View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20226_low_44 (Length: 254)

Name: NF20226_low_44
Description: NF20226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20226_low_44
NF20226_low_44
[»] chr7 (47 HSPs)
chr7 (1-157)||(21811739-21811895)
chr7 (1-149)||(2058449-2058596)
chr7 (1-145)||(24265689-24265833)
chr7 (1-149)||(21640267-21640415)
chr7 (1-145)||(16880504-16880648)
chr7 (1-145)||(16885359-16885503)
chr7 (1-149)||(20357036-20357184)
chr7 (1-149)||(24260829-24260977)
chr7 (1-145)||(6592765-6592909)
chr7 (1-149)||(12406701-12406849)
chr7 (1-149)||(31109078-31109227)
chr7 (1-151)||(24789433-24789583)
chr7 (1-145)||(6594981-6595125)
chr7 (14-151)||(39730940-39731077)
chr7 (14-151)||(48408405-48408542)
chr7 (1-149)||(4873565-4873713)
chr7 (1-145)||(32060732-32060876)
chr7 (1-145)||(18392624-18392768)
chr7 (14-151)||(21646499-21646636)
chr7 (14-151)||(43504577-43504714)
chr7 (1-146)||(24023830-24023975)
chr7 (1-151)||(18409242-18409392)
chr7 (1-151)||(18414118-18414268)
chr7 (1-145)||(20343512-20343656)
chr7 (84-152)||(1532890-1532958)
chr7 (14-152)||(25767402-25767534)
chr7 (14-64)||(1532997-1533047)
chr7 (14-151)||(2479816-2479953)
chr7 (83-149)||(12397418-12397484)
chr7 (14-151)||(47264123-47264260)
chr7 (83-145)||(1562513-1562575)
chr7 (83-151)||(44847626-44847694)
chr7 (166-216)||(41381495-41381546)
chr7 (83-149)||(21983792-21983858)
chr7 (1-37)||(12397349-12397385)
chr7 (168-210)||(3909928-3909971)
chr7 (166-216)||(41913451-41913502)
chr7 (100-157)||(79955-80013)
chr7 (171-216)||(1691348-1691394)
chr7 (1-59)||(18389188-18389246)
chr7 (168-221)||(18990091-18990145)
chr7 (83-149)||(21989456-21989522)
chr7 (167-216)||(23331699-23331749)
chr7 (168-216)||(27956377-27956426)
chr7 (170-210)||(40941877-40941918)
chr7 (165-216)||(1343016-1343068)
chr7 (1-49)||(1562431-1562479)
[»] chr5 (55 HSPs)
chr5 (3-149)||(28807084-28807230)
chr5 (1-149)||(2785806-2785954)
chr5 (1-149)||(33768615-33768763)
chr5 (1-149)||(33791747-33791895)
chr5 (1-157)||(37560947-37561103)
chr5 (1-160)||(37556122-37556281)
chr5 (1-149)||(15045124-15045271)
chr5 (3-149)||(31396498-31396644)
chr5 (1-149)||(31401355-31401503)
chr5 (1-149)||(30631792-30631940)
chr5 (1-149)||(27450253-27450401)
chr5 (1-149)||(1456646-1456794)
chr5 (1-149)||(27445410-27445558)
chr5 (1-149)||(43599161-43599310)
chr5 (1-149)||(43604653-43604802)
chr5 (1-149)||(43610145-43610294)
chr5 (1-149)||(29402558-29402706)
chr5 (14-160)||(24136340-24136487)
chr5 (1-145)||(40379690-40379834)
chr5 (14-151)||(16407648-16407785)
chr5 (1-150)||(25077713-25077862)
chr5 (1-150)||(25135682-25135831)
chr5 (14-151)||(26177473-26177610)
chr5 (1-145)||(16546228-16546372)
chr5 (1-145)||(40381901-40382045)
chr5 (1-145)||(22536696-22536840)
chr5 (1-145)||(10592856-10592999)
chr5 (14-151)||(9789665-9789802)
chr5 (14-151)||(18442089-18442226)
chr5 (1-145)||(16544006-16544150)
chr5 (14-151)||(29719972-29720109)
chr5 (18-150)||(26170365-26170497)
chr5 (14-151)||(16409084-16409221)
chr5 (35-151)||(15465002-15465118)
chr5 (1-64)||(43592716-43592779)
chr5 (14-151)||(9352814-9352951)
chr5 (14-151)||(29722159-29722296)
chr5 (35-151)||(29752267-29752383)
chr5 (4-64)||(31180696-31180756)
chr5 (100-149)||(31180773-31180822)
chr5 (35-151)||(36931850-36931966)
chr5 (100-149)||(43592797-43592846)
chr5 (14-81)||(38219886-38219952)
chr5 (167-216)||(34302645-34302695)
chr5 (164-216)||(6532575-6532628)
chr5 (100-149)||(14520796-14520845)
chr5 (170-216)||(21605650-21605697)
chr5 (167-216)||(6114131-6114181)
chr5 (109-151)||(35388197-35388239)
chr5 (14-63)||(11916539-11916588)
chr5 (35-151)||(29751601-29751717)
chr5 (168-216)||(42917117-42917166)
chr5 (168-216)||(43237710-43237759)
chr5 (167-210)||(1662057-1662101)
chr5 (117-149)||(43625608-43625640)
[»] chr1 (42 HSPs)
chr1 (1-149)||(25439407-25439555)
chr1 (3-149)||(25444600-25444746)
chr1 (1-158)||(39445926-39446083)
chr1 (1-149)||(44023385-44023533)
chr1 (1-149)||(1054522-1054670)
chr1 (1-150)||(41391030-41391178)
chr1 (1-149)||(43987957-43988105)
chr1 (14-151)||(19360919-19361056)
chr1 (1-145)||(44203230-44203374)
chr1 (14-151)||(19365775-19365912)
chr1 (1-95)||(41398685-41398778)
chr1 (14-151)||(51764997-51765134)
chr1 (1-151)||(20622664-20622814)
chr1 (1-145)||(9036015-9036159)
chr1 (35-151)||(24202258-24202374)
chr1 (1-95)||(24793709-24793803)
chr1 (1-64)||(24786918-24786981)
chr1 (14-151)||(9986792-9986929)
chr1 (14-151)||(40281965-40282102)
chr1 (14-145)||(21053552-21053683)
chr1 (166-216)||(31931055-31931106)
chr1 (100-160)||(21536109-21536170)
chr1 (100-149)||(24793674-24793723)
chr1 (14-149)||(26644382-26644517)
chr1 (18-151)||(13604102-13604235)
chr1 (167-216)||(35305150-35305200)
chr1 (168-216)||(922199-922248)
chr1 (100-149)||(13598967-13599016)
chr1 (168-216)||(27295058-27295107)
chr1 (168-216)||(37498744-37498793)
chr1 (162-208)||(46771097-46771144)
chr1 (170-216)||(51984936-51984983)
chr1 (166-216)||(52303011-52303062)
chr1 (167-216)||(34256452-34256502)
chr1 (165-210)||(41073267-41073313)
chr1 (100-149)||(13659840-13659889)
chr1 (100-149)||(37070334-37070383)
chr1 (168-216)||(39190914-39190963)
chr1 (168-216)||(51369329-51369378)
chr1 (14-62)||(28220674-28220722)
chr1 (14-62)||(28223869-28223917)
chr1 (165-216)||(38262491-38262543)
[»] chr3 (75 HSPs)
chr3 (1-151)||(2672425-2672575)
chr3 (1-151)||(2676581-2676731)
chr3 (1-149)||(22172670-22172818)
chr3 (1-145)||(24968548-24968692)
chr3 (1-149)||(40372264-40372412)
chr3 (1-145)||(8512671-8512815)
chr3 (1-145)||(8517551-8517695)
chr3 (1-149)||(32475915-32476063)
chr3 (1-149)||(32480773-32480921)
chr3 (1-149)||(8477846-8477994)
chr3 (1-149)||(7167726-7167874)
chr3 (1-149)||(18656872-18657021)
chr3 (1-145)||(54634722-54634866)
chr3 (1-149)||(28501160-28501308)
chr3 (1-149)||(28503327-28503475)
chr3 (1-145)||(4598950-4599095)
chr3 (1-145)||(4601171-4601316)
chr3 (1-141)||(6716101-6716241)
chr3 (1-151)||(1306447-1306597)
chr3 (14-151)||(23198386-23198523)
chr3 (14-151)||(26928087-26928224)
chr3 (1-145)||(3617046-3617190)
chr3 (14-165)||(37726155-37726307)
chr3 (14-151)||(23200585-23200722)
chr3 (1-146)||(27352092-27352237)
chr3 (14-151)||(33386144-33386281)
chr3 (1-150)||(10055812-10055962)
chr3 (1-150)||(10058034-10058184)
chr3 (1-150)||(10060256-10060406)
chr3 (1-150)||(10062478-10062628)
chr3 (1-150)||(10064700-10064850)
chr3 (1-150)||(10066922-10067072)
chr3 (14-151)||(800692-800829)
chr3 (1-145)||(10208790-10208935)
chr3 (1-64)||(2671158-2671221)
chr3 (1-64)||(8738616-8738679)
chr3 (1-64)||(9090854-9090917)
chr3 (1-141)||(10210994-10211135)
chr3 (1-141)||(25637029-25637169)
chr3 (35-151)||(7782589-7782705)
chr3 (1-61)||(6718365-6718425)
chr3 (14-151)||(27453437-27453574)
chr3 (14-95)||(32143803-32143884)
chr3 (14-151)||(37408043-37408179)
chr3 (98-151)||(27974440-27974493)
chr3 (98-151)||(32143868-32143921)
chr3 (166-216)||(29786954-29787005)
chr3 (99-157)||(36029658-36029717)
chr3 (166-216)||(42067577-42067628)
chr3 (100-149)||(8738550-8738599)
chr3 (100-149)||(9090788-9090837)
chr3 (100-149)||(21711768-21711817)
chr3 (100-149)||(30709267-30709316)
chr3 (165-216)||(27079736-27079788)
chr3 (165-216)||(27082703-27082755)
chr3 (1-61)||(45282662-45282722)
chr3 (166-216)||(11140245-11140296)
chr3 (14-145)||(27027187-27027318)
chr3 (166-216)||(31308875-31308926)
chr3 (100-157)||(16264896-16264954)
chr3 (165-210)||(27647475-27647521)
chr3 (171-216)||(29347617-29347663)
chr3 (166-215)||(35171551-35171601)
chr3 (165-210)||(39630254-39630300)
chr3 (100-145)||(6718300-6718345)
chr3 (14-63)||(8370046-8370095)
chr3 (14-63)||(16264829-16264878)
chr3 (100-149)||(16498645-16498694)
chr3 (100-149)||(39032026-39032075)
chr3 (100-145)||(40734087-40734132)
chr3 (14-63)||(40734168-40734217)
chr3 (14-63)||(40735099-40735148)
chr3 (168-216)||(42364284-42364333)
chr3 (100-145)||(45282597-45282642)
chr3 (109-149)||(1730917-1730957)
[»] chr6 (46 HSPs)
chr6 (1-149)||(16839174-16839322)
chr6 (1-149)||(33329941-33330089)
chr6 (1-149)||(33335438-33335586)
chr6 (1-149)||(6005850-6005998)
chr6 (1-159)||(6438927-6439085)
chr6 (1-95)||(28155133-28155227)
chr6 (1-149)||(30125026-30125174)
chr6 (1-149)||(11857411-11857559)
chr6 (1-149)||(14741934-14742082)
chr6 (1-149)||(22010197-22010345)
chr6 (1-149)||(5343908-5344056)
chr6 (1-145)||(6136391-6136535)
chr6 (1-145)||(16578945-16579089)
chr6 (1-145)||(16616291-16616435)
chr6 (14-151)||(2171960-2172097)
chr6 (14-151)||(22709501-22709638)
chr6 (1-150)||(27647475-27647624)
chr6 (1-149)||(5674238-5674386)
chr6 (1-145)||(25420809-25420953)
chr6 (1-145)||(33342531-33342676)
chr6 (1-145)||(16554466-16554610)
chr6 (1-145)||(16631022-16631166)
chr6 (1-95)||(5266516-5266610)
chr6 (1-150)||(34166673-34166823)
chr6 (1-150)||(13150856-13151006)
chr6 (1-150)||(34164451-34164601)
chr6 (1-64)||(14737159-14737222)
chr6 (14-151)||(411692-411829)
chr6 (14-151)||(3073199-3073336)
chr6 (35-151)||(6097863-6097979)
chr6 (100-149)||(14737093-14737142)
chr6 (1-49)||(6026942-6026990)
chr6 (14-151)||(23896813-23896950)
chr6 (35-151)||(26253596-26253712)
chr6 (170-216)||(17545607-17545654)
chr6 (117-160)||(28155087-28155130)
chr6 (166-216)||(32834131-32834182)
chr6 (166-215)||(26358911-26358961)
chr6 (68-150)||(34151835-34151917)
chr6 (170-210)||(2258905-2258946)
chr6 (100-149)||(5016977-5017026)
chr6 (14-63)||(5757046-5757095)
chr6 (168-216)||(10888167-10888216)
chr6 (100-149)||(31085954-31086003)
chr6 (117-149)||(5266613-5266645)
chr6 (167-210)||(24212911-24212955)
[»] chr8 (39 HSPs)
chr8 (1-149)||(35745822-35745970)
chr8 (3-149)||(39784333-39784479)
chr8 (1-149)||(4759542-4759690)
chr8 (1-149)||(10683747-10683895)
chr8 (1-149)||(18870029-18870177)
chr8 (1-149)||(30656126-30656274)
chr8 (1-149)||(33037295-33037443)
chr8 (1-149)||(36979858-36980006)
chr8 (1-149)||(6311779-6311927)
chr8 (1-149)||(18852635-18852783)
chr8 (14-152)||(1261420-1261558)
chr8 (1-145)||(3439100-3439243)
chr8 (1-149)||(25327672-25327820)
chr8 (14-151)||(2627325-2627462)
chr8 (17-145)||(26288376-26288504)
chr8 (17-145)||(26301633-26301761)
chr8 (17-145)||(26313627-26313755)
chr8 (1-145)||(7289439-7289584)
chr8 (14-151)||(7412808-7412945)
chr8 (1-145)||(42575752-42575897)
chr8 (1-145)||(15290155-15290300)
chr8 (1-145)||(15470524-15470669)
chr8 (1-64)||(10688692-10688755)
chr8 (1-95)||(25689604-25689697)
chr8 (35-151)||(31042915-31043031)
chr8 (100-149)||(10688626-10688675)
chr8 (166-216)||(29773443-29773494)
chr8 (99-157)||(19175225-19175283)
chr8 (100-149)||(5701960-5702009)
chr8 (100-145)||(25689573-25689618)
chr8 (100-159)||(4456575-4456635)
chr8 (166-216)||(14498660-14498711)
chr8 (166-216)||(15726247-15726298)
chr8 (170-216)||(44934901-44934948)
chr8 (167-216)||(23286564-23286614)
chr8 (167-216)||(29229534-29229584)
chr8 (167-216)||(37511087-37511137)
chr8 (165-216)||(945973-946025)
chr8 (164-215)||(17096639-17096691)
[»] chr4 (45 HSPs)
chr4 (1-149)||(45347325-45347473)
chr4 (1-149)||(18856153-18856301)
chr4 (1-149)||(24742421-24742569)
chr4 (1-149)||(9223907-9224055)
chr4 (1-94)||(45356861-45356954)
chr4 (1-150)||(7122274-7122423)
chr4 (1-150)||(7124496-7124645)
chr4 (1-149)||(56141519-56141668)
chr4 (1-149)||(5733090-5733239)
chr4 (1-149)||(9228694-9228842)
chr4 (39-160)||(18860403-18860524)
chr4 (1-149)||(51520894-51521042)
chr4 (1-145)||(8392994-8393138)
chr4 (14-151)||(13992735-13992872)
chr4 (14-151)||(28467984-28468121)
chr4 (1-149)||(3814450-3814597)
chr4 (1-145)||(8395203-8395347)
chr4 (14-151)||(31495758-31495895)
chr4 (1-115)||(18712297-18712411)
chr4 (1-95)||(29761102-29761196)
chr4 (1-145)||(5135661-5135806)
chr4 (1-145)||(5137887-5138032)
chr4 (35-151)||(31985134-31985250)
chr4 (97-149)||(5143806-5143858)
chr4 (14-149)||(5148158-5148293)
chr4 (98-149)||(8689045-8689096)
chr4 (100-158)||(38151909-38151968)
chr4 (100-157)||(16628345-16628403)
chr4 (101-157)||(3778116-3778173)
chr4 (168-216)||(41760018-41760067)
chr4 (168-216)||(51436171-51436220)
chr4 (166-216)||(14802710-14802761)
chr4 (170-216)||(38835854-38835901)
chr4 (99-149)||(5268700-5268750)
chr4 (100-157)||(16622766-16622824)
chr4 (167-216)||(34280586-34280636)
chr4 (167-216)||(47302028-47302078)
chr4 (168-216)||(3716325-3716374)
chr4 (14-63)||(3778029-3778078)
chr4 (100-149)||(6742897-6742946)
chr4 (100-149)||(10047932-10047981)
chr4 (168-216)||(27538915-27538964)
chr4 (168-216)||(28037685-28037734)
chr4 (166-210)||(52809307-52809352)
chr4 (14-62)||(16628440-16628488)
[»] scaffold0464 (1 HSPs)
scaffold0464 (1-159)||(789-947)
[»] chr2 (37 HSPs)
chr2 (1-149)||(19344853-19345001)
chr2 (3-149)||(19349713-19349859)
chr2 (1-149)||(14291969-14292117)
chr2 (1-149)||(9295870-9296018)
chr2 (35-149)||(32247230-32247344)
chr2 (1-149)||(39811485-39811633)
chr2 (1-149)||(11098395-11098543)
chr2 (1-145)||(12647811-12647955)
chr2 (1-151)||(3492220-3492370)
chr2 (14-151)||(30832928-30833065)
chr2 (14-150)||(25410122-25410258)
chr2 (14-151)||(32289155-32289292)
chr2 (14-145)||(4484779-4484910)
chr2 (17-151)||(40739316-40739450)
chr2 (14-151)||(6266281-6266418)
chr2 (83-149)||(44310479-44310545)
chr2 (166-216)||(4673959-4674010)
chr2 (100-149)||(8389632-8389681)
chr2 (98-151)||(28258676-28258729)
chr2 (169-216)||(42046076-42046124)
chr2 (170-216)||(6884161-6884208)
chr2 (166-216)||(11813554-11813605)
chr2 (98-149)||(36757426-36757477)
chr2 (167-216)||(58919-58969)
chr2 (100-157)||(10706725-10706783)
chr2 (167-216)||(38963421-38963471)
chr2 (168-216)||(5091997-5092046)
chr2 (168-216)||(11227627-11227676)
chr2 (100-149)||(21630511-21630560)
chr2 (14-63)||(28258745-28258794)
chr2 (100-149)||(33528106-33528155)
chr2 (14-63)||(33528191-33528240)
chr2 (100-149)||(39483443-39483492)
chr2 (165-216)||(1353504-1353556)
chr2 (170-217)||(5389557-5389605)
chr2 (109-149)||(20522797-20522837)
chr2 (165-216)||(34665568-34665620)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1-145)||(1751-1895)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-145)||(148456-148600)
[»] scaffold0197 (2 HSPs)
scaffold0197 (1-149)||(18672-18820)
scaffold0197 (1-145)||(13796-13940)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-145)||(176462-176606)
[»] scaffold0565 (1 HSPs)
scaffold0565 (1-145)||(3029-3173)
[»] scaffold0674 (1 HSPs)
scaffold0674 (1-145)||(4154-4298)
[»] scaffold0188 (1 HSPs)
scaffold0188 (18-151)||(17438-17571)
[»] scaffold0355 (1 HSPs)
scaffold0355 (1-149)||(3345-3493)
[»] scaffold0491 (2 HSPs)
scaffold0491 (14-151)||(9165-9301)
scaffold0491 (14-151)||(11610-11746)
[»] scaffold0286 (1 HSPs)
scaffold0286 (14-151)||(21946-22083)
[»] scaffold0137 (1 HSPs)
scaffold0137 (1-145)||(5871-6016)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-149)||(34562-34710)
[»] scaffold1455 (1 HSPs)
scaffold1455 (83-149)||(1717-1783)
[»] scaffold0140 (1 HSPs)
scaffold0140 (35-151)||(7918-8034)
[»] scaffold1519 (1 HSPs)
scaffold1519 (14-121)||(519-626)
[»] scaffold0665 (2 HSPs)
scaffold0665 (1-64)||(8136-8199)
scaffold0665 (100-149)||(8216-8265)
[»] scaffold0510 (1 HSPs)
scaffold0510 (14-151)||(1090-1227)
[»] scaffold0087 (1 HSPs)
scaffold0087 (18-151)||(43441-43574)
[»] scaffold0006 (4 HSPs)
scaffold0006 (18-151)||(132759-132892)
scaffold0006 (100-149)||(6252-6301)
scaffold0006 (100-149)||(3060-3109)
scaffold0006 (100-149)||(149601-149650)
[»] scaffold0098 (2 HSPs)
scaffold0098 (98-151)||(45744-45797)
scaffold0098 (14-62)||(45679-45727)
[»] scaffold0005 (1 HSPs)
scaffold0005 (166-216)||(36966-37017)
[»] scaffold0625 (1 HSPs)
scaffold0625 (168-221)||(6615-6669)


Alignment Details
Target: chr7 (Bit Score: 141; Significance: 5e-74; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 21811895 - 21811739
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||    
T  21811895 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacattgctcacggcatctcagatcgtgtcacgatggcaa 21811796  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaatacaaca 157  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21811795 aatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaatacaaca 21811739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 2058449 - 2058596
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  |||||||||| | ||||||||| |||| |||||||||||||  |||    
T  2058449 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactag-ctcacggcacctcaaatcgtgtcacgatgccaa 2058547  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  2058548 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 2058596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 24265833 - 24265689
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||  || |||||||| |||||| || || | |||||||||||||  ||||    
T  24265833 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctccctgatcgtgtcacgactgcaa 24265734  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||||||||||||||||||||  ||| ||||| |||||||||    
T  24265733 aatcgtgacacgattcctctgttctcccaaaccactaatttgaag 24265689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 21640267 - 21640415
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||| ||  |||||||||| | ||||||||| ||| | |||||||||||||  ||    
T  21640267 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactag-ctcacggcacctcgaaatcgtgtcacgatgcca 21640365  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  21640366 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 21640415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 16880504 - 16880648
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||| |||||||||||||||| |||||||||||  || ||||||| ||||||| || || | |||||||||||||| ||||    
T  16880504 agcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctcactgcctccctgatcgtgtcacgatggcaa 16880603  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||||||||||||||||| || |||| ||||| |||||||||    
T  16880604 aatcgtgacacgattcctctgctcttccaaaccactaatttgaag 16880648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 16885359 - 16885503
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||| |||||||||||||||| |||||||||||  || ||||||| ||||||| || || | |||||||||||||| ||||    
T  16885359 agcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctcactgcctccctgatcgtgtcacgatggcaa 16885458  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||||||||||||||||| || |||| ||||| |||||||||    
T  16885459 aatcgtgacacgattcctctgctcttccaaaccactaatttgaag 16885503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 20357184 - 20357036
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||| ||  |||||||||| | ||||||||| ||  | |||||||||||||  ||    
T  20357184 agcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactag-ctcacggcaccttgaaatcgtgtcacgatgcca 20357086  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  20357085 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 20357036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 24260977 - 24260829
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||   | |   ||||||||||| || || | |||||||||||||| || |    
T  24260977 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagattacttggctcactgcctccctgatcgtgtcacgatggcca 24260878  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  24260877 aatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaa 24260829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 6592765 - 6592909
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgca 99  Q
    |||||||||||||||||||||||||||| || | ||||||||||||||| |||||| ||||| | | ||||||||||||  | |||||||||||||| ||    
T  6592765 agcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatccca 6592863  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||| ||||||| | |||||| ||||||||||||||||||||    
T  6592864 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 6592909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 12406701 - 12406849
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  | |||||||| | ||||||||  ||  | |||||||||||||  ||    
T  12406701 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcttgcaaactag-ctcacggccacttgaaatcgtgtcacgatgcca 12406799  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  12406800 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 12406849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 31109227 - 31109078
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcac-ggcatctcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||||| ||| || ||||  | | |||||| ||||||  ||    
T  31109227 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttagcttacaggcacttgaaatcgtgccacgatgcca 31109128  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| |||| |||||||||||||||||||    
T  31109127 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 31109078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 24789583 - 24789433
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    ||||||||||   |||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||| | | | |||||||||||||  ||    
T  24789583 agcaagtttcacaatcgtgtcacgatttcccaagatcgtgccacgatttggcaccctgcaaac-tagctcacggcaccacgaaatcgtgtcacgatgcca 24789485  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    || ||||| ||||||| | |||||| |||||||||||||||||||| |||||    
T  24789484 aattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 24789433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 6594981 - 6595125
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgca 99  Q
    |||||||||||||||||||||||||||| || | ||||||||||||||| |||||| ||||| | | ||||||||||||  | |||||||||||||| ||    
T  6594981 agcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatccca 6595079  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||| ||||||| | |||||  ||||||||||||||||||||    
T  6595080 aaatcgtgtcacgatttccctgtttttccagaccacaaatttgaag 6595125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 39731077 - 39730940
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||| | |||||||||| |||||||| |||||||||||||  | ||||||||||| || | ||||||||||||  |||| ||||| ||||    
T  39731077 atcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccag-ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacg 39730979  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| ||||||||||||||||||||||||||    
T  39730978 atttctctgttcttccagaccacaaatttgaagccaaat 39730940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 48408542 - 48408405
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||| |||||||||| |||||||| |||||||||||||  | ||||||||||| || | ||||||||||||  |||| ||||| ||||    
T  48408542 atcgtgtcacgatttctcaagatcgtgtcacgatttggcaccctgcaaaccag-ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacg 48408444  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| | ||||||||||||||||||||||||    
T  48408443 atttctctgttctttcagaccacaaatttgaagccaaat 48408405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 4873565 - 4873713
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||| ||  ||||||||||   || |||||  ||  | |||||||||||||  ||    
T  4873565 agcaagtttctgaattgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactat-cttacggccacttgaaatcgtgtcacgatgcca 4873663  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  4873664 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 4873713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 32060732 - 32060876
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgca 99  Q
    ||||||||||| |||||||||||||||| || | ||||||||||||||| |||||| ||||| | | ||||||||||||  | |||||||||||||  ||    
T  32060732 agcaagtttcttgatcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatacca 32060830  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||| ||||||| | |||||| ||||||||||||||||||||    
T  32060831 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 32060876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 18392624 - 18392768
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    ||||||||||  |||||||||||||||| || | |||||| ||||| |||||||||||||| | | |||||||||| |||  |||||||||||||  |||    
T  18392624 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggcacctccaatcgtgtcacgattccaa 18392723  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||| ||||||| | |||||| |||| |||||||||||||||    
T  18392724 aatcgtggcacgatttccctgttcttccaaaccacaaatttgaag 18392768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 21646499 - 21646636
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    ||||||||||||||| ||||||||||| |||||||| |||||||||||||   |||||||||||| | | |||||||||||||  |||| | ||| ||||    
T  21646499 atcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacgaaatcgtgtcacgatgccaaatttgtgtcacg 21646597  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| |||| |||||||||||||||||||||    
T  21646598 atttctctgttcttccaaaccacaaatttgaagccaaat 21646636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 43504577 - 43504714
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    ||||||||||||||||||| ||||||| |||||||| |||||||||||||   |||||||||||| | | |||||||||||||  |||| ||||| ||||    
T  43504577 atcgtgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacg 43504675  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| | |||||| ||||||||||||||||||||| ||||    
T  43504676 atttccctgttcttccagaccacaaatttgaagctaaat 43504714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 24023975 - 24023830
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcac-ggcatctcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| | |||| | | ||  | | |||||| ||||||  ||    
T  24023975 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgccacgatgcca 24023877  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagc 146  Q
     ||||||| ||||||| |||||||| |||||||||||||||||||||    
T  24023876 caatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 24023830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 18409242 - 18409392
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||  | |||||||||||||||| |||||||||| || ||||| |||||||||||||   |||||||||| | | | |||||||||||||  ||    
T  18409242 agcaagtttgagaatcgtgtcacgatttctcaagatcgtgtcatgatttggcaccctgcaaac-cagctcacggcaccacaaaatcgtgtcacgatgcca 18409340  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    || |||||  |||||| |||||||| |||||| |||||||||||||||||||    
T  18409341 aattcgtgttacgatttctctgttcttccagaacacaaatttgaagccaaat 18409392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 18414118 - 18414268
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||  | ||||||| ||||||||||||||||||| |||||||| || ||||||||||   |||||||||| | | | |||||| ||||||  ||    
T  18414118 agcaagtttgagaatcgtgttacgatttcccaagatcgtgtcacgatttggcgccctgcaaac-cagctcacggcaccacaaaatcgtgccacgatgcca 18414216  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    || ||||| ||||||| |||||||| ||||||||| ||||||||||||||||    
T  18414217 aattcgtgtcacgatttctctgttcttccagaccataaatttgaagccaaat 18414268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 20343656 - 20343512
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    ||||||||||  ||||||||||||||||||||  |||||| |||||||||||| || || ||| | |||||||||| | | | |||||||||||||  ||    
T  20343656 agcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcatccggc-aacctagctcacggcaccccgaaatcgtgtcacgatgcca 20343558  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
     ||||| | ||||||| | |||||| ||||||||||||||||||||    
T  20343557 caatcgcgtcacgatttccctgttcttccagaccacaaatttgaag 20343512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 1532958 - 1532890
Alignment:
Q  84 tcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaata 152  Q
    ||||||||||||  |||| ||||| ||||||| |||||||| |||||||||||||||||||||||||||    
T  1532958 tcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaata 1532890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 25767402 - 25767534
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||||||| |||||| |||||||| |||||||||||||   |||||||||||| | | |||||||||||||  |||| | ||| ||||    
T  25767402 atcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacgaaatcgtgtcacgatgccaaatttgtgtcacg 25767500  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaata 152  Q
    ||| ||       |||||||||||||||||||||||||||    
T  25767501 atttct------ttccagaccacaaatttgaagccaaata 25767534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 1533047 - 1532997
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaact 64  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  1533047 atcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaact 1532997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 2479816 - 2479953
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    ||||||| |||||||| ||| |||||| ||||||||  ||||||||||||  | ||||||||||   | | ||||||||||||  |||||||||| |||     
T  2479816 atcgtgtaacgatttcacaaaatcgtgacacgatttgacaccctgcaaaccag-ctcacggcattagaaaatcgtgtcacgatgccaaaatcgtgtcaca 2479914  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| | || |||||||||||||||||||||    
T  2479915 atttctctgttcttacaaaccacaaatttgaagccaaat 2479953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 12397418 - 12397484
Alignment:
Q  83 atcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||||||||  |||||||||| | ||||| |||||||| ||||||||||||||||||||||||    
T  12397418 atcgtgtcacgataccaaaatcgtgtcgcgatttctctgttcttccagaccacaaatttgaagccaa 12397484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 47264123 - 47264260
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||| ||  || ||||||||||||  |||||| |||||  | |||||| |||  || | ||||||||||||  |||||||||| ||||    
T  47264123 atcgtgtcacgatttcacacaattgtgccacgatttgacaccctacaaaccag-ctcacgacattacaaaatcgtgtcacgatgccaaaatcgtgtcacg 47264221  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||| ||| |||| |||||||||||||||||||||    
T  47264222 atttctctattcttccaaaccacaaatttgaagccaaat 47264260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 1562513 - 1562575
Alignment:
Q  83 atcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||||||||  |||||||||| ||||||| | |||||| ||||||||||||||||||||    
T  1562513 atcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 1562575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 44847694 - 44847626
Alignment:
Q  83 atcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    |||||||||||||  |||||||||| ||||||| |||||||| |  | |||||||||||||||||||||    
T  44847694 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttttaaaccacaaatttgaagccaaat 44847626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 41381495 - 41381546
Alignment:
Q  166 taggcaaattctatggtacaccaa-caattggagtgtattggtacatcaaat 216  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  41381495 taggcaaattatatggtacaccaaacaatttgagtgtattggtacatcaaat 41381546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 21983792 - 21983858
Alignment:
Q  83 atcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||||||||    |||||||| ||||||| |||||||| |||| |||||||||||||||||||    
T  21983792 atcgtgtcacgatgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 21983858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 12397349 - 12397385
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatc 37  Q
    |||||||||||| ||||||||||||||||||||||||    
T  12397349 agcaagtttctgaatcgtgtcacgatttcccaagatc 12397385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 3909928 - 3909971
Alignment:
Q  168 ggcaaattctatggtacacc-aacaattggagtgtattggtaca 210  Q
    |||||||||||||||||||| ||||||| |||||||||||||||    
T  3909928 ggcaaattctatggtacacccaacaatttgagtgtattggtaca 3909971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 41913502 - 41913451
Alignment:
Q  166 taggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    |||||||||| ||||||||| ||||||||| ||||||||||||||| |||||    
T  41913502 taggcaaattatatggtacatccaacaatttgagtgtattggtacaccaaat 41913451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 79955 - 80013
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa-atacaaca 157  Q
    |||||||| ||||||| |||||||| |||| | ||||||||||||||||| ||||||||    
T  79955 aaatcgtgtcacgatttctctgttcttccaaatcacaaatttgaagccaatatacaaca 80013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 1691394 - 1691348
Alignment:
Q  171 aaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||||    
T  1691394 aaattctatggtacatccaaccatttgagtgtattggtacatcaaat 1691348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18389188 - 18389246
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgc 59  Q
    ||||||||||  |||||||||||||||| || | |||||| ||||| ||||||||||||    
T  18389188 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgc 18389246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 18990091 - 18990145
Alignment:
Q  168 ggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaataaata 221  Q
    |||||||||||||||||||| || |||| ||||||||||||||| ||||| ||||    
T  18990091 ggcaaattctatggtacaccaaaaaatttgagtgtattggtacaccaaatcaata 18990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 21989456 - 21989522
Alignment:
Q  83 atcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||||||||    ||||| || ||||||| |||||||| |||| |||||||||||||||||||    
T  21989456 atcgtgtcacgatgatgaaatcttgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 21989522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 23331699 - 23331749
Alignment:
Q  167 aggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    ||||||||||||||||||||  ||||||| ||||||||||||||| |||||    
T  23331699 aggcaaattctatggtacacttaacaatttgagtgtattggtacaccaaat 23331749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 27956377 - 27956426
Alignment:
Q  168 ggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||||| ||||||| |||| |||||||||| |||||    
T  27956377 ggcaaattctatggtacacctaacaatttgagtatattggtacaccaaat 27956426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 40941877 - 40941918
Alignment:
Q  170 caaattctatggtacac-caacaattggagtgtattggtaca 210  Q
    ||||||||||||||||| |||||||| |||||||||||||||    
T  40941877 caaattctatggtacactcaacaatttgagtgtattggtaca 40941918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 1343016 - 1343068
Alignment:
Q  165 ataggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    ||||||||||||||||||||| ||||||||| |||||||  |||||| |||||    
T  1343016 ataggcaaattctatggtacacccaacaatttgagtgtaccggtacaccaaat 1343068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1562431 - 1562479
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattt 49  Q
    ||||||||||  |||||||||||||||| |||| |||||| ||||||||    
T  1562431 agcaagtttcacgatcgtgtcacgatttaccaaaatcgtgacacgattt 1562479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 28807230 - 28807084
Alignment:
Q  3 caagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaaaa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28807230 caagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgattgcaaaa 28807131  T
Q  103 tcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  28807130 tcgtgacacgattcctctgttcttccagaccataaatttgaagccaa 28807084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 2785806 - 2785954
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||||| || |    
T  2785806 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgcca 2785905  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||||||    
T  2785906 aatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 2785954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 33768615 - 33768763
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||||| || |    
T  33768615 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgcca 33768714  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||||||    
T  33768715 aatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 33768763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 33791747 - 33791895
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||||| || |    
T  33791747 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgcca 33791846  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||||||    
T  33791847 aatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 33791895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 37561103 - 37560947
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  | || |  ||||||||||||||||||||||||||||||||||||    |    
T  37561103 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacggcatctcagatcgtgtcacgattatca 37561004  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaatacaaca 157  Q
    ||||||| ||||||| |||||||| |||||||||||||||||||||||||| |||||    
T  37561003 aatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaattcaaca 37560947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 37556281 - 37556122
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||  | || |  ||||||||||||||||||||||||||||||||||||  | |    
T  37556281 agcaagtttctagatcgtgtcacaatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacggcatctcagatcgtgtcacgattacca 37556182  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaatacaacaaaa 160  Q
    ||||||| ||||||| |||||||| |||||||||||||||||||||||||| ||||||||    
T  37556181 aatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaattcaacaaaa 37556122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 15045124 - 15045271
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  |||||||||| |||||||||||||||| |||||||||||||  |||    
T  15045124 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact-ggctcacggcatctcaaatcgtgtcacgattccaa 15045222  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||||| ||||||| |||||||| |||| || ||||||||||||||||    
T  15045223 aatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaa 15045271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 31396644 - 31396498
Alignment:
Q  3 caagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaaaa 102  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||||||  || |||||||| |||||| || |||| |||||||||||||| || |||    
T  31396644 caagtgtctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaa 31396545  T
Q  103 tcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||||    
T  31396544 tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaa 31396498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 31401503 - 31401355
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| ||| ||||||||||||||||||||||| |||||||||||  || |||||||| |||||| || |||| |||||||||||||| || |    
T  31401503 agcaagtttctgaatcatgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgcca 31401404  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||||||||||||||| |||  ||| |||||||||||||||||||    
T  31401403 aatcgtgacacgattcctctattctcccaaaccacaaatttgaagccaa 31401355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 30631792 - 30631940
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||| |||||| |||||||| ||  |||||||||| ||||||||||| ||| | |||||||||||||  ||    
T  30631792 agcaagtttctgaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcgtcctgcaaact-ggctcacggcacctcgaaatcgtgtcacgatgcca 30631890  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  30631891 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 30631940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 27450253 - 27450401
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatc-tcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| | |||||||||  | | | |||||||||||||  ||    
T  27450253 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggccccttgaaatcgtgtcacgatgcca 27450351  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  27450352 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 27450401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 1456794 - 1456646
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  |||| ||||| | ||||||||  ||  | |||||||||||||  ||    
T  1456794 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgtaaactag-ctcacggccccttgaaatcgtgtcacgatgcca 1456696  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  1456695 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 1456646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 27445410 - 27445558
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatc-tcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| | |||||||||  | | | |||||||||||||  ||    
T  27445410 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggccccttgaaatcgtgtcacgatgcca 27445508  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| || |||||||||||||||||||||    
T  27445509 aaatcgtgtcacgatttctctgttcttctagaccacaaatttgaagccaa 27445558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 43599161 - 43599310
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatc--tcagatcgtgtcacgatcgc 98  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| | |||||||||  |  | | ||||||||||||   |    
T  43599161 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcccccttgaaatcgtgtcacgacgcc 43599259  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  43599260 aaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 43599310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 43604653 - 43604802
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatc--tcagatcgtgtcacgatcgc 98  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| | |||||||||  |  | | ||||||||||||   |    
T  43604653 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcccccttgaaatcgtgtcacgacgcc 43604751  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  43604752 aaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 43604802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 43610145 - 43610294
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatc--tcagatcgtgtcacgatcgc 98  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| | |||||||||  |  | | ||||||||||||   |    
T  43610145 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcccccttgaaatcgtgtcacgacgcc 43610243  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  43610244 aaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 43610294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 29402706 - 29402558
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacgg-catctcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| | ||||| || ||  | | |||||| ||||||  ||    
T  29402706 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcatggccacttgaaatcgtgccacgatgcca 29402608  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  29402607 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 29402558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 24136340 - 24136487
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||| | |||||||||||| | | || ||||||||||  |||| ||||| ||||    
T  24136340 atcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-tagctcacggcatcacgaaattgtgtcacgatgccaaattcgtgtcacg 24136438  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaata-caacaaaa 160  Q
    ||| || ||||| ||||||||||||||||||| ||||||| ||||||||    
T  24136439 atttctgtgttcttccagaccacaaatttgaaaccaaatatcaacaaaa 24136487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 40379834 - 40379690
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    ||||||||||  |||||||||||||||| || | |||||| ||||| |||||||||||||| | | |||||||||| |||  |||||||||||||  |||    
T  40379834 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggcacctccaatcgtgtcacgattccaa 40379735  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||| ||||||| | |||||| ||||||||||||||||||||    
T  40379734 aatcgtggcacgatttccctgttcttccagaccacaaatttgaag 40379690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 16407785 - 16407648
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||| | |||||||||| |||||||| |||||||||||||  | ||||||||||| || | ||||||||||||  |||| ||||| ||||    
T  16407785 atcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccag-ctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacg 16407687  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| ||||||||||||||||||||||||||    
T  16407686 atttctctgttcttccagaccacaaatttgaagccaaat 16407648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 25077862 - 25077713
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgca 99  Q
    ||||||||||||||||||||||||||||||||  |||||| |||||||| |||||| | ||| | | |||||||||| |||  |||| ||||||||| ||    
T  25077862 agcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgattt-gcacccctacaaccctagctcacggcacctccaatcgcgtcacgatccca 25077764  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaa 150  Q
    |||||||| ||||||| | |||||| |||||||||||||||||||| ||||    
T  25077763 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 25077713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 25135831 - 25135682
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgca 99  Q
    ||||||||||||||||||||||||||||||||  |||||| |||||||| |||||| | ||| | | |||||||||| |||  |||| ||||||||| ||    
T  25135831 agcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgattt-gcacccctacaaccctagctcacggcacctccaatcgcgtcacgatccca 25135733  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaa 150  Q
    |||||||| ||||||| | |||||| |||||||||||||||||||| ||||    
T  25135732 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 25135682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 26177610 - 26177473
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    ||||||||||||||||||| ||||||| |||||||| |||||||||||||  | ||||||||||| | | |||||||||||||  |||| ||||| ||||    
T  26177610 atcgtgtcacgatttcccatgatcgtgtcacgatttggcaccctgcaaaccag-ctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacg 26177512  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| | |||||| ||||||||||||||||||||||||||    
T  26177511 atttccctgttcttccagaccacaaatttgaagccaaat 26177473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 16546372 - 16546228
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    ||||||||||  |||||||||||||||| || | |||||| ||||| |||||||||||||| | | |||||||||| |||  |||||||||||||  |||    
T  16546372 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggcacctccaatcgtgtcacgattccaa 16546273  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||| ||||||| | |||||| |||| |||||||||||||||    
T  16546272 aatcgtggcacgatttccctgttcttccaaaccacaaatttgaag 16546228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 40382045 - 40381901
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    ||||||||||  |||||||||||||||| || | |||||| ||||| |||||||||||||| | | |||||||||| |||  |||||||||||||  |||    
T  40382045 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggcacctccaatcgtgtcacgattccaa 40381946  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||| ||||||| | |||||| | ||||||||||||||||||    
T  40381945 aatcgtggcacgatttccctgttctttcagaccacaaatttgaag 40381901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 22536696 - 22536840
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    ||||||||||  ||||||||||||||||||||  || |||||||||||||||||||||| ||| | |||||||||| | | | |||||||||||||  ||    
T  22536696 agcaagtttcacgatcgtgtcacgatttcccacaattgtgccacgattttgcaccctgc-aacctagctcacggcaccccgaaatcgtgtcacgatgcca 22536794  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
     ||||||| ||||||| | |||||| ||||||||||||||||||||    
T  22536795 caatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 22536840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 10592999 - 10592856
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    ||||||||||  |||||||||||||||| || | ||||||||||||||||||||||||| ||| |  ||||||||| |    |||||||||||||  |||    
T  10592999 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgc-aacctatctcacggcacccggaatcgtgtcacgataccaa 10592901  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||| ||||||| | |||||| ||||||||||||||||||||    
T  10592900 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 10592856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 9789665 - 9789802
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||||||  |||||| |||||||| |||||||||||||  | ||||||||||| | | |||||||||||||  |||| ||||| ||||    
T  9789665 atcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccag-ctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacg 9789763  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| | |||||| |||||||||||||||||||| |||||    
T  9789764 atttccctgttcttccagaccacaaatttgaagacaaat 9789802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 18442089 - 18442226
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatc-tcagatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||||||  |||||| |||||||| |||||||||||||  | ||||||||||| | | |||||||||||||  |||| ||||| ||||    
T  18442089 atcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccag-ctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacg 18442187  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| | |||||| |||||||||||||||||||| |||||    
T  18442188 atttccctgttcttccagaccacaaatttgaagacaaat 18442226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 16544150 - 16544006
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    ||||||||||  |||||||||||||||| || | |||||| ||||| ||||||||||| || | | |||||| ||| |||  |||||||||||||  |||    
T  16544150 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgtaaccctagctcacagcacctccaatcgtgtcacgattccaa 16544051  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||| ||||||| | |||||| |||| |||||||||||||||    
T  16544050 aatcgtggcacgatttccctgttcttccaaaccacaaatttgaag 16544006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 29720109 - 29719972
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||||||  |||||| |||||||| |||||||||| ||| | ||||||||| | | | |||||||||||||  |||| ||||| ||||    
T  29720109 atcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactag-ctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacg 29720011  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| | |||||| |||||||||||||||||||| |||||    
T  29720010 atttccctgttcttccagaccacaaatttgaagacaaat 29719972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 26170497 - 26170365
Alignment:
Q  18 tgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacgattc 116  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||||   |||||||||||| | | |||||||||||||  |||| ||||| |||||||     
T  26170497 tgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgattt 26170399  T
Q  117 ctctgttcctccagaccacaaatttgaagccaaa 150  Q
    | |||||| |||| |||| |||||||||||||||    
T  26170398 ccctgttcttccataccataaatttgaagccaaa 26170365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 16409221 - 16409084
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||| | |||||||||| ||| |||| ||||| |||||||   ||||||| |||| | | |||||||||||||  |||| ||||| ||||    
T  16409221 atcgtgtcacgattcctcaagatcgtgtcacaatttggcaccttgcaaac-cagctcacgacatcacaaaatcgtgtcacgatgccaaattcgtgtcacg 16409123  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| | ||||||||||||||||||||||||    
T  16409122 atttctctgttctttcagaccacaaatttgaagccaaat 16409084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 15465002 - 15465118
Alignment:
Q  35 atcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagacc 133  Q
    |||||| |||||||| |||||||||||||  | ||||||||||| || | ||||||||||||  |||| ||||| ||||||| |||||||| | ||||||    
T  15465002 atcgtgtcacgatttggcaccctgcaaaccag-ctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagacc 15465100  T
Q  134 acaaatttgaagccaaat 151  Q
    ||||||||||||||||||    
T  15465101 acaaatttgaagccaaat 15465118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 43592716 - 43592779
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaact 64  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  43592716 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 43592779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 9352951 - 9352814
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||| ||  |||||||||||||||  ||||||||||||   |||||||||||  | | |||||||||||||  || ||||| | ||||    
T  9352951 atcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaac-cagctcacggcattacaaaatcgtgtcacgatgccacaatcgcgtcacg 9352853  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| | || |||||||||||||||||||||    
T  9352852 atttctctgttctttcaaaccacaaatttgaagccaaat 9352814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 29722296 - 29722159
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||||||  |||||| |||||||| ||||| |||| ||| | ||||| ||| | | | |||||||||||||  |||| ||||| ||||    
T  29722296 atcgtgtcacgatttcccacaatcgtgtcacgatttggcaccatgcagactag-ctcacagcaccacgaaatcgtgtcacgatgccaaattcgtgtcacg 29722198  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| | |||||| |||||||||||||||||||| |||||    
T  29722197 atttccctgttcttccagaccacaaatttgaagacaaat 29722159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 29752267 - 29752383
Alignment:
Q  35 atcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagacc 133  Q
    ||||||||||||||| ||||||||||| || | ||||||||| | | | |||||||||||||  |||| ||||| ||||||| | |||||| ||||||||    
T  29752267 atcgtgccacgatttggcaccctgcaacctag-ctcacggcagcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacc 29752365  T
Q  134 acaaatttgaagccaaat 151  Q
    |||||||||||| |||||    
T  29752366 acaaatttgaagacaaat 29752383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 31180696 - 31180756
Alignment:
Q  4 aagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaact 64  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  31180696 aagtctctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 31180756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 31180773 - 31180822
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  31180773 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 31180822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 36931966 - 36931850
Alignment:
Q  35 atcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagacc 133  Q
    |||||| |||||||| |||||||||||||   ||||||| |||| | | |||||| ||||||  |||| ||||| ||||||| |||||||| |||| |||    
T  36931966 atcgtgtcacgatttggcaccctgcaaac-cagctcacgacatcacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccaaacc 36931868  T
Q  134 acaaatttgaagccaaat 151  Q
    ||||||||||||| ||||    
T  36931867 acaaatttgaagcgaaat 36931850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 43592797 - 43592846
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  43592797 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 43592846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 38219886 - 38219952
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctca 81  Q
    |||||||||| |||||||||||||||| |||||||| ||||||| |||||   |||||||||||||||    
T  38219886 atcgtgtcacaatttcccaagatcgtgtcacgatttggcaccctacaaac-cagctcacggcatctca 38219952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 34302645 - 34302695
Alignment:
Q  167 aggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    ||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  34302645 aggcaaattctatggtacacccaataatttgagtgtattggtacatcaaat 34302695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 6532575 - 6532628
Alignment:
Q  164 aataggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||| |||||    
T  6532575 aataggcaaattctatggtacacccaacaatttaagtgtattggtacaccaaat 6532628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 14520796 - 14520845
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| |||| |||||||||||||||||||    
T  14520796 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 14520845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 21605650 - 21605697
Alignment:
Q  170 caaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  21605650 caaattctatggtacacccaacaatttgagtgtattggtacaccaaat 21605697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 6114181 - 6114131
Alignment:
Q  167 aggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    ||||||||||||||||||| ||||||||| |||||||||||| || |||||    
T  6114181 aggcaaattctatggtacatccaacaatttgagtgtattggtccaccaaat 6114131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 35388197 - 35388239
Alignment:
Q  109 cacgattcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||||||| |||||||| |||||||||||||||||||| |||||    
T  35388197 cacgatttctctgttcttccagaccacaaatttgaagtcaaat 35388239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 11916588 - 11916539
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaac 63  Q
    ||||||||||| |||||||| |||||| |||||||  |||||||||||||    
T  11916588 atcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaac 11916539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 29751601 - 29751717
Alignment:
Q  35 atcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagacc 133  Q
    |||||| |||||||| ||||||||||| || | ||||||||| | | | ||||||||  |||  |||| || || ||||||| | |||||| ||||||||    
T  29751601 atcgtgtcacgatttggcaccctgcaacctag-ctcacggcaccacgaaatcgtgtcgtgatgccaaattcatgtcacgatttccctgttcttccagacc 29751699  T
Q  134 acaaatttgaagccaaat 151  Q
    |||||||||||| |||||    
T  29751700 acaaatttgaagacaaat 29751717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 42917117 - 42917166
Alignment:
Q  168 ggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    ||||||||||||||| |||| ||||||| ||||||||||||||| |||||    
T  42917117 ggcaaattctatggtgcacccaacaatttgagtgtattggtacaccaaat 42917166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 43237759 - 43237710
Alignment:
Q  168 ggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||| |||| |||| ||||||||||||||| |||||    
T  43237759 ggcaaattctatggtacacccaataatttgagtgtattggtacaccaaat 43237710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 1662101 - 1662057
Alignment:
Q  167 aggcaaattctatggtacacc-aacaattggagtgtattggtaca 210  Q
    |||||| |||||||||||||| ||||||| |||||||||||||||    
T  1662101 aggcaagttctatggtacacccaacaatttgagtgtattggtaca 1662057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 43625608 - 43625640
Alignment:
Q  117 ctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||||||||||||||||||||    
T  43625608 ctctgttcttccagaccacaaatttgaagccaa 43625640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 1e-59; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 25439555 - 25439407
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||  | |    
T  25439555 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctgcaaacttggctcacggcatctcaaatcgtgtcacgattacca 25439456  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  25439455 aatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaa 25439407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 25444746 - 25444600
Alignment:
Q  3 caagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaaaa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||  | |||    
T  25444746 caagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctacaaacttggctcacggcatctcaaatcgtgtcacgattaccaaa 25444647  T
Q  103 tcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  25444646 tcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaa 25444600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 39445926 - 39446083
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||  |||    
T  39445926 agcaagtttctggatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctcacggcatctcaaatcgtgtcacgattccaa 39446025  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaatacaacaa 158  Q
    ||||||| ||||||| |||||||| |||||||||||||||||||||||| | ||||||    
T  39446026 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaacaa 39446083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 44023533 - 44023385
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||  |||||||||||||  |||    
T  44023533 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcacctccaatcgtgtcacgattccaa 44023434  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  44023433 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 44023385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 1054670 - 1054522
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||  ||||| |||||||  |||    
T  1054670 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctcacggcacctccaatcgtatcacgattccaa 1054571  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  1054570 aatcgtgacacgatttctctgttcttccagaccacaaatttgaagccaa 1054522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 41391030 - 41391178
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||| ||  |||||||||| |||||||||||||||| |||||||||||||  |||    
T  41391030 agcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact-ggctcacggcatctcaaatcgtgtcacgattccaa 41391128  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaa 150  Q
    ||||||| ||||||| |||||||| |||||||||||||||||||||||||    
T  41391129 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaa 41391178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 43988105 - 43987957
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| ||||||||||||||| ||||||||||| |||||||||||  || ||||||||||||||| || |||| |||||||||||||| || |    
T  43988105 agcaagtttctgaatcgtgtcacgatttaccaagatcgtggcacgattttgcttccagcaaacttggctcactgcctctctgatcgtgtcacgattgcca 43988006  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||| ||||||||||||||| ||  ||| |||||||||||||||||||    
T  43988005 aatcgcgacacgattcctctgctctcccaaaccacaaatttgaagccaa 43987957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 19361056 - 19360919
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||   |||||||||||| | | |||||||||||||  |||| ||||| ||||    
T  19361056 atcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacg 19360958  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| | ||||||||||||||||||||||||    
T  19360957 atttctctgttctttcagaccacaaatttgaagccaaat 19360919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 44203374 - 44203230
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgca 99  Q
    |||||||||||||||||||||||||||| || | ||||||||||||||| |||||| ||||| | | |||||||||| |||  |||||||||||||  ||    
T  44203374 agcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcacctccaatcgtgtcacgattcca 44203276  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||| ||||||| | |||||| ||||||||||||||||||||    
T  44203275 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 44203230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 19365912 - 19365775
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||   |||||||||||| | | |||||||||||||  |||| ||||| ||||    
T  19365912 atcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacg 19365814  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| | |||||||||||||||||| |||||    
T  19365813 atttctctgttctttcagaccacaaatttgaagtcaaat 19365775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 41398685 - 41398778
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgat 95  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||||||||||| |||||||||||||    
T  41398685 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tggctcacggcatctcaaatcgtgtcacgat 41398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 51765134 - 51764997
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||| | |||||||||| |||||||| |||||||||||||  | ||||||||||| | | |||||||||||||  |||| ||||| ||||    
T  51765134 atcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccag-ctcacggcatcacgaaatcgtgtcacgatgtcaaattcgtgtcacg 51765036  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| |||||||||||||||| |||||||||    
T  51765035 atttctctgttcttccagaccacaaatttaaagccaaat 51764997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 20622664 - 20622814
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    ||||||||||   |||||||||||||||||||  |||||| |||||||| |||||||||| ||| | ||||||||| | | | |||||||||||||  ||    
T  20622664 agcaagtttcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactag-ctcacggcaccacgaaatcgtgtcacgatgcca 20622762  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    || ||||| ||||||| | |||||| |||||||||||||||||||| |||||    
T  20622763 aattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 20622814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 9036159 - 9036015
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    ||||||||||  ||||||||||||||||  ||| || ||| ||||| |||||||||||||| || | ||||||||| | | | |||||||||||||  ||    
T  9036159 agcaagtttcacgatcgtgtcacgatttaacaaaatagtgacacgaatttgcaccctgcaacctag-ctcacggcaccccgaaatcgtgtcacgatacca 9036061  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||| ||||||| | |||||| ||||||||||||||||||||    
T  9036060 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 9036015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 24202374 - 24202258
Alignment:
Q  35 atcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagacc 133  Q
    |||||| |||||||| |||||||||||||  | ||||||||||| | | |||||||||||||  |||| ||||| ||||||| |||||||| ||||||||    
T  24202374 atcgtgtcacgatttggcaccctgcaaaccag-ctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagacc 24202276  T
Q  134 acaaatttgaagccaaat 151  Q
    ||||||||||||||||||    
T  24202275 acaaatttgaagccaaat 24202258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 24793803 - 24793709
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgat 95  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| | |||||||||| ||| | |||||||||||||    
T  24793803 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcacctcgaaatcgtgtcacgat 24793709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 24786981 - 24786918
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaact 64  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  24786981 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 24786918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 9986929 - 9986792
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||||||| |||||| |||||||| |||| ||||| ||  | ||||||||| | | | ||||||| |||||  |||| ||||| ||||    
T  9986929 atcgtgtcacgatttcccaaaatcgtgtcacgatttggcacactgcagaccag-ctcacggcaccacgaaatcgtgttacgatgtcaaattcgtgtcacg 9986831  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| | |||||| |||||||||||||||||||| |||||    
T  9986830 atttccctgttcttccagaccacaaatttgaagacaaat 9986792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 40282102 - 40281965
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    ||||||||||||||| |||  |||||| |||||||| ||||||||||| || | ||||||||| | | | |||||||||||||  |||| ||||| ||||    
T  40282102 atcgtgtcacgatttaccacaatcgtgtcacgatttggcaccctgcaacctag-ctcacggcaccactaaatcgtgtcacgatgccaaattcgtgtcacg 40282004  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| | || ||| |||||||||||||||||||| |||||    
T  40282003 atttccctattcttccagaccacaaatttgaagacaaat 40281965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 21053683 - 21053552
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||||||  |||||| |||||||| ||||| ||||  || | ||||| ||| | | | |||||||||||||  |||| ||||| ||||    
T  21053683 atcgtgtcacgatttcccacaatcgtgtcacgatttggcaccttgcattctag-ctcactgcaccacgaaatcgtgtcacgatgccaaattcgtgtcacg 21053585  T
Q  113 attcctctgttcctccagaccacaaatttgaag 145  Q
    ||| | |||||| ||||||||||||||||||||    
T  21053584 atttccctgttcttccagaccacaaatttgaag 21053552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 31931106 - 31931055
Alignment:
Q  166 taggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  31931106 taggcaaattctatggtacatccaacaatttgagtgtattggtacatcaaat 31931055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 21536170 - 21536109
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaa-tacaacaaaa 160  Q
    |||||||| ||||||| |||||||| |||| |||||||||||||||||||| ||||||||||    
T  21536170 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaattacaacaaaa 21536109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 24793723 - 24793674
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  24793723 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 24793674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 26644517 - 26644382
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    ||||||||||| |||| ||| |||||||||||||||  |||| |||||||  | |||| | |||  || | |||||| |||||  |||||||||  ||||    
T  26644517 atcgtgtcacgttttcacaaaatcgtgccacgatttgacaccgtgcaaaccag-ctcatgacattacaaaatcgtgttacgatgacaaaatcgtatcacg 26644419  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||||||| |||| ||||||||||| |||||||    
T  26644418 attcctctgttcttccaaaccacaaatttaaagccaa 26644382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 13604235 - 13604102
Alignment:
Q  18 tgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacgattc 116  Q
    |||||||||| | ||| |||||| ||||||||  ||| ||||||||  | |||||| |||| || | ||||| ||||||  || ||||||| |||||||     
T  13604235 tgtcacgattccacaaaatcgtgtcacgatttgacacactgcaaaccag-ctcacgacatcacaaaatcgtgccacgataccacaatcgtgtcacgattt 13604137  T
Q  117 ctctgttcctccagaccacaaatttgaagccaaat 151  Q
    |||||||| |||| ||||||||||||||| |||||    
T  13604136 ctctgttcttccaaaccacaaatttgaagacaaat 13604102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 35305150 - 35305200
Alignment:
Q  167 aggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  35305150 aggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaat 35305200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 922248 - 922199
Alignment:
Q  168 ggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  922248 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaat 922199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 13598967 - 13599016
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| |||| |||||||||||||||||||    
T  13598967 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 13599016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 27295058 - 27295107
Alignment:
Q  168 ggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  27295058 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaat 27295107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 37498744 - 37498793
Alignment:
Q  168 ggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  37498744 ggcaaattctatggtacatccaacaatttgagtgtattggtacaccaaat 37498793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 46771144 - 46771097
Alignment:
Q  162 taaataggcaaattctatggtacacc-aacaattggagtgtattggta 208  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||||||    
T  46771144 taaataggcaagttctatggtacacctaacaatttgagtgtattggta 46771097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 51984936 - 51984983
Alignment:
Q  170 caaattctatggtacac-caacaattggagtgtattggtacatcaaat 216  Q
    ||||||||||||||||| ||| |||| |||||||||||||||||||||    
T  51984936 caaattctatggtacactcaataatttgagtgtattggtacatcaaat 51984983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 52303011 - 52303062
Alignment:
Q  166 taggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    ||||||||||||||| |||||| || |||| |||||||||||||||||||||    
T  52303011 taggcaaattctatgatacacccaataatttgagtgtattggtacatcaaat 52303062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 34256452 - 34256502
Alignment:
Q  167 aggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||| |||||    
T  34256452 aggcaaattctatggtacacccaacaatttgagtgtatcggtacaccaaat 34256502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 41073267 - 41073313
Alignment:
Q  165 ataggcaaattctatggtaca-ccaacaattggagtgtattggtaca 210  Q
    ||||||||||||||||||||| ||||| ||| |||||||||||||||    
T  41073267 ataggcaaattctatggtacacccaaccatttgagtgtattggtaca 41073313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 13659840 - 13659889
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||| || ||||||| ||||||| ||||| |||||||||||||||||||    
T  13659840 aaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaa 13659889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 37070334 - 37070383
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| |||| |||||||||||||| ||||    
T  37070334 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaaaccaa 37070383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 39190963 - 39190914
Alignment:
Q  168 ggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    ||||| |||||||||||| ||||||||| ||||||||||||||| |||||    
T  39190963 ggcaagttctatggtacatccaacaatttgagtgtattggtacaccaaat 39190914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 51369329 - 51369378
Alignment:
Q  168 ggcaaattctatggtacac-caacaattggagtgtattggtacatcaaat 216  Q
    ||||||||||||||||||| |||||||| |||||||||| |||| |||||    
T  51369329 ggcaaattctatggtacactcaacaatttgagtgtattgatacaccaaat 51369378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 28220674 - 28220722
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaa 62  Q
    ||||||||||| |||||||| |||||| |||||||  ||||||||||||    
T  28220674 atcgtgtcacgttttcccaaaatcgtgtcacgattgggcaccctgcaaa 28220722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 28223869 - 28223917
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaa 62  Q
    ||||||||||| |||||||| |||||| |||||||  ||||||||||||    
T  28223869 atcgtgtcacgttttcccaaaatcgtgtcacgattgggcaccctgcaaa 28223917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 38262543 - 38262491
Alignment:
Q  165 ataggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    |||||||| |||||||||||||  ||||||| ||||||||||||||| |||||    
T  38262543 ataggcaagttctatggtacacttaacaatttgagtgtattggtacaccaaat 38262491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 4e-56; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 2672575 - 2672425
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||  || ||||||||||||| ||||||||| ||||||||||||||  |||    
T  2672575 agcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctcccggcatctccgatcgtgtcacgattacaa 2672476  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2672475 aatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaat 2672425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 2676731 - 2676581
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||  || ||||||||||||| || |||||| ||||||||||||||  |||    
T  2676731 agcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctcccgacatctccgatcgtgtcacgattacaa 2676632  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2676631 aatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaat 2676581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 22172818 - 22172670
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| |||||||||||| ||| | |||||||||||||  ||    
T  22172818 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tggctcacggcacctcgaaatcgtgtcacgatgcca 22172720  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  22172719 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 22172670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 24968548 - 24968692
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||||| || || | |||||||||||||| || |    
T  24968548 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctccccgatcgtgtcacgattgcca 24968647  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||||||||||||| ||||| |||| ||||| |||||||||    
T  24968648 aatcgtgacacgattcctttgttcttccaaaccactaatttgaag 24968692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 40372412 - 40372264
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| | |||||||||| ||| | |||||||||||||  ||    
T  40372412 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcacctcgaaatcgtgtcacgatgcca 40372314  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  40372313 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 40372264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 8512671 - 8512815
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||  || |||||||| |||||| || || | |||||||||||||  ||||    
T  8512671 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctccctgatcgtgtcacgactgcaa 8512770  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||||||||||||||||||||  ||| ||||| |||||||||    
T  8512771 aatcgtgacacgattcctctgttctcccaaaccactaatttgaag 8512815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 8517551 - 8517695
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||  || |||||||| |||||| || || | |||||||||||||  ||||    
T  8517551 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctccctgatcgtgtcacgactgcaa 8517650  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||||||||||||||||||||  | | ||||| |||||||||    
T  8517651 aatcgtgacacgattcctctgttctcctaaaccactaatttgaag 8517695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 32475915 - 32476063
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||   | |  |||||||||||| || || | |||||||||||||| || |    
T  32475915 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagagaacttggctcactgcctccctgatcgtgtcacgatggcca 32476014  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  32476015 aatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaa 32476063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 32480773 - 32480921
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||   | |  |||||||||||| || || | |||||||||||||| || |    
T  32480773 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagagaacttggctcactgcctccctgatcgtgtcacgatggcca 32480872  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  32480873 aatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaa 32480921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 8477846 - 8477994
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||| ||| || |||||| | |||||||||| ||| | |||||||||||||  ||    
T  8477846 agcaagtttctcaatcgtgtcacgatttcccaagatcgtgccacgatttggcatccagcaaac-tagctcacggcacctcgaaatcgtgtcacgatgcca 8477944  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||| ||| |||||||| ||||||||||||||||||||||||    
T  8477945 aaatcgtgtcacaatttctctgttcttccagaccacaaatttgaagccaa 8477994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 7167726 - 7167874
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatc-tcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| | |||||||||| | | | || ||||||||||  ||    
T  7167726 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcaccttgaaattgtgtcacgatgcca 7167824  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| |||||| |||||||||||||||||    
T  7167825 aaatcgtgtcacgatttctctgttcttccagaacacaaatttgaagccaa 7167874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 18656872 - 18657021
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||| ||  ||||||||||||  |||||||| | | | |||||||||||||  ||    
T  18656872 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttcacggcaccacgaaatcgtgtcacgatgcca 18656971  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| || |||| |||||||| | ||||||||||||||||||||||    
T  18656972 aaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaa 18657021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 54634866 - 54634722
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    ||||||||||  ||||||||||||||||||||  ||||||||||||||||||||||||| ||||| |||||||||| | | | |||||||||| ||  ||    
T  54634866 agcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgattttgcaccctgc-aacttagctcacggcaccccgaaatcgtgtcacaatgcca 54634768  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||| ||||||| | |||||| ||||||||||||||||||||    
T  54634767 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 54634722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 28501308 - 28501160
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||| |   |||||||||| | ||||||||  ||  | |||||||||||||  ||    
T  28501308 agcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggtgtcctgcaaactag-ctcacggccccttgaaatcgtgtcacgatgcca 28501210  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||| ||||||||||||||||||    
T  28501209 aaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaa 28501160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 28503475 - 28503327
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||| ||  || ||||||| | ||||||||  ||  | |||||||||||||  ||    
T  28503475 agcaagtttctgaattgtgtcacgatttcccaagatcgtgccacgatttggcgtccagcaaactag-ctcacggccccttgaaatcgtgtcacgatgcca 28503377  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||| ||||||||||||||||||    
T  28503376 aaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaa 28503327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 4598950 - 4599095
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttccca-agatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgc 98  Q
    ||||||||||| |||||||||||||||||||| | ||||||||||||||| |||||| ||||| | | ||||||||||||  | |||||||| ||||| |    
T  4598950 agcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatccgaaatcgtgtcgcgatccc 4599048  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||||| ||||||| | |||||| |||| |||||||||||||||    
T  4599049 aaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 4599095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 4601171 - 4601316
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttccca-agatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgc 98  Q
    ||||||||||| |||||||||||||||||||| | ||||||||||||||| |||||| ||||| | | ||||||||||||  | |||||||| ||||| |    
T  4601171 agcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatccgaaatcgtgtcgcgatccc 4601269  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||||| ||||||| | |||||| |||| |||||||||||||||    
T  4601270 aaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 4601316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 6716241 - 6716101
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    ||||||||||  ||||||||||||||||||||  |||||| |||||||||||||||||| ||| | |||||||||| | | | |||||||||||||  ||    
T  6716241 agcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgc-aacctagctcacggcaccccgaaatcgtgtcacgatacca 6716143  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaattt 141  Q
    |||||||| ||||||| | |||||| ||||||||||||||||    
T  6716142 aaatcgtgtcacgatttccctgttcttccagaccacaaattt 6716101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 1306447 - 1306597
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||  | ||||||||||||||||||||||||||| |||||||| |||||||||||||   ||||||| || | | | |||||||||||||  ||    
T  1306447 agcaagtttgagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacgacaccacgaaatcgtgtcacgatgcca 1306545  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    || || || ||||||| |||||||| ||||||||| ||||||||||||||||    
T  1306546 aattcatgtcacgatttctctgttcttccagaccataaatttgaagccaaat 1306597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 23198386 - 23198523
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||| | | | |||||| |||||||| |||||||||||||  | ||||||||||| || | ||||||||||||  |||| ||||| ||||    
T  23198386 atcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaaaccag-ctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacg 23198484  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| ||||||||||||||||||||||||||    
T  23198485 atttctctgttcttccagaccacaaatttgaagccaaat 23198523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 26928224 - 26928087
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||| | |||||| ||| |||||||| |||||||||||||   |||||||||||  | | |||||||||||||  |||| ||||| ||||    
T  26928224 atcgtgtcacgattccacaagattgtgtcacgatttggcaccctgcaaac-cagctcacggcataacaaaatcgtgtcacgatgccaaattcgtgtcacg 26928126  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| ||||||||||||||||||||||||||    
T  26928125 atttctctgttcttccagaccacaaatttgaagccaaat 26928087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 3617190 - 3617046
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgca 99  Q
    ||||||||||  |||||||||||||||| || | |||||| |||||||| |||||| ||||| | | ||||||||||||  | |||||||||||||  ||    
T  3617190 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgacacgattt-gcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatacca 3617092  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||| ||||||| | |||||| ||||||||||||||||||||    
T  3617091 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 3617046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 165
Target Start/End: Original strand, 37726155 - 37726307
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||| | ||| |||||| ||||||||  ||||||||||||  | ||||||||||| || | ||||||||||||  |||| ||||| ||||    
T  37726155 atcgtgtcacgattccacaaaatcgtgtcacgatttgacaccctgcaaaccag-ctcacggcatcacaaaatcgtgtcacgatatcaaattcgtgtcacg 37726253  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat-acaacaaaactaaa 165  Q
    ||| |||||||| |||| |||||||||||||||||||||  |||||||||||||    
T  37726254 atttctctgttcttccaaaccacaaatttgaagccaaatctcaacaaaactaaa 37726307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 23200585 - 23200722
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||| | | | |||||| |||||||| |||||||||||||   |||||| ||||| | | |||||||||||||  |||| ||||| ||||    
T  23200585 atcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaaac-cagctcacagcatcacaaaatcgtgtcacgatgccaaattcgtgtcacg 23200683  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| ||||||||||||||||||||||||||    
T  23200684 atttctctgttcttccagaccacaaatttgaagccaaat 23200722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 27352237 - 27352092
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatc-tcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |    ||||||||   |||||||||| | | | |||||||||||||  ||    
T  27352237 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggtgttctgcaaac-aagctcacggcaccttgaaatcgtgtcacgatgcca 27352139  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagc 146  Q
    |||||||| |||||||  ||||||| || ||||||||||||| ||||    
T  27352138 aaatcgtgtcacgatttttctgttcttcgagaccacaaatttaaagc 27352092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 33386281 - 33386144
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||| | ||| |||||| |||||||| |||||||||||||  | ||||||||||| || | ||||||||||||  |||| ||||| ||||    
T  33386281 atcgtgtcacgattccacaaaatcgtgtcacgatttggcaccctgcaaaccag-ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacg 33386183  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| | | ||||||||||||||||||||||    
T  33386182 atttctctgttctttcggaccacaaatttgaagccaaat 33386144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 10055962 - 10055812
Alignment:
Q  1 agcaagtttctggatcgtgtcacgattt-cccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgc 98  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |||||||| |||||| ||||| | |  |||||||||||  | |||| ||||||||  |    
T  10055962 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgatacc 10055864  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaa 150  Q
    ||||||||| ||||||| | |||||| |||| ||||||||||||||| ||||    
T  10055863 aaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10055812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 10058184 - 10058034
Alignment:
Q  1 agcaagtttctggatcgtgtcacgattt-cccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgc 98  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |||||||| |||||| ||||| | |  |||||||||||  | |||| ||||||||  |    
T  10058184 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgatacc 10058086  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaa 150  Q
    ||||||||| ||||||| | |||||| |||| ||||||||||||||| ||||    
T  10058085 aaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10058034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 10060406 - 10060256
Alignment:
Q  1 agcaagtttctggatcgtgtcacgattt-cccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgc 98  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |||||||| |||||| ||||| | |  |||||||||||  | |||| ||||||||  |    
T  10060406 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgatacc 10060308  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaa 150  Q
    ||||||||| ||||||| | |||||| |||| ||||||||||||||| ||||    
T  10060307 aaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10060256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 10062628 - 10062478
Alignment:
Q  1 agcaagtttctggatcgtgtcacgattt-cccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgc 98  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |||||||| |||||| ||||| | |  |||||||||||  | |||| ||||||||  |    
T  10062628 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgatacc 10062530  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaa 150  Q
    ||||||||| ||||||| | |||||| |||| ||||||||||||||| ||||    
T  10062529 aaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10062478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 10064850 - 10064700
Alignment:
Q  1 agcaagtttctggatcgtgtcacgattt-cccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgc 98  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |||||||| |||||| ||||| | |  |||||||||||  | |||| ||||||||  |    
T  10064850 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgatacc 10064752  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaa 150  Q
    ||||||||| ||||||| | |||||| |||| ||||||||||||||| ||||    
T  10064751 aaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10064700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 10067072 - 10066922
Alignment:
Q  1 agcaagtttctggatcgtgtcacgattt-cccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgc 98  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |||||||| |||||| ||||| | |  |||||||||||  | |||| ||||||||  |    
T  10067072 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgatacc 10066974  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaa 150  Q
    ||||||||| ||||||| | |||||| |||| ||||||||||||||| ||||    
T  10066973 aaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10066922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 800829 - 800692
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||||||  |||||| |||||||| |||||| ||||||  | ||||||||||| | | |||||||||||||  |||| ||||| ||||    
T  800829 atcgtgtcacgatttcccacaatcgtgtcacgatttggcaccccgcaaaccag-ctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacg 800731  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| | |||||| ||||||||||||||| |||| |||||    
T  800730 atttccctgttcttccagaccacaaattcgaagacaaat 800692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 10208935 - 10208790
Alignment:
Q  1 agcaagtttctggatcgtgtcacgattt-cccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgc 98  Q
    ||||||||||| |||||||||||||||| ||||| ||||||||||||||| |||||| ||||| | |  |||||||||||  | |||| ||||||||  |    
T  10208935 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgccacgattt-gcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgatacc 10208837  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||||| || |||| | |||||| |||| |||||||||||||||    
T  10208836 aaaatcgtgtcatgatttccctgttcttccaaaccacaaatttgaag 10208790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2671221 - 2671158
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaact 64  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  2671221 agcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaact 2671158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 8738679 - 8738616
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaact 64  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  8738679 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaact 8738616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9090917 - 9090854
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaact 64  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  9090917 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaact 9090854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 10211135 - 10210994
Alignment:
Q  1 agcaagtttctggatcgtgtcacgattt-cccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgc 98  Q
    ||||||||||| |||||||||| ||||| ||||| ||||||||||||||| |||||| ||||| | |  |||||||||||  | |||| ||||||||  |    
T  10211135 agcaagtttcttgatcgtgtcatgattttcccaaaatcgtgccacgattt-gcacccctgcaaccctaactcacggcatcctaaatcgcgtcacgatacc 10211037  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaattt 141  Q
    ||||||||| ||||||| | |||||| |||| |||||||||||    
T  10211036 aaaatcgtgtcacgatttccctgttcttccaaaccacaaattt 10210994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 25637169 - 25637029
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgca-ccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgc 98  Q
    ||||||||||  ||||||||||||||||||||  |||||||||||| |||||| |||||||| | | |||| | ||| ||| | |||||||||||||  |    
T  25637169 agcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacga-tttgcacccctgcaaccctagctctc-gcacctcgaaatcgtgtcacgatgcc 25637072  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaattt 141  Q
    | ||||||| ||||||| | |||||| ||||||||||||||||    
T  25637071 acaatcgtgtcacgatttccctgttcttccagaccacaaattt 25637029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 7782589 - 7782705
Alignment:
Q  35 atcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagacc 133  Q
    |||||| |||||||| |||||||||||||  | ||||| ||||| | | |||||||||||||  |||| ||||| ||||||| | |||||| || |||||    
T  7782589 atcgtgtcacgatttggcaccctgcaaaccag-ctcaccgcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttctagacc 7782687  T
Q  134 acaaatttgaagccaaat 151  Q
    ||||||||||||||||||    
T  7782688 acaaatttgaagccaaat 7782705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6718425 - 6718365
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaa 61  Q
    ||||||||||  ||||||||||||||||||||  |||||| ||||||||||||||||||||    
T  6718425 agcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaa 6718365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 27453437 - 27453574
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||| | ||  ||| || |||||||| ||||||| |||||  | ||||||||||| || | ||||||||||||  |||| ||||| |||     
T  27453437 atcgtgtcacgattccacacaatcatgtcacgatttggcaccctacaaaccag-ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcaca 27453535  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| ||||| || | ||||||||||||||||||||||||    
T  27453536 atttctctgctctttcagaccacaaatttgaagccaaat 27453574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 32143803 - 32143884
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgat 95  Q
    |||||||||||||| | |||||||||| |||||||| ||||||||||||| | |||||||||||| | | |||||||||||||    
T  32143803 atcgtgtcacgattccacaagatcgtgtcacgatttggcaccctgcaaac-tagctcacggcatcacaaaatcgtgtcacgat 32143884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 37408179 - 37408043
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    ||||||||||||||| |  | |||||||||||||||  ||||||||||||  | |||||||||   || | ||||||||||||  || ||||||| ||||    
T  37408179 atcgtgtcacgatttacaca-atcgtgccacgatttgacaccctgcaaaccag-ctcacggcactacaaaatcgtgtcacgatgccacaatcgtgtcacg 37408082  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| || ||||| |||| |||||||||||||||||||||    
T  37408081 atttctttgttcttccaaaccacaaatttgaagccaaat 37408043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 27974493 - 27974440
Alignment:
Q  98 caaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    |||||||||| ||||||| |||||||| |||| |||||||||||||||||||||    
T  27974493 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaat 27974440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 32143868 - 32143921
Alignment:
Q  98 caaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    |||||||||| ||||||| |||||||| | ||||||||||||||||||||||||    
T  32143868 caaaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaat 32143921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 29787005 - 29786954
Alignment:
Q  166 taggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  29787005 taggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaat 29786954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 36029658 - 36029717
Alignment:
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa-atacaaca 157  Q
    ||||||||| ||||||| |||||||| |||| ||||||||||||||||||| ||||||||    
T  36029658 aaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaaca 36029717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 42067577 - 42067628
Alignment:
Q  166 taggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  42067577 taggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaat 42067628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 8738599 - 8738550
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||| || ||||||| |||||||| ||||||||||||||||||||||||    
T  8738599 aaatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaa 8738550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 9090837 - 9090788
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||| || ||||||| |||||||| ||||||||||||||||||||||||    
T  9090837 aaatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9090788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 21711768 - 21711817
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| |||| |||||||||||||||||||    
T  21711768 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 21711817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 30709316 - 30709267
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| |||| |||||||||||||||||||    
T  30709316 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 30709267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 27079788 - 27079736
Alignment:
Q  165 ataggcaaattctatggtacac-caacaattggagtgtattggtacatcaaat 216  Q
    |||||||| ||||||||||||| |||||||| ||||||||||||||| |||||    
T  27079788 ataggcaagttctatggtacactcaacaatttgagtgtattggtacaccaaat 27079736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 27082755 - 27082703
Alignment:
Q  165 ataggcaaattctatggtacac-caacaattggagtgtattggtacatcaaat 216  Q
    |||||||| ||||||||||||| |||||||| ||||||||||||||| |||||    
T  27082755 ataggcaagttctatggtacactcaacaatttgagtgtattggtacaccaaat 27082703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 45282722 - 45282662
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaa 61  Q
    ||||||||||  |||||||||||||||| || | |||||| ||||| ||||||||||||||    
T  45282722 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaa 45282662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 11140245 - 11140296
Alignment:
Q  166 taggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||||| |||| |||| ||||||||||||||| |||||    
T  11140245 taggcaaattctatggtacacccaataatttgagtgtattggtacaccaaat 11140296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 27027187 - 27027318
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaaaatcgtgacacga 113  Q
    ||||||||||| |||||||| |||||| |||||||  |||| ||||||||   |||||| || |   | ||||||| ||| |    |||||||| |||||    
T  27027187 atcgtgtcacgttttcccaaaatcgtgacacgattgagcactctgcaaaccatgctcactgcctgggaaatcgtgttacgttgatgaaatcgtgtcacga 27027286  T
Q  114 ttcctctgttcctccagaccacaaatttgaag 145  Q
    || |||||||| |||| |||||||||||||||    
T  27027287 tttctctgttcttccaaaccacaaatttgaag 27027318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 31308875 - 31308926
Alignment:
Q  166 taggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||||||| ||||||| ||||||||||| ||| |||||    
T  31308875 taggcaaattctatggtacacctaacaatttgagtgtattggaacaccaaat 31308926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 16264896 - 16264954
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa-atacaaca 157  Q
    |||||||| ||||||| | |||||| |||| ||||||||||||||||||| ||||||||    
T  16264896 aaatcgtgtcacgatttcgctgttcttccaaaccacaaatttgaagccaatatacaaca 16264954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 27647475 - 27647521
Alignment:
Q  165 ataggcaaattctatggtacac-caacaattggagtgtattggtaca 210  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||    
T  27647475 ataggcaaattctatggtacactcaaaaatttgagtgtattggtaca 27647521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 29347663 - 29347617
Alignment:
Q  171 aaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    ||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  29347663 aaattctatggtacacccaacaatttgagtgtattggtacaccaaat 29347617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 35171601 - 35171551
Alignment:
Q  166 taggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaa 215  Q
    ||||||| |||||||||||||| ||||||| ||||||||||||||| ||||    
T  35171601 taggcaagttctatggtacacccaacaatttgagtgtattggtacaccaaa 35171551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 39630300 - 39630254
Alignment:
Q  165 ataggcaaattctatggtaca-ccaacaattggagtgtattggtaca 210  Q
    ||||||||||||||||||||| ||||||||| ||||||||| |||||    
T  39630300 ataggcaaattctatggtacatccaacaatttgagtgtattagtaca 39630254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 6718345 - 6718300
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||| ||||||| | |||||| ||||||||||||||||||||    
T  6718345 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 6718300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 8370095 - 8370046
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaac 63  Q
    ||||||||||| |||||||| |||||| |||||||  |||||||||||||    
T  8370095 atcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaac 8370046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 16264829 - 16264878
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaac 63  Q
    ||||||||||| |||||||| |||||| |||||||  |||||||||||||    
T  16264829 atcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaac 16264878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 16498694 - 16498645
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||| || ||||||| ||||||| ||||| |||||||||||||||||||    
T  16498694 aaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaa 16498645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 39032075 - 39032026
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| |||| || ||||||||||||||||    
T  39032075 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaa 39032026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 40734132 - 40734087
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||| ||||||| |||||||| |||| |||||||||||||||    
T  40734132 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 40734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 40734217 - 40734168
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaac 63  Q
    ||||||||||| |||||||| |||||| |||||||  |||||||||||||    
T  40734217 atcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaac 40734168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 40735148 - 40735099
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaac 63  Q
    ||||||||||| |||||||| |||||| |||||||  |||||||||||||    
T  40735148 atcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaac 40735099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 42364333 - 42364284
Alignment:
Q  168 ggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||| |||| |||| ||||||||||||||| |||||    
T  42364333 ggcaaattctatggtacacccaataatttgagtgtattggtacaccaaat 42364284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 45282642 - 45282597
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||| ||||||| | |||||| ||||||||||||||||||||    
T  45282642 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 45282597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 149
Target Start/End: Complemental strand, 1730957 - 1730917
Alignment:
Q  109 cacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||||| |||||||| |||| |||||||||||||||||||    
T  1730957 cacgatttctctgttcttccaaaccacaaatttgaagccaa 1730917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 6e-55; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 16839174 - 16839322
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||||| || |    
T  16839174 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgcca 16839273  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||||||    
T  16839274 aatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 16839322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 33330089 - 33329941
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||||| || |    
T  33330089 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgcca 33329990  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||||||    
T  33329989 aatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 33329941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 33335586 - 33335438
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||||| || |    
T  33335586 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgcca 33335487  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||| || ||||||||||||||| |||| |||||||||||||||||||    
T  33335486 aatcgcgaaacgattcctctgttcttccaaaccacaaatttgaagccaa 33335438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 6005850 - 6005998
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||| |||||||||||||| || |    
T  6005850 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcatggcatctccgatcgtgtcacgattgcca 6005949  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||| |||||||||||||||||  |||| |||||||||||||||||||    
T  6005950 aatcgcgacacgattcctctgtttttccaaaccacaaatttgaagccaa 6005998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 6438927 - 6439085
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||| |||  |||||||||||||  |||    
T  6438927 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattatgcatccagcaaacttggctcacggcacctccaatcgtgtcacgattccaa 6439026  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaatacaacaaa 159  Q
    ||||||| ||||||| || ||||| ||||||||| |||||||||||||| | |||||||    
T  6439027 aatcgtgtcacgatttctatgttcttccagaccataaatttgaagccaatttcaacaaa 6439085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 28155227 - 28155133
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgat 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28155227 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgat 28155133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 30125174 - 30125026
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||| ||  |||||||||| | ||||||||| ||| | |||||||||||||  ||    
T  30125174 agcaagtttctgaatcgtgtcacgatttcccaaaatcgtgccacgatttggcgtcctgcaaactag-ctcacggcacctcgaaatcgtgtcacgatgcca 30125076  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  30125075 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 30125026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 11857411 - 11857559
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||| ||  |||||||||| | ||||||||  ||  | |||||||||||||  ||    
T  11857411 agcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactag-ctcacggccacttgaaatcgtgtcacgatgcca 11857509  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  11857510 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 11857559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 14742082 - 14741934
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||| ||  |||||||||| | |||||| |  ||  | |||||||||||||  ||    
T  14742082 agcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactag-ctcacgaccacttgaaatcgtgtcacgatgcca 14741984  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  14741983 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 14741934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 22010345 - 22010197
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacgg-catctcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| |  || |||| ||  | | |||||||||||||  ||    
T  22010345 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-taacttacggccacttgaaatcgtgtcacgatgcca 22010247  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  22010246 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 22010197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 5343908 - 5344056
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||   | | | |||||||||||  | || | ||||||||||||||  | |    
T  5343908 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagaagacttggctcacttcctccctgatcgtgtcacgatgacca 5344007  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||||||||||||| ||||||||  ||| |||||||||||||||||||    
T  5344008 aatcgtgacacgatttctctgttctcccaaaccacaaatttgaagccaa 5344056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 6136391 - 6136535
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||   |||||||| | | ||||||||||||  | |||||||| ||||  |||    
T  6136391 agcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattttcacccctgcaaccctagctcacggcatccgaaatcgtgtctcgattccaa 6136490  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||| ||||||| | |||||| |||| |||||||||||||||    
T  6136491 aatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 6136535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 16578945 - 16579089
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    ||||||||||  |||||||||||||||| || | ||||||||||||||||||||||||| ||| | |||||||||| | | | |||||||||||||  ||    
T  16578945 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgc-aacctagctcacggcaccccgaaatcgtgtcacgatacca 16579043  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||| ||||||| | |||||| ||||||||||||||||||||    
T  16579044 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 16579089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 16616435 - 16616291
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    ||||||||||  |||||||||||||||| || | ||||||||||||||||||||||||| ||| | |||||||||| | | | |||||||||||||  ||    
T  16616435 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgc-aacctagctcacggcaccccgaaatcgtgtcacgatacca 16616337  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||| ||||||| | |||||| ||||||||||||||||||||    
T  16616336 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 16616291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 2171960 - 2172097
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||   |||||||||||| | | |||||||||||||  |||| || || | ||    
T  2171960 atcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacgaaatcgtgtcacgatgccaaattcatgtcccg 2172058  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| ||||||||||||||||||| ||||||    
T  2172059 atttctctgttcttccagaccacaaatttgaaaccaaat 2172097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 22709501 - 22709638
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||   ||||| |||||| | | ||||||||||| |  |||| ||||| || |    
T  22709501 atcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcatggcatcacaaaatcgtgtcacgttgccaaattcgtgtcatg 22709599  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| ||||||||||||||||||||||||||    
T  22709600 atttctctgttcttccagaccacaaatttgaagccaaat 22709638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 27647624 - 27647475
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    ||||||||||  ||||||||||||||||| ||  ||||||||||||||||||||||||| ||| | |||||||||| | | | |||||||||||||  ||    
T  27647624 agcaagtttcacgatcgtgtcacgatttctcacaatcgtgccacgattttgcaccctgc-aacctagctcacggcaccccgaaatcgtgtcacgatgcca 27647526  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaa 150  Q
     ||||||| ||||||| | |||||| |||||||||||||||||||| ||||    
T  27647525 caatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 27647475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 5674386 - 5674238
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    ||||||||||   ||||||||||||||||||||||| ||| |||||||| |||||||||||||   |||||||||||| | | ||| |||||||||  ||    
T  5674386 agcaagtttcaaaatcgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacaaaatcatgtcacgatgcca 5674288  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    || || || ||||||| |||||||| ||||||||||||||||||||||||    
T  5674287 aattcatgtcacgatttctctgttcttccagaccacaaatttgaagccaa 5674238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 25420953 - 25420809
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgca 99  Q
    ||||||||||  |||||||||||||||| || | ||||||||||||||| |||||| ||||| | | ||||||||||||  | ||||||||||| || ||    
T  25420953 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatccgaaatcgtgtcacggtccca 25420855  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||| ||| ||||||| | |||||| ||||||||||||||||||||    
T  25420854 aaattgtgtcacgatttccctgttcttccagaccacaaatttgaag 25420809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 33342531 - 33342676
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttccca-agatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgc 98  Q
    ||||||||||| |||||||||||||||||||| | ||||||||||||||| |||||| ||||| | | ||||||||||||  | |||| ||| ||||| |    
T  33342531 agcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatccgaaatcgcgtcgcgatccc 33342629  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||||| ||||||| |  ||||| |||| |||||||||||||||    
T  33342630 aaaatcgtgtcacgatttccatgttcttccaaaccacaaatttgaag 33342676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 16554610 - 16554466
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    ||||||||||  |||||||||||||||| || | |||||||||| ||||||||||||| || || | ||||||||| | | | |||||||||||||  ||    
T  16554610 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctag-ctcacggcaccccgaaatcgtgtcacgatacca 16554512  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||| || ||||||| | |||||| ||||||||||||||||||||    
T  16554511 aaatcatgtcacgatttccctgttcttccagaccacaaatttgaag 16554466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 16631166 - 16631022
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    ||||||||||  |||||||||||||||| || | |||||||||| ||||||||||||| || || | ||||||||| | | | |||||||||||||  ||    
T  16631166 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctag-ctcacggcaccccgaaatcgtgtcacgatacca 16631068  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||| || ||||||| | |||||| ||||||||||||||||||||    
T  16631067 aaatcatgtcacgatttccctgttcttccagaccacaaatttgaag 16631022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 5266516 - 5266610
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgat 95  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| | |||||||||| ||| | |||||||||||||    
T  5266516 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcacctcgaaatcgtgtcacgat 5266610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 34166823 - 34166673
Alignment:
Q  1 agcaagtttctggatcgtgtcacgattt-cccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgc 98  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |||||||| |||||| ||||| | |  |||||||||||  | |||| ||||||||  |    
T  34166823 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgatacc 34166725  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaa 150  Q
    ||||||||| ||||||| | |||||| |||| ||||||||||||||| ||||    
T  34166724 aaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 34166673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 13151006 - 13150856
Alignment:
Q  1 agcaagtttctggatcgtgtcacgattt-cccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgc 98  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |||||||| |||||| ||||| | |  |||||||||||  | |||| ||||||||  |    
T  13151006 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgatacc 13150908  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaa 150  Q
    ||||||||| ||||||| | |||||| ||||  |||||||||||||| ||||    
T  13150907 aaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaa 13150856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 34164601 - 34164451
Alignment:
Q  1 agcaagtttctggatcgtgtcacgattt-cccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgc 98  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |||||||| |||||| ||||| | |  |||||||||||  | |||| ||||||||| |    
T  34164601 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgattt-gcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgatccc 34164503  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaa 150  Q
    | ||||||| ||||||| | |||||| ||||  |||||||||||||| ||||    
T  34164502 agaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaa 34164451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 14737222 - 14737159
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaact 64  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||| ||  ||||||||||    
T  14737222 agcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaact 14737159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 411829 - 411692
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||||||  |||||| |||||||| |||||||||| || | |||||||||| | | | || ||||||| ||  |||| ||||| ||||    
T  411829 atcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagac-tagctcacggcaccacgaaattgtgtcacaatgccaaattcgtgtcacg 411731  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| | || ||| |||||||||||||||||||| |||||    
T  411730 atttccctattcttccagaccacaaatttgaagacaaat 411692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 3073199 - 3073336
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    ||||||||||||||||| |  |||||| |||||||| |||||||| | ||   |||||||||||| | | |||||||||||||  |||| ||||| ||||    
T  3073199 atcgtgtcacgatttccaacaatcgtgtcacgatttggcaccctgtagac-cagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacg 3073297  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    |||   |||||| |||||||||||||||||||| |||||    
T  3073298 attttcctgttcttccagaccacaaatttgaagacaaat 3073336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 6097863 - 6097979
Alignment:
Q  35 atcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagacc 133  Q
    |||||| |||||||| |||||||||||||  | ||||||||||| | | |||||||||||||  |||| ||||| || |||| | |||||| |||| |||    
T  6097863 atcgtgtcacgatttagcaccctgcaaaccag-ctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcaggatttccctgttcttccaaacc 6097961  T
Q  134 acaaatttgaagccaaat 151  Q
    |||||||||||| |||||    
T  6097962 acaaatttgaagacaaat 6097979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 14737142 - 14737093
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  14737142 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 14737093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6026990 - 6026942
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattt 49  Q
    |||||||||||||||||||||||||||| || | |||||||||||||||    
T  6026990 agcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgattt 6026942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 23896813 - 23896950
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||| ||| ||||| |||||||||  ||||||||||||    ||||||  ||  || | ||||||||||||  |||||||||| ||||    
T  23896813 atcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaa-ctcacgatattacaaaatcgtgtcacgatgccaaaatcgtgtcacg 23896911  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    |||  ||||||| | || ||||||||||||||| |||||    
T  23896912 atttttctgttctttcaaaccacaaatttgaaggcaaat 23896950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 26253712 - 26253596
Alignment:
Q  35 atcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagacc 133  Q
    |||||| |||||||| ||||||||| ||||   ||||||| ||| || | || |||||||||  |||| ||||| ||||||| |||||||| | ||||||    
T  26253712 atcgtgtcacgatttggcaccctgctaactat-ctcacggtatcacaaaatcttgtcacgatgccaaattcgtgtcacgatttctctgttctttcagacc 26253614  T
Q  134 acaaatttgaagccaaat 151  Q
    |||||||||||| |||||    
T  26253613 acaaatttgaagacaaat 26253596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 17545607 - 17545654
Alignment:
Q  170 caaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  17545607 caaattctatggtacacccaacaatttgagtgtattggtacaccaaat 17545654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 28155130 - 28155087
Alignment:
Q  117 ctctgttcctccagaccacaaatttgaagccaaatacaacaaaa 160  Q
    |||||||| |||||||||||||||||||||||| | ||||||||    
T  28155130 ctctgttcttccagaccacaaatttgaagccaattccaacaaaa 28155087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 32834182 - 32834131
Alignment:
Q  166 taggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||||||| || |||| ||||||||||||||| |||||    
T  32834182 taggcaaattctatggtacacctaataatttgagtgtattggtacaccaaat 32834131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 26358961 - 26358911
Alignment:
Q  166 taggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaa 215  Q
    ||||||| |||||||||||||| ||||||| ||||||||||||||| ||||    
T  26358961 taggcaagttctatggtacacccaacaatttgagtgtattggtacaccaaa 26358911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 34151917 - 34151835
Alignment:
Q  68 ctcacggcatctcagatcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaa 150  Q
    |||||||||||  | |||| ||||||||| || ||||||| ||||||| | |||||| ||||  |||||||||||||| ||||    
T  34151917 ctcacggcatccgaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaa 34151835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 2258905 - 2258946
Alignment:
Q  170 caaattctatggtacacc-aacaattggagtgtattggtaca 210  Q
    |||||||||||||||||| ||||||| |||||||||||||||    
T  2258905 caaattctatggtacacccaacaatttgagtgtattggtaca 2258946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 5017026 - 5016977
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| |||||||  ||||||| |||| |||||||||||||||||||    
T  5017026 aaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaa 5016977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 5757095 - 5757046
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaac 63  Q
    |||||||||||||||| ||| ||||| |||||||||  ||||||||||||    
T  5757095 atcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaac 5757046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 10888216 - 10888167
Alignment:
Q  168 ggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    |||||||| ||||||||| ||||||||| ||||||| |||||||||||||    
T  10888216 ggcaaattatatggtacatccaacaatttgagtgtactggtacatcaaat 10888167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 31086003 - 31085954
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| || | |||||||||||||||||||    
T  31086003 aaatcgtgtcacgatttctctgttcttctaaaccacaaatttgaagccaa 31085954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 5266613 - 5266645
Alignment:
Q  117 ctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||||||||||||||||||||    
T  5266613 ctctgttcttccagaccacaaatttgaagccaa 5266645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 24212911 - 24212955
Alignment:
Q  167 aggcaaattctatggtaca-ccaacaattggagtgtattggtaca 210  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||    
T  24212911 aggcaaattctatggtacatccaaccatttgagtgtattggtaca 24212955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 2e-52; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 35745822 - 35745970
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||||||||| |||||||||||||| || |    
T  35745822 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccaacaaacttggctcacggcatctccgatcgtgtcacgattgcca 35745921  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||||||    
T  35745922 aatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 35745970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 39784479 - 39784333
Alignment:
Q  3 caagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaaaa 102  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||  |||||||||||||  |||||    
T  39784479 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcacctccaatcgtgtcacgattccaaaa 39784380  T
Q  103 tcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  39784379 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 39784333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 4759690 - 4759542
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||| ||  |||||||||| | ||||||||| ||| | |||||||||||||  ||    
T  4759690 agcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactag-ctcacggcacctcgaaatcgtgtcacgatgtca 4759592  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  4759591 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 4759542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 10683895 - 10683747
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatc-tcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| | |||||||||| | | | |||||||||||||  ||    
T  10683895 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcaccttgaaatcgtgtcacgatgcca 10683797  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  10683796 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 10683747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 18870177 - 18870029
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatc-tcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| | ||||||| |||| | | |||||||||||||  ||    
T  18870177 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacgacatcttgaaatcgtgtcacgatgcca 18870079  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  18870078 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 18870029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 30656126 - 30656274
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatc-tcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| | |||||||||| | | | |||||||||||||  ||    
T  30656126 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcaccttgaaatcgtgtcacgatgcca 30656224  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  30656225 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 30656274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 33037443 - 33037295
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||| ||  |||||||||| | ||||||||| ||| | |||||||||||||  ||    
T  33037443 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactag-ctcacggcacctcgaaatcgtgtcacgatgcca 33037345  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  33037344 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 33037295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 36979858 - 36980006
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||| ||  |||||||||| | ||||||||| ||| | |||||||||||||  ||    
T  36979858 agcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactag-ctcacggcacctcgaaatcgtgtcacgatgcca 36979956  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  36979957 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 36980006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 6311779 - 6311927
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatc-tcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| | |||||||||| | | | |||||||||||||  ||    
T  6311779 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcaccttgaaatcgtgtcacgatgcca 6311877  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| || |||| |||||||| ||||||||||||||||||||||||    
T  6311878 aaatcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaa 6311927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 18852783 - 18852635
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatc-tcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| | |||||||||| | | | |||||||||||||  ||    
T  18852783 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcaccttgaaatcgtgtcacgatgcca 18852685  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||  ||||||| |||||||| ||||||||||||||||||||||||    
T  18852684 aaatcgtatcacgatttctctgttcttccagaccacaaatttgaagccaa 18852635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 1261558 - 1261420
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||| | |||||||||||| | | |||||||||||||  |||| ||||| | ||    
T  1261558 atcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-tagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcgcg 1261460  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaata 152  Q
    ||| || ||||| |||| |||||||||||||| |||||||    
T  1261459 atttctgtgttcttccaaaccacaaatttgaaaccaaata 1261420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 3439243 - 3439100
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    ||||||||||  ||||||||||||||||||||| |||||| |||||||||||||||||||| || | ||||||||| | | | |||||||||||||  ||    
T  3439243 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaacctag-ctcacggcaccccgaaatcgtgtcacgatgcca 3439146  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
     ||||||| ||||||| |||||||| |||| |||||||||||||||    
T  3439145 caatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 3439100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 25327820 - 25327672
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcac-ggcatctcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||| ||  ||||||||| | |||||| | ||  | | |||||| |||||   ||    
T  25327820 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgatttggcgtcctgcaaac-tagctcacagccacttgaaatcgtgccacgaagcca 25327722  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  25327721 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 25327672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 2627462 - 2627325
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||||||| |||||| |||||||| ||||| |||||||  | ||||||| ||| | | |||||||||||||  |||| ||||| ||||    
T  2627462 atcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccatgcaaaccag-ctcacggaatcacgaaatcgtgtcacgatgccaaattcgtgtcacg 2627364  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| | |||||| ||||||||||||||||||||||||||    
T  2627363 atttccctgttcttccagaccacaaatttgaagccaaat 2627325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 145
Target Start/End: Original strand, 26288376 - 26288504
Alignment:
Q  17 gtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacgatt 115  Q
    |||||||||||||||||||| ||| |||||||| |||||||||||||   |||||||||||| | | ||| |||||||||  |||| ||||| |||||||    
T  26288376 gtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatt 26288474  T
Q  116 cctctgttcctccagaccacaaatttgaag 145  Q
     |||||||| ||||||||||||||||||||    
T  26288475 tctctgttcttccagaccacaaatttgaag 26288504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 145
Target Start/End: Original strand, 26301633 - 26301761
Alignment:
Q  17 gtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacgatt 115  Q
    |||||||||||||||||||| ||| |||||||| |||||||||||||   |||||||||||| | | ||| |||||||||  |||| ||||| |||||||    
T  26301633 gtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatt 26301731  T
Q  116 cctctgttcctccagaccacaaatttgaag 145  Q
     |||||||| ||||||||||||||||||||    
T  26301732 tctctgttcttccagaccacaaatttgaag 26301761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 145
Target Start/End: Original strand, 26313627 - 26313755
Alignment:
Q  17 gtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacgatt 115  Q
    |||||||||||||||||||| ||| |||||||| |||||||||||||   |||||||||||| | | ||| |||||||||  |||| ||||| |||||||    
T  26313627 gtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatt 26313725  T
Q  116 cctctgttcctccagaccacaaatttgaag 145  Q
     |||||||| ||||||||||||||||||||    
T  26313726 tctctgttcttccagaccacaaatttgaag 26313755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 7289584 - 7289439
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatc--tcagatcgtgtcacgatcgc 98  Q
    |||||||||||| ||||||||||||||| ||||||||||| |||||||| ||  ||||||||| | ||||| |||  |  | | |||||||||||||  |    
T  7289584 agcaagtttctgaatcgtgtcacgattttccaagatcgtgtcacgatttggcgtcctgcaaac-tagctcatggctcccttgaaatcgtgtcacgatgcc 7289486  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||||| ||| ||| |||||||| ||||||||||||||||||||    
T  7289485 aaaatcgtgtcactatttctctgttcttccagaccacaaatttgaag 7289439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 7412808 - 7412945
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||| ||| || || |||||||||  ||||||||||||  | ||||||||||  |||| ||||||||||||  |||||||||| ||||    
T  7412808 atcgtgtcacgatttcacaaaattgtaccacgatttgacaccctgcaaaccag-ctcacggcattacagaatcgtgtcacgatgccaaaatcgtgtcacg 7412906  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| |||| ||||||||||||||| |||||    
T  7412907 atttctctgttcttccaaaccacaaatttgaagtcaaat 7412945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 42575752 - 42575897
Alignment:
Q  1 agcaagtttctggatcgtgtcacgattt-cccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgc 98  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |||||||| |||||| ||||| | |  |||||||||||  | |||||||| ||||| |    
T  42575752 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgattt-gcacccctgcaaccctaactcacggcatccgaaatcgtgtcgcgatccc 42575850  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||||| ||||||| | |||||| |||| |||||||||||||||    
T  42575851 aaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 42575897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 15290300 - 15290155
Alignment:
Q  1 agcaagtttctggatcgtgtcacgattt-cccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgc 98  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |||||||| |||||| ||||| | |  |||||||||||  | |||||||| | ||| |    
T  15290300 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatccgaaatcgtgtcgcaatccc 15290202  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||||| ||||||| | |||||| |||| |||||||||||||||    
T  15290201 aaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 15290155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 15470669 - 15470524
Alignment:
Q  1 agcaagtttctggatcgtgtcacgattt-cccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgc 98  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |||||||| |||||| ||||| | |  |||||||||||  | |||||||| | ||| |    
T  15470669 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatccgaaatcgtgtcgcaatccc 15470571  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||||| ||||||| | |||||| |||| |||||||||||||||    
T  15470570 aaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 15470524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 10688755 - 10688692
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaact 64  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  10688755 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 10688692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 25689697 - 25689604
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgat 95  Q
    ||||||||||  |||||||| |||||||||||  ||||||||||||||||||||||||| ||| | |||||||||| |  | |||||||||||||    
T  25689697 agcaagtttcacgatcgtgtgacgatttcccacaatcgtgccacgattttgcaccctgc-aacctagctcacggcacccgaaatcgtgtcacgat 25689604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 31043031 - 31042915
Alignment:
Q  35 atcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagacc 133  Q
    |||||| |||||||| |||||||||||||  | ||||||||| | | | |||||||||||||  |||| ||||| ||||||| |||| ||| ||||||||    
T  31043031 atcgtgtcacgatttggcaccctgcaaaccag-ctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctattcttccagacc 31042933  T
Q  134 acaaatttgaagccaaat 151  Q
    |||||||||||| |||||    
T  31042932 acaaatttgaagtcaaat 31042915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 10688675 - 10688626
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  10688675 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 10688626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 29773443 - 29773494
Alignment:
Q  166 taggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  29773443 taggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaat 29773494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 19175283 - 19175225
Alignment:
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaatacaaca 157  Q
    |||||||||||||||||  ||||||| |||| ||| |||||||||||||||| ||||||    
T  19175283 aaaatcgtgacacgatttttctgttcttccaaaccgcaaatttgaagccaaaaacaaca 19175225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 5702009 - 5701960
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| |||| |||||||||||||||||||    
T  5702009 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 5701960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 25689618 - 25689573
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||    
T  25689618 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 25689573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 4456575 - 4456635
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagcc-aaatacaacaaa 159  Q
    |||||||| ||||||| || ||||| |||| ||||||||||||||||| ||||||||||||    
T  4456575 aaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaaaatacaacaaa 4456635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 14498711 - 14498660
Alignment:
Q  166 taggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    ||||||| |||||||||||||| ||||||| ||||||||||||||| |||||    
T  14498711 taggcaagttctatggtacacccaacaatttgagtgtattggtacaccaaat 14498660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 15726298 - 15726247
Alignment:
Q  166 taggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||||| |||| |||| ||||||||||||||| |||||    
T  15726298 taggcaaattctatggtacatccaataatttgagtgtattggtacaccaaat 15726247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 44934901 - 44934948
Alignment:
Q  170 caaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||||    
T  44934901 caaattctatggtacacccaacaatttgaatgtattggtacatcaaat 44934948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 23286564 - 23286614
Alignment:
Q  167 aggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    ||||||||||||||||||||| ||||||| | ||||||||||||| |||||    
T  23286564 aggcaaattctatggtacacctaacaatttgcgtgtattggtacaccaaat 23286614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 29229584 - 29229534
Alignment:
Q  167 aggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||| |||||    
T  29229584 aggcaaattctatggtacacccaaccatttgagtgtattggtacaccaaat 29229534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 37511087 - 37511137
Alignment:
Q  167 aggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||| |||||    
T  37511087 aggcaaattcgatggtacacccaacaatttgagtgtattggtacaccaaat 37511137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 945973 - 946025
Alignment:
Q  165 ataggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||| |||||| ||||| ||| ||||||||||||||| |||||    
T  945973 ataggcaaattctacggtacatccaaccatttgagtgtattggtacaccaaat 946025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 17096691 - 17096639
Alignment:
Q  164 aataggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaa 215  Q
    |||||||||||||||||||||| |||||| || |||||||| |||||| ||||    
T  17096691 aataggcaaattctatggtacacccaacattttgagtgtatcggtacaccaaa 17096639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 45347473 - 45347325
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||  |||||||||||||  |||    
T  45347473 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcatctctaatcgtgtcacgattccaa 45347374  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||||| ||||||| || ||||| ||||||||||||||||||||||||    
T  45347373 aatcgtgtcacgatttctttgttcttccagaccacaaatttgaagccaa 45347325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 18856153 - 18856301
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||| |||  |||||||||||||  |||    
T  18856153 agcaagtttctgaatcgtgtcacgatttcccaagatcttgccacgattttgcatccagcaaacttggctcacggcacctccaatcgtgtcacgattccaa 18856252  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  18856253 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 18856301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 24742421 - 24742569
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| | |||||||||| ||| | |||||||||||||  ||    
T  24742421 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcacctcgaaatcgtgtcacgatgcca 24742519  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  24742520 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 24742569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 9224055 - 9223907
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacgg-catctcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| | |||||||| ||  | | |||||||||||||  ||    
T  9224055 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggccacttgaaatcgtgtcacgatgcca 9223957  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  9223956 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9223907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 45356954 - 45356861
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacga 94  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||    
T  45356954 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcatctcaaatcgtgtcacga 45356861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 7122423 - 7122274
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgca 99  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||| |||||| ||||| | | ||||||||||||  | |||||||||||||| ||    
T  7122423 agcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatccca 7122325  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaa 150  Q
    |||||||| ||||||| | |||||| |||| ||||||||||||||| ||||    
T  7122324 aaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaaa 7122274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 7124645 - 7124496
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgca 99  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||| |||||| ||||| | | ||||||||||||  | |||||||||||||| ||    
T  7124645 agcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatccca 7124547  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaa 150  Q
    |||||||| ||||||| | |||||| |||| ||||||||||||||| ||||    
T  7124546 aaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaaa 7124496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 56141668 - 56141519
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttg-caccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgc 98  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| |  |||||||||| | |||||| |  ||| | |||||||||||||  |    
T  56141668 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttggcgtcctgcaaactag-ctcacgacccctccaaatcgtgtcacgatgcc 56141570  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  56141569 aaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 56141519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 5733090 - 5733239
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||| ||  ||||||||||||  |||||||| | | | |||||||||||||  ||    
T  5733090 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttcacggcaccacgaaatcgtgtcacgatgcca 5733189  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| || |||| |||||||| | ||||||||||||||||||||||    
T  5733190 aaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaa 5733239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 9228842 - 9228694
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  |||||||||  | ||||||||  ||  | |||||||||||||  ||    
T  9228842 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacgag-ctcacggccacttgaaatcgtgtcacgatgcca 9228744  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  9228743 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9228694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 39 - 160
Target Start/End: Original strand, 18860403 - 18860524
Alignment:
Q  39 tgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagaccacaaa 138  Q
    ||||||||||||||| || ||||||||||||||||||| |||  |||||||||||||  |||||||||| ||||||| |||||||| |||||||||||||    
T  18860403 tgccacgattttgcatccagcaaacttggctcacggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaa 18860502  T
Q  139 tttgaagccaaatacaacaaaa 160  Q
    ||||||||||| | ||||||||    
T  18860503 tttgaagccaatttcaacaaaa 18860524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 51520894 - 51521042
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||| ||  |||||||||| | ||||||||  ||  | |||||||||||||  ||    
T  51520894 agcaagtttctgaatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaactag-ctcacggccccttgaaatcgtgtcacgatgcca 51520992  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  51520993 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 51521042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 8393138 - 8392994
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgca 99  Q
    |||||||||||||||||||||||||||| || | ||||||||||||||| |||||| ||||| | | ||||||||||||  | |||||||||||||  ||    
T  8393138 agcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatacca 8393040  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||| ||||||| | |||||| ||||||||||||||||||||    
T  8393039 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 8392994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 13992735 - 13992872
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||||||| |||||| |||||||| |||||||||||||  | |||||| |||| | | |||||||||||||  |||| ||||| ||||    
T  13992735 atcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccag-ctcacgacatcacgaaatcgtgtcacgatgccaaattcgtgtcacg 13992833  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| ||||||||||||||||||||||||||    
T  13992834 atttctctgttcttccagaccacaaatttgaagccaaat 13992872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 28468121 - 28467984
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    ||||||||||||||| ||||||||||| |||||||| |||||||||||||   |||||||||||| | | ||||||| |||||  |||| ||||| ||||    
T  28468121 atcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacaaaatcgtgttacgatgccaaattcgtgtcacg 28468023  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| |||| |||||||||||||||||||||    
T  28468022 atttctctgttcttccataccacaaatttgaagccaaat 28467984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 3814450 - 3814597
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacgg-catctcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||| |||||| |||||||| ||  | |||||||||| || |||| ||  | | |||||||||||||  ||    
T  3814450 agcaagtttctgaatcgtgtcacgatttcccaa-atcgtgacacgatttggcgtcttgcaaacttg-cttacggtcacttgaaatcgtgtcacgatgcca 3814547  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  3814548 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 3814597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 8395347 - 8395203
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgca 99  Q
    ||||||||||||||| |||||||||||| || | ||||||| ||||||| |||||| ||||| | | ||||||||||||  | |||||||||||||  ||    
T  8395347 agcaagtttctggattgtgtcacgattttcccaaatcgtgctacgattt-gcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatacca 8395249  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||| ||||||| | |||||| ||||||||||||||||||||    
T  8395248 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 8395203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 31495758 - 31495895
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||||||  |||||| |||||||| |||||||||||||  | ||||||||||| | | |||||||||||||  |||| ||||| ||||    
T  31495758 atcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccag-ctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacg 31495856  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| | |||||| |||||||||||||||||||| |||||    
T  31495857 atttccctgttcttccagaccacaaatttgaagacaaat 31495895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 18712411 - 18712297
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacgg-catctcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| | |||||||| ||  | | |||||||||||||  ||    
T  18712411 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggccacttgaaatcgtgtcacgatgcca 18712313  T
Q  100 aaatcgtgacacgatt 115  Q
    |||||||| |||||||    
T  18712312 aaatcgtgtcacgatt 18712297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 29761102 - 29761196
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgat 95  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| | |||||||||| ||| | |||||||||||||    
T  29761102 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcacctcgaaatcgtgtcacgat 29761196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 5135806 - 5135661
Alignment:
Q  1 agcaagtttctggatcgtgtcacgattt-cccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgc 98  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |||||||| |||||| ||||| | |  |||||||||||  | |||| ||||||||  |    
T  5135806 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgattt-gcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgatacc 5135708  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||||| ||||||| | |||||| ||||  ||||||||||||||    
T  5135707 aaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 5135661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 5138032 - 5137887
Alignment:
Q  1 agcaagtttctggatcgtgtcacgattt-cccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgc 98  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |||||||| |||||| ||||| | |  |||||||||||  | |||| ||||||||  |    
T  5138032 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgattt-gcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgatacc 5137934  T
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||||| ||||||| | |||||| ||||  ||||||||||||||    
T  5137933 aaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 5137887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 31985250 - 31985134
Alignment:
Q  35 atcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagacc 133  Q
    |||||| |||||||| ||||||||| |||| | ||||||| ||| || | ||||||||||||  |||| ||||| ||||||| |||||||| | |||| |    
T  31985250 atcgtgtcacgatttggcaccctgctaactag-ctcacggtatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagatc 31985152  T
Q  134 acaaatttgaagccaaat 151  Q
    ||||||||||||||||||    
T  31985151 acaaatttgaagccaaat 31985134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 5143806 - 5143858
Alignment:
Q  97 gcaaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||||||||| ||||||| |||||||| |||| |||||||||||||||||||    
T  5143806 gcaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 5143858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 5148158 - 5148293
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    ||||||||| | |||| ||| ||||||||||||||   ||||||||||||| | |||||| |||  || | |||||||||| |   ||||||||| ||||    
T  5148158 atcgtgtcaagttttcacaaaatcgtgccacgattggtcaccctgcaaactag-ctcacgacattgcaaaatcgtgtcacggtgataaaatcgtgtcacg 5148256  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||| |||| ||| |||| |||||||||||||||||||    
T  5148257 atttctctattcttccaaaccacaaatttgaagccaa 5148293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 8689096 - 8689045
Alignment:
Q  98 caaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||||| ||||||| |||||||| |||| |||||||||||||||||||    
T  8689096 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 8689045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 38151968 - 38151909
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa-atacaacaa 158  Q
    |||||||| ||||||| |||||||| |||| ||||||||||||||||||| |||||||||    
T  38151968 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaacaa 38151909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 16628403 - 16628345
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa-atacaaca 157  Q
    |||||||| ||||||| |||||||| |||| ||||||||||||||||||| ||||||||    
T  16628403 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaaca 16628345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 3778116 - 3778173
Alignment:
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa-atacaaca 157  Q
    ||||||| ||||||| |||||||| |||| ||||||||||||||||||| ||||||||    
T  3778116 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaaca 3778173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 41760067 - 41760018
Alignment:
Q  168 ggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  41760067 ggcaaattctatggtacatccaacaatttgagtgtattggtacaccaaat 41760018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 51436220 - 51436171
Alignment:
Q  168 ggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  51436220 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaat 51436171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 14802710 - 14802761
Alignment:
Q  166 taggcaaattctatggtacac-caacaattggagtgtattggtacatcaaat 216  Q
    ||||||||||||||||||||| |||||||| |||||||||| |||| |||||    
T  14802710 taggcaaattctatggtacactcaacaatttgagtgtattgatacaccaaat 14802761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 38835854 - 38835901
Alignment:
Q  170 caaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||| || |||| |||||||||||||||||||||    
T  38835854 caaattctatggtacacctaataatttgagtgtattggtacatcaaat 38835901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 5268750 - 5268700
Alignment:
Q  99 aaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||| || ||||||| |||||||| |||| |||||||||||||||||||    
T  5268750 aaaatcctgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 5268700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 16622824 - 16622766
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa-atacaaca 157  Q
    |||||||| ||||||| |||||||| |||| ||||||||||| ||||||| ||||||||    
T  16622824 aaatcgtgtcacgatttctctgttcttccaaaccacaaattttaagccaatatacaaca 16622766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 34280636 - 34280586
Alignment:
Q  167 aggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||| |||||    
T  34280636 aggcaagttctatggtacacccaacaatttgagtgtattggtacaccaaat 34280586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 47302028 - 47302078
Alignment:
Q  167 aggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    ||||||||| |||||| |||| ||||||| |||||||||||||||||||||    
T  47302028 aggcaaattttatggtgcacctaacaatttgagtgtattggtacatcaaat 47302078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 3716325 - 3716374
Alignment:
Q  168 ggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||| |||| |||| ||||||||||||||| |||||    
T  3716325 ggcaaattctatggtacatccaataatttgagtgtattggtacaccaaat 3716374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 3778029 - 3778078
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaac 63  Q
    ||||||||||| |||||||| |||||| |||||||  |||||||||||||    
T  3778029 atcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaac 3778078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 6742946 - 6742897
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| |||| |||| ||||||||||||||    
T  6742946 aaatcgtgtcacgatttctctgttcttccaaaccataaatttgaagccaa 6742897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 10047932 - 10047981
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| |||||||  ||||||| |||| |||||||||||||||||||    
T  10047932 aaatcgtgtcacgatttatctgttcttccaaaccacaaatttgaagccaa 10047981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 27538915 - 27538964
Alignment:
Q  168 ggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    ||||| |||||||||||||| ||||||| ||||||||||||||| |||||    
T  27538915 ggcaagttctatggtacacccaacaatttgagtgtattggtacaccaaat 27538964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 28037685 - 28037734
Alignment:
Q  168 ggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    ||||||||||||||| |||| ||||||| ||||||||||||||| |||||    
T  28037685 ggcaaattctatggtgcacccaacaatttgagtgtattggtacaccaaat 28037734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 52809352 - 52809307
Alignment:
Q  166 taggcaaattctatggtaca-ccaacaattggagtgtattggtaca 210  Q
    ||||||||| |||||||||| ||||||||| |||||||||||||||    
T  52809352 taggcaaatactatggtacatccaacaatttgagtgtattggtaca 52809307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 16628488 - 16628440
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaa 62  Q
    ||||||||||| |||||||| |||||| |||||||  ||||||||||||    
T  16628488 atcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaa 16628440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 789 - 947
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||  |||||||||||||  |||    
T  789 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcacctccaatcgtgtcacgattccaa 888  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaatacaacaaa 159  Q
    ||||||| ||||||| |||||||| |||| ||||||||||||||||||| | |||||||    
T  889 aatcgtgtcacgatttctctgttcttccataccacaaatttgaagccaatttcaacaaa 947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 4e-50; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 19344853 - 19345001
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||  || ||||||||||||||||||||||| |||||| ||||||| || |    
T  19344853 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgattttgcttccagcaaacttggctcacggcatctccgatcgtatcacgattgcca 19344952  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||||||    
T  19344953 aatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaa 19345001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 19349713 - 19349859
Alignment:
Q  3 caagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaaaa 102  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||||| || |||    
T  19349713 caagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgccaaa 19349812  T
Q  103 tcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    | | |||||||||||||||||| |||| |||||||||||||| ||||    
T  19349813 ttgcgacacgattcctctgttcttccaaaccacaaatttgaaaccaa 19349859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 14291969 - 14292117
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  |||||||||| | ||||||||| ||| |||||||||||||||  ||    
T  14291969 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactag-ctcacggcacctcgagatcgtgtcacgatgcca 14292067  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  14292068 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 14292117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 9296018 - 9295870
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatc-tcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||| | |||||||||| | | | |||||||||||||  ||    
T  9296018 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaac-tagctcacggcaccttgaaatcgtgtcacgatgcca 9295920  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  9295919 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9295870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 149
Target Start/End: Original strand, 32247230 - 32247344
Alignment:
Q  35 atcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagacca 134  Q
    ||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||  |||||||||| ||||||| |||||||| |||||||||    
T  32247230 atcgtgccacgattttgcatccagcaaacttggctcacggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagacca 32247329  T
Q  135 caaatttgaagccaa 149  Q
    |||||||||||||||    
T  32247330 caaatttgaagccaa 32247344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 39811633 - 39811485
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacgg-catctcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||||| ||| |||| ||  | | |||||||||||||  ||    
T  39811633 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactt-gcttacggtcacttgaaatcgtgtcacgatgcca 39811535  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  39811534 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 39811485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 11098543 - 11098395
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatc-tcagatcgtgtcacgatcgca 99  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||| ||  ||||||||| | |||||||||| | | | |||||||||| ||  ||    
T  11098543 agcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggcaccttgaaatcgtgtcactatgcca 11098445  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  11098444 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 11098395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 12647811 - 12647955
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgca 99  Q
    ||||||||| ||||||||||||||||||||||  ||||||||||||||| |||||| ||||| | | ||||||||||||  | |||||||||||||| ||    
T  12647811 agcaagtttatggatcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatccca 12647909  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||| ||||||| | |||||| ||||||||||||||||||||    
T  12647910 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 12647955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 3492220 - 3492370
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgca 99  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||||| |||||||||||||   |||||||||||| | | |||||||||||||  ||    
T  3492220 agcaagtttcagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacaaaatcgtgtcacgatgcca 3492318  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    || ||||| ||| ||| |||||||| | ||||||||||||||||||||||||    
T  3492319 aattcgtgtcacaatttctctgttctttcagaccacaaatttgaagccaaat 3492370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 30833065 - 30832928
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||   |||||||||||| | | |||||||||||||  |||| || || ||||    
T  30833065 atcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacgaaatcgtgtcacgatgtcaaattcatgtcacg 30832967  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| ||||||||||||||||||||||||||    
T  30832966 atttctctgttcttccagaccacaaatttgaagccaaat 30832928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 25410122 - 25410258
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||    ||||||||||| || | ||||||||||||  |||| ||||| ||||    
T  25410122 atcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccat-ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacg 25410220  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaa 150  Q
    ||| |||||||| |||||||||||||||||||||||||    
T  25410221 atttctctgttcttccagaccacaaatttgaagccaaa 25410258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 32289292 - 32289155
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||| | |||||||||| || ||||| |||||||||||||  | ||||||||||| || | ||||||||||||  |||| ||||| ||||    
T  32289292 atcgtgtcacgattcctcaagatcgtgtcaagatttggcaccctgcaaaccag-ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacg 32289194  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| ||||||||||||||||||||||||||    
T  32289193 atttctctgttcttccagaccacaaatttgaagccaaat 32289155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 4484779 - 4484910
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatc-tcagatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||| |  ||||||||| |||||||| |||||||||||||| | ||||||||||| | | |||||||||||||  |||| ||||| ||||    
T  4484779 atcgtgtcacgattccttaagatcgtgtcacgatttggcaccctgcaaactag-ctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacg 4484877  T
Q  113 attcctctgttcctccagaccacaaatttgaag 145  Q
    ||| |||||||| ||||||||||||||||||||    
T  4484878 atttctctgttcttccagaccacaaatttgaag 4484910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 151
Target Start/End: Original strand, 40739316 - 40739450
Alignment:
Q  17 gtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacgatt 115  Q
    ||||||| ||| | |||||||||| |||||||| |||||||||||||   |||||||||||  | | |||||||||||||  |||| ||||| |||||||    
T  40739316 gtgtcacaattccacaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggcataacaaaatcgtgtcacgatgccaaattcgtgtcacgatt 40739414  T
Q  116 cctctgttcctccagaccacaaatttgaagccaaat 151  Q
      ||||||| ||||||||||||||||||||||||||    
T  40739415 tgtctgttcttccagaccacaaatttgaagccaaat 40739450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 6266418 - 6266281
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||||||  |||||| |||||||| |||||||||||||   |||||||||||| | | || ||||||||||  |||| ||||| ||||    
T  6266418 atcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacgaaattgtgtcacgatgtcaaattcgtgtcacg 6266320  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |  ||||| |||||||||||||||||||| |||||    
T  6266319 atttccatgttcttccagaccacaaatttgaagacaaat 6266281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 44310545 - 44310479
Alignment:
Q  83 atcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||||||||  |||||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  44310545 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 44310479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 4674010 - 4673959
Alignment:
Q  166 taggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  4674010 taggcaaattctatggtacatccaacaatttgagtgtattggtacaccaaat 4673959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 8389681 - 8389632
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| |||| |||||||||||||||||||    
T  8389681 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 8389632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 28258729 - 28258676
Alignment:
Q  98 caaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    |||||||||| ||||||| |||||||  |||| |||||||||||||||||||||    
T  28258729 caaaatcgtgtcacgatttctctgtttttccaaaccacaaatttgaagccaaat 28258676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 42046076 - 42046124
Alignment:
Q  169 gcaaattctatggtacac-caacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||| |||||||| ||||||||||||||| |||||    
T  42046076 gcaaattctatggtacactcaacaatttgagtgtattggtacaccaaat 42046124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 6884161 - 6884208
Alignment:
Q  170 caaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  6884161 caaattctatggtacacccaacaatttgagtgtattggtacaccaaat 6884208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 11813605 - 11813554
Alignment:
Q  166 taggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  11813605 taggaaaattctatggtacacccaacaatttgagtgtattggtacaccaaat 11813554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 36757477 - 36757426
Alignment:
Q  98 caaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||||| |||||||  ||||||| |||| |||||||||||||||||||    
T  36757477 caaaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaa 36757426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 58919 - 58969
Alignment:
Q  167 aggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    ||||||| ||||||||||||| || |||| |||||||||||||||||||||    
T  58919 aggcaaaatctatggtacacccaataatttgagtgtattggtacatcaaat 58969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 10706783 - 10706725
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa-atacaaca 157  Q
    |||||||| ||||||| |||||||| |||| || |||||||||||||||| ||||||||    
T  10706783 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaatatacaaca 10706725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 38963471 - 38963421
Alignment:
Q  167 aggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    ||||||||| ||||||||| ||||||||| || ||||||||||||||||||    
T  38963471 aggcaaattgtatggtacatccaacaatttgaatgtattggtacatcaaat 38963421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 5091997 - 5092046
Alignment:
Q  168 ggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||| | ||||||| ||||||||||||||| |||||    
T  5091997 ggcaaattctatggtacatctaacaatttgagtgtattggtacaccaaat 5092046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 11227627 - 11227676
Alignment:
Q  168 ggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    |||||||||||||||||| |||| |||| ||||||||||||||| |||||    
T  11227627 ggcaaattctatggtacatccaataatttgagtgtattggtacaccaaat 11227676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 21630511 - 21630560
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| |||| || ||||||||||||||||    
T  21630511 aaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaa 21630560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 28258794 - 28258745
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaac 63  Q
    |||||||||||||||| ||| || ||||||||||||  ||||||||||||    
T  28258794 atcgtgtcacgatttcacaaaattgtgccacgatttgacaccctgcaaac 28258745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 33528155 - 33528106
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||| ||| ||||||| |||||||| |||| |||||||||||||||||||    
T  33528155 aaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 33528106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 33528240 - 33528191
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaac 63  Q
    ||||||||||| |||||||| |||||| |||||||  |||||||||||||    
T  33528240 atcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaac 33528191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 39483443 - 39483492
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||| ||| |||||||| |||| |||||||||||||||||||    
T  39483443 aaatcgtgtcacaatttctctgttcttccaaaccacaaatttgaagccaa 39483492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 1353504 - 1353556
Alignment:
Q  165 ataggcaaattctatggtaca-ccaacaattggagtgtattggtacatcaaat 216  Q
    ||||||||||||||||||||| |||| |||  ||||||||||||||| |||||    
T  1353504 ataggcaaattctatggtacacccaataatatgagtgtattggtacaccaaat 1353556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 5389605 - 5389557
Alignment:
Q  170 caaattctatggtaca-ccaacaattggagtgtattggtacatcaaata 217  Q
    |||||||||||||||| ||| ||||| ||||||||||||||| ||||||    
T  5389605 caaattctatggtacatccaccaatttgagtgtattggtacaccaaata 5389557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 20522797 - 20522837
Alignment:
Q  109 cacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||||| |||||||| |||| |||||||||||||||||||    
T  20522797 cacgatttctctgttcttccaaaccacaaatttgaagccaa 20522837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 34665568 - 34665620
Alignment:
Q  165 ataggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaat 216  Q
    |||| |||||||||||||| ||| ||||||| ||||||||||||||| |||||    
T  34665568 atagacaaattctatggtatacccaacaatttgagtgtattggtacaccaaat 34665620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 1895 - 1751
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||||| || || | |||||||||||||| || |    
T  1895 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctccccgatcgtgtcacgattgcca 1796  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||    
T  1795 aatcgtgacacgattcctctgttcttccaaaccactaatttgaag 1751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 148600 - 148456
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||||| || || | |||||||||||||| || |    
T  148600 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctccccgatcgtgtcacgattgcca 148501  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||    
T  148500 aatcgtgacacgattcctctgttcttccaaaccactaatttgaag 148456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 18820 - 18672
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||  || |||||||| |||||| || |||| |||||||||||||| || |    
T  18820 agcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgcca 18721  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||| ||||||||||||||||||  ||| |||||||||||||||||||    
T  18720 aatcgcgacacgattcctctgttctcccaaaccacaaatttgaagccaa 18672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 13940 - 13796
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||  || |||||||| |||||| || || | |||||||||||||  ||||    
T  13940 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctccctgatcgtgtcacgactgcaa 13841  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||||||||||||||||||||  ||| ||||| |||||||||    
T  13840 aatcgtgacacgattcctctgttctcccaaaccactaatttgaag 13796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 176606 - 176462
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgcaa 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||  || |||||||| |||||| || || | |||||||||||||  ||||    
T  176606 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctccctgatcgtgtcacgactgcaa 176507  T
Q  101 aatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    ||||||||||||||||||||||||  ||| ||||| |||||||||    
T  176506 aatcgtgacacgattcctctgttctcccaaaccactaatttgaag 176462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 3029 - 3173
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgca 99  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||| |||||| ||||| | | ||||||||||||  | |||||||||||||| ||    
T  3029 agcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatccca 3127  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||| ||||||| | |||||| ||||||||||||||||||||    
T  3128 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 3173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 4154 - 4298
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccc-tgcaaacttggctcacggcatctcagatcgtgtcacgatcgca 99  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||| |||||| ||||| | | |||||||||| || | |||||||||||||  ||    
T  4154 agcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaaccctagctcacggcacctaaaatcgtgtcacgattcca 4252  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||| ||||||| | |||||| ||||||||||||||||||||    
T  4253 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 4298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 17571 - 17438
Alignment:
Q  18 tgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacgattc 116  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||  | ||||||||||| | | |||||||||||||  |||| ||||| |||||||     
T  17571 tgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccag-ctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgattt 17473  T
Q  117 ctctgttcctccagaccacaaatttgaagccaaat 151  Q
    |||||||| ||||||||||||||||||||||||||    
T  17472 ctctgttcttccagaccacaaatttgaagccaaat 17438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 3493 - 3345
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacgg-catctcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||| ||||| | |||||||| ||  | | |||||||||||||  ||    
T  3493 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtccttcaaac-tagctcacggccacttgaaatcgtgtcacgatgtca 3395  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||| ||| ||||||||||||||||||||||||    
T  3394 aaatcgtgtcacgatttctcttttcttccagaccacaaatttgaagccaa 3345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 9165 - 9301
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||||||| ||| || |||||||| |||||||||||||  | ||||||||||| | | |||||||||||||  |||| ||||| ||||    
T  9165 atcgtgtcacgatttcccaa-atcatgtcacgatttggcaccctgcaaaccag-ctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacg 9262  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| ||||||||||||||||||||||||||    
T  9263 atttctctgttcttccagaccacaaatttgaagccaaat 9301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 11610 - 11746
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatc-tcagatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||||||| |||||| |||||||| |||||||||||||  | ||||||||||| | | |||||||||||||  |||| ||||| ||||    
T  11610 atcgtgtcacgatttcccaa-atcgtgtcacgatttggcaccctgcaaaccag-ctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacg 11707  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| |||||||||||| |||||||||||||    
T  11708 atttctctgttcttccagaccacaattttgaagccaaat 11746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 22083 - 21946
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    ||||||||||||||||||||||||||| |||||||| ||  ||||||||| | |||||||||| ||| | |||||||||||||  |||| || || | ||    
T  22083 atcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaac-tagctcacggcacctcgaaatcgtgtcacgatgccaaattcatgtcccg 21985  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    ||| |||||||| ||||||||||||||||||| ||||||    
T  21984 atttctctgttcttccagaccacaaatttgaaaccaaat 21946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 6016 - 5871
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttc-ccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgatcgca 99  Q
    ||||||||||  ||||||||||||||||  |||  |||||| ||||| |||||||||||||| | | |||||||||| |||  ||||||||||||   ||    
T  6016 agcaagtttcacgatcgtgtcacgattttgccacaatcgtgacacgaatttgcaccctgcaaccctagctcacggcacctccaatcgtgtcacgactcca 5917  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaag 145  Q
    |||||||| ||||||| | |||||| ||||||||||||||||||||    
T  5916 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 5871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 34710 - 34562
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacgg-catctcagatcgtgtcacgatcgca 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||  | |||||||    || |||| ||  | | || ||||||||||  ||    
T  34710 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcatgcaaac-aaactaacggccacttgaaatagtgtcacgatgcca 34612  T
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  34611 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 34562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 1783 - 1717
Alignment:
Q  83 atcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||||||||  |||||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  1783 atcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 1717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 8034 - 7918
Alignment:
Q  35 atcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacgattcctctgttcctccagacc 133  Q
    |||||| |||||||| |||||||||||||    ||||||||||| || | ||||||||||||  |||| ||||| ||||||| |||||||| | ||||||    
T  8034 atcgtgtcacgatttggcaccctgcaaaccaa-ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagacc 7936  T
Q  134 acaaatttgaagccaaat 151  Q
    ||||||||||||||||||    
T  7935 acaaatttgaagccaaat 7918  T

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Target: scaffold1519 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 626 - 519
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||| | |||||||||| |||||||| ||||||||||||| | |||||||||||| | | |||||||||||||  |||| ||||| ||||    
T  626 atcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaac-tagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacg 528  T
Q  113 attcctctg 121  Q
    ||| |||||    
T  527 atttctctg 519  T

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Target: scaffold0665 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 8136 - 8199
Alignment:
Q  1 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaact 64  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||| ||  ||||||||||    
T  8136 agcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaact 8199  T

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Target: scaffold0665; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 8216 - 8265
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  8216 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 8265  T

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Target: scaffold0510 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 1227 - 1090
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacg 112  Q
    |||||||||||||||| ||| ||||| |||||||||  ||||||||||||    ||||||  ||  || | ||||||||||||  |||||||||| ||||    
T  1227 atcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaa-ctcacgatattacaaaatcgtgtcacgatgccaaaatcgtgtcacg 1129  T
Q  113 attcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    |||  ||||||| | || ||||||||||||||| |||||    
T  1128 atttttctgttctttcaaaccacaaatttgaaggcaaat 1090  T

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Target: scaffold0087 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 43574 - 43441
Alignment:
Q  18 tgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacgattc 116  Q
    |||||||||||| ||| ||||| |||||||||  ||||||| ||||  | |||||| |||  || | ||||||||||||  || ||||||| |||||||     
T  43574 tgtcacgatttcacaaaatcgtaccacgatttgacaccctgtaaaccag-ctcacgacattacaaaatcgtgtcacgatgccacaatcgtgtcacgattt 43476  T
Q  117 ctctgttcctccagaccacaaatttgaagccaaat 151  Q
    |||| ||| |||| |||| ||||||||||||||||    
T  43475 ctctattcttccaaaccataaatttgaagccaaat 43441  T

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Target: scaffold0006 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 132892 - 132759
Alignment:
Q  18 tgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctcaga-tcgtgtcacgatcgcaaaatcgtgacacgattc 116  Q
    |||||||||| | ||| |||||| ||||||||  ||| ||||||||  | |||||| |||| || | ||||| ||||||  || ||||||| |||||||     
T  132892 tgtcacgattccacaaaatcgtgtcacgatttgacacactgcaaaccag-ctcacgacatcacaaaatcgtgccacgataccacaatcgtgtcacgattt 132794  T
Q  117 ctctgttcctccagaccacaaatttgaagccaaat 151  Q
    |||||||| |||| ||||||||||||||| |||||    
T  132793 ctctgttcttccaaaccacaaatttgaagacaaat 132759  T

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Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 6252 - 6301
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| ||||||| |||||||| |||| |||||||||||||||||||    
T  6252 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 6301  T

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Target: scaffold0006; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 3060 - 3109
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    |||||||| || |||| |||||||| |||| |||||||||||||||||||    
T  3060 aaatcgtgtcatgatttctctgttcttccaaaccacaaatttgaagccaa 3109  T

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Target: scaffold0006; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 149601 - 149650
Alignment:
Q  100 aaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaa 149  Q
    ||||| || ||||||| ||||||| ||||| |||||||||||||||||||    
T  149601 aaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaa 149650  T

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Target: scaffold0098 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 45744 - 45797
Alignment:
Q  98 caaaatcgtgacacgattcctctgttcctccagaccacaaatttgaagccaaat 151  Q
    |||||| ||| ||||||| |||||||| |||| |||||||||||||||||||||    
T  45744 caaaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaat 45797  T

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Target: scaffold0098; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 45679 - 45727
Alignment:
Q  14 atcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaa 62  Q
    |||||||||||||||| ||  |||||||||||||||  |||||||||||    
T  45679 atcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaa 45727  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 37017 - 36966
Alignment:
Q  166 taggcaaattctatggtacac-caacaattggagtgtattggtacatcaaat 216  Q
    ||||||||||||||||||||| |||||||| |||||||||| |||| |||||    
T  37017 taggcaaattctatggtacactcaacaatttgagtgtattgatacaccaaat 36966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 6669 - 6615
Alignment:
Q  168 ggcaaattctatggtacacc-aacaattggagtgtattggtacatcaaataaata 221  Q
    |||||||||||||||||||| || |||| ||||||||||||||| ||||| ||||    
T  6669 ggcaaattctatggtacaccaaaaaatttgagtgtattggtacaccaaatcaata 6615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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