     
T  47603002 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 47602903  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||  ||||  |||| ||||||| || ||||||||    
T  47602902 tcgaactataatcgagttggttcggttcattgtcagcccta 47602862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 14796581 - 14796674
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||||  ||||||||||||||| ||||||| |||||||||  || ||||||||  || | || |||||||||| | ||||||| ||||||||    
T  14796581 atatagtcaaagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaattaatt 14796674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 14805455 - 14805548
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||||  ||||||||||||||| ||||||| |||||||||  || ||||||||  || | || |||||||||| | ||||||| ||||||||    
T  14805455 atatagtcaaagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaattaatt 14805548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 37441326 - 37441249
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaac 85  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| |  ||| ||  |||||||||| |||||||||    
T  37441326 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 37441249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 40002887 - 40002960
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaa 74  Q
    |||||| |||||||||||||| ||  || ||| |||||||||||| |||||||||| |||||||  ||||||||    
T  40002887 atatagctcaagttcaactcaattagttgacgaacttaattttcaactcaagttcggctcatttgattcatgaa 40002960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 145
Target Start/End: Original strand, 7702837 - 7702975
Alignment:
Q  10 aagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatctc 106  Q
    ||||||| |||||||  |||||| |||||||||||||||||||| |  ||| ||   ||||||||| |||||||||  ||||   || || |||||| ||    
T  7702837 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttagcttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 7702936  T
Q  107 gaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||  ||||  |||| ||||||| |||||||||||    
T  7702937 gaactataatcgagttggttcggttcattgccagcccta 7702975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 15662975 - 15663023
Alignment:
Q  34 acttaattttcagctcaagttcgtctcatttagttcatgaacaaagttc 82  Q
    ||||||||||||||||||||||| ||||||| || ||||||| ||||||    
T  15662975 acttaattttcagctcaagttcggctcatttggtacatgaaccaagttc 15663023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 42937069 - 42937161
Alignment:
Q  3 atagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    |||| ||||||||| |||| ||  || ||| |||||||||| |||||||||||| |||||||  ||||||||| |||||| || ||| |||||    
T  42937069 atagctcaagttcagctcaattagttgacgaacttaattttaagctcaagttcggctcatttgattcatgaaccaagttcgacgaatcaattg 42937161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 8828366 - 8828319
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttc 55  Q
    |||||||||||| ||||  ||||| |||||||||||||||||||||||    
T  8828366 tcaagttcaacttatttagttaacagacttaattttcagctcaagttc 8828319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 133
Target Start/End: Original strand, 31816568 - 31816696
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||||  ||||||| ||| |||  ||||||||||  || ||||||  ||||||| |||||||||| ||||||||| ||| ||||   |||| || |     
T  31816568 tcaagttcggctcatttatttgacgagcttaattttcgactgaagttcaactcatttggttcatgaaccaagttcaacgaatcaattaccgaattgagtt 31816667  T
Q  105 tcgaactattttcgaactggtacggttca 133  Q
    |||||||||||||||  |||| |||||||    
T  31816668 tcgaactattttcgagttggttcggttca 31816696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 13645320 - 13645247
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagtt 81  Q
    |||| ||||||||||||  |||||| ||||||| || |||||||||||| ||| |||  ||||||||| |||||    
T  13645320 tcaaattcaactcatttacttaacgaacttaatctttagctcaagttcggctcgtttgattcatgaaccaagtt 13645247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 23916810 - 23916883
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagtt 81  Q
    ||||||||| |||| ||  || ||| ||||||||||||||||||||| | ||||||| ||| |||||| |||||    
T  23916810 tcaagttcagctcaattagttgacgaacttaattttcagctcaagttaggctcatttggttaatgaaccaagtt 23916883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 74
Target Start/End: Original strand, 15014341 - 15014381
Alignment:
Q  34 acttaattttcagctcaagttcgtctcatttagttcatgaa 74  Q
    |||||||||||| |||||||||| ||||||| |||||||||    
T  15014341 acttaattttcaactcaagttcggctcatttggttcatgaa 15014381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 30251443 - 30251491
Alignment:
Q  27 ttaacggacttaattttcagctcaagttcgtctcatttagttcatgaac 75  Q
    |||||| |||||||||| |||||||||||   |||||||||||||||||    
T  30251443 ttaacgaacttaatttttagctcaagttcaattcatttagttcatgaac 30251491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 4e-26; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 3801510 - 3801364
Alignment:
Q  2 tatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaat 98  Q
    |||||||||||||||||||||||  |||||| ||||||||||||||||||||||| ||||||| |||||||||| ||||||||  ||  ||||   || |    
T  3801510 tatagttcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagt 3801411  T
Q  99 cgaatctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||  |||||||| |||||  |||| ||||||| |||||||||||    
T  3801410 cgaattacgaactatattcgagttggttcggttcattgccagcccta 3801364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 27450725 - 27450580
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcg 100  Q
    ||||||||||||||||||||| |||||||  ||||||||| | |||||||||| ||||||  |||||||||  || |||||| ||| ||||   ||||||    
T  27450725 tagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaaattcaacgaatcaattatcgaatcg 27450626  T
Q  101 aatctcgaactattttcgaactggtacggttcactgccagccctat 146  Q
    ||||||| |||||||||||  |||| ||||||| ||||||||||||    
T  27450625 aatctcgcactattttcgagttggttcggttcattgccagccctat 27450580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 4 - 145
Target Start/End: Complemental strand, 34719801 - 34719657
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcg 100  Q
    ||||||||||||||||||||| |||||||  ||||||||| | |||||||||| |||||| ||||||||||  ||||||||| ||| ||||   |||||     
T  34719801 tagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaagttcatgaatcaagttcaacgaatcaattatcgaatca 34719702  T
Q  101 aatctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    ||||||| |||||||||||  |||| || |||| |||||||||||    
T  34719701 aatctcgcactattttcgagttggttcgtttcattgccagcccta 34719657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 145
Target Start/End: Original strand, 19716179 - 19716318
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattgaatcgaat 103  Q
    |||||||||||||| |||||| |||||||  ||||||||| | || ||||||| ||||||  |||||||||  ||||||||| ||| ||||  |||||||    
T  19716179 tagttcaagttcaattcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcatgaatcaagttcaacgaatcaatt--atcgaat 19716276  T
Q  104 ctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||| |||||||||||  |||| ||||||| |||||||||||    
T  19716277 ctcgcactattttcgagttggttcggttcattgccagcccta 19716318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 145
Target Start/End: Original strand, 39407402 - 39407546
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcg 100  Q
    ||||||||||||||||||||| |||||||  ||||||||| | |||||||||| ||||||  |||||||||  ||||||||| ||| ||||   ||||||    
T  39407402 tagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcg 39407501  T
Q  101 aatctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    ||||||| |||||||| ||  |||| ||||||| | |||||||||    
T  39407502 aatctcgcactatttttgagttggttcggttcattaccagcccta 39407546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 145
Target Start/End: Original strand, 10493981 - 10494125
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaa---attaattgaatcg 100  Q
    ||||||||||||| ||||||| |||||||  ||||||||||| |||||||||| ||||||| |||  ||||| ||||||||| |   | | |||||||||    
T  10493981 tagttcaagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggtttgtgaaccaagttcaacgaaccaattattgaatcg 10494080  T
Q  101 aatctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    ||| || ||||||||| ||  |||| ||||||| |||||||||||    
T  10494081 aatatcaaactatttttgagttggttcggttcattgccagcccta 10494125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 27196077 - 27196217
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||||||||| ||| | |||||  ||||||||||| |||||||||| ||||||| |||||||||| || || ||| ||| ||||   ||||||| ||    
T  27196077 tcaagttcaactcctttatctaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaatttaacgaatcaattatcgaatcgagtc 27196176  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||||||||  |||| ||||||| || ||||||||    
T  27196177 tcgaactattttcgagttggttcggttcattgtcagcccta 27196217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 38523007 - 38522925
Alignment:
Q  2 tatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaa 84  Q
    ||||||||||||||| |||||||  |||||| ||||||||||||||||||||| | ||||||| |||||||||| ||||||||    
T  38523007 tatagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggctcatttggttcatgaaccaagttcaa 38522925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 1840827 - 1840740
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    ||||||||| ||||||| ||| ||| ||||||||||||||||||||||  ||||||| |||||||||| ||||||||| | |||||||    
T  1840827 tcaagttcagctcatttatttcacgaacttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattg 1840740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 26299843 - 26299984
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcg 100  Q
    |||||||||||||| |||||| |||||||  ||||||||| | |||||||| | ||||||  |||||||||  ||||||||| ||| ||||   ||||||    
T  26299843 tagttcaagttcaattcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaatgaagttcaacgaatcaattatcgaatcg 26299942  T
Q  101 aatctcgaactattttcgaactggtacggttcactgccagcc 142  Q
    ||||||| |||||||||||  |||| ||||||| | ||||||    
T  26299943 aatctcgcactattttcgagttggttcggttcatttccagcc 26299984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 145
Target Start/End: Original strand, 26298307 - 26298451
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcg 100  Q
    ||||| ||||||||||||||| |||||||  ||||||||| | |||||||| | ||||||  |||||||||  ||||||||| ||| ||||   ||||||    
T  26298307 tagtttaagttcaactcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcg 26298406  T
Q  101 aatctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    ||||||  |||||||| ||  |||| ||||||| |||||||||||    
T  26298407 aatctcacactatttttgagttggttcggttcattgccagcccta 26298451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 41783325 - 41783411
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||||||||||||||  |||||| ||||||| || |||||||||||| ||||||| |||||||||| ||||||||| || |||||    
T  41783325 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcatttggttcatgaaccaagttcaacgaactaatt 41783411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 19282257 - 19282167
Alignment:
Q  5 agttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    |||||||||||| ||||| |  |||||| || |||||||||||||||||||  ||||||| |||||||||| ||||||||| | |||||||    
T  19282257 agttcaagttcagctcatctacttaacgaacctaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattg 19282167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 27906098 - 27906239
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| |  ||| ||  |||||||||| |||||||||  ||||   || || ||||||     
T  27906098 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatg 27906197  T
Q  105 tcgaactattttcgaactggtacggttcactgccagccctat 146  Q
    |||||||||  ||||  |||| ||||||| ||||||||||||    
T  27906198 tcgaactataatcgagttggttcggttcattgccagccctat 27906239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 34724891 - 34724754
Alignment:
Q  11 agttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatctcg 107  Q
    |||||||||||||| |||||||  ||||||||| | |||||||||| ||||||  |||||||||  ||||||||| ||| ||||    |||||||||||     
T  34724891 agttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcaaatcgaatctca 34724792  T
Q  108 aactattttcgaactggtacggttcactgccagcccta 145  Q
     ||||||||| |  |||| ||||||| |||| ||||||    
T  34724791 cactattttcaagttggttcggttcattgccggcccta 34724754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 2676009 - 2676083
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaac 75  Q
    ||||||||||||||||| | | ||  || ||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  2676009 atatagttcaagttcaatttaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaac 2676083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 14500846 - 14500760
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    ||||||||||||||||   |||||| ||||||| || |||||||||||| ||| ||| |||||||||| ||||||||| || |||||    
T  14500846 tcaagttcaactcattcagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaatt 14500760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 26218047 - 26218133
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    ||||||| |||||||||  |||||| ||||||| || |||||||||||| ||| ||| |||||||||| ||||||||| || |||||    
T  26218047 tcaagtttaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaatt 26218133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 34723797 - 34723707
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    ||||||||||||||||||||| |||||||  ||||||||| | ||||| |||| ||||||  |||||||||  ||||||||| ||| ||||    
T  34723797 tagttcaagttcaactcatttatttaacgagcttaattttaaactcaaattcgactcattaggttcatgaatcaagttcaacgaatcaatt 34723707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 145
Target Start/End: Original strand, 34857343 - 34857487
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcg 100  Q
    ||||| ||||| ||||||||| |||||||  ||||||||| | |||||||||| ||||||   ||||||||  ||||||||| ||| ||||   |||| |    
T  34857343 tagtttaagtttaactcatttatttaacgagcttaattttaaactcaagttcgactcattagattcatgaatcaagttcaacgaatcaattattgaattg 34857442  T
Q  101 aatctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    ||||||  |||||||||||  |||| ||||||| ||||| |||||    
T  34857443 aatctcacactattttcgagttggttcggttcattgccaacccta 34857487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 39409136 - 39409206
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaa 74  Q
    ||||||||||||||||||||| |||||||  ||||||||| | |||||||||| ||||||  |||||||||    
T  39409136 tagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaa 39409206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 32945151 - 32945021
Alignment:
Q  18 ctcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatctcgaactatt 114  Q
    ||||||| ||| |||  |||||||||   |||||||||| ||||||| |||||||||| ||||| ||| ||| ||||   ||||||| | ||||||||||    
T  32945151 ctcatttatttgacgagcttaatttttgactcaagttcgactcatttggttcatgaaccaagtttaacgaatcaattaccgaatcgagtttcgaactatt 32945052  T
Q  115 ttcgaactggtacggttcactgccagcccta 145  Q
    |||||  |||| ||||||| || ||||||||    
T  32945051 ttcgagttggttcggttcattgtcagcccta 32945021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 11136146 - 11136061
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||||||||||||||  |||||| ||||||| || |||||||||||| ||| ||| |||| ||||| ||||||||| || |||||    
T  11136146 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttc-tgaaccaagttcaacgaactaatt 11136061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 1225347 - 1225428
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaac 85  Q
    ||||||||||||   |||||| ||| |||  ||||||||||| |||||||||| ||||||| |||||| ||| |||||||||    
T  1225347 tagttcaagttcggttcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcataaactaagttcaac 1225428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 28246729 - 28246798
Alignment:
Q  5 agttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaa 74  Q
    |||||||||||||||||||| ||||| |   |||||||||| |||||||||| ||||||| |||| ||||    
T  28246729 agttcaagttcaactcatttatttaatgagtttaattttcaactcaagttcgactcatttggttcgtgaa 28246798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 30661054 - 30660961
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||||||| |||| |||||| |  |||||  |||||||||||| || || |||  |||||||||||||||||| |||||||| |||| ||||    
T  30661054 atatagttcatgttcgactcatataattaacaaacttaattttcaacttaaattcagctcatttagttcatgaactaagttcaataaatcaatt 30660961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 17168590 - 17168499
Alignment:
Q  3 atagttcaagttcaactcatttgtttaacggacttaattttc--agctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaa 92  Q
    |||||||||||||||||| ||| | ||||| | ||||||||   |||| ||||||| ||||||| |||  ||||| ||||||||||||||||    
T  17168590 atagttcaagttcaactcgtttatataacgaagttaattttttgagcttaagttcggctcatttggtttgtgaaccaagttcaacaaattaa 17168499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 20190698 - 20190650
Alignment:
Q  34 acttaattttcagctcaagttcgtctcatttagttcatgaacaaagttc 82  Q
    |||||||||| |||||||||||| ||||||| |||||||||| ||||||    
T  20190698 acttaattttgagctcaagttcggctcatttggttcatgaaccaagttc 20190650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 32157083 - 32157031
Alignment:
Q  2 tatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagtt 54  Q
    ||||||||||||||| |||||||  |||||| |||||||||||| ||||||||    
T  32157083 tatagttcaagttcagctcatttaattaacgaacttaattttcaactcaagtt 32157031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 1091119 - 1091205
Alignment:
Q  3 atagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatt 90  Q
    |||| ||||||||||||||||| ||||| | |||| ||||| | |||||||||| | |||||||||  ||||| ||||||||| ||||    
T  1091119 atagctcaagttcaactcatttatttaatgaactt-atttttaactcaagttcgacccatttagtttgtgaactaagttcaacgaatt 1091205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 24536002 - 24536093
Alignment:
Q  3 atagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||| || |||||||| ||| ||||||| |||||||||| ||||||| ||   |||||||  ||||||||| |  |||||||||||||||    
T  24536002 atagtttaaattcaactcgtttatttaacgaacttaattttgagctcaaatttagctcatttgattcatgaaccagattcaacaaattaatt 24536093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 15933154 - 15933303
Alignment:
Q  2 tatagttcaagttcaactcatttgtttaacggacttaatt---ttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg--- 95  Q
    ||||| ||||||||  ||||||| ||||||| |||||||    || |||||| ||||  ||||||  |||||||||| ||||||||| |||||| ||       
T  15933154 tatagctcaagttcggctcatttatttaacgaacttaatagtatttagctcatgttcaactcattaggttcatgaaccaagttcaacgaattaactgtcg 15933253  T
Q  96 aatcgaatctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    | |||||| |||||||||  ||||  |||| ||||||| |||||||||||    
T  15933254 agtcgaatttcgaactatactcgagttggttcggttcattgccagcccta 15933303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 18880192 - 18880269
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaac 85  Q
    ||||||||| |||||||  |||||| ||||||||||||||| |||| |  ||| ||  |||||||||| |||||||||    
T  18880192 tcaagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgttaggttcatgaaccaagttcaac 18880269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 24202729 - 24202774
Alignment:
Q  35 cttaattttcagctcaagttcgtctcatttagttcatgaacaaagt 80  Q
    ||||||||||| ||||||||||  ||||||||||||| ||||||||    
T  24202729 cttaattttcaactcaagttcgattcatttagttcatcaacaaagt 24202774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 6e-25; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 4 - 145
Target Start/End: Complemental strand, 3081862 - 3081718
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcg 100  Q
    ||||||||||||| |||||||  ||||||  ||||||||||| |||||||||| ||||||| |||| ||||| ||||||||| ||  ||||   ||||||    
T  3081862 tagttcaagttcagctcatttaattaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaaccaattatcgaatcg 3081763  T
Q  101 aatctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    | | ||||||||||||||| ||||| ||||||| |||||||||||    
T  3081762 agtatcgaactattttcgagctggttcggttcattgccagcccta 3081718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 5 - 145
Target Start/End: Original strand, 13312019 - 13312164
Alignment:
Q  5 agttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcga 101  Q
    |||||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||| |||||||||| |||| |||  ||  ||||   |||||||    
T  13312019 agttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcga 13312118  T
Q  102 --atctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
      || |||||||||||||||  |||| ||||||| |||||||||||    
T  13312119 gtatatcgaactattttcgagttggttcggttcattgccagcccta 13312164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 6999264 - 6999381
Alignment:
Q  5 agttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcga 101  Q
    ||||||||||||  |||||||||||||  ||||||||||||||||||||||  |||||||||||||| ||| ||||||||| ||||||||   |||||||    
T  6999264 agttcaagttcagttcatttgtttaacaaacttaattttcagctcaagttcagctcatttagttcattaaccaagttcaacgaattaattatcgaatcga 6999363  T
Q  102 atctcgaactattttcga 119  Q
     |||| ||||||| ||||    
T  6999364 gtctcaaactattgtcga 6999381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 145
Target Start/End: Complemental strand, 4441444 - 4441301
Alignment:
Q  5 agttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcga 101  Q
    |||||||||||| ||||||| ||||||| |||||||||||| |||||||||  |||||||||||| ||||| ||||||||| |  |||||   |||||||    
T  4441444 agttcaagttcagctcatttatttaacgaacttaattttcaactcaagttcagctcatttagttcgtgaaccaagttcaacgagctaattgtcgaatcga 4441345  T
Q  102 atctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
     | |||||||||| ||||  |||| ||||||| |||| ||||||    
T  4441344 gtttcgaactattgtcgagttggttcggttcattgccggcccta 4441301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 1501858 - 1501988
Alignment:
Q  18 ctcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg---aatcgaatctcgaactatt 114  Q
    ||||||| ||||||| |||||||||||||||||||||||  |||||| |||||||||| ||||||||| | |||||||   |||||| | |||||| |||    
T  1501858 ctcatttatttaacgaacttaattttcagctcaagttcggttcatttggttcatgaacgaagttcaacgagttaattgtcaaatcgagtttcgaacaatt 1501957  T
Q  115 ttcgaactggtacggttcactgccagcccta 145  Q
     ||||  |||| ||||||| || ||||||||    
T  1501958 gtcgagttggttcggttcattgtcagcccta 1501988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 10961943 - 10961849
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    |||||||||||||||| |||| ||  || ||| |||||||||||||||||| |||| ||||||| |||||||||| ||||||||| ||| |||||    
T  10961943 atatagttcaagttcagctcaattagttgacgaacttaattttcagctcaaattcgactcatttggttcatgaaccaagttcaacgaatcaattg 10961849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 5640399 - 5640252
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaa 97  Q
    |||||||||||||||| |||| ||  || ||| ||||||||||||| ||||||||| ||||||| |||||||||| |||||| || ||| ||||   |||    
T  5640399 atatagttcaagttcagctcaattagttgacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaa 5640300  T
Q  98 tcgaatctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    ||||||  |||||| |  ||||  |||| ||||||| |||||||||||    
T  5640299 tcgaattacgaactctaatcgagttggttcggttcattgccagcccta 5640252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 145
Target Start/End: Original strand, 7437300 - 7437444
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaa---ttaattgaatcg 100  Q
    ||||||||||||| ||||||| |||||||  ||||||||||| || ||||||| ||||||| |||| ||||| ||||||||| ||    | || ||||||    
T  7437300 tagttcaagttcagctcatttatttaacgagcttaattttcaactaaagttcgactcatttggttcgtgaaccaagttcaacgaacccattatcgaatcg 7437399  T
Q  101 aatctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    | | |||||||||||||||  | || ||||||| | |||||||||    
T  7437400 agtatcgaactattttcgagttagttcggttcattaccagcccta 7437444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 17441168 - 17441298
Alignment:
Q  18 ctcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatctcgaactatt 114  Q
    ||||||| ||| |||  ||||||||||| |||||||||  ||||||| |||||||||| ||||||||| ||||||||    |||||| | ||||||||||    
T  17441168 ctcatttatttgacgagcttaattttcaactcaagttcaactcatttggttcatgaactaagttcaacgaattaattaccaaatcgagtttcgaactatt 17441267  T
Q  115 ttcgaactggtacggttcactgccagcccta 145  Q
    ||||   |||| ||||||| ||||| |||||    
T  17441268 ttcgggttggttcggttcattgccaacccta 17441298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 9950907 - 9950826
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttc 82  Q
    |||||| ||||||||| |||| ||  || ||| |||||||||||| |||||||||| ||||||| |||||||||| ||||||    
T  9950907 atatagctcaagttcagctcaattagttgacgaacttaattttcaactcaagttcggctcatttggttcatgaaccaagttc 9950826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 10346721 - 10346861
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| |  ||| ||  |||||||||| |||||||||  ||||   || || ||||||     
T  10346721 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatagagtcgaatg 10346820  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||  ||||  ||||  |||||| |||||||||||    
T  10346821 tcgaactataatcgatttggtttggttcattgccagcccta 10346861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 27985034 - 27984943
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    ||||||||||||| |||| ||  || ||  ||||||||||||| ||||||||| ||||||| |||||| ||| |||||| || ||| |||||    
T  27985034 tagttcaagttcagctcaattagtttacaaacttaattttcagttcaagttcggctcatttggttcataaaccaagttcgacgaatcaattg 27984943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 22295916 - 22296002
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||| |||||| |||||  |||||| ||||||| || |||||||||||| ||| ||| |||||||||| ||||| || ||| |||||    
T  22295916 tcaaattcaacacatttacttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagtttaataaactaatt 22296002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 8200642 - 8200683
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctc 49  Q
    |||||||||||||||||  |||||| ||||||||||||||||    
T  8200642 tcaagttcaactcatttaattaacgaacttaattttcagctc 8200683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12428880 - 12428929
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctca 50  Q
    |||||| ||||||||  ||||||| ||||||| |||||||||||||||||    
T  12428880 atatagctcaagttcggctcatttatttaacgaacttaattttcagctca 12428929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 21093384 - 21093270
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||| |||||| ||||||||||   || ||||||| ||||||||||  ||||||  || | |||| ||||||||| |||||||    ||||||||||    
T  21093384 tcaagtttaactcagttgtttaacgagattgattttcaactcaagttcgagtcatttgatttacgaactaagttcaacgaattaatcaaagaatcgaatc 21093285  T
Q  105 tcgaactattttcga 119  Q
    || ||||| ||||||    
T  21093284 tcaaactactttcga 21093270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 21088 - 21228
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||||||||||||| ||||| |  ||||||||||| |||||||||| ||| ||| |||||||||| ||||||||| ||| ||||   ||||||| ||    
T  21088 tcaagttcaactcatttatttaatgagcttaattttcaactcaagttcgactc-tttggttcatgaaccaagttcaacgaatcaattatcgaatcgagtc 21186  T
Q  105 tcgaactattttcgaactggtacggttcactgccagccctat 146  Q
    |||||||||||||||  |||| ||||||| || |||||||||    
T  21187 tcgaactattttcgagttggttcggttcattgtcagccctat 21228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 3409328 - 3409188
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    |||| |||| ||||||| ||||||| ||||||||||||||||||||||   |||||| |||||||||| ||||||||| | ||||||   ||||||| |     
T  3409328 tcaaattcagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtt 3409229  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||| ||||  |||| ||||||| |||||||||||    
T  3409228 tcgaactattgtcgagttggttcggttcattgccagcccta 3409188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 44740623 - 44740486
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||||||  ||| ||| |||||||||| ||||||||| | ||||||   ||||||| ||    
T  44740623 tcaagttcagctcatttgtttaacgaacttaatttttagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtc 44740524  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcc 142  Q
     | ||||||| ||||  |||| ||||||| ||||||||    
T  44740523 ccaaactattgtcgagttggttcggttcattgccagcc 44740486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 145
Target Start/End: Original strand, 40458917 - 40459061
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaa---attaattgaatcg 100  Q
    ||||||||||||| ||||||| |||||||  ||||||||||| |||||||||| ||||||| |||| ||||| |||||||||||   | | |||||||||    
T  40458917 tagttcaagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattattgaatcg 40459016  T
Q  101 aatctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    | | || |||||||||| |  |||| ||||||| || ||||||||    
T  40459017 agtatcaaactattttcaagttggttcggttcattgtcagcccta 40459061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 27464713 - 27464571
Alignment:
Q  7 ttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaat 103  Q
    ||||||| |||||| ||| ||||  | ||||||||||||  ||||||||| ||||||| |||||||||| || |||||||||| ||||   ||||| | |    
T  27464713 ttcaagtccaactcctttatttagggaacttaattttcaattcaagttcgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcaagt 27464614  T
Q  104 ctcgaactattttcgaactggtacggttcactgccagccctat 146  Q
    ||||||||||||||||  |||| ||||||| || |||||||||    
T  27464613 ctcgaactattttcgagttggttcggttcattgtcagccctat 27464571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 11007113 - 11007026
Alignment:
Q  7 ttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||||||||||||||| |||||||  ||||||||||| |||||||||| ||||||| |||| ||||| ||||||||| ||| ||||    
T  11007113 ttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaatcaatt 11007026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 34116320 - 34116227
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||| ||||||||| |||| || |||| || |||||||||| |||||||||||| ||||||| |||||||||| |||||| |||||| ||||    
T  34116320 atatagctcaagttcagctcaattatttagcgaacttaattttaagctcaagttcggctcatttggttcatgaactaagttcgacaaatcaatt 34116227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 2578072 - 2578166
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    |||||| | ||||| ||||||||| ||||||| | ||||||||||||||||||||  |||||||  ||||||||  ||||||||||| |||||||    
T  2578072 atatagcttaagtttaactcatttatttaacgaatttaattttcagctcaagttcagctcatttgattcatgaatcaagttcaacaagttaattg 2578166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 2647114 - 2647028
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||||||||| ||||  |||||| |||||||||| |||||||||||| ||| ||| |||||||||| ||||||||| || |||||    
T  2647114 tcaagttcaacttatttagttaacgaacttaatttttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaatt 2647028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 12070659 - 12070537
Alignment:
Q  3 atagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatc 99  Q
    |||||| ||||| |||| |||||||||||| | |||||||||| ||||||||||  |||||||||| | |||  || |||||| ||||||||   ||||     
T  12070659 atagtttaagtttaacttatttgtttaacgaatttaattttcaactcaagttcgattcatttagttgacgaatcaaattcaacgaattaattaccgaatt 12070560  T
Q  100 gaatctcgaactattttcgaact 122  Q
    || |||| |||||||||||||||    
T  12070559 gagtctcaaactattttcgaact 12070537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 24844804 - 24844729
Alignment:
Q  10 aagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaac 85  Q
    ||||||| ||||||| |||| || | ||||||||||||||||||||  ||||||| |||||||||| |||||||||    
T  24844804 aagttcagctcatttatttatcgaatttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaac 24844729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 27634671 - 27634811
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| |  ||| ||  |||||||||| |||||||||  ||||   || || ||||||     
T  27634671 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaacggattaaatatcgagtcgaatg 27634770  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||  ||||  |||| ||||||| |||||||||||    
T  27634771 tcgaactataatcgagttggttcggttcattgccagcccta 27634811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 2328438 - 2328345
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    ||||| |||||||||||||||||| ||| | ||  |||||||||| |||||||| | ||||||||  ||||||| |||||| ||| ||||||||    
T  2328438 atataattcaagttcaactcatttatttgaagggtttaattttcaactcaagtttgactcatttaaatcatgaataaagtttaacgaattaatt 2328345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 30713149 - 30713230
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttc 82  Q
    |||||| |||||||||||||| ||  || ||| |||||| |||||||||| ||||| ||||||| |||||||||| ||||||    
T  30713149 atatagctcaagttcaactcaattagttgacgaacttaaatttcagctcatgttcggctcatttggttcatgaaccaagttc 30713230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 1094457 - 1094533
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaa 84  Q
    |||||||| |||||||| || ||||  ||||||||||| |||||||||| ||||||| |||||||||| || |||||    
T  1094457 tcaagttcgactcatttattcaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaattcaa 1094533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 27902585 - 27902492
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    |||||| |||||||||||||| ||  || ||| | |||||||||||||||||||||  |||||| |||||||||| |||||| || ||| |||||    
T  27902585 atatagctcaagttcaactcaattagttgacg-atttaattttcagctcaagttcggttcattttgttcatgaaccaagttcgacgaatcaattg 27902492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 29806950 - 29807046
Alignment:
Q  52 gttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatctcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    ||||| ||||||| |||| | ||| ||||||||| ||| ||||   ||||||| ||| |||||||||||||| |||| ||||||| |||||||||||    
T  29806950 gttcggctcatttggttcgtaaaccaagttcaacgaatcaattatcgaatcgagtcttgaactattttcgaattggttcggttcattgccagcccta 29807046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 33831495 - 33831635
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| |  ||| ||  |||||||||| || ||||||  ||||   || || ||||||     
T  33831495 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaaattcaacggattagatatcgagtcgaatg 33831594  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||  ||||  |||| ||||||| |||||||||||    
T  33831595 tcgaactataatcgagttggttcggttcattgccagcccta 33831635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 34064705 - 34064813
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| |  ||| ||  |||||||||| |||||||||  ||||   ||||| ||||||     
T  34064705 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaacggattagatattgagtcgaatg 34064804  T
Q  105 tcgaactat 113  Q
    |||||||||    
T  34064805 tcgaactat 34064813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 38409718 - 38409644
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaac 75  Q
    |||||||| ||||||| |||| ||  || ||  ||||||||||||||||||||||| ||||||| ||||||||||    
T  38409718 atatagttaaagttcagctcaattagttcacaaacttaattttcagctcaagttcggctcatttggttcatgaac 38409644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 26436354 - 26436431
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaac 85  Q
    ||||||||| |||||||  |||||| ||||||||||||||||| ||||  ||| ||  |||||||||| |||||||||    
T  26436354 tcaagttcagctcatttaattaacgaacttaattttcagctcacgttcagctcgttaggttcatgaaccaagttcaac 26436431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 41332243 - 41332345
Alignment:
Q  20 catttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatctcgaactatttt 116  Q
    ||||| ||||||  |||||||||||||||||| |||  |||| || ||| |||||| ||||||||||| ||||||   ||||||| | ||||||||| ||    
T  41332243 catttatttaacaaacttaattttcagctcaaattcaactcaattggtttatgaaccaagttcaacaagttaattgtcgaatcgagtttcgaactatatt 41332342  T
Q  117 cga 119  Q
    |||    
T  41332343 cga 41332345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 9753100 - 9753212
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaa 97  Q
    |||||| |||||||||||||||||  ||  ||||||||||||| || ||| |||| |||||||| |||||||||| ||  | ||| ||| ||||   |||    
T  9753100 atatagctcaagttcaactcatttagttgccggacttaatttt-agttcacgttcttctcatttggttcatgaaccaaacttaacgaatcaattgtcgaa 9753198  T
Q  98 tcgaatctcgaact 111  Q
    ||||||||||||||    
T  9753199 tcgaatctcgaact 9753212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 13829877 - 13829964
Alignment:
Q  7 ttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    ||||||||||||||||||  ||||||   |||||||| | |||||||||  ||||||| ||| |||||| ||||||||| ||| ||||    
T  13829877 ttcaagttcaactcatttaattaacgagtttaatttttaactcaagttcaactcatttggtttatgaaccaagttcaacgaatcaatt 13829964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 20203825 - 20203767
Alignment:
Q  37 taattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    |||||||||||||| ||| | ||||||| |||||||||| ||||||||| ||| |||||    
T  20203825 taattttcagctcaggtttgactcatttggttcatgaaccaagttcaacgaatcaattg 20203767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 14103260 - 14103353
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||||| ||||||  |||||||  |||||| ||||||||||||| | ||||||| || |||| | |||||||| ||||| ||| | ||||||    
T  14103260 atatagtttaagttctgctcatttaattaacgaacttaattttcagtttaagttcgacttatttggctcatgaaccaagttaaacgagttaatt 14103353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 36538656 - 36538733
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaac 85  Q
    ||||||| | |||||||  |||||| |||||||||||||||||||| |  ||| ||  |||||||||| |||||||||    
T  36538656 tcaagtttagctcatttaattaacgaacttaattttcagctcaagtccaactcgttaggttcatgaaccaagttcaac 36538733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39690163 - 39690216
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagtt 54  Q
    |||||| |||||||||||||| ||  || ||| |||||||||||||||||||||    
T  39690163 atatagctcaagttcaactcaattagttgacgaacttaattttcagctcaagtt 39690216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 33164110 - 33163992
Alignment:
Q  18 ctcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatctcgaactatt 114  Q
    |||||||  |||||| |||||||||||||||||||| |  ||| ||  |||||||||| |||||||||  ||||   || || |||||| |||||||||     
T  33164110 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactata 33164011  T
Q  115 ttcgaactggtacggttca 133  Q
     ||||| |||| |||||||    
T  33164010 atcgaattggttcggttca 33163992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 3307934 - 3308074
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||||  ||||||| ||||||| ||||||||||| ||||||||||| ||||||| |||||||||| |||||| || | ||||||   ||||||| |     
T  3307934 tcaagttcggctcatttatttaacgaacttaattttctgctcaagttcggctcatttggttcatgaactaagttctacgagttaattgtcgaatcgagtt 3308033  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
     ||||||||| ||||  |||| ||||||| |||||||||||    
T  3308034 ccgaactattgtcgagttggttcggttcattgccagcccta 3308074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 1091727 - 1091838
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||||||||||||||||| ||| |||||||||| | |||| ||||| ||| ||| |||||||||  ||||||||| ||||||||   ||||||| ||    
T  1091727 tcaagttcaactcatttgtttgacgaacttaattttaaactcaggttcgactcgtttggttcatgaatcaagttcaacgaattaattatcgaatcgagtc 1091826  T
Q  105 tcgaactatttt 116  Q
    || |||||||||    
T  1091827 tcaaactatttt 1091838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 27189222 - 27189148
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttc 82  Q
    |||||||||||||| ||  || ||| ||||||||||||||||||||||| ||||||| |||||||||| ||||||    
T  27189222 tcaagttcaactcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttc 27189148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 43384831 - 43384922
Alignment:
Q  45 agctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatctcgaactattttcgaactggtacggttca 133  Q
    |||||||||||  ||||||| |||||||||| || |||||| ||||||||   |||||||||||||||||||||||||  |||| |||||||    
T  43384831 agctcaagttcaactcatttggttcatgaaccaacttcaacgaattaattatcgaatcgaatctcgaactattttcgagttggttcggttca 43384922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 453483 - 453623
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    |||||||||||||||||  |||||| |||||||||||| ||||||| |  ||| ||  |||||||||| |||||||||  ||||   || || ||||||     
T  453483 tcaagttcaactcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatg 453582  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||  ||||  |||| ||||||| |||||||||||    
T  453583 tcgaactataatcgagttggttcggttcattgccagcccta 453623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 34655035 - 34655121
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    ||||||| |||||||||  |||||  ||||||| || |||||||||||| ||| ||| |||||||||| |||||||||||| |||||    
T  34655035 tcaagtttaactcatttagttaacaaacttaatctttagctcaagttcgactcgtttggttcatgaactaagttcaacaaactaatt 34655121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 43967510 - 43967596
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    |||||||||||||||||  |||||| ||||||| || |||||||||||| ||| ||| |||||||||| || |||||| || |||||    
T  43967510 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaaattcaacgaactaatt 43967596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 23181151 - 23181222
Alignment:
Q  4 tagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaac 75  Q
    ||||||||||||| |||| ||  || ||| ||||||||||||| ||||||||| ||||||| ||||||||||    
T  23181151 tagttcaagttcagctcaattagtttacgaacttaattttcagttcaagttcggctcatttggttcatgaac 23181222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 34516131 - 34516214
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaa 84  Q
    |||||||||||||||| |||| ||  |  ||| ||||||||||||||||||||||| ||||||| ||| |||||  ||||||||    
T  34516131 atatagttcaagttcagctcaattaatcgacgaacttaattttcagctcaagttcggctcatttggttgatgaatcaagttcaa 34516214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 11161572 - 11161649
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaac 85  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| |  ||| ||  |||||||||| |||||||||    
T  11161572 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 11161649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 33280124 - 33280043
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttc 82  Q
    |||||||||||||||| |||| ||  || ||| |||||||||| ||||||  |||| ||||||| |||||||||| ||||||    
T  33280124 atatagttcaagttcagctcaattagttgacgaacttaattttaagctcatattcggctcatttggttcatgaaccaagttc 33280043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 133
Target Start/End: Complemental strand, 51443 - 51314
Alignment:
Q  7 ttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaat 103  Q
    |||||||||||||||||| ||||||   ||||||||| |  ||| ||||| ||||||| ||||| |||| ||||||||| ||||| ||   ||| |||||    
T  51443 ttcaagttcaactcatttatttaacaagcttaattttaaaatcacgttcgactcatttggttcacgaactaagttcaacgaattatttaccgaaccgaat 51344  T
Q  104 ctcgaactattttcgaactggtacggttca 133  Q
    |||||||||||||||| || || |||||||    
T  51343 ctcgaactattttcgagctagttcggttca 51314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 907 - 778
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattgaatcgaatctcg 107  Q
    ||||||||||||||||| |||||||  ||||||||||| | ||| |||  ||||||| |||||||||| |||||||||         ||||||| ||||     
T  907 tcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatgaaccaagttcaac---------gaatcgagtctca 817  T
Q  108 aactattttcgaactggtacggttcactgccagccctat 146  Q
    ||||||||||||| |||| ||||||| || |||||||||    
T  816 aactattttcgaattggttcggttcattggcagccctat 778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7455 - 7374
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttc 82  Q
    |||| ||||||||||| |||| ||  ||| || ||||||||||||||||||||||| ||||||| |||||||||| ||||||    
T  7455 atatggttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttc 7374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 26768 - 26680
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaat 89  Q
    |||||| | ||||||| |||| ||  || ||| ||||||||||||||||||||||| |||||||  ||||||||| |||||||||||||    
T  26768 atatagcttaagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatgaaccaagttcaacaaat 26680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 124627 - 124545
Alignment:
Q  2 tatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaa 84  Q
    |||||||||| |||| |||||||  |||||  |||||||  |||||||||||||| ||||||| |||||||||| ||||||||    
T  124627 tatagttcaaattcagctcatttaattaacaaacttaataatcagctcaagttcgactcatttggttcatgaaccaagttcaa 124545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 133
Target Start/End: Original strand, 96280 - 96408
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatc 104  Q
    ||||||||||||||||| |||||||  ||||||||| | || ||||| | ||||||| ||||| |||  ||||||||  ||||| ||   ||| ||||||    
T  96280 tcaagttcaactcatttatttaacgagcttaattttgaacttaagttggactcatttggttcacgaattaagttcaatgaattatttaacgaaccgaatc 96379  T
Q  105 tcgaactattttcgaactggtacggttca 133  Q
    ||||||||||||||| || || |||||||    
T  96380 tcgaactattttcgagctagttcggttca 96408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 11462 - 11555
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt 94  Q
    ||||||||||| |||| |||||||  |||||| |||||||||||| || ||||||| ||||||| ||  |||||  ||||||||| ||||||||    
T  11462 atatagttcaaattcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatcaagttcaacgaattaatt 11555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 9982 - 10076
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaattg 95  Q
    ||||||| ||| |||| |||||||  |||||| |||||||||||| || ||||||| ||||||| || ||||||  || |||||| |||||||||    
T  9982 atatagtacaaattcagctcatttaattaacgaacttaattttcatcttaagttcggctcatttggtacatgaatcaaattcaacgaattaattg 10076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 32926 - 32791
Alignment:
Q  5 agttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcga 101  Q
    ||||||||||||| |||||| |||||||  |||||||| || |||||||||| ||||||| ||   ||||| ||||||||| ||  ||||   |||||||    
T  32926 agttcaagttcaattcatttatttaacgagcttaatttacaactcaagttcgactcatttggt--gtgaaccaagttcaacgaaccaattgtcgaatcga 32829  T
Q  102 atctcgaactattttcgaactggtacggttcactgcca 139  Q
     | |||||||||||||||  |||| ||||||| |||||    
T  32828 gtatcgaactattttcgagttggttcggttcattgcca 32791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 19296 - 19436
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta---attgaatcgaatc 104  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||| |  ||| ||  |||||||||| ||||||||   ||||   || || ||||||     
T  19296 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaaaggattagatatcgagtcgaatg 19395  T
Q  105 tcgaactattttcgaactggtacggttcactgccagcccta 145  Q
    |||||||||  ||||  |||| ||||||| |||||||||||    
T  19396 tcgaactataatcgagttggttcggttcattgccagcccta 19436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 25712 - 25623
Alignment:
Q  1 atatagttcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta 91  Q
    ||||| |||||||||| |||||||  |||||||||||||||||||| | ||||||| |||||||   |||| ||| ||||||||| |||||    
T  25712 atataattcaagttcatctcatttaattaacggacttaattttcagtttaagttcg-ctcatttgactcataaaccaagttcaacgaatta 25623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 324 - 241
Alignment:
Q  8 tcaagttcaactcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaatta 91  Q
    |||||||||||||||||  |||||| |||||||| | | |||||||||| || |||  |||||||||| |||| |||| |||||    
T  324 tcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagtccaacgaatta 241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 14436 - 14566
Alignment:
Q  18 ctcatttgtttaacggacttaattttcagctcaagttcgtctcatttagttcatgaacaaagttcaacaaattaatt---gaatcgaatctcgaactatt 114  Q
    ||||||| ||| |||  ||||||||||  |||||||||   |||||| |||||||||| ||||||||  ||| ||||   ||||||| | ||||||||||    
T  14436 ctcatttatttgacgagcttaattttcgactcaagttcaaatcatttggttcatgaaccaagttcaatgaatcaattaccgaatcgagtttcgaactatt 14535  T
Q  115 ttcgaactggtacggttcactgccagcccta 145  Q
    ||||   |||| ||||||| || ||||||||    
T  14536 ttcgggttggttcggttcattgtcagcccta 14566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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