View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20227_low_15 (Length: 225)
Name: NF20227_low_15
Description: NF20227
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20227_low_15 |
 | |
|
| [»] scaffold0390 (2 HSPs) |
| | |
|
| [»] scaffold0203 (2 HSPs) |
| | |
|
| [»] scaffold0234 (3 HSPs) |
| | |
|
| [»] scaffold0657 (2 HSPs) |
| | |
|
| [»] scaffold1679 (2 HSPs) |
| | |
|
| [»] scaffold0008 (2 HSPs) |
| | |
|
Alignment Details
Target: scaffold0390 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0390
Description:
Target: scaffold0390; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 11891 - 12098
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11891 |
tgtttagcatgaacaaccggatctttgatgctttaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaac |
11990 |
T |
|
| Q |
101 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11991 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcaaacatcaatagttttaacaattgtttgttcagtatggacaa |
12090 |
T |
|
| Q |
201 |
ccgaatct |
208 |
Q |
| |
|
||| |||| |
|
|
| T |
12091 |
ccggatct |
12098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0390; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 12087 - 12154
Alignment:
| Q |
13 |
acaaccggatctttgatgcttcaccag--------attcggatatcgaagctcaatctcacgaattgt |
72 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
12087 |
acaaccggatctttgatgcttcaccagaatcggatattcggatatcgaagctcaatctcacgaattgt |
12154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 26965719 - 26965512
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26965719 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaac |
26965620 |
T |
|
| Q |
101 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa |
200 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26965619 |
aattgatcaaccataataatacaacgcttgtatagttaggtaccctaatacgacaatcaaacatcaatagttttaacaattgtttgttcagtatggacaa |
26965520 |
T |
|
| Q |
201 |
ccgaatct |
208 |
Q |
| |
|
||| |||| |
|
|
| T |
26965519 |
ccggatct |
26965512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 5709582 - 5709375
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat |
100 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
5709582 |
tgtttagaatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgtaaac |
5709483 |
T |
|
| Q |
101 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5709482 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcaaacatcaatagttttaacaattgtttgttcagtatggacaa |
5709383 |
T |
|
| Q |
201 |
ccgaatct |
208 |
Q |
| |
|
||| |||| |
|
|
| T |
5709382 |
ccggatct |
5709375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 19924663 - 19924870
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat |
100 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19924663 |
tgtttagaatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcgatctcacgaattgttcaaagtcacaacaatcttcttgaaaac |
19924762 |
T |
|
| Q |
101 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
19924763 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcaaacatcaataattttaacaattgtttgttcagtatggacaa |
19924862 |
T |
|
| Q |
201 |
ccgaatct |
208 |
Q |
| |
|
||| |||| |
|
|
| T |
19924863 |
ccggatct |
19924870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 10626244 - 10626451
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
10626244 |
tgtttagcatgaacaaccggatctttgatgcttcatcagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacagtcttcttgaaaac |
10626343 |
T |
|
| Q |
101 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa |
200 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10626344 |
aattgatcaaccataataatataactcttgtatagttaggtaccctaatacgacaatcaaacatcaatagtcttaacaattgtttgttcagtatggacaa |
10626443 |
T |
|
| Q |
201 |
ccgaatct |
208 |
Q |
| |
|
||| |||| |
|
|
| T |
10626444 |
ccggatct |
10626451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 18264350 - 18264141
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtc--acaacaatcttcttgaaa |
98 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
18264350 |
tgtttagcatgaacaatcggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtctcacaacaatattcttgaaa |
18264251 |
T |
|
| Q |
99 |
ataattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggac |
198 |
Q |
| |
|
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18264250 |
acaattgatcaaccataataatacaactcttgaatagttaggtaccctaatacgacaatcaaacatcaatagttttaacaattgtttgttcagtatggac |
18264151 |
T |
|
| Q |
199 |
aaccgaatct |
208 |
Q |
| |
|
||||| |||| |
|
|
| T |
18264150 |
aaccggatct |
18264141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 19924859 - 19924926
Alignment:
| Q |
13 |
acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattgt |
72 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
19924859 |
acaaccggatctttgatgcttcaccagaattagatattcggatatcgaagctcaatctcacgaattgt |
19924926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 26965523 - 26965457
Alignment:
| Q |
13 |
acaaccggatctttgatgcttcaccag--------attcggatatcgaagctcaatctcacgaattg |
71 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
26965523 |
acaaccggatctttgatgcttcaccagaatcggatattcggatatcgaagctcaatctcacgaattg |
26965457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 18264152 - 18264085
Alignment:
| Q |
13 |
acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattgt |
72 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
18264152 |
acaaccggatctttgatgcttcaccagaatcagatattcggatatcgaagctcaatctcacgagttgt |
18264085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 5709386 - 5709320
Alignment:
| Q |
13 |
acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattg |
71 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
5709386 |
acaaccggatctttgatgtttcaccagaatcagatattcggatatcgaagctcaatctcacgaattg |
5709320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 10626440 - 10626507
Alignment:
| Q |
13 |
acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattgt |
72 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
10626440 |
acaaccggatctttgatgcttaaccagaatcagatattcggatatcgaagctcaatctcacgagttgt |
10626507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 13243890 - 13243683
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13243890 |
tgtttagcatgaacaaccggatctttgatgtttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaac |
13243791 |
T |
|
| Q |
101 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13243790 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcaaacatcaatagttttaacaattgtttgttcagtatggacaa |
13243691 |
T |
|
| Q |
201 |
ccgaatct |
208 |
Q |
| |
|
||| |||| |
|
|
| T |
13243690 |
ccggatct |
13243683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 10577400 - 10577607
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
10577400 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacagtcttcttgaaaac |
10577499 |
T |
|
| Q |
101 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10577500 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcaaacattaatagttttaacaattgtttgttcagtatggacaa |
10577599 |
T |
|
| Q |
201 |
ccgaatct |
208 |
Q |
| |
|
||| |||| |
|
|
| T |
10577600 |
ccggatct |
10577607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 13243694 - 13243658
Alignment:
| Q |
13 |
acaaccggatctttgatgcttcaccagattcggatat |
49 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |
|
|
| T |
13243694 |
acaaccggatctttgatgcttcaccagaatcggatat |
13243658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 10577596 - 10577663
Alignment:
| Q |
13 |
acaaccggatctttgatgcttcaccag--------attcggatatcgaagctcaatctcacgaattgt |
72 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||| |
|
|
| T |
10577596 |
acaaccggatctttgatgcttcaccagaatcagatattcggatatcgaaactcaatctcacgagttgt |
10577663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 188; Significance: 1e-102; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 29311148 - 29310949
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29311148 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaac |
29311049 |
T |
|
| Q |
101 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29311048 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacaacaatcaaacatcaatagttttaacaattgtttgttcagtatggacaa |
29310949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 17689433 - 17689640
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17689433 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaac |
17689532 |
T |
|
| Q |
101 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa |
200 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
17689533 |
aattgatcaaccatgataatacaactcttgtatagttaggtaacctaatacgacaatcaaacatcaatagttttaacaattgttcgttcagtatggacaa |
17689632 |
T |
|
| Q |
201 |
ccgaatct |
208 |
Q |
| |
|
||| |||| |
|
|
| T |
17689633 |
ccggatct |
17689640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 27298873 - 27298666
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27298873 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaac |
27298774 |
T |
|
| Q |
101 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa |
200 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
27298773 |
aattgatcaaccatgataatacaactcttgtatagttaggtaacctaatacgacaatcaaacatcaatagttttaacaattgttcgttcagtatggacaa |
27298674 |
T |
|
| Q |
201 |
ccgaatct |
208 |
Q |
| |
|
||| |||| |
|
|
| T |
27298673 |
ccggatct |
27298666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 27273997 - 27273807
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27273997 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaac |
27273898 |
T |
|
| Q |
101 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcag |
191 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
27273897 |
aattgatcaaccatgataatacaactcttgtatagttaggtaacctaatacgacaatcaaacatcaatagttttaacaattgttcgttcag |
27273807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 28174342 - 28174150
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat |
100 |
Q |
| |
|
||||||| ||||| |||| |||||| ||| ||||||| |||| ||| |||||| | | ||||| |||||||||||| |||||| |||||| |||||| |
|
|
| T |
28174342 |
tgtttagtatgaaataccgaatctttaatgtttcaccatattcagatttcgaagttaattctcatgaattgttcaaattcacaataatctt-ttgaaagc |
28174244 |
T |
|
| Q |
101 |
aattgat---------caaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgttt |
185 |
Q |
| |
|
||||||| ||||||| | |||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||||||||||||| |
|
|
| T |
28174243 |
aattgattgtatgaaacaaccatgacaatacaactcttgtatagttaggtaccctaatgcaacaatcaaacatcgatagttttaacaattgttt |
28174150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 17689629 - 17689695
Alignment:
| Q |
13 |
acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattg |
71 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
17689629 |
acaaccggatctttgatgcttcaccagaatcagatattcggatatcgaagctcaatctcacgaattg |
17689695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 27298677 - 27298611
Alignment:
| Q |
13 |
acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattg |
71 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
27298677 |
acaaccggatctttgatgcttcaccagaatcagatattcggatatcgaagctcaatctcacgaattg |
27298611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 29310952 - 29310886
Alignment:
| Q |
13 |
acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattg |
71 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
29310952 |
acaatcggatctttgatgcttcaccagaatcggatattcggatatcgaagctcaatctcacgaattg |
29310886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 28174131 - 28174079
Alignment:
| Q |
20 |
gatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgt |
72 |
Q |
| |
|
||||||||||| || |||||| || |||||| ||||||||||||||||||||| |
|
|
| T |
28174131 |
gatctttgatgttttaccagaatcagatatcaaagctcaatctcacgaattgt |
28174079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0203 (Bit Score: 180; Significance: 2e-97; HSPs: 2)
Name: scaffold0203
Description:
Target: scaffold0203; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 28185 - 28392
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
28185 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaaaaatcttcttgaaaac |
28284 |
T |
|
| Q |
101 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa |
200 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
28285 |
aattgatcaaccataataatacaacacttgtatagttaggtaccctaatacgacaatcaaacatcaatagttttaacaattgtttgttcggcatggacaa |
28384 |
T |
|
| Q |
201 |
ccgaatct |
208 |
Q |
| |
|
||| |||| |
|
|
| T |
28385 |
ccggatct |
28392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0203; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 28375 - 28448
Alignment:
| Q |
7 |
gcatgaacaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattgt |
72 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
28375 |
gcatggacaaccggatctttgatgcttcaccagaatcgtatattcggatatcgaagctcaatctcacgaattgt |
28448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0234 (Bit Score: 179; Significance: 9e-97; HSPs: 3)
Name: scaffold0234
Description:
Target: scaffold0234; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 9282 - 9491
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtc--acaacaatcttcttgaaa |
98 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
9282 |
tgtttagcatgaacaatcggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtctcacaacaatattcttgaaa |
9381 |
T |
|
| Q |
99 |
ataattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggac |
198 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9382 |
acaattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcaaacatcaatagttttaacaattgtttgttcagtatggac |
9481 |
T |
|
| Q |
199 |
aaccgaatct |
208 |
Q |
| |
|
||||| |||| |
|
|
| T |
9482 |
aaccggatct |
9491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0234; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 16134 - 16209
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaa |
76 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
16134 |
tgtttagcatgaacaaccggacctttgatgcttcaccagattcggatatcaaagctcaatctcacgaattgttcaa |
16209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0234; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 9480 - 9547
Alignment:
| Q |
13 |
acaaccggatctttgatgcttcaccag--------attcggatatcgaagctcaatctcacgaattgt |
72 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |
|
|
| T |
9480 |
acaaccggatctttgatgcttcaccagaatcagatattcggatatcgaagctcaatctcacgagttgt |
9547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 176; Significance: 6e-95; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 19712165 - 19712372
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat |
100 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
19712165 |
tgtttagcatgaacagccagatctttgatgcttcaccagattcggatatcgaaactcaatctcacgaattgttcaaagtcacaacaattttcttgaaaac |
19712264 |
T |
|
| Q |
101 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
19712265 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcaaacatcaatagttttaacaattgtttgttccgtatggacaa |
19712364 |
T |
|
| Q |
201 |
ccgaatct |
208 |
Q |
| |
|
||| |||| |
|
|
| T |
19712365 |
ccggatct |
19712372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 33130770 - 33130858
Alignment:
| Q |
114 |
taataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaacc |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33130770 |
taataatacaactcttgtatagttaggtaccctaatacgacaatcaaacatcaatagttttaacaattgtttgttcagtatggacaacc |
33130858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 19712361 - 19712428
Alignment:
| Q |
13 |
acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattgt |
72 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||| |
|
|
| T |
19712361 |
acaaccggatctttgatgcttcaccaaaatcagatattcggatatcgaagctcaatctcacgagttgt |
19712428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0657 (Bit Score: 172; Significance: 1e-92; HSPs: 2)
Name: scaffold0657
Description:
Target: scaffold0657; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 4955 - 4748
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat |
100 |
Q |
| |
|
|||||||||||||||||| ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4955 |
tgtttagcatgaacaaccagatctttaatgcttcaccagattcggatattgaaactcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaac |
4856 |
T |
|
| Q |
101 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
4855 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcaaacatcaatatttttaataattgtttgttcagtatggacaa |
4756 |
T |
|
| Q |
201 |
ccgaatct |
208 |
Q |
| |
|
||| |||| |
|
|
| T |
4755 |
ccggatct |
4748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0657; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 4759 - 4692
Alignment:
| Q |
13 |
acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattgt |
72 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4759 |
acaaccggatctttgatgcttcaccagaattggatattcggatatcgaagctcaatctcacgaattgt |
4692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 171; Significance: 5e-92; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 11540982 - 11541191
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
11540982 |
tgtttagcatgaacaaccggatctttgatgattcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaataatcttcttgaaaac |
11541081 |
T |
|
| Q |
101 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaat--acgacaatcacacatcaatagttttaacaattgtttgttcagtatggac |
198 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
11541082 |
aattgatcaaccataataatacaattcttgtatagttaggtaccctaatacacgacaatcaaacatcaataattttaacaattgtttgttcagtatggac |
11541181 |
T |
|
| Q |
199 |
aaccgaatct |
208 |
Q |
| |
|
||||| |||| |
|
|
| T |
11541182 |
aaccggatct |
11541191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 11541180 - 11541247
Alignment:
| Q |
13 |
acaaccggatctttgatgcttcaccag--------attcggatatcgaagctcaatctcacgaattgt |
72 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |
|
|
| T |
11541180 |
acaaccggatctttgatgcttcaccagaatcagatattcggatatcgaagctcaatctcacgagttgt |
11541247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1679 (Bit Score: 170; Significance: 2e-91; HSPs: 2)
Name: scaffold1679
Description:
Target: scaffold1679; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 820 - 619
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
820 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcgtatatcgaagcttaatctcacgaattgttcaaagtcacaacaaccatcttgaaaac |
721 |
T |
|
| Q |
101 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa |
200 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
720 |
aattgatcaaccgtaataatacaactcttgtatagttaggtacgctaatacgacaatcaaacatcaatagttttaacaattgtttgttcagtatggacaa |
621 |
T |
|
| Q |
201 |
cc |
202 |
Q |
| |
|
|| |
|
|
| T |
620 |
cc |
619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1679; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 624 - 557
Alignment:
| Q |
13 |
acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattgt |
72 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
624 |
acaacctgatctttgatgcttcaccagaatcggatattcggatatcgaagctcaatctcacgaattgt |
557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 167; Significance: 1e-89; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 18254224 - 18254023
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
18254224 |
tgtttagcatgaacaatcggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaataatcttcttgaaaac |
18254125 |
T |
|
| Q |
101 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaat--acgacaatcacacatcaatagttttaacaattgtttgttcagtatggac |
198 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
18254124 |
aattgatcaaccataataatacaattcttgtatagttaggtaccctaatacacgacaatcaaacatcaataattttaacaattgtttgttcagtatggac |
18254025 |
T |
|
| Q |
199 |
aa |
200 |
Q |
| |
|
|| |
|
|
| T |
18254024 |
aa |
18254023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 18254026 - 18253960
Alignment:
| Q |
13 |
acaaccggatctttgatgcttcaccaga--------ttcggatatcgaagctcaatctcacgaattg |
71 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
18254026 |
acaatcggatctttgatgcttcaccagaatcggatattcggatatcgaagctcaatctcacgaattg |
18253960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 156; Significance: 5e-83; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 24637887 - 24637688
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24637887 |
tgtttagcatgaacaaccggatctttgatgattaaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaac |
24637788 |
T |
|
| Q |
101 |
aattgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa |
200 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||| |||||| |||||||| |||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
24637787 |
aattgatcaaccatagtaatacaactcttgtatagttatgtatcctaatctgacaatcaaacattaatagttttaacaattgtttgttccgtatggacaa |
24637688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 22108036 - 22107898
Alignment:
| Q |
1 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
22108036 |
tgtttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatattcttaaaaac |
22107937 |
T |
|
| Q |
101 |
aattgatcaaccataataatacaactcttgtatagttag |
139 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22107936 |
aattgatcaaccataataatacaactcttgtatagttag |
22107898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 149; Significance: 7e-79; HSPs: 2)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 4 - 208
Target Start/End: Original strand, 228407 - 228611
Alignment:
| Q |
4 |
ttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaagtcacaacaatcttcttgaaaataat |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||| ||| |
|
|
| T |
228407 |
ttagcatgaacaaccggatctttgatgcttcaccagattcggatatcgaagctcaatctcacgaattgttcaaattcacatcaatctctttgtaaacaat |
228506 |
T |
|
| Q |
104 |
tgatcaaccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaaccg |
203 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
228507 |
tgatcaaccacaataatacaactcttgtatagttgtgtatcctaatacgataatcaaacatcaatagttttaacaattgtttgttcagtatgaacaaccg |
228606 |
T |
|
| Q |
204 |
aatct |
208 |
Q |
| |
|
|||| |
|
|
| T |
228607 |
gatct |
228611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 228596 - 228636
Alignment:
| Q |
9 |
atgaacaaccggatctttgatgcttcaccagattcggatat |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
228596 |
atgaacaaccggatctttgatgcttcaccagaatcggatat |
228636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 25497925 - 25498014
Alignment:
| Q |
111 |
ccataataatacaactcttgtatagttaggtaccctaatacgacaatcacacatcaatagttttaacaattgtttgttcagtatggacaa |
200 |
Q |
| |
|
|||||| |||||||||||| ||||| || | |||||||| |||| |||| ||||||||||||| || |||||| ||||||||| |||| |
|
|
| T |
25497925 |
ccataacaatacaactcttttataggtatgaaccctaatgcgacgatcaaacatcaatagtttcaaggattgttcattcagtatgaacaa |
25498014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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