View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2022_low_7 (Length: 240)
Name: NF2022_low_7
Description: NF2022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2022_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 26019136 - 26019361
Alignment:
| Q |
1 |
aagagtgatgttattgtcaagacatttaggtacttgtaaagaagatggtgaattgccatctatctcatctcatctagtctcgtcttcaatgataatgaac |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
26019136 |
aagagtgatgttattgtcaagacatttaggtacttgtaaagaagatggtgaattgccatctatctcaactcatctagtctcgtcttcaatgataatgaac |
26019235 |
T |
|
| Q |
101 |
aaattttttcagctttgagttagctggcaactgtcctacaaactaaatttgtcgaggacatagccaatagtcaaaaatggggggttttagtgtcttaatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26019236 |
aaattttttcagctttgagttagctggcaactgtcctacaaactaaatttgtcgaggacatagccaatagtcaaaaatggggggttttagtgtcttaatt |
26019335 |
T |
|
| Q |
201 |
ataaggtcctcgtcggtgatagtttt |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
26019336 |
ataaggtcctcgtcggtgatagtttt |
26019361 |
T |
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