View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20227_high_10 (Length: 225)

Name: NF20227_high_10
Description: NF20227
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20227_high_10
NF20227_high_10
[»] scaffold0390 (2 HSPs)
scaffold0390 (1-208)||(11891-12098)
scaffold0390 (13-72)||(12087-12154)
[»] chr4 (10 HSPs)
chr4 (1-208)||(26965512-26965719)
chr4 (1-208)||(5709375-5709582)
chr4 (1-208)||(19924663-19924870)
chr4 (1-208)||(10626244-10626451)
chr4 (1-208)||(18264141-18264350)
chr4 (13-72)||(19924859-19924926)
chr4 (13-71)||(26965457-26965523)
chr4 (13-72)||(18264085-18264152)
chr4 (13-71)||(5709320-5709386)
chr4 (13-72)||(10626440-10626507)
[»] chr3 (4 HSPs)
chr3 (1-208)||(13243683-13243890)
chr3 (1-208)||(10577400-10577607)
chr3 (13-49)||(13243658-13243694)
chr3 (13-72)||(10577596-10577663)
[»] chr6 (9 HSPs)
chr6 (1-200)||(29310949-29311148)
chr6 (1-208)||(17689433-17689640)
chr6 (1-208)||(27298666-27298873)
chr6 (1-191)||(27273807-27273997)
chr6 (1-185)||(28174150-28174342)
chr6 (13-71)||(17689629-17689695)
chr6 (13-71)||(27298611-27298677)
chr6 (13-71)||(29310886-29310952)
chr6 (20-72)||(28174079-28174131)
[»] scaffold0203 (2 HSPs)
scaffold0203 (1-208)||(28185-28392)
scaffold0203 (7-72)||(28375-28448)
[»] scaffold0234 (3 HSPs)
scaffold0234 (1-208)||(9282-9491)
scaffold0234 (1-76)||(16134-16209)
scaffold0234 (13-72)||(9480-9547)
[»] chr5 (3 HSPs)
chr5 (1-208)||(19712165-19712372)
chr5 (114-202)||(33130770-33130858)
chr5 (13-72)||(19712361-19712428)
[»] scaffold0657 (2 HSPs)
scaffold0657 (1-208)||(4748-4955)
scaffold0657 (13-72)||(4692-4759)
[»] chr7 (2 HSPs)
chr7 (1-208)||(11540982-11541191)
chr7 (13-72)||(11541180-11541247)
[»] scaffold1679 (2 HSPs)
scaffold1679 (1-202)||(619-820)
scaffold1679 (13-72)||(557-624)
[»] chr1 (2 HSPs)
chr1 (1-200)||(18254023-18254224)
chr1 (13-71)||(18253960-18254026)
[»] chr8 (2 HSPs)
chr8 (1-200)||(24637688-24637887)
chr8 (1-139)||(22107898-22108036)
[»] scaffold0008 (2 HSPs)
scaffold0008 (4-208)||(228407-228611)
scaffold0008 (9-49)||(228596-228636)
[»] chr2 (1 HSPs)
chr2 (111-200)||(25497925-25498014)


Alignment Details
Target: scaffold0390 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 11891 - 12098
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  11891 tgtttagcatgaacaaccggatctttgatgctttaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaac 11990  T
Q  101 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11991 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcaaacatcaatagttttaacaattgtttgttcagtatggacaa 12090  T
Q  201 ccgaatct 208  Q
    ||| ||||    
T  12091 ccggatct 12098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 12087 - 12154
Alignment:
Q  13 acaaccggatctttgatgcttcaccag--------attcggatatcgaagctcaatctcacgaattgt 72  Q
    |||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  12087 acaaccggatctttgatgcttcaccagaatcggatattcggatatcgaagctcaatctcacgaattgt 12154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 26965719 - 26965512
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  26965719 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaac 26965620  T
Q  101 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26965619 aattgatcaaccataataatacaacgcttgtatagttaggtaccctaatacgacaatcaaacatcaatagttttaacaattgtttgttcagtatggacaa 26965520  T
Q  201 ccgaatct 208  Q
    ||| ||||    
T  26965519 ccggatct 26965512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 5709582 - 5709375
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  5709582 tgtttagaatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgtaaac 5709483  T
Q  101 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5709482 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcaaacatcaatagttttaacaattgtttgttcagtatggacaa 5709383  T
Q  201 ccgaatct 208  Q
    ||| ||||    
T  5709382 ccggatct 5709375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 19924663 - 19924870
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  19924663 tgtttagaatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcgatctcacgaattgttcaaagtcacaacaatcttcttgaaaac 19924762  T
Q  101 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  19924763 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcaaacatcaataattttaacaattgtttgttcagtatggacaa 19924862  T
Q  201 ccgaatct 208  Q
    ||| ||||    
T  19924863 ccggatct 19924870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 10626244 - 10626451
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  10626244 tgtttagcatgaacaaccggatctttgatgcttcatcagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacagtcttcttgaaaac 10626343  T
Q  101 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa 200  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  10626344 aattgatcaaccataataatataactcttgtatagttaggtaccctaatacgacaatcaaacatcaatagtcttaacaattgtttgttcagtatggacaa 10626443  T
Q  201 ccgaatct 208  Q
    ||| ||||    
T  10626444 ccggatct 10626451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 18264350 - 18264141
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtc--acaacaatcttcttgaaa 98  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||    
T  18264350 tgtttagcatgaacaatcggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtctcacaacaatattcttgaaa 18264251  T
Q  99 ataattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggac 198  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18264250 acaattgatcaaccataataatacaactcttgaatagttaggtaccctaatacgacaatcaaacatcaatagttttaacaattgtttgttcagtatggac 18264151  T
Q  199 aaccgaatct 208  Q
    ||||| ||||    
T  18264150 aaccggatct 18264141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 19924859 - 19924926
Alignment:
Q  13 acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattgt 72  Q
    ||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  19924859 acaaccggatctttgatgcttcaccagaattagatattcggatatcgaagctcaatctcacgaattgt 19924926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 26965523 - 26965457
Alignment:
Q  13 acaaccggatctttgatgcttcaccag--------attcggatatcgaagctcaatctcacgaattg 71  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  26965523 acaaccggatctttgatgcttcaccagaatcggatattcggatatcgaagctcaatctcacgaattg 26965457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 18264152 - 18264085
Alignment:
Q  13 acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattgt 72  Q
    ||||||||||||||||||||||||||||        ||||||||||||||||||||||||||| ||||    
T  18264152 acaaccggatctttgatgcttcaccagaatcagatattcggatatcgaagctcaatctcacgagttgt 18264085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 5709386 - 5709320
Alignment:
Q  13 acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattg 71  Q
    |||||||||||||||||| |||||||||        |||||||||||||||||||||||||||||||    
T  5709386 acaaccggatctttgatgtttcaccagaatcagatattcggatatcgaagctcaatctcacgaattg 5709320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 10626440 - 10626507
Alignment:
Q  13 acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattgt 72  Q
    ||||||||||||||||||||| ||||||        ||||||||||||||||||||||||||| ||||    
T  10626440 acaaccggatctttgatgcttaaccagaatcagatattcggatatcgaagctcaatctcacgagttgt 10626507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 13243890 - 13243683
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  13243890 tgtttagcatgaacaaccggatctttgatgtttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaac 13243791  T
Q  101 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13243790 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcaaacatcaatagttttaacaattgtttgttcagtatggacaa 13243691  T
Q  201 ccgaatct 208  Q
    ||| ||||    
T  13243690 ccggatct 13243683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 10577400 - 10577607
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  10577400 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacagtcttcttgaaaac 10577499  T
Q  101 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  10577500 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcaaacattaatagttttaacaattgtttgttcagtatggacaa 10577599  T
Q  201 ccgaatct 208  Q
    ||| ||||    
T  10577600 ccggatct 10577607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 13243694 - 13243658
Alignment:
Q  13 acaaccggatctttgatgcttcaccagattcggatat 49  Q
    |||||||||||||||||||||||||||| ||||||||    
T  13243694 acaaccggatctttgatgcttcaccagaatcggatat 13243658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 10577596 - 10577663
Alignment:
Q  13 acaaccggatctttgatgcttcaccag--------attcggatatcgaagctcaatctcacgaattgt 72  Q
    |||||||||||||||||||||||||||        |||||||||||||| ||||||||||||| ||||    
T  10577596 acaaccggatctttgatgcttcaccagaatcagatattcggatatcgaaactcaatctcacgagttgt 10577663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 188; Significance: 1e-102; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 29311148 - 29310949
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  29311148 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaac 29311049  T
Q  101 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29311048 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacaacaatcaaacatcaatagttttaacaattgtttgttcagtatggacaa 29310949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 17689433 - 17689640
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  17689433 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaac 17689532  T
Q  101 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa 200  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  17689533 aattgatcaaccatgataatacaactcttgtatagttaggtaacctaatacgacaatcaaacatcaatagttttaacaattgttcgttcagtatggacaa 17689632  T
Q  201 ccgaatct 208  Q
    ||| ||||    
T  17689633 ccggatct 17689640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 27298873 - 27298666
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  27298873 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaac 27298774  T
Q  101 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa 200  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  27298773 aattgatcaaccatgataatacaactcttgtatagttaggtaacctaatacgacaatcaaacatcaatagttttaacaattgttcgttcagtatggacaa 27298674  T
Q  201 ccgaatct 208  Q
    ||| ||||    
T  27298673 ccggatct 27298666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 27273997 - 27273807
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  27273997 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaac 27273898  T
Q  101 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcag 191  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  27273897 aattgatcaaccatgataatacaactcttgtatagttaggtaacctaatacgacaatcaaacatcaatagttttaacaattgttcgttcag 27273807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 28174342 - 28174150
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat 100  Q
    ||||||| |||||  |||| |||||| ||| ||||||| |||| ||| |||||| | | ||||| |||||||||||| |||||| |||||| ||||||      
T  28174342 tgtttagtatgaaataccgaatctttaatgtttcaccatattcagatttcgaagttaattctcatgaattgttcaaattcacaataatctt-ttgaaagc 28174244  T
Q  101 aattgat---------caaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgttt 185  Q
    |||||||         ||||||| | |||||||||||||||||||||||||||||||| | ||||||| ||||| |||||||||||||||||||    
T  28174243 aattgattgtatgaaacaaccatgacaatacaactcttgtatagttaggtaccctaatgcaacaatcaaacatcgatagttttaacaattgttt 28174150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 17689629 - 17689695
Alignment:
Q  13 acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattg 71  Q
    ||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  17689629 acaaccggatctttgatgcttcaccagaatcagatattcggatatcgaagctcaatctcacgaattg 17689695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 27298677 - 27298611
Alignment:
Q  13 acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattg 71  Q
    ||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  27298677 acaaccggatctttgatgcttcaccagaatcagatattcggatatcgaagctcaatctcacgaattg 27298611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 29310952 - 29310886
Alignment:
Q  13 acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattg 71  Q
    |||| |||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  29310952 acaatcggatctttgatgcttcaccagaatcggatattcggatatcgaagctcaatctcacgaattg 29310886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 28174131 - 28174079
Alignment:
Q  20 gatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgt 72  Q
    ||||||||||| || |||||| || |||||| |||||||||||||||||||||    
T  28174131 gatctttgatgttttaccagaatcagatatcaaagctcaatctcacgaattgt 28174079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 180; Significance: 2e-97; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 28185 - 28392
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  28185 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaaaaatcttcttgaaaac 28284  T
Q  101 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||    
T  28285 aattgatcaaccataataatacaacacttgtatagttaggtaccctaatacgacaatcaaacatcaatagttttaacaattgtttgttcggcatggacaa 28384  T
Q  201 ccgaatct 208  Q
    ||| ||||    
T  28385 ccggatct 28392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 28375 - 28448
Alignment:
Q  7 gcatgaacaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattgt 72  Q
    ||||| ||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  28375 gcatggacaaccggatctttgatgcttcaccagaatcgtatattcggatatcgaagctcaatctcacgaattgt 28448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 179; Significance: 9e-97; HSPs: 3)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 9282 - 9491
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtc--acaacaatcttcttgaaa 98  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||    
T  9282 tgtttagcatgaacaatcggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtctcacaacaatattcttgaaa 9381  T
Q  99 ataattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggac 198  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9382 acaattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcaaacatcaatagttttaacaattgtttgttcagtatggac 9481  T
Q  199 aaccgaatct 208  Q
    ||||| ||||    
T  9482 aaccggatct 9491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 16134 - 16209
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaa 76  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16134 tgtttagcatgaacaaccggacctttgatgcttcaccagattcggatatcaaagctcaatctcacgaattgttcaa 16209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 9480 - 9547
Alignment:
Q  13 acaaccggatctttgatgcttcaccag--------attcggatatcgaagctcaatctcacgaattgt 72  Q
    |||||||||||||||||||||||||||        |||||||||||||||||||||||||||| ||||    
T  9480 acaaccggatctttgatgcttcaccagaatcagatattcggatatcgaagctcaatctcacgagttgt 9547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 176; Significance: 6e-95; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 19712165 - 19712372
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat 100  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||     
T  19712165 tgtttagcatgaacagccagatctttgatgcttcaccagattcggatatcgaaactcaatctcacgaattgttcaaagtcacaacaattttcttgaaaac 19712264  T
Q  101 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  19712265 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcaaacatcaatagttttaacaattgtttgttccgtatggacaa 19712364  T
Q  201 ccgaatct 208  Q
    ||| ||||    
T  19712365 ccggatct 19712372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 33130770 - 33130858
Alignment:
Q  114 taataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaacc 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33130770 taataatacaactcttgtatagttaggtaccctaatacgacaatcaaacatcaatagttttaacaattgtttgttcagtatggacaacc 33130858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 19712361 - 19712428
Alignment:
Q  13 acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattgt 72  Q
    |||||||||||||||||||||||||| |        ||||||||||||||||||||||||||| ||||    
T  19712361 acaaccggatctttgatgcttcaccaaaatcagatattcggatatcgaagctcaatctcacgagttgt 19712428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 172; Significance: 1e-92; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 4955 - 4748
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat 100  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||     
T  4955 tgtttagcatgaacaaccagatctttaatgcttcaccagattcggatattgaaactcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaac 4856  T
Q  101 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||    
T  4855 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcaaacatcaatatttttaataattgtttgttcagtatggacaa 4756  T
Q  201 ccgaatct 208  Q
    ||| ||||    
T  4755 ccggatct 4748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 4759 - 4692
Alignment:
Q  13 acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattgt 72  Q
    ||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  4759 acaaccggatctttgatgcttcaccagaattggatattcggatatcgaagctcaatctcacgaattgt 4692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 171; Significance: 5e-92; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 11540982 - 11541191
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  11540982 tgtttagcatgaacaaccggatctttgatgattcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaataatcttcttgaaaac 11541081  T
Q  101 aattgatcaaccataataatacaactcttgtatagttaggtaccctaat--acgacaatcacacatcaatagttttaacaattgtttgttcagtatggac 198  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  11541082 aattgatcaaccataataatacaattcttgtatagttaggtaccctaatacacgacaatcaaacatcaataattttaacaattgtttgttcagtatggac 11541181  T
Q  199 aaccgaatct 208  Q
    ||||| ||||    
T  11541182 aaccggatct 11541191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 11541180 - 11541247
Alignment:
Q  13 acaaccggatctttgatgcttcaccag--------attcggatatcgaagctcaatctcacgaattgt 72  Q
    |||||||||||||||||||||||||||        |||||||||||||||||||||||||||| ||||    
T  11541180 acaaccggatctttgatgcttcaccagaatcagatattcggatatcgaagctcaatctcacgagttgt 11541247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1679 (Bit Score: 170; Significance: 2e-91; HSPs: 2)
Name: scaffold1679
Description:

Target: scaffold1679; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 820 - 619
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| | |||||||||     
T  820 tgtttagcatgaacaaccggatctttgatgcttcaccagattcgtatatcgaagcttaatctcacgaattgttcaaagtcacaacaaccatcttgaaaac 721  T
Q  101 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa 200  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  720 aattgatcaaccgtaataatacaactcttgtatagttaggtacgctaatacgacaatcaaacatcaatagttttaacaattgtttgttcagtatggacaa 621  T
Q  201 cc 202  Q
    ||    
T  620 cc 619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1679; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 624 - 557
Alignment:
Q  13 acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattgt 72  Q
    |||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  624 acaacctgatctttgatgcttcaccagaatcggatattcggatatcgaagctcaatctcacgaattgt 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 1e-89; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 18254224 - 18254023
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  18254224 tgtttagcatgaacaatcggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaataatcttcttgaaaac 18254125  T
Q  101 aattgatcaaccataataatacaactcttgtatagttaggtaccctaat--acgacaatcacacatcaatagttttaacaattgtttgttcagtatggac 198  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  18254124 aattgatcaaccataataatacaattcttgtatagttaggtaccctaatacacgacaatcaaacatcaataattttaacaattgtttgttcagtatggac 18254025  T
Q  199 aa 200  Q
    ||    
T  18254024 aa 18254023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 18254026 - 18253960
Alignment:
Q  13 acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattg 71  Q
    |||| |||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  18254026 acaatcggatctttgatgcttcaccagaatcggatattcggatatcgaagctcaatctcacgaattg 18253960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 156; Significance: 5e-83; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 24637887 - 24637688
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat 100  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  24637887 tgtttagcatgaacaaccggatctttgatgattaaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaac 24637788  T
Q  101 aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa 200  Q
    ||||||||||||||| |||||||||||||||||||||| ||| ||||||  |||||||| |||| |||||||||||||||||||||||| ||||||||||    
T  24637787 aattgatcaaccatagtaatacaactcttgtatagttatgtatcctaatctgacaatcaaacattaatagttttaacaattgtttgttccgtatggacaa 24637688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 22108036 - 22107898
Alignment:
Q  1 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||     
T  22108036 tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatattcttaaaaac 22107937  T
Q  101 aattgatcaaccataataatacaactcttgtatagttag 139  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22107936 aattgatcaaccataataatacaactcttgtatagttag 22107898  T

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Target: scaffold0008 (Bit Score: 149; Significance: 7e-79; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 4 - 208
Target Start/End: Original strand, 228407 - 228611
Alignment:
Q  4 ttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaataat 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||  ||| ||| |||    
T  228407 ttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaattcacatcaatctctttgtaaacaat 228506  T
Q  104 tgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaaccg 203  Q
    |||||||||| |||||||||||||||||||||||  ||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  228507 tgatcaaccacaataatacaactcttgtatagttgtgtatcctaatacgataatcaaacatcaatagttttaacaattgtttgttcagtatgaacaaccg 228606  T
Q  204 aatct 208  Q
     ||||    
T  228607 gatct 228611  T

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Target: scaffold0008; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 228596 - 228636
Alignment:
Q  9 atgaacaaccggatctttgatgcttcaccagattcggatat 49  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  228596 atgaacaaccggatctttgatgcttcaccagaatcggatat 228636  T

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Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 25497925 - 25498014
Alignment:
Q  111 ccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa 200  Q
    |||||| |||||||||||| ||||| || | |||||||| |||| |||| ||||||||||||| ||  ||||||  ||||||||| ||||    
T  25497925 ccataacaatacaactcttttataggtatgaaccctaatgcgacgatcaaacatcaatagtttcaaggattgttcattcagtatgaacaa 25498014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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