View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20235_low_30 (Length: 295)
Name: NF20235_low_30
Description: NF20235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20235_low_30 |
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Alignment Details
Target: chr3 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 13 - 280
Target Start/End: Original strand, 49622070 - 49622337
Alignment:
| Q |
13 |
agggaaaataaagcttttgaaagtgtatcccatatttttagtgcatggaattggatataaagtcctcttatttttgctaaccttgactgccacagtatag |
112 |
Q |
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| T |
49622070 |
agggaaaataaagcttttgaaagtgtatcccatatttttagtgcatggaattggatataaagtcctcttatttttgctaaccttgactgccacagtatag |
49622169 |
T |
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| Q |
113 |
gattttcaatctgacctagtttagttttgatggcatttagggacctatgtgacattacaaaatcctcatgattaaagatgtttttcaatgctttcatgaa |
212 |
Q |
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| T |
49622170 |
gattttcaatctgacctagtttagttttgatggcatttagggacctatgtgacattacaaaatcctcatgattaaagatgtttttcaatgctttcatgaa |
49622269 |
T |
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| Q |
213 |
caaagttctttggtaggtcttgtctttgttagattggcatgtaagagacaaattcacacacaaacact |
280 |
Q |
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| T |
49622270 |
caaagttctttggtaggtcttgtctttgttagattggcatgtaagagacaaattcacacacaaacact |
49622337 |
T |
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