View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20226_high_35 (Length: 276)

Name: NF20226_high_35
Description: NF20226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20226_high_35
NF20226_high_35
[»] chr3 (32 HSPs)
chr3 (14-142)||(2567509-2567637)
chr3 (135-258)||(2566568-2566691)
chr3 (158-251)||(10307859-10307952)
chr3 (165-251)||(2571361-2571447)
chr3 (165-251)||(12515473-12515559)
chr3 (165-251)||(51618140-51618226)
chr3 (166-251)||(46492343-46492428)
chr3 (165-251)||(36426408-36426494)
chr3 (166-251)||(33474473-33474558)
chr3 (167-251)||(42180145-42180229)
chr3 (160-251)||(23523039-23523130)
chr3 (160-251)||(50204496-50204587)
chr3 (165-251)||(38389540-38389626)
chr3 (167-252)||(8497421-8497506)
chr3 (166-251)||(13495387-13495472)
chr3 (167-251)||(31318734-31318818)
chr3 (165-209)||(32553501-32553545)
chr3 (167-251)||(54527707-54527791)
chr3 (165-251)||(45983599-45983685)
chr3 (165-251)||(51401533-51401619)
chr3 (167-251)||(51567821-51567902)
chr3 (167-240)||(8165750-8165823)
chr3 (166-251)||(35414809-35414894)
chr3 (166-242)||(15269160-15269236)
chr3 (178-232)||(55415128-55415182)
chr3 (190-251)||(26291261-26291322)
chr3 (161-210)||(40930185-40930234)
chr3 (165-209)||(3863464-3863508)
chr3 (165-209)||(11671514-11671558)
chr3 (159-251)||(16875018-16875110)
chr3 (167-251)||(23638050-23638134)
chr3 (167-251)||(37332206-37332290)
[»] chr2 (31 HSPs)
chr2 (165-251)||(7757785-7757871)
chr2 (165-251)||(38248419-38248505)
chr2 (159-251)||(29157822-29157914)
chr2 (165-251)||(5583557-5583643)
chr2 (165-251)||(43806453-43806539)
chr2 (165-248)||(24729576-24729659)
chr2 (165-251)||(4576325-4576411)
chr2 (165-251)||(9747410-9747496)
chr2 (156-210)||(36731314-36731368)
chr2 (166-251)||(5853463-5853548)
chr2 (166-251)||(16493532-16493617)
chr2 (167-251)||(12919351-12919435)
chr2 (163-251)||(26003343-26003431)
chr2 (166-251)||(22704630-22704715)
chr2 (168-251)||(15411624-15411707)
chr2 (177-251)||(25948132-25948206)
chr2 (165-251)||(29142167-29142253)
chr2 (159-251)||(37471734-37471825)
chr2 (165-240)||(8065227-8065302)
chr2 (168-251)||(19228518-19228601)
chr2 (166-209)||(20566017-20566060)
chr2 (165-240)||(43388480-43388555)
chr2 (167-241)||(6765103-6765177)
chr2 (159-209)||(9450392-9450442)
chr2 (165-251)||(16126558-16126644)
chr2 (168-209)||(2060044-2060085)
chr2 (166-251)||(7720208-7720293)
chr2 (165-198)||(14707011-14707044)
chr2 (166-210)||(5979692-5979736)
chr2 (165-209)||(6109524-6109568)
chr2 (168-208)||(36909419-36909459)
[»] chr1 (40 HSPs)
chr1 (165-251)||(23576413-23576499)
chr1 (165-251)||(1502719-1502805)
chr1 (166-251)||(1366140-1366225)
chr1 (155-240)||(4607579-4607664)
chr1 (165-251)||(30362994-30363080)
chr1 (165-251)||(36490872-36490958)
chr1 (166-251)||(23591791-23591876)
chr1 (159-248)||(47355371-47355460)
chr1 (165-251)||(6180279-6180365)
chr1 (165-251)||(38812833-38812919)
chr1 (166-251)||(51920431-51920516)
chr1 (163-251)||(13321969-13322057)
chr1 (166-246)||(29635748-29635828)
chr1 (163-251)||(30288861-30288949)
chr1 (161-241)||(41676555-41676635)
chr1 (165-209)||(44918159-44918203)
chr1 (167-210)||(9516715-9516758)
chr1 (166-208)||(2222236-2222278)
chr1 (165-251)||(30171972-30172058)
chr1 (165-251)||(30187513-30187599)
chr1 (165-251)||(35512818-35512904)
chr1 (161-209)||(10896488-10896536)
chr1 (165-221)||(34802090-34802146)
chr1 (165-248)||(6754567-6754650)
chr1 (167-210)||(13241891-13241934)
chr1 (165-240)||(25465262-25465337)
chr1 (167-210)||(35438849-35438892)
chr1 (165-251)||(3168067-3168153)
chr1 (165-199)||(5879102-5879136)
chr1 (166-251)||(7519996-7520082)
chr1 (165-251)||(22167428-22167514)
chr1 (166-251)||(5057095-5057180)
chr1 (166-251)||(25532302-25532387)
chr1 (165-210)||(39310785-39310830)
chr1 (165-209)||(313884-313928)
chr1 (165-209)||(6569984-6570028)
chr1 (166-246)||(16966463-16966543)
chr1 (165-209)||(19066633-19066677)
chr1 (165-209)||(19114523-19114567)
chr1 (183-251)||(41617799-41617867)
[»] chr5 (28 HSPs)
chr5 (158-251)||(30839874-30839967)
chr5 (152-251)||(36597672-36597771)
chr5 (165-251)||(6863649-6863735)
chr5 (166-251)||(23995416-23995501)
chr5 (165-251)||(3398313-3398399)
chr5 (167-251)||(15820319-15820403)
chr5 (168-251)||(31567493-31567576)
chr5 (165-251)||(26376515-26376600)
chr5 (165-209)||(13515925-13515969)
chr5 (166-210)||(35469688-35469732)
chr5 (168-251)||(28378828-28378910)
chr5 (165-251)||(2795616-2795702)
chr5 (166-251)||(15837368-15837453)
chr5 (166-251)||(32019984-32020069)
chr5 (166-251)||(40166375-40166459)
chr5 (165-248)||(8103579-8103662)
chr5 (165-240)||(11636835-11636910)
chr5 (167-234)||(15190983-15191050)
chr5 (167-210)||(29628492-29628535)
chr5 (159-209)||(4047547-4047597)
chr5 (169-251)||(40513044-40513126)
chr5 (151-229)||(40980488-40980566)
chr5 (167-240)||(16174623-16174696)
chr5 (167-251)||(14466495-14466579)
chr5 (159-251)||(15240943-15241035)
chr5 (175-251)||(24014697-24014773)
chr5 (167-199)||(29855898-29855930)
chr5 (168-232)||(30893741-30893805)
[»] chr8 (44 HSPs)
chr8 (165-251)||(3306054-3306140)
chr8 (160-251)||(9580103-9580194)
chr8 (165-251)||(2161480-2161566)
chr8 (165-251)||(43717551-43717637)
chr8 (165-251)||(15198899-15198985)
chr8 (165-251)||(28014857-28014943)
chr8 (165-250)||(26682162-26682247)
chr8 (166-251)||(40225987-40226072)
chr8 (155-251)||(14961652-14961748)
chr8 (165-248)||(26363989-26364072)
chr8 (152-251)||(38843797-38843896)
chr8 (165-251)||(26834654-26834740)
chr8 (165-251)||(27874680-27874766)
chr8 (165-251)||(31812206-31812292)
chr8 (166-251)||(38212944-38213029)
chr8 (159-251)||(12132076-12132168)
chr8 (166-251)||(26195259-26195346)
chr8 (168-251)||(20514726-20514809)
chr8 (159-240)||(4080386-4080468)
chr8 (151-209)||(18567401-18567459)
chr8 (168-250)||(44091412-44091494)
chr8 (162-251)||(39701799-39701888)
chr8 (183-251)||(297188-297256)
chr8 (163-251)||(12189585-12189673)
chr8 (163-251)||(12434013-12434101)
chr8 (167-251)||(13327942-13328026)
chr8 (167-251)||(37389455-37389539)
chr8 (165-232)||(7977990-7978057)
chr8 (160-251)||(10129196-10129287)
chr8 (165-252)||(12958592-12958679)
chr8 (159-232)||(4084535-4084609)
chr8 (159-232)||(4102842-4102916)
chr8 (165-247)||(5573383-5573465)
chr8 (165-235)||(19343835-19343905)
chr8 (173-251)||(36967077-36967155)
chr8 (158-251)||(7140451-7140544)
chr8 (165-234)||(14816125-14816194)
chr8 (165-234)||(14829546-14829615)
chr8 (161-210)||(22838359-22838408)
chr8 (167-240)||(41979875-41979948)
chr8 (160-248)||(6818113-6818201)
chr8 (166-234)||(9825063-9825131)
chr8 (167-199)||(11946921-11946953)
chr8 (166-210)||(13496709-13496753)
[»] chr7 (32 HSPs)
chr7 (165-251)||(33343081-33343167)
chr7 (165-251)||(34270354-34270440)
chr7 (165-251)||(46290103-46290189)
chr7 (162-251)||(8091308-8091397)
chr7 (166-250)||(26300665-26300749)
chr7 (165-251)||(4969866-4969952)
chr7 (165-251)||(33072074-33072160)
chr7 (159-251)||(25709392-25709484)
chr7 (183-251)||(47707901-47707969)
chr7 (168-251)||(28323228-28323311)
chr7 (158-251)||(12085923-12086016)
chr7 (166-251)||(29398134-29398219)
chr7 (166-251)||(45501552-45501637)
chr7 (167-251)||(7899487-7899571)
chr7 (168-251)||(41331458-41331541)
chr7 (165-251)||(5909281-5909367)
chr7 (165-251)||(9332054-9332140)
chr7 (165-251)||(23982754-23982840)
chr7 (161-210)||(2341883-2341932)
chr7 (168-240)||(26037197-26037269)
chr7 (165-209)||(32117949-32117993)
chr7 (165-209)||(47457460-47457504)
chr7 (165-248)||(7170098-7170181)
chr7 (166-209)||(8595032-8595075)
chr7 (167-210)||(26050462-26050505)
chr7 (167-210)||(26059821-26059864)
chr7 (165-208)||(44807035-44807078)
chr7 (169-251)||(24462958-24463040)
chr7 (165-251)||(36032542-36032628)
chr7 (165-251)||(39757109-39757195)
chr7 (165-210)||(820540-820585)
chr7 (165-209)||(3561877-3561921)
[»] chr6 (24 HSPs)
chr6 (165-251)||(14228125-14228211)
chr6 (165-251)||(17552586-17552672)
chr6 (165-251)||(28943768-28943854)
chr6 (166-250)||(30591163-30591247)
chr6 (165-251)||(31169762-31169848)
chr6 (165-251)||(33017817-33017903)
chr6 (165-251)||(34692447-34692533)
chr6 (166-251)||(10887122-10887207)
chr6 (164-251)||(1017775-1017863)
chr6 (167-251)||(8977467-8977551)
chr6 (164-234)||(31568219-31568289)
chr6 (165-210)||(3261212-3261257)
chr6 (165-209)||(3853078-3853122)
chr6 (167-251)||(6016949-6017033)
chr6 (167-251)||(31069583-31069667)
chr6 (166-249)||(4371935-4372017)
chr6 (165-251)||(18332687-18332773)
chr6 (164-210)||(29863300-29863346)
chr6 (165-210)||(12454199-12454244)
chr6 (166-251)||(27819627-27819712)
chr6 (174-210)||(17154757-17154793)
chr6 (162-210)||(29065421-29065469)
chr6 (162-210)||(29120274-29120322)
chr6 (159-199)||(31040507-31040547)
[»] chr4 (40 HSPs)
chr4 (165-251)||(39876923-39877009)
chr4 (165-251)||(50352395-50352481)
chr4 (165-251)||(51691434-51691520)
chr4 (159-251)||(40049651-40049743)
chr4 (167-251)||(52391391-52391475)
chr4 (156-251)||(19468287-19468382)
chr4 (160-251)||(27019353-27019444)
chr4 (165-251)||(9759141-9759227)
chr4 (165-251)||(18882266-18882352)
chr4 (165-251)||(34941371-34941457)
chr4 (166-251)||(4779436-4779521)
chr4 (166-251)||(10658417-10658502)
chr4 (166-251)||(10872562-10872647)
chr4 (155-251)||(19450889-19450985)
chr4 (169-251)||(24684930-24685012)
chr4 (166-251)||(23545569-23545654)
chr4 (166-251)||(36971367-36971452)
chr4 (167-251)||(16667385-16667469)
chr4 (167-251)||(55813957-55814041)
chr4 (165-251)||(17409917-17410003)
chr4 (165-251)||(27362484-27362570)
chr4 (165-251)||(44916642-44916728)
chr4 (165-251)||(49181165-49181251)
chr4 (160-209)||(8736805-8736854)
chr4 (165-234)||(23051381-23051450)
chr4 (166-251)||(46803892-46803977)
chr4 (159-251)||(27756654-27756746)
chr4 (162-234)||(29190812-29190884)
chr4 (165-251)||(33632202-33632287)
chr4 (170-251)||(38222379-38222461)
chr4 (165-251)||(54495636-54495722)
chr4 (166-251)||(1378111-1378195)
chr4 (166-251)||(19838691-19838776)
chr4 (166-251)||(47326892-47326977)
chr4 (166-251)||(47341688-47341773)
chr4 (166-251)||(53961415-53961500)
chr4 (165-241)||(23438258-23438334)
chr4 (166-210)||(32279205-32279249)
chr4 (165-209)||(35999946-35999990)
chr4 (168-208)||(42479894-42479934)
[»] scaffold0229 (1 HSPs)
scaffold0229 (166-251)||(24527-24612)
[»] scaffold0618 (1 HSPs)
scaffold0618 (168-250)||(8416-8498)
[»] scaffold0061 (1 HSPs)
scaffold0061 (165-251)||(52778-52864)
[»] scaffold0017 (1 HSPs)
scaffold0017 (165-251)||(145770-145856)
[»] scaffold0011 (1 HSPs)
scaffold0011 (162-210)||(13219-13267)
[»] scaffold0305 (1 HSPs)
scaffold0305 (166-249)||(17788-17871)
[»] scaffold0128 (1 HSPs)
scaffold0128 (165-252)||(44293-44380)
[»] scaffold0111 (2 HSPs)
scaffold0111 (166-241)||(41085-41160)
scaffold0111 (165-251)||(37113-37199)
[»] scaffold0074 (1 HSPs)
scaffold0074 (166-251)||(45497-45582)
[»] scaffold0036 (1 HSPs)
scaffold0036 (166-251)||(94018-94103)
[»] scaffold0155 (1 HSPs)
scaffold0155 (165-209)||(3412-3456)
[»] scaffold0018 (1 HSPs)
scaffold0018 (165-209)||(182177-182221)


Alignment Details
Target: chr3 (Bit Score: 101; Significance: 4e-50; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 2567637 - 2567509
Alignment:
Q  14 aaaatgtggtattcggtatgaaattttctcaacataggggaatttgagagtttcttgtgagacaaatagtcactaaggatcacactctaggagtattata 113  Q
    |||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||    
T  2567637 aaaacgtggtatacggtatgaaattttctcaacatagtggaatttgagagtttcttgtgagacaaataatcactatggatcacactctaagagtattata 2567538  T
Q  114 atcacgtaagtactcacttcattccataa 142  Q
    |||||||||||||||||||||||| ||||    
T  2567537 atcacgtaagtactcacttcattctataa 2567509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 135 - 258
Target Start/End: Complemental strand, 2566691 - 2566568
Alignment:
Q  135 ttccataataattgacctatttataaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgt 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||  ||||||||| ||||||||||||    
T  2566691 ttccataataattgacctatttataaaaaaggtttttctatcatgtgcaaatttacacatgttagaaaatttaaaatagtaattttgtattgaaacttgt 2566592  T
Q  235 acattttgtattaaataacgtttt 258  Q
    |||||||||||| |||||| ||||    
T  2566591 acattttgtattgaataacatttt 2566568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 10307952 - 10307859
Alignment:
Q  158 taaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||| ||||||||||||||||| |||||| |||||||||| ||||||||||  |||| |||| |||| |||||| |||||||||||||||||    
T  10307952 taaaaagggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaaatttgcattggaacttgaacattttgtattaaata 10307859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 2571447 - 2571361
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||  |||| |||| |||| |||||| |||||||||||||||||    
T  2571447 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaata 2571361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 12515473 - 12515559
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||  |||| |||| || | |||||| |||||||||||||||||    
T  12515473 ggtttttctatcatgtgtaaatttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaata 12515559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 51618226 - 51618140
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || ||| ||| ||||| |||| |||| ||||||||||||||||||||||||    
T  51618226 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttcaaattgtaactttgcattggaacttgtacattttgtattaaata 51618140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 46492343 - 46492428
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||| |||| ||||| |||||||||   |||| |||| |||||||||||||||||||||||||||||    
T  46492343 gtttttctatcatgtgcaaattttcacacgttaagaaatttaaagtagtaactttgcattgaaacttgtacattttgtattaaata 46492428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 36426408 - 36426494
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||||||||||||||||||||| || ||||||   |||||||||| ||| ||||||| |||||  |||||||||    
T  36426408 ggtttttctatcatgtgtaaatttacacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaata 36426494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 33474473 - 33474558
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||| |||||||||| || |||| || || ||||||| ||||||| || ||||||||||| ||||||    
T  33474473 gtttttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaata 33474558  T

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Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 42180229 - 42180145
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||||||||| |||||||||| || |||||||    ||||||| |||| |||||||||||||  |||||||||    
T  42180229 tttttctatcatgtgtaaatttgcacatgttaagaagtttaaaataaaaattttgtattggaacttgtacatttaatattaaata 42180145  T

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Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 251
Target Start/End: Complemental strand, 23523130 - 23523039
Alignment:
Q  160 aaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||| ||||||||||||||||| |||||| |||||||||| || ||||||   |||||||||| ||| ||||||| |||||  |||||||||    
T  23523130 aaaagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaata 23523039  T

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Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 251
Target Start/End: Complemental strand, 50204587 - 50204496
Alignment:
Q  160 aaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||| ||||||||||||||||| |||||| |||||||||| || |||||||  | ||||||| |||| ||| |||||||||  |||||||||    
T  50204587 aaaagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacctgtacatttaatattaaata 50204496  T

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Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 38389626 - 38389540
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || ||||||   |||||||||| ||| ||||||| |||||  |||||||||    
T  38389626 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaata 38389540  T

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Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 8497421 - 8497506
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaataa 252  Q
    |||||||||||| |||||||||   |||||||| || ||||||| |||||||||| |||||||||||||  |||| |||| |||||    
T  8497421 tttttctatcatatgtaaatttggccatgttaaaaactttaaaattgtaattttgcattgaaacttgtatgttttatatttaataa 8497506  T

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Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 13495472 - 13495387
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||| |||||| ||| || ||||||   |||||||||| ||| ||||||| |||||| |||||||||    
T  13495472 gtttttctatcatgtgaaaatttgcacatgataagaagtttaaagtagtaattttgacttggaacttgtgcattttatattaaata 13495387  T

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Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 31318818 - 31318734
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||| |||||| |||||||||| || ||||| |  | ||||||| |||| |||||||||||||  |||||||||    
T  31318818 tttttctatcatgtgaaaatttgcacatgttaagaagtttaagatagaaattttgcattggaacttgtacatttaatattaaata 31318734  T

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Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 32553545 - 32553501
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    ||||||||||||||||||||||||||||||||||| || ||||||    
T  32553545 ggtttttctatcatgtgtaaatttacacatgttaagaagtttaaa 32553501  T

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Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 54527707 - 54527791
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||| ||||| |||||| |||||||||| ||||||||||    ||||||| |||| |||||||||||||  |||||||||    
T  54527707 tttttctattatgtgcaaatttgcacatgttaagaaatttaaaatataaattttgtattggaacttgtacatttaatattaaata 54527791  T

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Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 45983685 - 45983599
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||| ||||||||| |||||| |||| ||||| || |||||||  | ||||||  ||||||||||||||||||  |||||||||    
T  45983685 ggtttttttatcatgtgcaaatttgcacaggttaagaagtttaaaatagaaattttatattgaaacttgtacatttaatattaaata 45983599  T

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Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 51401619 - 51401533
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||| ||||  |||||| |||||||||| || |||||||  | ||||||| |||| |||||||||||||  |||||||||    
T  51401619 ggtttttctattatgtacaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaata 51401533  T

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Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 51567821 - 51567902
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||| |||||| |||||||   ||| |||||||  | ||||||| ||||||||||||||||||  |||||||||    
T  51567821 tttttctatcatgtgcaaatttgcacatgt---taagtttaaaatagaaattttgtattgaaacttgtacatttactattaaata 51567902  T

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Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 8165823 - 8165750
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattt 240  Q
    ||||||||||||||| |||||| |||||||||| || |||||||    ||||||| |||| |||||||||||||    
T  8165823 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatataaattttgtattggaacttgtacattt 8165750  T

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Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 35414809 - 35414894
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| ||||||||||||||||| || || ||||  |||| |||  |||| || ||||| |||||||||| ||||    
T  35414809 gtttttctatcatgtgcaaatttacacatgttaagaagttcaaaatagtaactttatattggaagttgtatattttgtatttaata 35414894  T

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Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 15269160 - 15269236
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttg 242  Q
    ||||||||||||| ||||||||| |||||||||| || |||| ||  | ||||||| ||||||| || |||||||||    
T  15269160 gtttttctatcatatgtaaatttgcacatgttaagaagtttataatagaaattttgcattgaaatttatacattttg 15269236  T

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Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 232
Target Start/End: Original strand, 55415128 - 55415182
Alignment:
Q  178 tgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaactt 232  Q
    |||||||||||| ||||||||||||||||||||  |||| ||||  |||||||||    
T  55415128 tgtgtaaatttaaacatgttaataaatttaaaacagtaaatttgttttgaaactt 55415182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 26291322 - 26291261
Alignment:
Q  190 cacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||  ||||||||||  |||| |||| |||| |||||| |||||||||||||||||    
T  26291322 cacatgttaggaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaata 26291261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 40930234 - 40930185
Alignment:
Q  161 aaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    |||| |||||||||||||||| |||||| |||||||||| || |||||||    
T  40930234 aaaaagtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaa 40930185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 3863508 - 3863464
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    ||||||||||||||||| |||||| |||||||||| || ||||||    
T  3863508 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 3863464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 11671514 - 11671558
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    ||||||||||||||||| |||||||||  |||||| |||||||||    
T  11671514 ggtttttctatcatgtggaaatttacatgtgttaaaaaatttaaa 11671558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 16875018 - 16875110
Alignment:
Q  159 aaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||| |||||||||||| |||| |||||| |||||||||| || ||||||   |||| ||| | |||||||||||   |||| |||||||||    
T  16875018 aaaaagggtttttctatcgtgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaata 16875110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 23638050 - 23638134
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||| ||||||| | |||||| |||||||||| ||||||||||  |||| || |  |||||||||||  ||||| |||||||||    
T  23638050 tttttatatcatgagcaaatttgcacatgttaagaaatttaaaatggtaagttagtcttgaaacttgtgtattttatattaaata 23638134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 37332290 - 37332206
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||| ||| ||||| ||||||||||||||| ||||||||||||  |||| ||||  || ||| ||||  ||||| |||||||||    
T  37332290 tttttttattatgtgcaaatttacacatgttgataaatttaaaatggtaagtttgtctttaaatttgtgtattttatattaaata 37332206  T

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Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 7757785 - 7757871
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||  |||| |||| |||| |||||| |||||||||||||||||    
T  7757785 ggtttttctatcatgtgcaaatttacacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaata 7757871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 38248419 - 38248505
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||  ||||||||  |||| |||||| |||||||||||||||||    
T  38248419 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattttacattggaacttgaacattttgtattaaata 38248505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 29157822 - 29157914
Alignment:
Q  159 aaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||| ||||||||||||||||| |||||| |||||||||| |||||| |||  |||| |||| |||| |||||||| |||||||||||||||    
T  29157822 aaaaagggtttttctatcatgtgcaaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgtattaaata 29157914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 5583557 - 5583643
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||| | |||||| |||||||||| ||||||||||  |||| |||| |||| |||||| |||||||||||||||||    
T  5583557 ggtttttctatcatgcgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaata 5583643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 43806539 - 43806453
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||| ||||||||||| |||||||||| || |||||||  | ||||||| ||||||||||||||||||  |||||||||    
T  43806539 ggtttttctatcgtgtgtaaatttgcacatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaata 43806453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 24729576 - 24729659
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaa 248  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||  |||| |||| |||| || ||||| ||||||||||||    
T  24729576 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgtatattttgtattaa 24729659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 4576325 - 4576411
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||  || ||||||| ||||||||||  | ||||||| ||||||||||||||||||  |||||||||    
T  4576325 ggtttttctatcatgtgcaaattcgcatatgttaagaaatttaaaatagaaattttgtattgaaacttgtacatttaatattaaata 4576411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 9747496 - 9747410
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || |||||||  |||||||||  ||| ||||||| |||||| |||||||||    
T  9747496 ggtttttctatcatgtgcaaattttcacatgttaagaagtttaaaatagtaattttgtcttggaacttgttcattttatattaaata 9747410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 36731368 - 36731314
Alignment:
Q  156 tataaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  36731368 tataataagggtttttctatcatgtgtaaatttacacatgttaagaaatttaaaa 36731314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 5853463 - 5853548
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||| |||||||||| || |||| || || ||||||| ||||||| || ||||||||||| ||||||    
T  5853463 gtttttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaata 5853548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 16493532 - 16493617
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||| |||||||||| || |||| || || ||||||| ||||||| || ||||||||||| ||||||    
T  16493532 gtttttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaata 16493617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 12919351 - 12919435
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||  |||| |||   ||||||||||| |||||| |||||||||    
T  12919351 tttttttatcatgtgcaaatttacacatgttaaaaaatttaaaatagtaactttatcttgaaacttgttcattttatattaaata 12919435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 251
Target Start/End: Original strand, 26003343 - 26003431
Alignment:
Q  163 aaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||| |||||||||||||| |||||| |||||||||| || |||||||  | ||||||| ||||||| ||||||||||  |||||||||    
T  26003343 aagggttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaatttgtacatttgatattaaata 26003431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 22704715 - 22704630
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||| ||||| |||| || |||| || || ||||||| ||||||| || ||||||||||| ||||||    
T  22704715 gtttttctatcatgtgcaaatttgcacatcttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaata 22704630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 15411624 - 15411707
Alignment:
Q  168 ttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||| |||||| |||||| |||||||||| || |||||||  |||| ||||  ||||||||||| |||||| |||||||||    
T  15411624 ttttctaacatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaata 15411707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 25948206 - 25948132
Alignment:
Q  177 atgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||| |||||| |||||||||| ||||||| || || ||||||| ||||||| || ||||||||||| ||||||    
T  25948206 atgtgcaaatttgcacatgttaagaaatttataattgaaattttgcattgaaatttatacattttgtaataaata 25948132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 29142253 - 29142167
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| ||||||||||||||| | || ||||| |  | ||||||| |||  |||||||||||||  |||||||||    
T  29142253 ggtttttctatcatgtgcaaatttacacatgtttagaagtttaatatagaaattttgtattttaacttgtacatttaatattaaata 29142167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 37471734 - 37471825
Alignment:
Q  159 aaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||| |||||||||| ||| ||| |||||| |||||||||| || |||||||  |||| ||||  ||||||||||| |||||| |||||||||    
T  37471734 aaaagaggtttttct-tcaagtgaaaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaata 37471825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 8065302 - 8065227
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattt 240  Q
    ||||||||||||||||| |||||| |||||||||| || |||||||  | ||||||  |||| || ||||||||||    
T  8065302 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaatttgtacattt 8065227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 19228601 - 19228518
Alignment:
Q  168 ttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||| |||||| |||||||||| || ||||||   |||| ||||| ||| |||||||   ||||||||||||||    
T  19228601 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaata 19228518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 20566017 - 20566060
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    |||||||||||||||| ||||||||||||||||| || ||||||    
T  20566017 gtttttctatcatgtgcaaatttacacatgttaagaagtttaaa 20566060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 43388480 - 43388555
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattt 240  Q
    ||||||||||||||||| |||||| |||||||||| || || ||||| |||  |||| |||| ||||||| |||||    
T  43388480 ggtttttctatcatgtgcaaatttgcacatgttaagaagttcaaaaaggtatgtttgcattggaacttgtgcattt 43388555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 6765177 - 6765103
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacatttt 241  Q
    ||||||||||||||||| |||| |||||||||| || ||||||||  ||| |||| |||  ||||||| ||||||    
T  6765177 tttttctatcatgtgtagatttgcacatgttaagaagtttaaaaaaataaatttgtattataacttgtgcatttt 6765103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 9450442 - 9450392
Alignment:
Q  159 aaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    ||||| ||||||||||||||||| |||| | |||||||||| |||||||||    
T  9450442 aaaaagggtttttctatcatgtgcaaatctgcacatgttaagaaatttaaa 9450392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 16126558 - 16126644
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || ||||||   |||| ||| | |||||||||||   |||| |||||||||    
T  16126558 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaata 16126644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 2060044 - 2060085
Alignment:
Q  168 ttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    |||||||| ||||| ||||||||||||||||| |||||||||    
T  2060044 ttttctatgatgtgcaaatttacacatgttaagaaatttaaa 2060085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 7720293 - 7720208
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||| ||| |||||| || ||||| |  | ||||||| |||| ||| |||||| || ||||||||||    
T  7720293 gtttttctatcatgtgcaaatttgcacgtgttaaaaagtttaagatagaaattttgtattggaacgtgtacacttagtattaaata 7720208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 14707011 - 14707044
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgtta 198  Q
    ||||||||||||||||| ||||||||||||||||    
T  14707011 ggtttttctatcatgtgcaaatttacacatgtta 14707044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 5979736 - 5979692
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    |||||||||||||||||||||||||||   |||| ||||||||||    
T  5979736 gtttttctatcatgtgtaaatttacacggattaaaaaatttaaaa 5979692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 6109568 - 6109524
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    ||||||||||||||||| |||||| |||||||||| || ||||||    
T  6109568 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 6109524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 36909419 - 36909459
Alignment:
Q  168 ttttctatcatgtgtaaatttacacatgttaataaatttaa 208  Q
    ||||||||||||||||||||| ||||||||||  |||||||    
T  36909419 ttttctatcatgtgtaaatttgcacatgttaaacaatttaa 36909459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 23576413 - 23576499
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||  |||| |||| ||||||||||| |||||||||||||||||    
T  23576413 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtattaaata 23576499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 1502719 - 1502805
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||  |||| |||| |||| || ||| |||||||||||||||||    
T  1502719 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaata 1502805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 1366225 - 1366140
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||||||||||| || ||||||||||  ||||||||| |||| || ||| |||||| ||||||||||    
T  1366225 gtttttctatcatgtgcaaatttacacatgtaaagaaatttaaaatagtaattttgtattggaatttgaacatttagtattaaata 1366140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 4607664 - 4607579
Alignment:
Q  155 ttataaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattt 240  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||| ||||||| ||  | ||||||| |||| |||||||||||||    
T  4607664 ttataaaaaaggtttttctatcatgtacaaatttacatatgttaagaaatttataatagaaattttgtattggaacttgtacattt 4607579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 30362994 - 30363080
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||| ||| ||||||||||  |||| ||||| ||| ||||||| |||||| |||||||||    
T  30362994 ggtttttctatcatgtgcaaatttgcacatgataacaaatttaaaatagtaactttgacttggaacttgtgcattttatattaaata 30363080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 36490958 - 36490872
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||| | |||||| |||||||||| || |||||||  |||| |||| |||| ||||||||||||||||||| ||||    
T  36490958 ggtttttctatcatgagcaaatttgcacatgttaagaagtttaaaatagtaactttgcattggaacttgtacattttgtatttaata 36490872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 23591876 - 23591791
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||| |||||||||| |||||| |||    || |||| |||| ||||||||||||||||||||||||    
T  23591876 gtttttctatcatgtgcaaatttgcacatgttaagaaattttaaataacaactttgcattggaacttgtacattttgtattaaata 23591791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 47355371 - 47355460
Alignment:
Q  159 aaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaa 248  Q
    |||||| |||||||||||| || |||||||||||||||||| ||||||||||   ||| |||| |||| ||||||| |||||| ||||||    
T  47355371 aaaaaatgtttttctatcacgtataaatttacacatgttaagaaatttaaaataataaatttgtattggaacttgttcattttatattaa 47355460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 6180365 - 6180279
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || |||||||  | ||||||  |||| |||||||||||||  |||||||||    
T  6180365 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgtacatttaatattaaata 6180279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 38812919 - 38812833
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || || ||||  | ||||||  ||||||||||||||||||  |||||||||    
T  38812919 ggtttttctatcatgtgcaaatttgcacatgttaagaagttcaaaatagaaattttatattgaaacttgtacatttaatattaaata 38812833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 51920431 - 51920516
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||| |||||||||||||||||||||  | ||||||  ||| ||| ||||| ||||  |||||||||    
T  51920431 gtttttctatcatgtgcaaatttgcacatgttaataaatttaaaatagaaattttatattaaaatttgtatatttaatattaaata 51920516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 251
Target Start/End: Complemental strand, 13322057 - 13321969
Alignment:
Q  163 aaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||||| |||||| || ||||||| || |||||||  | ||||||| |||| || ||||||||||  |||||||||    
T  13322057 aaggtttttctatcatgtgcaaatttgcatatgttaagaagtttaaaatagaaattttgtattggaatttgtacatttaatattaaata 13321969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 29635748 - 29635828
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtatt 246  Q
    ||||||||||||| | |||||||  ||||||||| ||||||||||  |||| |||  ||||||||||||| ||||||||||    
T  29635748 gtttttctatcatttataaatttgtacatgttaaaaaatttaaaatagtaactttatattgaaacttgtatattttgtatt 29635828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 251
Target Start/End: Original strand, 30288861 - 30288949
Alignment:
Q  163 aaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||   |||||||| | ||| |||||||   |||| |||||||||    
T  30288861 aaggtttttctatcatgtgcaaatttacacatgttaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaata 30288949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 41676555 - 41676635
Alignment:
Q  161 aaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacatttt 241  Q
    ||||| ||||||||||||||| |||||| |||||||||| ||||| ||||   |||||||| ||| |||||||| ||||||    
T  41676555 aaaagttttttctatcatgtgcaaatttgcacatgttaagaaattcaaaataataattttgtattaaaacttgtgcatttt 41676635  T

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Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 44918203 - 44918159
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||    
T  44918203 ggtttttctatcatgtgcaaatttacacatgttaagaaatttaaa 44918159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 9516758 - 9516715
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  9516758 tttttctatcatgtgtaaatttgcacatgttaagaaatttaaaa 9516715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 2222236 - 2222278
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaa 208  Q
    |||||||||||||||| ||||||||||||||||| ||||||||    
T  2222236 gtttttctatcatgtgaaaatttacacatgttaagaaatttaa 2222278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 30172058 - 30171972
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || ||||||   |||| ||||| ||| ||||||| |||||  |||||||||    
T  30172058 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaata 30171972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 30187599 - 30187513
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || ||||||   |||| ||||| ||| ||||||| |||||  |||||||||    
T  30187599 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaata 30187513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 35512904 - 35512818
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || |||||||  | ||||||  |||| |||||| ||||||  |||||||||    
T  35512904 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgcacatttaatattaaata 35512818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 10896536 - 10896488
Alignment:
Q  161 aaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    ||||||||||||||||||||||||| || |||||||||| || ||||||    
T  10896536 aaaaggtttttctatcatgtgtaaaattgcacatgttaagaagtttaaa 10896488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 34802146 - 34802090
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttg 221  Q
    ||||||||||||||||| |||||| |||||||||| || |||||||  |||||||||    
T  34802146 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatggtaattttg 34802090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 6754650 - 6754567
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaa 248  Q
    ||||||||||||||||| |||||| |||||| ||| || ||||||   |||| ||||| ||| ||||||| |||||| ||||||    
T  6754650 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaa 6754567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 13241934 - 13241891
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    ||||||||||||||| |||||| |||||||||| ||||||||||    
T  13241934 tttttctatcatgtgaaaatttgcacatgttaagaaatttaaaa 13241891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 25465337 - 25465262
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattt 240  Q
    ||||||||||||||||| |||||| |||||||||| || || ||||  |||| |||| |||| ||||||| |||||    
T  25465337 ggtttttctatcatgtgcaaatttgcacatgttaagaagttcaaaatagtaaatttgcattggaacttgtgcattt 25465262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 35438892 - 35438849
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    ||||||||||||||| |||||| |||||||||| ||||||||||    
T  35438892 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaa 35438849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 3168067 - 3168153
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||| ||||| || |||||||  | | ||| | |||| |||||||||||||  |||||||||    
T  3168067 ggtttttctatcatgtgcaaatttgcacacgttaaaaagtttaaaatagaattttagtattggaacttgtacatttaatattaaata 3168153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 199
Target Start/End: Original strand, 5879102 - 5879136
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaa 199  Q
    |||||||||||||||||||||||| ||||||||||    
T  5879102 ggtttttctatcatgtgtaaatttgcacatgttaa 5879136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 7519996 - 7520082
Alignment:
Q  166 gtttttctatcatgtgtaaa-tttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| ||| ||| |||||||||| || |||||||    || |||| ||||||| |||||||||||||||| ||||    
T  7519996 gtttttctatcatgtgcaaaattttcacatgttaagaagtttaaaataacaactttgcattgaaatttgtacattttgtatttaata 7520082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 22167514 - 22167428
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||| |||||||||| |||||| |||||| ||| || |||||||  | || |||| |||| |||||||||||||  |||||||||    
T  22167514 ggttttcctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaata 22167428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 5057180 - 5057095
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||| || || |||||| || ||||| | || ||||||   |||| ||||| |||||||||||||||||| |||||||||    
T  5057180 gtttttctattatatgcaaatttgcaaatgttcaaaagtttaaagtggtaactttgacttgaaacttgtacattttatattaaata 5057095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 25532387 - 25532302
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||| || |||||| | |||||||| || |||||||| | ||||||| ||| ||| || |||||||  |||||||||    
T  25532387 gtttttctatcatatgcaaatttgcgcatgttaaaaagtttaaaaaagaaattttgtattaaaatttatacatttaatattaaata 25532302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 39310785 - 39310830
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    ||||||||||||||||| |||||| |||||||||| || |||||||    
T  39310785 ggtttttctatcatgtgcaaatttgcacatgttaaaaagtttaaaa 39310830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 313928 - 313884
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    ||||||||||||||||| |||||| |||||||||| || ||||||    
T  313928 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 313884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 6569984 - 6570028
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    ||||||||||||||||| |||||| |||||||||| || ||||||    
T  6569984 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 6570028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 16966543 - 16966463
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtatt 246  Q
    |||||||||||||||| | ||||  ||||||||| |||||||||    ||| ||||| ||||||||||| |||||| ||||    
T  16966543 gtttttctatcatgtgcatatttgaacatgttaagaaatttaaaccgataactttgatttgaaacttgtgcattttatatt 16966463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 19066677 - 19066633
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    |||||||||||||||| ||||||| |||||||||| || ||||||    
T  19066677 ggtttttctatcatgtataaatttgcacatgttaaaaagtttaaa 19066633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 19114567 - 19114523
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    |||||||||||||||| ||||||| |||||||||| || ||||||    
T  19114567 ggtttttctatcatgtataaatttgcacatgttaaaaagtttaaa 19114523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 41617867 - 41617799
Alignment:
Q  183 aaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| ||||| ||||| |||| | || |||| ||||||| |||||  |||||||||    
T  41617867 aaatttacacatgttaaaaaattcaaaaaggtaagtatgcattggaacttgtgcatttaatattaaata 41617799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 4e-22; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 30839967 - 30839874
Alignment:
Q  158 taaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||| ||||||||||||||||| |||||| |||||||||| ||||||||||  |||| |||| |||| |||||| |||||||||||||||||    
T  30839967 taaaaagggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaata 30839874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 36597771 - 36597672
Alignment:
Q  152 tatttataaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||| || ||| ||||||||||||||||| |||||| |||||||||| ||||||||||  |||| |||| |||| |||||| |||||||||||||||||    
T  36597771 tatttttataaagggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaata 36597672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 6863735 - 6863649
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||  |||| |||  |||| |||||| |||||||||||||||||    
T  6863735 ggtttttctatcatgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttatattggaacttgaacattttgtattaaata 6863649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 23995416 - 23995501
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||| ||||| ||||||  ||||||||| || |||||||  ||||||||  |||||||||||||||||||||||||||||    
T  23995416 gtttttctattatgtgcaaatttgtacatgttaagaagtttaaaatagtaattttatattgaaacttgtacattttgtattaaata 23995501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 3398399 - 3398313
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || |||||||  | ||||||| |||| |||||||||||||  |||||||||    
T  3398399 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaata 3398313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 15820403 - 15820319
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||| ||||||||||||||| || ||||| ||||  |||| |||| ||||||| ||| ||||||| |||||||||    
T  15820403 tttttctatcatgtttaaatttacacatgtcaagaaattcaaaatagtaaatttgtattgaaatttgaacattttctattaaata 15820319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 31567493 - 31567576
Alignment:
Q  168 ttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||| || |||||| |||||||||| ||||||||||  |||||||||  |||||| |||| |||||| |||||||||    
T  31567493 ttttctatcatatgcaaatttgcacatgttaaaaaatttaaaatggtaattttgtcttgaaatttgttcattttatattaaata 31567576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 26376515 - 26376600
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||| |||||||||||| ||||||||||||| || ||| | | ||||||  ||||||||||||||||||  |||||||||    
T  26376515 ggtttttctattatgtgtaaatttgcacatgttaataagttcaaata-gaaattttatattgaaacttgtacatttaatattaaata 26376600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 13515925 - 13515969
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    |||||||||||||||||||||||| |||||||||| |||||||||    
T  13515925 ggtttttctatcatgtgtaaatttgcacatgttaacaaatttaaa 13515969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 35469732 - 35469688
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||    
T  35469732 gtttttctatcatgtgtaaatttgcacatgttaaaaaatttaaaa 35469688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 28378910 - 28378828
Alignment:
Q  168 ttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||| | |||||||||||||||||| ||||||||||| |||| |||  |||||||| | | ||||| ||||||||||    
T  28378910 ttttctatcatatataaatttacacatgttaaaaaatttaaaaa-gtaaatttatattgaaacgtatgcatttagtattaaata 28378828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 2795702 - 2795616
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || ||||||   |||| ||||| ||| |||||||   ||||||||||||||    
T  2795702 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaata 2795616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 15837453 - 15837368
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||| |  |||||||||| |||||| |||  |||||  |||| |||| |||||||||||| |||||| |||||||||    
T  15837453 gtttttctatcatatccaaatttacacttgttaagaaaactaaaatagtaaatttgtattgaaacttgtgcattttatattaaata 15837368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 32019984 - 32020069
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||| |||||||||| ||||||||||  |||| ||||  ||| |||||||  ||| | |||||||||    
T  32019984 gtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatggtaagtttgtcttggaacttgtgtattctatattaaata 32020069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 40166459 - 40166375
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||| ||||| |||||| || |||||||||||| ||||   | || | || |||||||||||||||||||||||||||||    
T  40166459 gtttttctattatgtgcaaatttgca-atgttaataaatctaaattagcaactatgtattgaaacttgtacattttgtattaaata 40166375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 8103579 - 8103662
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaa 248  Q
    ||||||||||||||||| |||||| |||||| ||| || ||||||   |||| ||||| ||| ||||||| |||||| ||||||    
T  8103579 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaa 8103662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 11636910 - 11636835
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattt 240  Q
    ||||||||||||||||| |||||| |||||| ||| || ||||||   |||| ||||| ||||||||||| |||||    
T  11636910 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgcattt 11636835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 15191050 - 15190983
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgt 234  Q
    ||||| |||||||| ||||||| |||||||||| || ||||||   |||||||||| |||||||||||    
T  15191050 tttttttatcatgtataaatttgcacatgttaagaagtttaaagtagtaattttgacttgaaacttgt 15190983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 29628492 - 29628535
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    |||||||||||| || |||||||||| |||||||||||||||||    
T  29628492 tttttctatcatatgcaaatttacacgtgttaataaatttaaaa 29628535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 4047597 - 4047547
Alignment:
Q  159 aaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    ||||| ||||||||||||||||| |||||| |||||||||| || ||||||    
T  4047597 aaaaagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 4047547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 40513126 - 40513044
Alignment:
Q  169 tttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||  |||||| |||||||||| ||||||||||  |||| |||| |||| || ||| | ||||||||| |||||    
T  40513126 tttctatcatgtacaaatttgcacatgttaaaaaatttaaaatagtaactttgcattggaatttgaatattttgtatcaaata 40513044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 40980566 - 40980488
Alignment:
Q  151 ctatttataaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaa 229  Q
    |||| ||||| ||| |||||||||||||||| |||||| ||||| |||| || |||||||  | ||||||| |||||||    
T  40980566 ctatatataataaaagtttttctatcatgtgcaaatttgcacatattaaaaagtttaaaatagaaattttgtattgaaa 40980488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 16174623 - 16174696
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattt 240  Q
    |||||||||||| || |||||| |||||  ||| |||||||||   |||| ||||||||||||||||| |||||    
T  16174623 tttttctatcatttgcaaatttgcacatcataagaaatttaaagtagtaactttgaattgaaacttgtgcattt 16174696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 14466495 - 14466579
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||| ||||||| ||||||||| || ||||||   |||| ||| | |||||||||||   |||| |||||||||    
T  14466495 tttttctatcatgtgcaaatttagacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaata 14466579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 15240943 - 15241035
Alignment:
Q  159 aaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||| |||||||||||||||| ||||||  ||||||||| || || ||||   ||| |||| ||||||| |||| ||| || |||||||||    
T  15240943 aaaaaaagtttttctatcatgtgcaaatttgtacatgttaaaaagttcaaaatattaaatttgtattgaaatttgtgcatgttatattaaata 15241035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 24014697 - 24014773
Alignment:
Q  175 tcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||| |||||| |||||||||| || ||| |||  |||| ||   ||||||||||||| |||||||||||||||    
T  24014697 tcatgtgaaaatttgcacatgttaaaaagttttaaatagtaacttcacattgaaacttgtatattttgtattaaata 24014773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 29855898 - 29855930
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaa 199  Q
    |||||||||||||||||||||| ||||||||||    
T  29855898 tttttctatcatgtgtaaatttgcacatgttaa 29855930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 30893805 - 30893741
Alignment:
Q  168 ttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaactt 232  Q
    |||||||||||||| |||||| |||||||||| || |||||||  |||| ||||| || ||||||    
T  30893805 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgacttaaaactt 30893741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 3306054 - 3306140
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||  |||| |||| ||||||||||| ||||||||||| |||||    
T  3306054 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtatcaaata 3306140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 9580103 - 9580194
Alignment:
Q  160 aaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||| ||||||| ||||||||| ||||||||||||||||| || |||||||  | ||||||| ||||||||||||||||||  |||||||||    
T  9580103 aaaagggtttttttatcatgtgcaaatttacacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaata 9580194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 2161566 - 2161480
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||  |||| |||| |||| |||||| |||||||| ||||||||    
T  2161566 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgaattaaata 2161480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 43717551 - 43717637
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| ||||||||||||||||| || || ||||| |||| ||||||| | ||||||| ||||| ||||||||||    
T  43717551 ggtttttctatcatgtgcaaatttacacatgttaagaatttcaaaaaagtaagtttgaatgggaacttgtgcatttagtattaaata 43717637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 15198899 - 15198985
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| |||||| |||  |||| |||| |||| |||||||| |||||| ||||||||    
T  15198899 ggtttttctatcatgtgcaaatttgcacatgttaaaaaattttaaatagtaactttgcattgtaacttgtatattttgaattaaata 15198985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 28014857 - 28014943
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || |||||||  | ||||||| |||| |||||||||||||  |||||||||    
T  28014857 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaata 28014943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 26682247 - 26682162
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaat 250  Q
    ||||||||||||||||| |||||| |||||||||| |||||||||   |||| ||||| ||| ||||||| |||||| ||||||||    
T  26682247 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaat 26682162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 40225987 - 40226072
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||| |||||||||| || |||| || || ||||||| ||||||| || ||||||||||| ||||||    
T  40225987 gtttttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaata 40226072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 14961652 - 14961748
Alignment:
Q  155 ttataaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||| |||| ||||||||||||||||| |||||| |||||| ||| || |||||||  ||||||||| |||| ||||||| ||||||  ||||||||    
T  14961652 ttattaaaagggtttttctatcatgtgcaaatttgcacatgctaagaagtttaaaatagtaattttgtattggaacttgtgcattttaaattaaata 14961748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 26363989 - 26364072
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaa 248  Q
    ||||||||||||||||| |||||| | |||||||| ||||||||||  |||| |||| |||| |||||| ||||||| ||||||    
T  26363989 ggtttttctatcatgtgcaaatttgcgcatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttctattaa 26364072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 38843896 - 38843797
Alignment:
Q  152 tatttataaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||| || |||||||||||||||||||||||| |||||| ||| || |||||||    ||||||  |||| |||||||||||||  |||||||||    
T  38843896 tatttataagaagggtttttctatcatgtgtaaatttgcacatgctaagaagtttaaaatataaattttttattggaacttgtacatttaatattaaata 38843797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 26834740 - 26834654
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| || || |||| ||||||||||  |||||||||| ||| ||||||| |||||  |||||||||    
T  26834740 ggtttttctatcatgtgcaaatttgcatatattaagaaatttaaaatggtaattttgacttggaacttgtgcatttcatattaaata 26834654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 27874680 - 27874766
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || |||||||    ||||||| |||| |||||||||||||  |||||||||    
T  27874680 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatacaaattttgtattggaacttgtacatttaatattaaata 27874766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 31812292 - 31812206
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| ||||| |||| || |||||||  |||||||||| ||| ||||||| |||||  |||||||||    
T  31812292 ggtttttctatcatgtgcaaatttgcacatattaagaagtttaaaatggtaattttgacttggaacttgtgcatttcatattaaata 31812206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 38212944 - 38213029
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||| |||||||||| || |||||||  | ||||||  |||||||||||||||| |  |||||||||    
T  38212944 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattgaaacttgtacatgtaatattaaata 38213029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 12132168 - 12132076
Alignment:
Q  159 aaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||| |||||||||||||| || ||| || |||||||||| |||||||||   |||| |||| |||| |||||| ||||||| |||||||||    
T  12132168 aaaaagggtttttctatcatctgcaaacttgcacatgttaagaaatttaaagtagtaagtttgtattggaacttgaacattttatattaaata 12132076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 26195259 - 26195346
Alignment:
Q  166 gtttttctatcatgtgtaaattt--acacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||||||||||  |||||||||||||||||||||    | | ||||  ||||||||||| |||||| |||||||||    
T  26195259 gtttttctatcatgtgtaaatttacacacatgttaataaatttaaagtgatgagtttgtcttgaaacttgtgcattttatattaaata 26195346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 20514809 - 20514726
Alignment:
Q  168 ttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||| | |||| |||| ||||| ||||||||||  |||| ||||  ||| |||||||||||||| |||||||||    
T  20514809 ttttctatcatgtgcatatttgcacaggttaagaaatttaaaatggtaagtttgtcttggaacttgtacattttatattaaata 20514726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 4080386 - 4080468
Alignment:
Q  159 aaaaaagg-tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattt 240  Q
    |||||||| ||||||||||||||| |||||| |||||| ||| |||||||||   |||| ||||| ||||||||||| |||||    
T  4080386 aaaaaaggatttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt 4080468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 18567401 - 18567459
Alignment:
Q  151 ctatttataaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    ||||||||||| | ||||||||||||||||| |||||| |||||||||| || ||||||    
T  18567401 ctatttataaatagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 18567459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 250
Target Start/End: Complemental strand, 44091494 - 44091412
Alignment:
Q  168 ttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaat 250  Q
    ||||||||||||||||||||| || ||||||| |||||||||   |||| ||||| ||  ||||||| |||||| ||||||||    
T  44091494 ttttctatcatgtgtaaatttgcatatgttaagaaatttaaagtagtaactttgatttagaacttgtgcattttatattaaat 44091412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 251
Target Start/End: Original strand, 39701799 - 39701888
Alignment:
Q  162 aaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||||||| |||||| |||||||||| || ||||||   |||| ||||| |||||| ||||   |||| |||||||||    
T  39701799 aaaggtttttctatcatgtgcaaatttgcacatgttaacaagtttaaagtagtaactttgacttgaaatttgtgttttttatattaaata 39701888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 297256 - 297188
Alignment:
Q  183 aaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||| |||||||||| || |||||||   ||| |||| |||||||||||||||||||||||| ||||    
T  297256 aaatttgcacatgttaagaagtttaaaataataactttgtattgaaacttgtacattttgtatttaata 297188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 251
Target Start/End: Original strand, 12189585 - 12189673
Alignment:
Q  163 aaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||||| |||||| |||||| ||| || |||||||  | || |||  |||| |||||||||||||  |||||||||    
T  12189585 aaggtttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaata 12189673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 251
Target Start/End: Original strand, 12434013 - 12434101
Alignment:
Q  163 aaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||||| |||||| |||||| ||| || |||||||  | || |||  |||| |||||||||||||  |||||||||    
T  12434013 aaggtttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaata 12434101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 13327942 - 13328026
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||| |||||| |||||||||| || ||||||   |||| ||||| |||||||||||   |||| |||||||||    
T  13327942 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaata 13328026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 37389539 - 37389455
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||| ||||||||||||| ||| ||||| |||||||||    ||| ||||  ||||||||||| |||||| |||||||||    
T  37389539 tttttctataatgtgtaaatttatacaagttaagaaatttaaattaataactttgttttgaaacttgttcattttatattaaata 37389455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 7978057 - 7977990
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaactt 232  Q
    |||||||||||||| || |||||| || ||||||| || |||||||  ||||||||| ||||||||||    
T  7978057 ggtttttctatcatatgcaaatttgcaaatgttaaaaagtttaaaatggtaattttgtattgaaactt 7977990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 251
Target Start/End: Complemental strand, 10129287 - 10129196
Alignment:
Q  160 aaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||| ||||||||||||||||| |||||| |||||||||| || ||||||   |||||||| | ||| |||||||   |||| |||||||||    
T  10129287 aaaagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaata 10129196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 12958679 - 12958592
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaataa 252  Q
    ||||||||||||||||| ||||||  |||| |||| ||  |||||| |||||| ||  |||||| ||||||| ||||||| |||||||    
T  12958679 ggtttttctatcatgtgcaaatttgtacatattaagaagcttaaaattgtaatgttacattgaagcttgtactttttgtactaaataa 12958592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 4084535 - 4084609
Alignment:
Q  159 aaaaaagg-tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaactt 232  Q
    |||||||| ||||||||||||||| |||||| |||||| ||| |||||||||   |||| ||||| |||||||||    
T  4084535 aaaaaaggatttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaactt 4084609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 4102842 - 4102916
Alignment:
Q  159 aaaaaagg-tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaactt 232  Q
    |||||||| ||||||||||||||| |||||| |||||| ||| |||||||||   |||| ||||| |||||||||    
T  4102842 aaaaaaggatttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaactt 4102916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 5573465 - 5573383
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtatta 247  Q
    ||||||||||||||||| ||||||  ||||||||| || |||||||   || ||||| |||  ||||| ||||||||||||||    
T  5573465 ggtttttctatcatgtgcaaatttgtacatgttaagaagtttaaaataatacttttgcattagaacttatacattttgtatta 5573383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 19343835 - 19343905
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgta 235  Q
    ||||||| ||||||||| |||||| |||||||||| |  ||||||   |||||||||| ||||||||||||    
T  19343835 ggtttttttatcatgtgcaaatttgcacatgttaacacgtttaaagtagtaattttgacttgaaacttgta 19343905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 251
Target Start/End: Original strand, 36967077 - 36967155
Alignment:
Q  173 tatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||| |||||| |||||||||| || |||||||  | || |||| ||||||||||| ||||||  |||||||||    
T  36967077 tatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaactttgtattgaaacttgcacatttaatattaaata 36967155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 7140451 - 7140544
Alignment:
Q  158 taaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||| ||||||||||||||||| |||||| ||||| |||| || ||||||   |||||||| | ||| |||||||   |||| |||||||||    
T  7140451 taaaaagggtttttctatcatgtgcaaatttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaata 7140544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 234
Target Start/End: Original strand, 14816125 - 14816194
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgt 234  Q
    ||||||||||||||||| |||||| |||||| ||| |||||||||   |||| ||||| || ||||||||    
T  14816125 ggtttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgt 14816194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 234
Target Start/End: Complemental strand, 14829615 - 14829546
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgt 234  Q
    ||||||||||||||||| |||||| |||||| ||| |||||||||   |||| ||||| || ||||||||    
T  14829615 ggtttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgt 14829546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 22838408 - 22838359
Alignment:
Q  161 aaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    |||| |||||||||||||||| |||||| |||||||||| || |||||||    
T  22838408 aaaatgtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaa 22838359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 41979875 - 41979948
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattt 240  Q
    |||||||||| |||| |||||||||||| |||| ||||||||||    | ||||| ||||||||||| ||||||    
T  41979875 tttttctatcctgtgcaaatttacacatattaagaaatttaaaataaaatttttgtattgaaacttgcacattt 41979948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 248
Target Start/End: Complemental strand, 6818201 - 6818113
Alignment:
Q  160 aaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaa 248  Q
    |||| ||||||||||||||||| ||||||  ||||||||| || |||||||  ||||  ||| || | ||||||| |||||| ||||||    
T  6818201 aaaagggtttttctatcatgtgcaaatttgtacatgttaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaa 6818113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 234
Target Start/End: Complemental strand, 9825131 - 9825063
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgt 234  Q
    ||||||||||||||||||||| | |||||||||| ||| ||||||  |||  ||||  |||||||||||    
T  9825131 gtttttctatcatgtgtaaatatgcacatgttaaaaaaattaaaatggtaggtttgtcttgaaacttgt 9825063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 11946921 - 11946953
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaa 199  Q
    |||||||||||||||||||||| ||||||||||    
T  11946921 tttttctatcatgtgtaaatttgcacatgttaa 11946953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 13496709 - 13496753
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    |||||||||||||||| |||||| |||||||||| || |||||||    
T  13496709 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaa 13496753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 33343167 - 33343081
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||  |||| |||| |||| |||||| |||||||||||||||||    
T  33343167 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgtattggaacttgaacattttgtattaaata 33343081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 34270440 - 34270354
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||  |||| |||| |||| |||||| |||||||||||||||||    
T  34270440 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaata 34270354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 46290189 - 46290103
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||  |||| |||| |||| |||||| |||||||||||||||||    
T  46290189 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaata 46290103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 251
Target Start/End: Original strand, 8091308 - 8091397
Alignment:
Q  162 aaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||||||| ||||||||||||||||| || |||||||  |||| |||| |||| ||||| |||||||||| |||||||    
T  8091308 aaaggtttttctatcatgtgcaaatttacacatgttaagaagtttaaaatagtaactttgcattgtaacttttacattttgtgttaaata 8091397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 26300749 - 26300665
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaat 250  Q
    ||||||| |||||||  |||||| |||||||||| || |||||||  |||| |||||||||||||||||| ||||||||||||||    
T  26300749 gtttttccatcatgtacaaatttgcacatgttaaaaagtttaaaatagtaactttgaattgaaacttgtatattttgtattaaat 26300665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 4969952 - 4969866
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || |||||||  | ||||||| |||| |||||||||||||  |||||||||    
T  4969952 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaata 4969866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 33072160 - 33072074
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| ||||||  ||||||||| ||||||||||  |||| |||| |||| || ||| |||||||||||||||||    
T  33072160 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaata 33072074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 25709392 - 25709484
Alignment:
Q  159 aaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||| |||||||||||||||| |||||| |||||||||| || |||||||  |||| |||| |||| ||||||| |||||  |||||||||    
T  25709392 aaaaaaagtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtattggaacttgttcatttcatattaaata 25709484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 47707901 - 47707969
Alignment:
Q  183 aaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||| || ||||||| || |||||||  |||||||||||||||||||| ||||||||||||||||||    
T  47707901 aaattttcatatgttaagaagtttaaaatagtaattttgaattgaaacttatacattttgtattaaata 47707969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 28323311 - 28323228
Alignment:
Q  168 ttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||||||||||||||||||| ||||||||||   |||||||  |||  ||||| |||||||| |||| ||||    
T  28323311 ttttctatcatgtgtaaatttacacatgttaaaaaatttaaaataataattttatattagaacttatacattttatatttaata 28323228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 12085923 - 12086016
Alignment:
Q  158 taaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||| ||||||||||||||||| |||||| |||||  ||| || |||||| | |||||||||| |||||||||||   |||| |||||||||    
T  12085923 taaaaagggtttttctatcatgtgcaaatttgcacataataagaagtttaaataagtaattttgacttgaaacttgtgttttttatattaaata 12086016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 29398134 - 29398219
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||  |||||| |||||||||| || |||||||  | ||||||| |||| |||||||||||||  |||||||||    
T  29398134 gtttttctatcatgttcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaata 29398219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 45501637 - 45501552
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||| ||||| |||| || |||||||  | ||||||| |||| |||||||||||||  |||||||||    
T  45501637 gtttttctatcatgtgcaaatttgcacatcttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaata 45501552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 7899487 - 7899571
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||| |||||| |||||||||| ||||||||||  |||| ||||  ||  |||||||| ||||| |||||||||    
T  7899487 tttttctatcatgtgcaaatttgcacatgttaaaaaatttaaaatggtaagtttgtcttataacttgtatattttatattaaata 7899571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 41331458 - 41331541
Alignment:
Q  168 ttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||| |||||| |||||| ||| |||||||||   |||| ||||| ||| ||||||| |||||| |||||||||    
T  41331458 ttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaata 41331541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 5909281 - 5909367
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||||||||||| |||||| ||| || ||||||   |||| ||||| |||||||||||   |||| |||||||||    
T  5909281 ggtttttctatcatgtgtaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaata 5909367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 9332140 - 9332054
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || ||||||   |||| ||||| |||||||||||   |||| |||||||||    
T  9332140 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaata 9332054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 23982754 - 23982840
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||| ||||| |||||||||   |||| ||||| ||| |||||||  ||||| |||||||||    
T  23982754 ggtttttctatcatgtgcaaatttgcacacgttaagaaatttaaagtagtaactttgacttggaacttgtgtattttatattaaata 23982840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 2341932 - 2341883
Alignment:
Q  161 aaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    |||| ||||||||||||||| ||||||| |||||||||| ||||||||||    
T  2341932 aaaaagtttttctatcatgtataaatttgcacatgttaaaaaatttaaaa 2341883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 26037269 - 26037197
Alignment:
Q  168 ttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattt 240  Q
    |||||||||||||| |||||| || ||||||| || |||||||  | ||||||| |||| |||||||||||||    
T  26037269 ttttctatcatgtgcaaatttgcagatgttaagaagtttaaaatagaaattttgtattggaacttgtacattt 26037197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 32117993 - 32117949
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    ||||||||||||||||| |||||| |||||||||| |||||||||    
T  32117993 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 32117949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 47457460 - 47457504
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    ||||||||||||||||| |||||| |||||||||| |||||||||    
T  47457460 ggtttttctatcatgtgcaaatttgcacatgttaaaaaatttaaa 47457504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 7170181 - 7170098
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaa 248  Q
    ||||||||||||||||| |||||| |||||| ||| || ||||||   |||| ||||| ||| ||||||| |||||| ||||||    
T  7170181 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaa 7170098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 8595075 - 8595032
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    |||||||||||||||| ||||||||||||||||| || ||||||    
T  8595075 gtttttctatcatgtgcaaatttacacatgttaagaagtttaaa 8595032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 26050462 - 26050505
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    ||||||||||||||| |||||| |||||||||| ||||||||||    
T  26050462 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaa 26050505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 26059821 - 26059864
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    ||||||||||||||| |||||| |||||||||| ||||||||||    
T  26059821 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaa 26059864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 208
Target Start/End: Complemental strand, 44807078 - 44807035
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaa 208  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||    
T  44807078 ggtttttctatcatgtgcaaatttgcacatgataataaatttaa 44807035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 24462958 - 24463040
Alignment:
Q  169 tttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||| |||||| |||||||||| || |||||||   ||| ||||| || ||  ||||||||||| |||||||||    
T  24462958 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaataataactttgacttaaagtttgtacattttatattaaata 24463040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 36032542 - 36032628
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||| ||||| |||||| |||||||||| ||||||||||    ||||||| |||| | ||| |||||||  |||||||||    
T  36032542 ggtttttctattatgtgaaaattttcacatgttaagaaatttaaaataaaaattttgtattggatcttatacatttgatattaaata 36032628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 39757109 - 39757195
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || |||||||  |||| ||| | |||||| ||||   |||| |||||||||    
T  39757109 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaacttgaaatttgtgttttttatattaaata 39757195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 820540 - 820585
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    ||||||||||||||||| |||||| |||||||||| || |||||||    
T  820540 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaa 820585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 3561877 - 3561921
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    ||||||||||||||||| |||||| |||||||||| || ||||||    
T  3561877 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 3561921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 14228125 - 14228211
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||  |||| |||| |||| |||||| |||||||||||||||||    
T  14228125 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaata 14228211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 17552586 - 17552672
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||  |||||| || |||| |||||| |||||||||||||||||    
T  17552586 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattatgcattggaacttgaacattttgtattaaata 17552672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 28943768 - 28943854
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||  |||| |||| |||| |||||| |||||||||||||||||    
T  28943768 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaata 28943854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 30591163 - 30591247
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaat 250  Q
    |||||||||||||||| ||||||||||||||||| || ||| |||  ||||||||| |||| |||||||| ||||||||||||||    
T  30591163 gtttttctatcatgtgcaaatttacacatgttaagaagttttaaatggtaattttgcattgtaacttgtatattttgtattaaat 30591247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 31169762 - 31169848
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||||||||||| |||||||||| |||||||||   |||| ||||| ||| ||||||| |||||| |||||||||    
T  31169762 ggtttttctatcatgtgtaaatttgcacatgttaacaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaata 31169848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 33017903 - 33017817
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||| ||||| |||||| |||||||||| ||||||||||  |||| |||| || | |||||| |||||||||||||||||    
T  33017903 ggtttttctattatgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaata 33017817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 34692533 - 34692447
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || |||||||  | ||||||| |||| |||||||||||||  |||||||||    
T  34692533 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaata 34692447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 10887207 - 10887122
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||| |||||||||| || ||||||   |||||||||| ||| |||||||  ||||| |||||||||    
T  10887207 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgatttggaacttgtgtattttatattaaata 10887122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 251
Target Start/End: Original strand, 1017775 - 1017863
Alignment:
Q  164 aggtttttct-atcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||| | |||||||||||||||||||||||| || ||||||   |||| ||||| |||||| |||| |||||| |||||||||    
T  1017775 aggtttttcttaacatgtgtaaatttacacatgttaagaagtttaaagtagtaactttgacttgaaagttgtgcattttatattaaata 1017863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 8977467 - 8977551
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||||||||| ||| |||||| || || ||||  |||| |||| |||| ||||||| |||||| |||||||||    
T  8977467 tttttctatcatgtgtaaatttgcacttgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaata 8977551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 31568289 - 31568219
Alignment:
Q  164 aggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgt 234  Q
    |||||||||||||||||| |||||| |||||||||| || ||||||   |||| ||||| |||||||||||    
T  31568289 aggtttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttgatttgaaacttgt 31568219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 3261257 - 3261212
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    ||||||||||||||||| ||||||||||||||||| || |||||||    
T  3261257 ggtttttctatcatgtgcaaatttacacatgttaaaaagtttaaaa 3261212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 3853122 - 3853078
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    ||||||||||||||||| |||||| |||||||||| |||||||||    
T  3853122 ggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 3853078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 6017033 - 6016949
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||| |||||| |||||||||| || ||||||   |||| ||||| ||| ||||||| |||||  |||||||||    
T  6017033 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaata 6016949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 31069583 - 31069667
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||| ||||||||||||||||| || ||||||   |||| ||||| ||| |||||||   |||| |||||||||    
T  31069583 tttttctatcatgtgcaaatttacacatgttaagaagtttaaattagtaactttgacttggaacttgtgttttttatattaaata 31069667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 4372017 - 4371935
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaa 249  Q
    |||||||||||||| | ||||||||||||||||| || |||||||  | ||||||| |||| |||||| ||||||  |||||||    
T  4372017 gtttttctatcatgcgcaaatttacacatgttaagaagtttaaaatagaaattttgtattg-aacttgcacatttaatattaaa 4371935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 18332687 - 18332773
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || ||||||    ||||||||| ||| ||||| | |||||  |||||||||    
T  18332687 ggtttttctatcatgtgcaaattttcacatgttaagaagtttaaagtgataattttgacttggaacttatgcatttcatattaaata 18332773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 29863300 - 29863346
Alignment:
Q  164 aggtttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    |||||||||||||||||| |||||| |||||||||| || |||||||    
T  29863300 aggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaa 29863346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 12454244 - 12454199
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    |||||||||||||| ||||||||| ||||| |||| ||||||||||    
T  12454244 ggtttttctatcatatgtaaatttgcacattttaaaaaatttaaaa 12454199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 27819627 - 27819712
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||  |||||| |||||||||| || ||||||| |||| |||||  || |||||| | |||||| || ||||||    
T  27819627 gtttttctatcatgtacaaatttgcacatgttaagaagtttaaaattgtatttttgtcttaaaacttattcattttatactaaata 27819712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 17154793 - 17154757
Alignment:
Q  174 atcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  17154793 atcatttgtaaatttacacatgttaaaaaatttaaaa 17154757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 29065421 - 29065469
Alignment:
Q  162 aaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    |||||||||||||||||||| ||| || |||||||||| || |||||||    
T  29065421 aaaggtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaaa 29065469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 29120274 - 29120322
Alignment:
Q  162 aaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    |||||||||||||||||||| ||| || |||||||||| || |||||||    
T  29120274 aaaggtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaaa 29120322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 31040507 - 31040547
Alignment:
Q  159 aaaaaaggtttttctatcatgtgtaaatttacacatgttaa 199  Q
    ||||| ||||||||||| |||||||||||| ||||||||||    
T  31040507 aaaaatggtttttctataatgtgtaaattttcacatgttaa 31040547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 39877009 - 39876923
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||  |||| |||| |||| |||||| ||||||||||| |||||    
T  39877009 ggtttttctatcatgtgtaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtatcaaata 39876923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 50352481 - 50352395
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||| || |||||| |||||||||| ||||||||||  ||||||||| |||| |||||| |||||||||||||||||    
T  50352481 ggtttttctatcatatgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaacttgaacattttgtattaaata 50352395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 51691520 - 51691434
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||||||||||| |||||||||| |||||| |||  |||| |||| |||| |||||||| |||||| ||||||||    
T  51691520 ggtttttctatcatgtgtaaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgaattaaata 51691434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 40049743 - 40049651
Alignment:
Q  159 aaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||| ||||||||||| ||||| |||||| |||||||||| ||||||||||  ||||||||| |||| |||||  ||||||| |||||||||    
T  40049743 aaaaagggtttttctattatgtgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaactttaacattttttattaaata 40049651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 52391475 - 52391391
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||||||||| |||||||||| || |||||||  | ||||||| |||| |||||||||||||  |||||||||    
T  52391475 tttttctatcatgtgtaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaata 52391391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 19468382 - 19468287
Alignment:
Q  156 tataaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||| ||| ||||||||||| ||||| |||||| |||||||||| || |||||||  | ||||||| ||||||||||||||||||  |||||||||    
T  19468382 tatataaagggtttttctattatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaata 19468287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 251
Target Start/End: Complemental strand, 27019444 - 27019353
Alignment:
Q  160 aaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||| ||||||||||||||||| |||||| || ||||||| || |||||||  | ||||||| ||||||||||||||||||  |||||||||    
T  27019444 aaaagggtttttctatcatgtgcaaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaata 27019353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 9759141 - 9759227
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||  |||||| |||||||||| ||||||||||  |||| |||| |||| || ||| |||||||||||||||||    
T  9759141 ggtttttctatcatgtacaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaagttgaacattttgtattaaata 9759227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 18882266 - 18882352
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || |||||||  | ||||||| |||| |||||||||||||  |||||||||    
T  18882266 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaata 18882352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 34941457 - 34941371
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||||  ||||| |||||| ||| || |||||||  ||||||||| |||| ||||||||||||||||||| ||||    
T  34941457 ggtttttctatcatgtgcgaatttgcacatgataagaagtttaaaatagtaattttgcattggaacttgtacattttgtatttaata 34941371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 4779436 - 4779521
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||| |||||||||| || |||| || || ||||||| ||||||| || ||||||||||| ||||||    
T  4779436 gtttttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaata 4779521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 10658417 - 10658502
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||| |||||||||  ||||| |||||||||| ||||||||||  |||| |||  ||||||||||| |||||||||||||||||    
T  10658417 gtttttttatcatgtgctaatttgcacatgttaaaaaatttaaaatagtaactttacattgaaacttgaacattttgtattaaata 10658502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 10872562 - 10872647
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||| |||||||||  ||||| |||||||||| ||||||||||  |||| |||  ||||||||||| |||||||||||||||||    
T  10872562 gtttttttatcatgtgctaatttgcacatgttaaaaaatttaaaatagtaactttacattgaaacttgaacattttgtattaaata 10872647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 19450889 - 19450985
Alignment:
Q  155 ttataaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||  ||||||||||| ||||| |||||| |||||||||| || |||||||  | ||||||| |||| |||||||||||||  |||||||||    
T  19450889 ttataaaatgggtttttctattatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaata 19450985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 24685012 - 24684930
Alignment:
Q  169 tttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||| |||||| |||||||||| || |||||||  | ||||||| |||| |||||||||||||  |||||||||    
T  24685012 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgtacatttaatattaaata 24684930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 23545654 - 23545569
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||| ||||||||||||| |||||||    ||||||| |||| || ||||||||||  |||||||||    
T  23545654 gtttttctatcatgtgcaaatttgcacatgttaataagtttaaaatataaattttgtattggaaattgtacatttaatattaaata 23545569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 36971452 - 36971367
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||| ||| |||||||| |||||||| ||||||||||  |||| |||   ||||||||||| |||||| |||||||||    
T  36971452 gtttttctatcaagtgcaaatttacgcatgttaagaaatttaaaatagtaactttatcttgaaacttgttcattttatattaaata 36971367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 16667385 - 16667469
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||| |||||| |||||||||| || |||||||   ||||||| | |||||||||||  ||||| |||||||||    
T  16667385 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatgataattttaacttgaaacttgtgtattttatattaaata 16667469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 55814041 - 55813957
Alignment:
Q  167 tttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||| |||||| || |||||| |||||||||| || |||||||   |||||||| ||||||| ||||||||| |||||||||||    
T  55814041 tttttgtatcatatgcaaatttgcacatgttaaaaagtttaaaataataattttgtattgaaatttgtacattctgtattaaata 55813957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 17410003 - 17409917
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||| ||| || |||||||  | || |||| |||| |||||||||||||  |||||||||    
T  17410003 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaata 17409917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 27362570 - 27362484
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || ||||||   |||||||||| ||| || |||| |||||  |||||||||    
T  27362570 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaatttgtgcatttcatattaaata 27362484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 44916642 - 44916728
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| ||||| |||| ||||||||||  | ||||||| |||  |||||| ||||||  |||||||||    
T  44916642 ggtttttctatcatgtgcaaatttgcacatattaaaaaatttaaaatagaaattttgtattagaacttgcacatttaatattaaata 44916728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 49181251 - 49181165
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| ||| |||||| || || ||||  |||| |||| |||| ||||||| |||||| |||||||||    
T  49181251 ggtttttctatcatgtgcaaatttgcacctgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaata 49181165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 8736805 - 8736854
Alignment:
Q  160 aaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    |||| |||||||||||| ||||||||||| |||||||||| |||||||||    
T  8736805 aaaagggtttttctatcgtgtgtaaatttgcacatgttaagaaatttaaa 8736854  T

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Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 234
Target Start/End: Original strand, 23051381 - 23051450
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgt 234  Q
    ||||||||||||||||| |||||| |||||| ||| |||||||||   |||| ||||| |||||||||||    
T  23051381 ggtttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgt 23051450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 46803977 - 46803892
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||| ||||| |||| || |||||||| |||| |||   ||||||||||||| |||  |||||||||    
T  46803977 gtttttctatcatgtgcaaatttgcacatattaaaaagtttaaaaaagtaagtttacgttgaaacttgtacgtttaatattaaata 46803892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 27756746 - 27756654
Alignment:
Q  159 aaaaaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||| ||||||||  ||||||||| ||||||| |||||||||   | || ||||  |||||||||||| ||| | |||||||||    
T  27756746 aaaaaaggtttttttatcatgtacaaatttacaaatgttaagaaatttaaagtagcaagtttgtcttgaaacttgtatattctatattaaata 27756654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 29190812 - 29190884
Alignment:
Q  162 aaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgt 234  Q
    |||||||||||||||||||| |||||| |||||||||| || ||||||   |||| ||||| ||| |||||||    
T  29190812 aaaggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttggaacttgt 29190884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 33632202 - 33632287
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||||  ||||| |||||||||| ||| || |||||  || |||  ||||||||||||||||||  |||||||||    
T  33632202 ggtttttctatcatgtgcgaatttgcacatgttaa-aaagtttaaaatagaaatttatattgaaacttgtacatttaatattaaata 33632287  T

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Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 251
Target Start/End: Complemental strand, 38222461 - 38222379
Alignment:
Q  170 ttctatcatgtgtaaatttacacatgttaataaatttaaaaatgt-aattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||| || ||||||||||||||||| ||| |||||| ||| ||||||| ||| ||| ||||  ||||| |||||||||    
T  38222461 ttctatcatctgcaaatttacacatgttaaaaaaattaaaattgtaaattttgtattaaaatttgtggattttatattaaata 38222379  T

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Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 54495636 - 54495722
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || ||||||   |||| ||| | ||| ||||||| |||||  |||||||||    
T  54495636 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttaacttggaacttgtgcatttcatattaaata 54495722  T

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Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 1378195 - 1378111
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||| ||| || ||| |||||||||| ||||||||||  |||| |||   |||||||||||||||||  |||||||||    
T  1378195 gtttttctatcaggtgcaa-tttgcacatgttaagaaatttaaaatggtaaatttatcttgaaacttgtacatttaatattaaata 1378111  T

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Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 19838691 - 19838776
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||| ||||||||| |||||| ||||||||||    |||||||  | ||||||| |||| |||||||||||||  |||||||||    
T  19838691 gtttttttatcatgtgaaaatttgcacatgttaacccgtttaaaatagaaattttgtattggaacttgtacatttaatattaaata 19838776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 47326892 - 47326977
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||| |||||||||| || ||||||   |||| ||||| ||| ||||| | |||||  |||||||||    
T  47326892 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaata 47326977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 47341688 - 47341773
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||| |||||||||| || ||||||   |||| ||||| ||| ||||| | |||||  |||||||||    
T  47341688 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaata 47341773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 53961500 - 53961415
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||| |||| |||||| |||||||||| || ||||||   |||||||||| |||||| ||||   |||| |||||||||    
T  53961500 gtttttctatcgtgtgcaaatttgcacatgttaagaagtttaaattagtaattttgacttgaaatttgtgttttttatattaaata 53961415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 23438334 - 23438258
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacatttt 241  Q
    ||||||||||| ||||| |||||| |||||||| | || |||||||  |||| ||||  ||||||||||| ||||||    
T  23438334 ggtttttctattatgtgcaaatttgcacatgttgagaattttaaaatagtaactttgttttgaaacttgttcatttt 23438258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 32279249 - 32279205
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    |||||| |||||||||||||||| |||||||||| || |||||||    
T  32279249 gtttttttatcatgtgtaaatttgcacatgttaaaaagtttaaaa 32279205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 35999946 - 35999990
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    ||||||||||||||||| |||||| |||||||||| || ||||||    
T  35999946 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 35999990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 42479894 - 42479934
Alignment:
Q  168 ttttctatcatgtgtaaatttacacatgttaataaatttaa 208  Q
    |||||||||||||| |||||| |||||||||| ||||||||    
T  42479894 ttttctatcatgtgcaaatttgcacatgttaagaaatttaa 42479934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 24527 - 24612
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||||||||||| || ||||||||||  ||||||||| |||| || ||| |||||| ||||||||||    
T  24527 gtttttctatcatgtgcaaatttacacatgtaaagaaatttaaaatagtaattttgtattggaatttgaacatttagtattaaata 24612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 250
Target Start/End: Original strand, 8416 - 8498
Alignment:
Q  168 ttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaat 250  Q
    ||||||||||||||||||||| || ||||||| |||||||||   |||| ||||| ||  ||||||| |||||| ||||||||    
T  8416 ttttctatcatgtgtaaatttgcatatgttaagaaatttaaagtagtaactttgatttagaacttgtgcattttatattaaat 8498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 52778 - 52864
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || ||||||   |||| ||||| ||| |||||||   ||||||||||||||    
T  52778 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaata 52864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 145856 - 145770
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || ||||||   |||| ||||| ||| |||||||   ||||||||||||||    
T  145856 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaata 145770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 13267 - 13219
Alignment:
Q  162 aaaggtttttctatcatgtgtaaatttacacatgttaataaatttaaaa 210  Q
    |||||||||||||||||||| |||||| |||||||||| || |||||||    
T  13267 aaaggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaa 13219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 17788 - 17871
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaa 249  Q
    |||||||||| || || |||||| ||||||||| ||| || ||||  |||| |||  |||| ||||||||||||||||||||||    
T  17788 gtttttctataatttgcaaatttgcacatgttattaagttaaaaatagtaactttatattggaacttgtacattttgtattaaa 17871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 44293 - 44380
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaataa 252  Q
    ||||||||||||||||| |||||| ||||| |||| || |||||||    || |||| ||||||||||||| ||||| |||| |||||    
T  44293 ggtttttctatcatgtgcaaatttgcacatattaaaaagtttaaaataacaactttgcattgaaacttgtatattttttatttaataa 44380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 41160 - 41085
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacatttt 241  Q
    |||||||||||||||||||||||  | ||||||| || |||||||   |||||||| |||||||||| | ||||||    
T  41160 gtttttctatcatgtgtaaatttgtatatgttaagaagtttaaaataataattttgtattgaaacttatgcatttt 41085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 37113 - 37199
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    ||||||||||||||||| |||||| |||||||||| || ||||||    ||| ||||| ||| ||||||| |||||  |||||||||    
T  37113 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtgataactttgacttggaacttgtgcatttcatattaaata 37199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 45497 - 45582
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| ||||||||| |||| || || |||||||  ||||| ||| || | ||||||| |||||  |||||||||    
T  45497 gtttttctatcatgtgcaaatttacatatgtaaagaagtttaaaatagtaatattgtatcggaacttgtgcatttcatattaaata 45582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 94018 - 94103
Alignment:
Q  166 gtttttctatcatgtgtaaatttacacatgttaataaatttaaaaatgtaattttgaattgaaacttgtacattttgtattaaata 251  Q
    |||||||||||||||| |||||| || ||||||| || ||| |||   ||| |||  |||| ||||| ||||||||||||||||||    
T  94018 gtttttctatcatgtgcaaatttgcatatgttaagaagttttaaatactaactttacattggaacttatacattttgtattaaata 94103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 3412 - 3456
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    |||||||||||||||||||||||| ||||| |||| || ||||||    
T  3412 ggtttttctatcatgtgtaaatttgcacatattaagaagtttaaa 3456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 182221 - 182177
Alignment:
Q  165 ggtttttctatcatgtgtaaatttacacatgttaataaatttaaa 209  Q
    ||||||||||||||||||||||||  ||||||||| || ||||||    
T  182221 ggtttttctatcatgtgtaaatttgtacatgttaagaagtttaaa 182177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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