View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20226_high_29 (Length: 302)
Name: NF20226_high_29
Description: NF20226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20226_high_29 |
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Alignment Details
Target: chr8 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 30 - 299
Target Start/End: Complemental strand, 41853105 - 41852836
Alignment:
| Q |
30 |
ctataacaggatacttcagaaagcaacggaattttagaataatgaatcagcaatggtagctaggaatttacaagtgtccttgaagttaatattggaacta |
129 |
Q |
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| T |
41853105 |
ctataacaggatacttcagaaagcaacggaattttagaataatgaatcagcaatggtagctaggaatttacaagtgtccttgaagttaatattggaacta |
41853006 |
T |
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| Q |
130 |
caatttcagcactttttagcagcatttattttcaaataagtagttgctccaaatttgcattggtacaatttgtgtctcacatgtttagtacaagatcgtc |
229 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
41853005 |
caatttcagcactttttagcagcatttattttcaaataagtagttgctccaaatttgcattggtacaatttgtgtctcacatgtttagtacaagagcgtc |
41852906 |
T |
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| Q |
230 |
gaaaattcgcaatgataataatgagagctattaactaaagcgagctaagtgacataacagcatcattcat |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41852905 |
gaaaattcgcaatgataataatgagagctattaactaaagcgagctaagtgacataacagcatcattcat |
41852836 |
T |
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