View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20239_low_2 (Length: 552)

Name: NF20239_low_2
Description: NF20239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20239_low_2
NF20239_low_2
[»] chr4 (9 HSPs)
chr4 (1-534)||(25252271-25252804)
chr4 (1-534)||(25168462-25168999)
chr4 (2-530)||(25180131-25180663)
chr4 (66-353)||(25159966-25160253)
chr4 (434-530)||(25160339-25160435)
chr4 (265-334)||(25000782-25000851)
chr4 (265-311)||(24986312-24986358)
chr4 (96-186)||(25189179-25189269)
chr4 (448-520)||(25039022-25039094)
[»] chr3 (3 HSPs)
chr3 (96-353)||(9213692-9213949)
chr3 (446-521)||(9213394-9213469)
chr3 (465-516)||(8139397-8139448)
[»] chr2 (4 HSPs)
chr2 (427-524)||(42167486-42167583)
chr2 (427-529)||(42156988-42157090)
chr2 (427-529)||(42290330-42290432)
chr2 (96-198)||(42156551-42156653)
[»] chr6 (4 HSPs)
chr6 (266-349)||(29422946-29423029)
chr6 (464-522)||(29422787-29422845)
chr6 (264-346)||(29460042-29460124)
chr6 (466-522)||(29460248-29460304)
[»] chr5 (1 HSPs)
chr5 (126-190)||(30361051-30361115)


Alignment Details
Target: chr4 (Bit Score: 438; Significance: 0; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 438; E-Value: 0
Query Start/End: Original strand, 1 - 534
Target Start/End: Complemental strand, 25252804 - 25252271
Alignment:
Q  1 ctcgttcagcagcctttatatcaagtttgctatctgagagtggcacaaaatagttaataaccaatgttatacctatcacacccttttgagagacttgata 100  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25252804 ctcgttcagcagcctttatatcaagtttattatctgagagtggcacaaaatagttaataaccaatgttatacctatcacacccttttgagagacttgata 25252705  T
Q  101 cttggtcttgtacaaattaacaactgctgcatgagctagaagttgataatgtgcaactaaataaggttctgttccagaatcaccaccggtacaatttgga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  25252704 cttggtcttgtacaaattaacaactgctgcatgagctagaagttgataatgtgcaactaaataaggttctgttccagaatcaccgccggtgcaatttgga 25252605  T
Q  201 ttcaaccaagaagagcatcggcccggtgccatttcaccatttgcatacccatcttgactgtaagtccatggttcattcaaagttatccaatgttttactc 300  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25252604 ttcaaccaagaagagcatcgtcctggtgccatttcaccatttgcatacccatcttgactgtaagtccatggttcattcaaagttatccaatgttttactc 25252505  T
Q  301 tatctccaaatgttttaaagcaaagttccgcataatcttggaaatcttttctgtagtttaaagcatgtaaagatgaatgagaaacatattcataaccatt 400  Q
    |||||||||||||||| ||||||||||||||||| ||||| || |||||||||||||| ||   || ||| |||||||||||||| | |||||||| |||    
T  25252504 tatctccaaatgttttgaagcaaagttccgcatagtcttgaaagtcttttctgtagttgaagatatataatgatgaatgagaaactttttcataactatt 25252405  T
Q  401 taaaccaattaagtgaaaatttgaaattgtatcactcacatgataagagggcttaagaaaccgctatattcatcttctagagtttgaggaagatcccaat 500  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||| |||||||||||||||||||||||||||||||||||    
T  25252404 taaactaattaagtgaaaatttgaaattgtatcactcacatgatgagaggacttaagaatccgccatattcatcttctagagtttgaggaagatcccaat 25252305  T
Q  501 gaaaaagagttacaaatggttgtaaacctgtgac 534  Q
    ||||||||||||||||||||||||||||||||||    
T  25252304 gaaaaagagttacaaatggttgtaaacctgtgac 25252271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 425; E-Value: 0
Query Start/End: Original strand, 1 - 534
Target Start/End: Original strand, 25168462 - 25168999
Alignment:
Q  1 ctcgttcagcagcctttatatcaagtttgctatctgagagtggcacaaaatagttaataaccaatgttatacctatcacacccttttgagagacttgata 100  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25168462 ctcgttcagcagcctttatatcaagtttattatctgagagtggcacaaaatagttaataaccaatgttatacctatcacacccttttgagagacttgata 25168561  T
Q  101 cttggtcttgtacaaattaacaactgctgcatgagctagaagttgataatgtgcaactaaataaggttctgttccagaatcaccaccggtacaatttgga 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||    
T  25168562 cttggtcttgtacaaattaacaactgctgcatgagctagaagttgataatgtgcaactaaataaggttcagttccagaatcaccgccggtgcaatttgga 25168661  T
Q  201 ttcaaccaagaagagcatcggcccggtgccatttcaccatttgcatacccatcttgactgtaagtccatggttcattcaaagttatccaatgttttactc 300  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25168662 ttcaaccaagaagagcatcgaccaggtgccatttcaccatttgcatacccatcttgactgtaagtccatggttcattcaaagttatccaatgttttactc 25168761  T
Q  301 tatctccaaatgttttaaagcaaagttccgcataatcttggaaatcttttct----gtagtttaaagcatgtaaagatgaatgagaaacatattcataac 396  Q
    |||||||||||||||| ||||||||||||||||| ||||| || ||||||||    |||||| ||   || ||| |||||||||||||| | ||||||||    
T  25168762 tatctccaaatgttttgaagcaaagttccgcatagtcttgaaagtcttttctgtacgtagttgaagatatataatgatgaatgagaaactttttcataac 25168861  T
Q  397 catttaaaccaattaagtgaaaatttgaaattgtatcactcacatgataagagggcttaagaaaccgctatattcatcttctagagtttgaggaagatcc 496  Q
     |||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  25168862 tatttaaactaattaagtgaaaatttgaaattgtatcactcacatgatgagaggacttaagaaaccgccatattcatcttctagagtttgaggaagatcc 25168961  T
Q  497 caatgaaaaagagttacaaatggttgtaaacctgtgac 534  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25168962 caatgaaaaagagttacaaatggttgtaaacctgtgac 25168999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 2 - 530
Target Start/End: Original strand, 25180131 - 25180663
Alignment:
Q  2 tcgttcagcagcctttatatcaagtttgctatctgagagtggcacaaaatagttaataaccaatgttatacctatcacacccttttgagagacttgatac 101  Q
    |||||||||||| ||| |||   ||||| |||||||||  |||||| |  ||||||| | |||||||||||||||||||||||||||||||||||||||     
T  25180131 tcgttcagcagcatttttattttgtttgttatctgagaacggcacagaccagttaatgatcaatgttatacctatcacacccttttgagagacttgatat 25180230  T
Q  102 ttggtcttgtacaaattaacaactgctgcatgagctagaagttgataatgtgcaactaaataaggttctgttccagaatcaccaccggtacaatttggat 201  Q
    || |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||    
T  25180231 ttagtcttgtacacattaacagctgctgcatgagctagaagttgataatgtgcaactaaataaggttcggttccagaatctccaccggtgcaatttggat 25180330  T
Q  202 tcaaccaagaagagcatcggcccggtgccatttcaccatttgcatacccatcttgactgtaagtccatggttcattcaaagttatccaatgttttactct 301  Q
    | ||||||||||| ||||| || ||||||||| | ||||||||||| |||| |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  25180331 taaaccaagaagaacatcgacctggtgccattgcgccatttgcatatccattttgactgtaactccatggctcattcaaagttatccaatgttttactct 25180430  T
Q  302 atctccaaatgttttaaagcaaagttccgcataatcttggaaatcttttctgtagtttaaagcatgtaaagatgaatgagaaacatattcataaccattt 401  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||  | | ||| ||||||||||||||||||| |||||||| ||      
T  25180431 atctccaaatgttttaaagcaaagttccgcatagtcttgaaaatcttttctgtagttggaggtatgaaaagatgaatgagaaacattttcataactatag 25180530  T
Q  402 aaaccaatt----aagtgaaaatttgaaattgtatcactcacatgataagagggcttaagaaaccgctatattcatcttctagagtttgaggaagatccc 497  Q
    |||  || |    |  ||||| ||||||||||| ||||||||||||| ||||| |||||||| |||| ||||||||||||||||||||||||||||||||    
T  25180531 aaaataagtttccagatgaaattttgaaattgtgtcactcacatgatgagaggacttaagaagccgccatattcatcttctagagtttgaggaagatccc 25180630  T
Q  498 aatgaaaaagagttacaaatggttgtaaacctg 530  Q
    |||||||||||||||||||||||||||||||||    
T  25180631 aatgaaaaagagttacaaatggttgtaaacctg 25180663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 66 - 353
Target Start/End: Original strand, 25159966 - 25160253
Alignment:
Q  66 gttatacctatcacacccttttgagagacttgatacttggtcttgtacaaattaacaactgctgcatgagctagaagttgataatgtgcaactaaataag 165  Q
    ||||| ||||| ||||||||||||||  ||| ||||||  ||||||||| || |||  |||| ||||| || |||||||| |||||||  || ||||| |    
T  25159966 gttatgcctattacacccttttgagattctttatactttttcttgtacacatcaacggctgcggcatgtgcaagaagttggtaatgtgttaccaaatagg 25160065  T
Q  166 gttctgttccagaatcaccaccggtacaatttggattcaaccaagaagagcatcggcccggtgccatttcaccatttgcatacccatcttgactgtaagt 265  Q
    | ||  |  |||||||||| || |||||||||||||||||||||   ||||| || ||||||||||||   ||||||||||| |||| ||| || ||  |    
T  25160066 gctcgatcgcagaatcaccgccagtacaatttggattcaaccaactggagcaacgacccggtgccattcgcccatttgcatagccattttggctatagct 25160165  T
Q  266 ccatggttcattcaaagttatccaatgttttactctatctccaaatgttttaaagcaaagttccgcataatcttggaaatcttttctg 353  Q
    |||||| || |||||||| | |||||  || |||||||| ||||||   || || |||||||||||||| ||||| ||||||||||||    
T  25160166 ccatggctcgttcaaagtaacccaatacttgactctatcaccaaattccttgaaacaaagttccgcatagtcttgaaaatcttttctg 25160253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 434 - 530
Target Start/End: Original strand, 25160339 - 25160435
Alignment:
Q  434 actcacatgataagagggcttaagaaaccgctatattcatcttctagagtttgaggaagatcccaatgaaaaagagttacaaatggttgtaaacctg 530  Q
    |||||||  |||||||| |||||||| || | ||| || ||||||| ||||||||||||||||||||| |||||||| || |||||||||| |||||    
T  25160339 actcacactataagaggacttaagaagccaccatactcttcttctaaagtttgaggaagatcccaatggaaaagagtcactaatggttgtatacctg 25160435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 265 - 334
Target Start/End: Complemental strand, 25000851 - 25000782
Alignment:
Q  265 tccatggttcattcaaagttatccaatgttttactctatctccaaatgttttaaagcaaagttccgcata 334  Q
    ||||||||||||||||||| ||||||||||| || ||||| ||||||   || ||||||||||| |||||    
T  25000851 tccatggttcattcaaagtaatccaatgtttcaccctatcgccaaattccttgaagcaaagttcagcata 25000782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 311
Target Start/End: Original strand, 24986312 - 24986358
Alignment:
Q  265 tccatggttcattcaaagttatccaatgttttactctatctccaaat 311  Q
    ||||||||||||||||||| ||||||||||| || ||||| ||||||    
T  24986312 tccatggttcattcaaagtaatccaatgtttcaccctatcaccaaat 24986358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 186
Target Start/End: Original strand, 25189179 - 25189269
Alignment:
Q  96 tgatacttggtcttgtacaaattaacaactgctgcatgagctagaagttgataatgtgcaactaaataaggttctgttccagaatcaccac 186  Q
    ||||||||| |||| |||| ||  ||| || |||||||||| || | ||||| ||||| ||||| |||||||||||| ||||||| |||||    
T  25189179 tgatacttgatcttatacacatgtacagcttctgcatgagcaaggatttgattatgtgtaactatataaggttctgtgccagaattaccac 25189269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 520
Target Start/End: Original strand, 25039022 - 25039094
Alignment:
Q  448 agggcttaagaaaccgctatattcatcttctagagtttgaggaagatcccaatgaaaaagagttacaaatggt 520  Q
    |||||||||||||||||| || || |||| || |  ||| |||||||||||||| ||||| || |||||||||    
T  25039022 agggcttaagaaaccgctgtactcgtcttgtaaaacttggggaagatcccaatggaaaagggtcacaaatggt 25039094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 3e-43; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 96 - 353
Target Start/End: Complemental strand, 9213949 - 9213692
Alignment:
Q  96 tgatacttggtcttgtacaaattaacaactgctgcatgagctagaagttgataatgtgcaactaaataaggttctgttccagaatcaccaccggtacaat 195  Q
    |||||||| |||||||||| ||| ||| || | ||||||||||||||||| || ||||  |||| ||| || ||  |  |||||||||||||||| ||||    
T  9213949 tgatactttgtcttgtacacatttacagcttcggcatgagctagaagttggtagtgtgtgactatatagggctcaatcgcagaatcaccaccggtgcaat 9213850  T
Q  196 ttggattcaaccaagaagagcatcggcccggtgccatttcaccatttgcatacccatcttgactgtaagtccatggttcattcaaagttatccaatgttt 295  Q
    ||||||||||||||  ||| || || || |||||||||   ||||||||||| |||| |||||||||| ||||||||||||||||||| | ||||| |||    
T  9213849 ttggattcaaccaactagaacaacgacctggtgccattcgtccatttgcatagccattttgactgtaactccatggttcattcaaagtaacccaatattt 9213750  T
Q  296 tactctatctccaaatgttttaaagcaaagttccgcataatcttggaaatcttttctg 353  Q
     || ||||| |||||    |||||||||||||| ||||| ||||||||||||||||||    
T  9213749 caccctatcaccaaactccttaaagcaaagttcagcatagtcttggaaatcttttctg 9213692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 446 - 521
Target Start/End: Complemental strand, 9213469 - 9213394
Alignment:
Q  446 agagggcttaagaaaccgctatattcatcttctagagtttgaggaagatcccaatgaaaaagagttacaaatggtt 521  Q
    |||||||||||||| || | ||| ||||||||||||||||| || |||||||||||||||||||| || |||||||    
T  9213469 agagggcttaagaagccaccatactcatcttctagagtttgtgggagatcccaatgaaaaagagtcaccaatggtt 9213394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 516
Target Start/End: Complemental strand, 8139448 - 8139397
Alignment:
Q  465 tatattcatcttctagagtttgaggaagatcccaatgaaaaagagttacaaa 516  Q
    ||||||||||||| |||| ||| || |||||||||||||| |||||||||||    
T  8139448 tatattcatcttcaagagcttgtgggagatcccaatgaaagagagttacaaa 8139397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 4e-24; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 427 - 524
Target Start/End: Original strand, 42167486 - 42167583
Alignment:
Q  427 ttgtatcactcacatgataagagggcttaagaaaccgctatattcatcttctagagtttgaggaagatcccaatgaaaaagagttacaaatggttgta 524  Q
    |||||||||| |||| ||||||||||||||||| || ||||| ||||| |||| || ||||||||||||||||||||| |||||||| ||||||||||    
T  42167486 ttgtatcacttacataataagagggcttaagaagccactatactcatcctctaaagcttgaggaagatcccaatgaaatagagttacgaatggttgta 42167583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 427 - 529
Target Start/End: Original strand, 42156988 - 42157090
Alignment:
Q  427 ttgtatcactcacatgataagagggcttaagaaaccgctatattcatcttctagagtttgaggaagatcccaatgaaaaagagttacaaatggttgtaaa 526  Q
    |||||||||| |||  || |||||||||||||| |||| ||| || || |||| |||||||||||||||||||||||| | |||||| |||||||||| |    
T  42156988 ttgtatcacttacacaatgagagggcttaagaagccgccatactcgtcctctaaagtttgaggaagatcccaatgaaataaagttacgaatggttgtaga 42157087  T
Q  527 cct 529  Q
    |||    
T  42157088 cct 42157090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 427 - 529
Target Start/End: Complemental strand, 42290432 - 42290330
Alignment:
Q  427 ttgtatcactcacatgataagagggcttaagaaaccgctatattcatcttctagagtttgaggaagatcccaatgaaaaagagttacaaatggttgtaaa 526  Q
    |||||||||| |||  || |||||||||||||| |||| ||| || |  |||| || ||||||||||||||||||||| | |||||| |||||||||| |    
T  42290432 ttgtatcacttacacaatgagagggcttaagaagccgccatactcgttctctaaagcttgaggaagatcccaatgaaataaagttacgaatggttgtaga 42290333  T
Q  527 cct 529  Q
    |||    
T  42290332 cct 42290330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 198
Target Start/End: Original strand, 42156551 - 42156653
Alignment:
Q  96 tgatacttggtcttgtacaaattaacaactgctgcatgagctagaagttgataatgtgcaactaaataaggttctgttccagaatcaccaccggtacaat 195  Q
    ||||||||  ||||||||| ||  |||||||| |||||||| |||||||| | ||| | |||||  ||||| ||| | || |||||||||||||| ||||    
T  42156551 tgatacttcttcttgtacacatggacaactgcggcatgagcgagaagttggtgatgcgaaactatgtaaggctctttccctgaatcaccaccggtgcaat 42156650  T
Q  196 ttg 198  Q
    |||    
T  42156651 ttg 42156653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000005; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 29423029 - 29422946
Alignment:
Q  266 ccatggttcattcaaagttatccaatgttttactctatctccaaatgttttaaagcaaagttccgcataatcttggaaatcttt 349  Q
    ||||||||||||||  || ||||||||||||||||| || || |||  |||||||||||| |||||||| ||| | ||||||||    
T  29423029 ccatggttcattcagtgtgatccaatgttttactctgtccccgaattctttaaagcaaagctccgcatagtctcgaaaatcttt 29422946  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 522
Target Start/End: Complemental strand, 29422845 - 29422787
Alignment:
Q  464 ctatattcatcttctagagtttgaggaagatcccaatgaaaaagagttacaaatggttg 522  Q
    |||||||||||||| || ||||||||||| |||||||||||||| || ||||| |||||    
T  29422845 ctatattcatcttcaagtgtttgaggaaggtcccaatgaaaaagggtcacaaagggttg 29422787  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 29460042 - 29460124
Alignment:
Q  264 gtccatggttcattcaaagttatccaatgttttactctatctccaaatgttttaaagcaaagttccgcataatcttggaaatc 346  Q
    ||||||||||||||||| || |||||||| ||||| ||||||||||||  |||||| ||||| ||  |||| ||||| |||||    
T  29460042 gtccatggttcattcaatgtgatccaatgctttaccctatctccaaattctttaaaacaaagctctacatagtcttgaaaatc 29460124  T

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Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 29460248 - 29460304
Alignment:
Q  466 atattcatcttctagagtttgaggaagatcccaatgaaaaagagttacaaatggttg 522  Q
    |||||||||||| || || |||||||| ||||||||||||||||| ||||| |||||    
T  29460248 atattcatcttcaagtgtctgaggaaggtcccaatgaaaaagagtcacaaagggttg 29460304  T

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Target: chr5 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 30361115 - 30361051
Alignment:
Q  126 gctgcatgagctagaagttgataatgtgcaactaaataaggttctgttccagaatcaccaccggt 190  Q
    ||||||||||| || ||| | | ||||||||||||||| || ||||| || ||||||||||||||    
T  30361115 gctgcatgagcaaggagtaggtgatgtgcaactaaatatggctctgtccccgaatcaccaccggt 30361051  T

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