View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20237_low_13 (Length: 250)
Name: NF20237_low_13
Description: NF20237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20237_low_13 |
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Alignment Details
Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 47583071 - 47583315
Alignment:
| Q |
1 |
ctcaaaggagtgaaattccttgatgtgacggagctttaaaacaccaataattgattaaaatattgtctatcatgttctcattatttcattcttagtttct |
100 |
Q |
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| T |
47583071 |
ctcaaaggagtgaaattccttgatgtgacggagctttaaaacaccaataattgattaaaatattgtctatcatgttctcattatttcattcttagtttct |
47583170 |
T |
|
| Q |
101 |
tgaacttttgtaattgagaaaaaccaagttttacaattgtatttgtcaagggcttttataatttaatacagcattagtttctaaatctaattgagattta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47583171 |
tgaacttttgtaattgagaaaaaccaagttttacaattgtatttgtcaagggcttttataatttaatacagcattagtttctaaatctaattgagattta |
47583270 |
T |
|
| Q |
201 |
gtttcatgaagttggcagtttgaaaattgtttgtttcttctctct |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
47583271 |
gtttcatgaagttggcagtttgaaaattgtttgtttcttgtctct |
47583315 |
T |
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