View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20234_low_5 (Length: 304)

Name: NF20234_low_5
Description: NF20234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20234_low_5
NF20234_low_5
[»] chr8 (25 HSPs)
chr8 (17-289)||(24691769-24692043)
chr8 (1-75)||(31654663-31654737)
chr8 (1-82)||(6552705-6552786)
chr8 (1-82)||(33289260-33289341)
chr8 (1-81)||(54612-54692)
chr8 (1-81)||(2890162-2890242)
chr8 (1-81)||(7785778-7785858)
chr8 (1-81)||(39571203-39571283)
chr8 (1-81)||(3304278-3304358)
chr8 (1-81)||(7805699-7805779)
chr8 (1-81)||(12763654-12763734)
chr8 (1-81)||(15888352-15888432)
chr8 (1-81)||(25601000-25601080)
chr8 (1-81)||(32211363-32211443)
chr8 (1-81)||(43199354-43199434)
chr8 (1-81)||(44498187-44498267)
chr8 (1-75)||(12343146-12343220)
chr8 (1-74)||(13578907-13578980)
chr8 (3-75)||(7012223-7012295)
chr8 (1-81)||(32114475-32114555)
chr8 (1-70)||(27422240-27422309)
chr8 (1-56)||(8587220-8587275)
chr8 (25-70)||(15688041-15688086)
chr8 (1-50)||(28463661-28463710)
chr8 (27-75)||(28463617-28463665)
[»] chr5 (23 HSPs)
chr5 (1-91)||(11795218-11795308)
chr5 (1-81)||(9395400-9395480)
chr5 (1-81)||(36563538-36563618)
chr5 (1-81)||(37148955-37149035)
chr5 (1-81)||(41989407-41989487)
chr5 (1-60)||(583039-583098)
chr5 (1-75)||(23359992-23360066)
chr5 (1-81)||(6126874-6126954)
chr5 (1-81)||(13103074-13103154)
chr5 (1-69)||(13033101-13033169)
chr5 (1-81)||(17025674-17025754)
chr5 (1-81)||(21575996-21576076)
chr5 (1-81)||(26350350-26350430)
chr5 (1-81)||(37642004-37642084)
chr5 (1-81)||(20848124-20848203)
chr5 (1-45)||(4444010-4444054)
chr5 (1-56)||(2366363-2366418)
chr5 (9-75)||(966206-966272)
chr5 (4-39)||(13539909-13539944)
chr5 (1-46)||(35904449-35904492)
chr5 (14-47)||(9006916-9006949)
chr5 (3-60)||(40138811-40138868)
chr5 (1-45)||(39290824-39290868)
[»] chr1 (29 HSPs)
chr1 (1-91)||(44668084-44668173)
chr1 (1-82)||(27159357-27159438)
chr1 (1-81)||(14984887-14984967)
chr1 (1-81)||(17556803-17556883)
chr1 (1-81)||(31842795-31842875)
chr1 (1-81)||(39401966-39402046)
chr1 (1-75)||(9981697-9981771)
chr1 (4-81)||(11795986-11796063)
chr1 (1-81)||(25694369-25694449)
chr1 (1-81)||(26471065-26471145)
chr1 (1-81)||(34042746-34042826)
chr1 (1-81)||(47216699-47216779)
chr1 (1-81)||(47777481-47777561)
chr1 (1-56)||(23278026-23278081)
chr1 (1-75)||(44955212-44955286)
chr1 (4-81)||(1050941-1051018)
chr1 (1-81)||(47969745-47969825)
chr1 (1-56)||(47588362-47588417)
chr1 (1-81)||(11897104-11897184)
chr1 (1-81)||(12483628-12483708)
chr1 (3-81)||(11989833-11989911)
chr1 (1-70)||(37552191-37552260)
chr1 (1-50)||(16448139-16448188)
chr1 (25-81)||(16448182-16448238)
chr1 (1-56)||(12213499-12213554)
chr1 (16-59)||(17167768-17167811)
chr1 (1-47)||(1598415-1598460)
chr1 (1-45)||(571557-571601)
chr1 (25-81)||(11897054-11897110)
[»] chr4 (30 HSPs)
chr4 (1-82)||(6121892-6121973)
chr4 (1-82)||(47833661-47833742)
chr4 (1-70)||(52756725-52756794)
chr4 (1-82)||(46797775-46797856)
chr4 (1-81)||(3372171-3372251)
chr4 (1-81)||(3422110-3422190)
chr4 (1-81)||(3993026-3993106)
chr4 (1-81)||(5986926-5987006)
chr4 (1-81)||(20538686-20538766)
chr4 (1-81)||(33621846-33621926)
chr4 (1-81)||(42797782-42797862)
chr4 (1-81)||(47838617-47838697)
chr4 (1-81)||(48336313-48336393)
chr4 (1-81)||(53337420-53337500)
chr4 (1-75)||(43900599-43900673)
chr4 (1-81)||(3904683-3904763)
chr4 (1-69)||(24704420-24704488)
chr4 (1-81)||(41469766-41469846)
chr4 (5-81)||(51894582-51894658)
chr4 (1-56)||(7579360-7579415)
chr4 (1-80)||(40913190-40913269)
chr4 (1-70)||(41615687-41615756)
chr4 (1-56)||(33551251-33551306)
chr4 (1-52)||(50430447-50430498)
chr4 (1-42)||(26231627-26231668)
chr4 (1-59)||(25855133-25855191)
chr4 (1-81)||(17344263-17344343)
chr4 (14-81)||(4780358-4780425)
chr4 (10-69)||(45478151-45478210)
chr4 (27-81)||(17236864-17236918)
[»] chr7 (22 HSPs)
chr7 (1-81)||(1738447-1738527)
chr7 (1-81)||(7240799-7240879)
chr7 (1-81)||(9268806-9268886)
chr7 (1-81)||(46840910-46840990)
chr7 (1-92)||(38441510-38441601)
chr7 (1-70)||(38063924-38063993)
chr7 (1-81)||(7482275-7482355)
chr7 (1-81)||(22285749-22285829)
chr7 (1-81)||(23314139-23314219)
chr7 (1-81)||(31319399-31319479)
chr7 (1-56)||(1565754-1565809)
chr7 (1-76)||(33418426-33418501)
chr7 (1-82)||(94317-94398)
chr7 (1-70)||(36016207-36016276)
chr7 (1-69)||(36583445-36583513)
chr7 (1-75)||(4790298-4790372)
chr7 (1-81)||(28536751-28536831)
chr7 (1-70)||(40840130-40840199)
chr7 (2-70)||(9575460-9575528)
chr7 (10-70)||(7269416-7269476)
chr7 (22-52)||(7661147-7661177)
chr7 (16-56)||(2853696-2853736)
[»] chr6 (24 HSPs)
chr6 (1-81)||(2830385-2830465)
chr6 (1-81)||(6330165-6330245)
chr6 (1-81)||(8382969-8383049)
chr6 (1-81)||(9644746-9644826)
chr6 (1-81)||(9650763-9650843)
chr6 (1-81)||(11572145-11572225)
chr6 (1-81)||(13853593-13853673)
chr6 (1-81)||(26602373-26602453)
chr6 (1-81)||(8099580-8099660)
chr6 (1-81)||(28747134-28747214)
chr6 (1-75)||(35031007-35031081)
chr6 (1-70)||(8417804-8417873)
chr6 (1-70)||(33052805-33052874)
chr6 (1-81)||(6068616-6068696)
chr6 (2-46)||(22896513-22896557)
chr6 (1-56)||(6143604-6143659)
chr6 (1-70)||(17992038-17992107)
chr6 (10-82)||(7596976-7597048)
chr6 (7-54)||(3788093-3788140)
chr6 (25-83)||(8186441-8186499)
chr6 (1-43)||(13043808-13043850)
chr6 (99-155)||(20809087-20809143)
chr6 (2-56)||(8026121-8026175)
chr6 (14-56)||(33393171-33393213)
[»] chr3 (29 HSPs)
chr3 (1-81)||(10298029-10298109)
chr3 (1-81)||(19557052-19557132)
chr3 (1-81)||(40690996-40691076)
chr3 (1-81)||(48340447-48340527)
chr3 (1-81)||(49823381-49823461)
chr3 (1-75)||(17653762-17653836)
chr3 (1-75)||(37508971-37509045)
chr3 (1-70)||(8817397-8817466)
chr3 (1-70)||(22721981-22722050)
chr3 (1-82)||(38964442-38964523)
chr3 (1-81)||(2787832-2787912)
chr3 (1-81)||(8437475-8437555)
chr3 (1-69)||(33942944-33943012)
chr3 (1-81)||(34080030-34080110)
chr3 (1-81)||(51406723-51406803)
chr3 (1-56)||(44785421-44785476)
chr3 (1-75)||(4238644-4238718)
chr3 (1-75)||(9111500-9111574)
chr3 (1-75)||(42507361-42507435)
chr3 (1-82)||(21295325-21295406)
chr3 (1-81)||(46208080-46208160)
chr3 (1-56)||(36095705-36095760)
chr3 (1-70)||(42170357-42170426)
chr3 (1-81)||(6013336-6013416)
chr3 (1-69)||(35513523-35513591)
chr3 (16-88)||(34988140-34988212)
chr3 (16-54)||(5323272-5323310)
chr3 (25-81)||(9213516-9213572)
chr3 (95-139)||(30790775-30790819)
[»] chr2 (23 HSPs)
chr2 (1-81)||(3055608-3055688)
chr2 (1-81)||(6648519-6648599)
chr2 (1-81)||(9047755-9047835)
chr2 (1-81)||(12337937-12338017)
chr2 (1-81)||(13197710-13197790)
chr2 (1-81)||(15896892-15896972)
chr2 (1-81)||(37990013-37990093)
chr2 (1-81)||(38917522-38917602)
chr2 (1-81)||(41478639-41478719)
chr2 (1-81)||(41492896-41492976)
chr2 (1-81)||(44398736-44398816)
chr2 (1-70)||(16243794-16243863)
chr2 (1-70)||(44397597-44397666)
chr2 (1-81)||(13344534-13344614)
chr2 (1-81)||(15372276-15372356)
chr2 (1-82)||(16044316-16044397)
chr2 (1-81)||(37666610-37666690)
chr2 (1-56)||(12170424-12170479)
chr2 (1-81)||(30099182-30099262)
chr2 (1-43)||(44804616-44804658)
chr2 (1-42)||(4683971-4684012)
chr2 (1-75)||(16734833-16734907)
chr2 (1-41)||(41453109-41453149)
[»] scaffold1707 (1 HSPs)
scaffold1707 (1-69)||(1385-1453)
[»] scaffold0482 (1 HSPs)
scaffold0482 (1-81)||(12910-12990)
[»] scaffold0204 (1 HSPs)
scaffold0204 (1-81)||(23835-23915)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-81)||(49555-49635)
[»] scaffold0464 (1 HSPs)
scaffold0464 (1-81)||(6131-6211)
[»] scaffold0650 (1 HSPs)
scaffold0650 (1-46)||(20-65)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-47)||(231337-231383)


Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-124; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 17 - 289
Target Start/End: Complemental strand, 24692043 - 24691769
Alignment:
Q  17 ttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtaccatatttgttaatttatgtgtattttccaaatgt 116  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  24692043 ttttaaccagatatatcaacttttgttgacccaaatttcttttaaaaataggaccggaacgagtaccatatttgttaatttatgtgtattttccaaatgt 24691944  T
Q  117 gtgtttgttgtagaagataaaaagtagaagagagatagatagaaacataaacaaagtgtcactttgagatgtctatattttgattttcaaataacacaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24691943 gtgtttgttgtagaagataaaaagtagaagagagatagatagaaacataaacaaagtgtcac-ttgagatgtctatattttgattttcaaataacacaag 24691845  T
Q  217 aaatgttcaagacttcaactattttgggt---caaaagatgttataaatttgtgctatgtgatgtgagattgtttt 289  Q
    | |||||||||||||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||||    
T  24691844 agatgttcaagacttcaactattttgggtcaacaagagatgttataaatttgtgctatgtgatgtgagattgtttt 24691769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 31654663 - 31654737
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||| ||||    
T  31654663 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattcttttataaataggaccggag 31654737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 6552705 - 6552786
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| ||||||    
T  6552705 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtac 6552786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 33289341 - 33289260
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| ||||||    
T  33289341 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtac 33289260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 54692 - 54612
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  54692 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 54612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 2890242 - 2890162
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  2890242 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2890162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 7785858 - 7785778
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  7785858 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7785778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 39571283 - 39571203
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  39571283 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 39571203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3304358 - 3304278
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||| ||| ||||| |||| |||||    
T  3304358 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 7805779 - 7805699
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||| ||| ||||| |||| |||||    
T  7805779 tgtatttggactgaatttttaactagatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 7805699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12763734 - 12763654
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||| ||| ||||| |||| |||||    
T  12763734 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 12763654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 15888432 - 15888352
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||| ||| || ||||||| |||||    
T  15888432 tgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagaactggagggagta 15888352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 25601080 - 25601000
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  25601080 tgtatttggactgaatttttaactagatacattaacttttgttgacccaaaattctcttataaataggaccggagggagta 25601000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 32211443 - 32211363
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  32211443 tgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 32211363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 43199434 - 43199354
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| ||| ||||| |||| |||||    
T  43199434 tgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 43199354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 44498267 - 44498187
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||| ||| ||||| |||| |||||    
T  44498267 tgtatttggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggagggagta 44498187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 12343220 - 12343146
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| ||| ||||| ||||    
T  12343220 tgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13578907 - 13578980
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactgga 74  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| | |||||||    
T  13578907 tgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatatgactgga 13578980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 7012223 - 7012295
Alignment:
Q  3 tatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 75  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||| ||| ||||| ||||    
T  7012223 tatttggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttataaataggaccggag 7012295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 32114555 - 32114475
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| || | ||| ||| ||||| |||| |||||    
T  32114555 tgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattttcttataaataggaccggagggagta 32114475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 27422240 - 27422309
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggac 70  Q
    ||||||||||||||||||||||| ||||||||  | |||||||||||||||||||| ||| ||| |||||    
T  27422240 tgtatttggactgaatttttaaccagatacattcatttttgttgacccaaatttctcttataaataggac 27422309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8587220 - 8587275
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttct 56  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||| ||| |||||    
T  8587220 tgtattttgactaaatttttaactagatacatcaacttttattgactcaagtttct 8587275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 15688086 - 15688041
Alignment:
Q  25 agatacatcaacttttgttgacccaaatttcttttaaaaagaggac 70  Q
    |||||||||||||||||||||||||| ||||| ||| ||| |||||    
T  15688086 agatacatcaacttttgttgacccaactttctcttataaacaggac 15688041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28463661 - 28463710
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 50  Q
    ||||||||||||||||||| ||| ||||| ||||||||| | ||||||||    
T  28463661 tgtatttggactgaattttgaaccagatatatcaactttcggtgacccaa 28463710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 28463665 - 28463617
Alignment:
Q  27 atacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 75  Q
    |||||||||||||||||||||||| ||||| ||| ||| ||||| ||||    
T  28463665 atacatcaacttttgttgacccaactttctcttataaataggaccggag 28463617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 11795218 - 11795308
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtaccatatttgt 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| |||||||||| |||||  ||||||||    
T  11795218 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggactggagggagtataatatttgt 11795308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 9395400 - 9395480
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  9395400 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9395480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 36563618 - 36563538
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  36563618 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 36563538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37149035 - 37148955
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  37149035 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 41989487 - 41989407
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  41989487 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 41989407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 583039 - 583098
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttctttta 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  583039 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctttta 583098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 23359992 - 23360066
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| ||||    
T  23359992 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggag 23360066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 6126874 - 6126954
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  6126874 tgtatttggactaaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 13103074 - 13103154
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  13103074 tgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13103154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13033101 - 13033169
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagagga 69  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||| ||| ||||    
T  13033101 tgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaatagga 13033169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17025674 - 17025754
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  17025674 tgtatttaaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 17025754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 21575996 - 21576076
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||| |||| ||| ||| ||||| |||| |||||    
T  21575996 tgtatttggactgaatttttaattagatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 21576076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26350430 - 26350350
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||||||||||||||||||||||||||||||||| ||||  |||| |||||||| ||| ||||| |||| |||||    
T  26350430 tgtatttggactgaatttttaactagatacatcaacttttattgattcaaaattcttttataaataggaccggagggagta 26350350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 37642004 - 37642084
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||| |||| ||| ||| ||||| |||| |||||    
T  37642004 tgtatgtggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggagggagta 37642084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 20848124 - 20848203
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||| |||| ||| ||| ||||| |||| |||||    
T  20848124 tgtatttggactgaatttttaactagatacatcaatttttgttg-cccaaaattctcttataaataggaccggagggagta 20848203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4444010 - 4444054
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttga 45  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||    
T  4444010 tgtatttagactgaatttttaaatagatacatcaacttttgttga 4444054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2366418 - 2366363
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttct 56  Q
    ||||||||||||||| ||||||| | |||||| |||| ||||||||||||||||||    
T  2366418 tgtatttggactgaaattttaaccaaatacatgaactcttgttgacccaaatttct 2366363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 966206 - 966272
Alignment:
Q  9 gactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 75  Q
    ||||||||||||||| ||||||||  | ||||||||| |||||||||| ||| ||| ||||||||||    
T  966206 gactgaatttttaaccagatacattcatttttgttgatccaaatttctcttataaataggactggag 966272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 13539944 - 13539909
Alignment:
Q  4 atttggactgaatttttaactagatacatcaacttt 39  Q
    |||| |||||||||||||||||||||||||||||||    
T  13539944 atttagactgaatttttaactagatacatcaacttt 13539909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 35904449 - 35904492
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgac 46  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||||    
T  35904449 tgtatttggactgaatttttaactaaatacat--acttttgttgac 35904492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 9006949 - 9006916
Alignment:
Q  14 aatttttaactagatacatcaacttttgttgacc 47  Q
    |||||| |||||||||||||||||||||||||||    
T  9006949 aattttgaactagatacatcaacttttgttgacc 9006916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 40138868 - 40138811
Alignment:
Q  3 tatttggactgaatttttaactagatacatcaacttttgttgacccaaatttctttta 60  Q
    |||||| |||||||||||||  | |||||||||||||| || |||||| |||||||||    
T  40138868 tatttgaactgaatttttaatcaaatacatcaacttttattaacccaattttctttta 40138811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 39290824 - 39290868
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttga 45  Q
    |||||||||| | ||||||||| ||||||||| ||||||||||||    
T  39290824 tgtatttggattaaatttttaattagatacattaacttttgttga 39290868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 44668173 - 44668084
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtaccatatttgt 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| ||||| |||||||||    
T  44668173 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta-catatttgt 44668084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 27159438 - 27159357
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| ||||||    
T  27159438 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtac 27159357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 14984887 - 14984967
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  14984887 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 14984967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17556803 - 17556883
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||| ||||| |||| |||||    
T  17556803 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaagtttctcttataaataggaccggagggagta 17556883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31842875 - 31842795
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  31842875 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 39402046 - 39401966
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  39402046 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 9981697 - 9981771
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| ||||    
T  9981697 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggag 9981771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 11795986 - 11796063
Alignment:
Q  4 atttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  11795986 atttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 25694369 - 25694449
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  25694369 tgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 25694449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26471145 - 26471065
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||| ||| ||||| |||| |||||    
T  26471145 tgtatttggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 34042746 - 34042826
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| || || |||| |||||    
T  34042746 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagta 34042826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 47216779 - 47216699
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| || || |||| |||||    
T  47216779 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagtaccggagggagta 47216699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 47777561 - 47777481
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  47777561 tgtatttggactgaattttgaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47777481  T

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Target: chr1; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23278081 - 23278026
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttct 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23278081 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 23278026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 44955286 - 44955212
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| ||| ||||| ||||    
T  44955286 tgtatttggactgaatttttaactagatacatcaacttttgttgacctaaaattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 1050941 - 1051018
Alignment:
Q  4 atttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||| ||| ||||| |||| |||||    
T  1050941 atttggactgaatttttaactagatacatcaactttagttgacccaaaattctcttataaataggaccggagggagta 1051018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 47969745 - 47969825
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||| || ||||| ||| ||||| |||| |||||    
T  47969745 tgtatttagactgaatttttaactagatacatcaacttttgttgatccaaaattattttataaataggaccggagggagta 47969825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 47588417 - 47588362
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttct 56  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  47588417 tgtatttggactgaatttttaattagatacatcaacttttgttgacccaaaattct 47588362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 11897104 - 11897184
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||| || ||||||||||||||  ||||||||||||||||||||||||||||||| ||| ||| ||||| |||| |||||    
T  11897104 tgtatctgaactgaatttttaaccggatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagta 11897184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12483708 - 12483628
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  12483708 tgtatttagactgaattttgaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12483628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 11989833 - 11989911
Alignment:
Q  3 tatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||| | ||||||||| |||| ||||| ||||||||||||| ||| ||||| |||| |||||    
T  11989833 tatttggactgaatttttaaccaaatacatcaatttttattgactcaaatttcttttataaataggaccggagggagta 11989911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37552191 - 37552260
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggac 70  Q
    ||||| ||||||||||||||||| ||||||||  | |||||||||||||||||||| ||| ||| |||||    
T  37552191 tgtatctggactgaatttttaaccagatacattcatttttgttgacccaaatttctcttataaataggac 37552260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16448188 - 16448139
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaa 50  Q
    ||||| ||||||||||||| ||| |||||||| |||||||||||||||||    
T  16448188 tgtatctggactgaattttgaaccagatacataaacttttgttgacccaa 16448139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 16448182 - 16448238
Alignment:
Q  25 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||||||||||||||||||| ||||| ||| ||| ||||| |||| |||||    
T  16448182 agatacatcaacttttgttgacccaactttctcttataaataggaccggagggagta 16448238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12213554 - 12213499
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttct 56  Q
    ||||||| || |||||||||||||| ||| ||||| |||||||||||||| |||||    
T  12213554 tgtatttagattgaatttttaactaaataaatcaatttttgttgacccaagtttct 12213499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 17167768 - 17167811
Alignment:
Q  16 tttttaactagatacatcaacttttgttgacccaaatttctttt 59  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||||    
T  17167768 tttttaattagatacattaacttttgttgactcaaatttctttt 17167811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1598460 - 1598415
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacc 47  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||||    
T  1598460 tgtatttggactgaatttttaac-atatacatcaatttttgttgacc 1598415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 571557 - 571601
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttga 45  Q
    ||||||| ||||||||||| |||||| ||||| ||||||||||||    
T  571557 tgtatttagactgaattttgaactaggtacattaacttttgttga 571601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 11897110 - 11897054
Alignment:
Q  25 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||| || ||||| ||| ||| ||||| |||| |||||    
T  11897110 agatacatcaacttttgttgacctaactttctcttataaataggaccggagggagta 11897054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6121973 - 6121892
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| ||||||    
T  6121973 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtac 6121892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 47833661 - 47833742
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| ||||||    
T  47833661 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtac 47833742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 52756725 - 52756794
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggac 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||    
T  52756725 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattcttttataaataggac 52756794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 46797775 - 46797856
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 82  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||| ||| ||||| |||| ||||||    
T  46797775 tgtatttggactgaatttttaactagatatatcaacttttgttgacccaaaattctcttataaataggaccggagggagtac 46797856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3372171 - 3372251
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||| ||| ||||| |||| |||||    
T  3372171 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3422110 - 3422190
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  3422110 tgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 3422190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3993026 - 3993106
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| | ||| |||| |||||    
T  3993026 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataagaccggagggagta 3993106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 5986926 - 5987006
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  5986926 tgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagagagta 5987006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 20538766 - 20538686
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  20538766 tgtatttggactgaatttttaactagatacatcaaattttgttgacccaaaattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33621846 - 33621926
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||| ||| ||||| |||| |||||    
T  33621846 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 33621926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 42797782 - 42797862
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| ||| ||||| |||| |||||    
T  42797782 tgtatttggactgaatttttaactagatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 47838697 - 47838617
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| ||| ||||| |||| |||||    
T  47838697 tgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 47838617  T

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Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 48336313 - 48336393
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||| ||| ||||| |||| |||||    
T  48336313 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 48336393  T

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Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 53337420 - 53337500
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||| ||| ||||| |||| |||||    
T  53337420 tgtatttggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggagggagta 53337500  T

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Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 43900599 - 43900673
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 75  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||| ||| ||||| ||||    
T  43900599 tgtatttggactgaatttttaactagatacatcaacttttgttaacccaaaattctcttataaataggaccggag 43900673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3904763 - 3904683
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  3904763 tgtatttggactgaatttttaactaaatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 3904683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 24704420 - 24704488
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagagga 69  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||| ||||    
T  24704420 tgtatttggactgaatttttaactagatacattaacttttgttgacccaaaattctcttataaatagga 24704488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 41469846 - 41469766
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||| |||| ||| ||| ||||| |||| |||||    
T  41469846 tgtatttggactgaatttttaaatagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 41469766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 51894658 - 51894582
Alignment:
Q  5 tttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  51894658 tttggactgaatttttaaccagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7579360 - 7579415
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttct 56  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  7579360 tgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattct 7579415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 40913269 - 40913190
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagt 80  Q
    |||||||||||||||||||||||| |||| ||||||||||||||| |||||||||| ||| ||| ||||| |||| ||||    
T  40913269 tgtatttggactgaatttttaactggatatatcaacttttgttgatccaaatttctcttataaataggaccggagggagt 40913190  T

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Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41615756 - 41615687
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggac 70  Q
    |||||||||||| |||||||||||| ||||||||||||||||||| |||| ||||| ||| ||| |||||    
T  41615756 tgtatttggacttaatttttaactaaatacatcaacttttgttgatccaattttctcttataaataggac 41615687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33551251 - 33551306
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttct 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||  ||||||| ||||    
T  33551251 tgtattttgactgaatttttaactagatacatcaacttttgtaaacccaaaattct 33551306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 50430498 - 50430447
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaat 52  Q
    |||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  50430498 tgtatttggattgaatttttaaccagatacatcaatttttgttgacccaaat 50430447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 26231627 - 26231668
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgt 42  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  26231627 tgtatttggactgaatttttaactagatatatcaacttttgt 26231668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25855133 - 25855191
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttctttt 59  Q
    ||||||||||||||||||||||| | ||||||| |||||||| ||||||| ||| ||||    
T  25855133 tgtatttggactgaatttttaaccaaatacatcgacttttgtagacccaattttttttt 25855191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17344263 - 17344343
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||| || |||||||||||||   |||||||||||||||||||| |||||||||| ||| ||| | || ||||| |||||    
T  17344263 tgtatctgaactgaatttttaatcggatacatcaacttttgttgatccaaatttctcttataaataagattggagggagta 17344343  T

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Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 4780358 - 4780425
Alignment:
Q  14 aatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||  |||||||| |||||||||||||| |||||||| ||| ||| ||||| |||| |||||    
T  4780358 aatttttaatcagatacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 45478151 - 45478210
Alignment:
Q  10 actgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagagga 69  Q
    ||||||||||||||  ||||||||||||||| |||||||| |||||| ||| ||| ||||    
T  45478151 actgaatttttaaccggatacatcaacttttattgacccacatttctcttataaatagga 45478210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 17236864 - 17236918
Alignment:
Q  27 atacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||||||||||||||||||||| | ||| ||| ||||| |||| |||||    
T  17236864 atacatcaacttttgttgacccaaatttttcttataaataggaccggagagagta 17236918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 8e-24; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 1738527 - 1738447
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  1738527 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 1738447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 7240799 - 7240879
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  7240799 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7240879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 9268806 - 9268886
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  9268806 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9268886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 46840910 - 46840990
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  46840910 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 38441510 - 38441601
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtaccatatttgtt 92  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| ||||  ||||| |||||||||    
T  38441510 tgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggaagtactatatttgtt 38441601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 38063993 - 38063924
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggac 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| |||||    
T  38063993 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggac 38063924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 7482275 - 7482355
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  7482275 tgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7482355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22285749 - 22285829
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  22285749 tgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 23314219 - 23314139
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  23314219 tgtatttggactgaatttttaactagatatatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31319479 - 31319399
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| || || |||| |||||    
T  31319479 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1565809 - 1565754
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttct 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1565809 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 1565754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 33418426 - 33418501
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagc 76  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||| ||| ||||| |||||    
T  33418426 tgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggaccggagc 33418501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 94398 - 94317
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 82  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||  |||| ||||||    
T  94398 tgtatttggacagaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggatcggagggagtac 94317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 36016276 - 36016207
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggac 70  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||| ||| |||||    
T  36016276 tgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggac 36016207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 36583445 - 36583513
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagagga 69  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||    
T  36583445 tgtatttggacttaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagga 36583513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 4790298 - 4790372
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 75  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||| |||| ||| ||| ||||| ||||    
T  4790298 tgtatttggactaaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggag 4790372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 28536831 - 28536751
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||| ||||||||||||||||||||||||||||| |||| ||||| |||| ||| ||| ||||| |||| |||||    
T  28536831 tgtatttggaatgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagta 28536751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 40840199 - 40840130
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggac 70  Q
    |||||||||||||||||||||||||  |||||||||||||||||||  |||||||| ||| ||| |||||    
T  40840199 tgtatttggactgaatttttaactaagtacatcaacttttgttgacaaaaatttctcttataaataggac 40840130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 9575460 - 9575528
Alignment:
Q  2 gtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggac 70  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||| || ||||| ||| ||| |||||    
T  9575460 gtatttagactgaatttttaactagatacatcaagttttgttgaccaaactttctcttataaataggac 9575528  T

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Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 7269476 - 7269416
Alignment:
Q  10 actgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggac 70  Q
    |||||||||||||| |||| |||||||||||||| |||||| ||||| ||| ||| |||||    
T  7269476 actgaatttttaaccagatgcatcaacttttgttaacccaactttctcttataaataggac 7269416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 52
Target Start/End: Original strand, 7661147 - 7661177
Alignment:
Q  22 actagatacatcaacttttgttgacccaaat 52  Q
    |||||||||||||||||||||||||||||||    
T  7661147 actagatacatcaacttttgttgacccaaat 7661177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 2853736 - 2853696
Alignment:
Q  16 tttttaactagatacatcaacttttgttgacccaaatttct 56  Q
    |||||||||||||||||  ||||||||||| ||||||||||    
T  2853736 tttttaactagatacatatacttttgttgatccaaatttct 2853696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 8e-24; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 2830385 - 2830465
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  2830385 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 6330165 - 6330245
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  6330165 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6330245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 8383049 - 8382969
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  8383049 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 9644746 - 9644826
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  9644746 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9644826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 9650763 - 9650843
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  9650763 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9650843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 11572225 - 11572145
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  11572225 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 11572145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 13853673 - 13853593
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  13853673 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13853593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26602373 - 26602453
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  26602373 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 26602453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8099580 - 8099660
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  8099580 tgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 8099660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 28747214 - 28747134
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||| ||| ||||||| || |||||    
T  28747214 tgtatttggactgaatttttaattagatacatcaacttttgttgacccaaaattctcttataaataggactgaagggagta 28747134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 35031081 - 35031007
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 75  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||| ||| ||||| ||||    
T  35031081 tgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggag 35031007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8417873 - 8417804
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggac 70  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||| ||| |||||    
T  8417873 tgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggac 8417804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 33052874 - 33052805
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggac 70  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||| ||| |||||    
T  33052874 tgtatttggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggac 33052805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 6068616 - 6068696
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||| |||| ||| ||| ||||| |||| |||||    
T  6068616 tgtatttggattgaatttttaactagatacatcaacttttgttgactcaaaattctcttataaataggaccggagggagta 6068696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 22896513 - 22896557
Alignment:
Q  2 gtatttggactgaatttttaactagatacatcaacttttgttgac 46  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  22896513 gtatttggactgaatttttaactagatacatcaacttttgttgac 22896557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6143604 - 6143659
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttct 56  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||    
T  6143604 tgtatttggattgaatttttaactagatacatcaacttttgttgtcccaaaattct 6143659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 17992038 - 17992107
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggac 70  Q
    |||||||||| |||||||||||||||||||||| | ||||||||||||||| |||| ||| ||| |||||    
T  17992038 tgtatttggattgaatttttaactagatacatcgatttttgttgacccaaaattctcttataaataggac 17992107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 7597048 - 7596976
Alignment:
Q  10 actgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 82  Q
    |||||||||||||||| |||||||||||||| ||||| |||||||||  || ||| |||| ||||| ||||||    
T  7597048 actgaatttttaactaaatacatcaacttttattgactcaaatttctcctataaataggattggagggagtac 7596976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 3788093 - 3788140
Alignment:
Q  7 tggactgaatttttaactagatacatcaacttttgttgacccaaattt 54  Q
    ||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  3788093 tggactgaattgttaactaaatacatcaacttttgttgacctaaattt 3788140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 8186441 - 8186499
Alignment:
Q  25 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtacc 83  Q
    ||||||||||||||||||||| |||||||||||||| ||| ||||| || | |||||||    
T  8186441 agatacatcaacttttgttgatccaaatttcttttataaataggaccggggggagtacc 8186499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13043808 - 13043850
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgtt 43  Q
    |||||||| | ||||||||||||||||||||||||||||||||    
T  13043808 tgtatttgaattgaatttttaactagatacatcaacttttgtt 13043850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 155
Target Start/End: Original strand, 20809087 - 20809143
Alignment:
Q  99 tgtgtattttccaaatgtgtgtttgttgtagaagataaaaagtagaagagagataga 155  Q
    ||||||||||  |||||||||| ||||||| |||||||||||||  |||||||||||    
T  20809087 tgtgtattttttaaatgtgtgtatgttgtaaaagataaaaagtaagagagagataga 20809143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 8026175 - 8026121
Alignment:
Q  2 gtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttct 56  Q
    |||| ||||||||||||||| |  ||| |||||||||||||||||| ||||||||    
T  8026175 gtatctggactgaatttttatccggatgcatcaacttttgttgacctaaatttct 8026121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 33393213 - 33393171
Alignment:
Q  14 aatttttaactagatacatcaacttttgttgacccaaatttct 56  Q
    |||||| |||||||||||||||||||| ||||| |||||||||    
T  33393213 aattttaaactagatacatcaacttttattgactcaaatttct 33393171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 8e-24; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 10298029 - 10298109
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  10298029 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 10298109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19557132 - 19557052
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  19557132 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 40691076 - 40690996
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  40691076 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 40690996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 48340447 - 48340527
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  48340447 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 49823461 - 49823381
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  49823461 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49823381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 17653762 - 17653836
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| ||||    
T  17653762 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggag 17653836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 37508971 - 37509045
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| ||||    
T  37508971 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggag 37509045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8817466 - 8817397
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggac 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| |||||    
T  8817466 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggac 8817397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 22721981 - 22722050
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggac 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| |||||    
T  22721981 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggac 22722050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 38964442 - 38964523
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| ||| ||||| |||| ||||||    
T  38964442 tgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtac 38964523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 2787912 - 2787832
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||| ||| ||||| |||| |||||    
T  2787912 tgtatttggactgaatttttaactagatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 2787832  T

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Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8437475 - 8437555
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||| ||||| |||| |||||    
T  8437475 tgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctcttataaataggaccggagggagta 8437555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33943012 - 33942944
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagagga 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||| ||||    
T  33943012 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaagtttctcttataaatagga 33942944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 34080110 - 34080030
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  34080110 tgtatttggactgaatttttaacaagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 51406723 - 51406803
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  51406723 tgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 51406803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44785476 - 44785421
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttct 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44785476 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 44785421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 4238644 - 4238718
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| ||| ||||| ||||    
T  4238644 tgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggag 4238718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 9111574 - 9111500
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 75  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| ||||    
T  9111574 tgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggag 9111500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 42507435 - 42507361
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 75  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||| ||| ||||| ||||    
T  42507435 tgtatttggactgaattttgaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggag 42507361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 21295406 - 21295325
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 82  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||| |||| ||| ||| ||||| |||| ||||||    
T  21295406 tgtatttggactgaatttttaattagatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagtac 21295325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 46208080 - 46208160
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||| |||| ||| ||| ||||| |||| |||||    
T  46208080 tgtatttggactgaatttttaaatagatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 46208160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36095760 - 36095705
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttct 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  36095760 tgtatttggactgaatttttaactagatacatcaacttttgttgatccaaaattct 36095705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 42170426 - 42170357
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggac 70  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||| |||| ||| ||| |||||    
T  42170426 tgtatttggagtgaatttttaaccagatacatcaacttttgttgacccaaaattctcttataaataggac 42170357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 6013416 - 6013336
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  6013416 tgtatttggactgaatttttaactagataaatttacttttgttgacccaaaattctcttataaataggaccggagggagta 6013336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 35513523 - 35513591
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagagga 69  Q
    |||||||||||||||||||||||||||||||||| ||||| |||| ||| | |||||||| ||| ||||    
T  35513523 tgtatttggactgaatttttaactagatacatcaccttttattgatccagaattcttttataaatagga 35513591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 34988140 - 34988212
Alignment:
Q  16 tttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtaccatatt 88  Q
    |||||||||||||||||||||| |||||||| ||||| | | ||| ||| ||||| |||| ||||| ||||||    
T  34988140 tttttaactagatacatcaactattgttgactcaaatatttcttataaataggaccggagggagtaacatatt 34988212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 5323272 - 5323310
Alignment:
Q  16 tttttaactagatacatcaacttttgttgacccaaattt 54  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  5323272 tttttaaccaaatacatcaacttttgttgacccaaattt 5323310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 9213572 - 9213516
Alignment:
Q  25 agatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||  |||| ||||||| ||| ||||| |||| |||||    
T  9213572 agatacatcaacttttgttgactaaaatgtcttttataaataggaccggagggagta 9213516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 30790775 - 30790819
Alignment:
Q  95 tttatgtgtattttccaaatgtgtgtttgttgtagaagataaaaa 139  Q
    ||||||||||||||  ||||||||||  |||||||||||||||||    
T  30790775 tttatgtgtattttttaaatgtgtgtaagttgtagaagataaaaa 30790819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 8e-24; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3055608 - 3055688
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  3055608 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 3055688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 6648599 - 6648519
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  6648599 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6648519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9047835 - 9047755
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  9047835 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9047755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12338017 - 12337937
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  12338017 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 13197790 - 13197710
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  13197790 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 15896892 - 15896972
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  15896892 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37990093 - 37990013
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  37990093 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 37990013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 38917602 - 38917522
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  38917602 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 38917522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 41478719 - 41478639
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  41478719 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 41478639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 41492976 - 41492896
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||| |||| |||||    
T  41492976 tgtatttggacagaatttttaactagatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagta 41492896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 44398736 - 44398816
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  44398736 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 44398816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16243863 - 16243794
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggac 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| |||||    
T  16243863 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggac 16243794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 44397597 - 44397666
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggac 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| |||||    
T  44397597 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggac 44397666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 13344534 - 13344614
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||| ||| ||||| |||| |||||    
T  13344534 tgtatttggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 13344614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 15372276 - 15372356
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  15372276 tgtatttggactgaatttttaacgagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 16044397 - 16044316
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagtac 82  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||| ||| ||| ||||| |||| ||||||    
T  16044397 tgtatttgaactgaatttttaactagatacatcaactttagttgacccaaaattctcttataaataggaccggagggagtac 16044316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37666690 - 37666610
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||| ||| ||| ||||| |||| |||||    
T  37666690 tgtatttgaactgaatttttaactagatacatcaactttagttgacccaaaattctcttataaataggaccggagggagta 37666610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12170479 - 12170424
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttct 56  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  12170479 tgtatttggactgaatttttaactaaatacatcaacttttgttgacccaagtttct 12170424  T

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Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 30099262 - 30099182
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||| |||| | | ||| ||||| |||| |||||    
T  30099262 tgtatttggattgaatttttaattagatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagta 30099182  T

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Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 44804658 - 44804616
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgtt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  44804658 tgtatttggactgaatttttaactagatacatcaacttttgtt 44804616  T

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Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4684012 - 4683971
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgt 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4684012 tgtatttggactgaatttttaactagatacatcaacttttgt 4683971  T

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Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 16734833 - 16734907
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggag 75  Q
    ||||| ||||||||||||||||| | ||||||||||||||||| || ||| ||||| ||| ||| ||||||||||    
T  16734833 tgtatctggactgaatttttaaccaaatacatcaacttttgtttactcaactttctcttataaataggactggag 16734907  T

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Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41453109 - 41453149
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttg 41  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  41453109 tgtatttggactgaatttttaacaaaatacatcaacttttg 41453149  T

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Target: scaffold1707 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 1385 - 1453
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagagga 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||    
T  1385 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagga 1453  T

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Target: scaffold0482 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 12910 - 12990
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||| ||| ||||| |||| |||||    
T  12910 tgtatttggactgaatttttaactagatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 12990  T

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Target: scaffold0204 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 23835 - 23915
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||| ||| ||||| |||| |||||    
T  23835 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 23915  T

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Target: scaffold0009 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 49555 - 49635
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||| ||| ||||| |||| |||||    
T  49555 tgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

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Target: scaffold0464 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 6211 - 6131
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaatttcttttaaaaagaggactggagcgagta 81  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| || | ||| ||| ||||| |||| |||||    
T  6211 tgtatgtggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 6131  T

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Target: scaffold0650 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 65 - 20
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgac 46  Q
    |||||||||||| |||||||||| | ||||||||||||||||||||    
T  65 tgtatttggactaaatttttaaccaaatacatcaacttttgttgac 20  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 231383 - 231337
Alignment:
Q  1 tgtatttggactgaatttttaactagatacatcaacttttgttgacc 47  Q
    ||||| ||||||||||||| |||||| || |||||||||||||||||    
T  231383 tgtatctggactgaattttgaactaggtatatcaacttttgttgacc 231337  T

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