View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20235_low_43 (Length: 256)
Name: NF20235_low_43
Description: NF20235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20235_low_43 |
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Alignment Details
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 35525746 - 35525930
Alignment:
| Q |
18 |
ataattagatagtatacaaaatgaattaatattgcattttaataagaaaattaagaaatcacaagagaaaggtaaaccggtgaattatgtattcaaattc |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35525746 |
ataattagatagtatacaaaatgaattaatattgcattttaataagaaaattaagaaatcacaagagaaaggtaaaccggtgaattatgtattcaaattc |
35525845 |
T |
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| Q |
118 |
caaatgctattctctgtacaaagtctggacgtctcttgctaggcattctaactagaccagtgatctgcagctctgtaattcccct |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35525846 |
caaatgctattctctgtacaaagtctggacgtctcttgctaggcattctaactagaccagtgatctgcagctctgtaattcccct |
35525930 |
T |
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