View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20239_low_7 (Length: 424)

Name: NF20239_low_7
Description: NF20239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20239_low_7
NF20239_low_7
[»] chr6 (42 HSPs)
chr6 (17-235)||(21354863-21355081)
chr6 (267-424)||(21354508-21354665)
chr6 (128-235)||(23897934-23898041)
chr6 (128-235)||(15528009-15528116)
chr6 (128-235)||(17103318-17103425)
chr6 (128-235)||(26053195-26053302)
chr6 (128-235)||(26073248-26073355)
chr6 (69-159)||(7223779-7223869)
chr6 (128-235)||(19748456-19748563)
chr6 (72-159)||(27614434-27614521)
chr6 (69-159)||(19748597-19748687)
chr6 (69-159)||(11327337-11327427)
chr6 (69-159)||(22498215-22498305)
chr6 (128-224)||(7918249-7918343)
chr6 (69-148)||(3573674-3573754)
chr6 (64-159)||(17543500-17543595)
chr6 (72-159)||(26053074-26053161)
chr6 (72-159)||(26073127-26073214)
chr6 (128-235)||(7223635-7223745)
chr6 (69-159)||(7918125-7918215)
chr6 (69-159)||(17103459-17103549)
chr6 (170-235)||(17543681-17543746)
chr6 (65-158)||(30912177-30912270)
chr6 (338-420)||(21174591-21174673)
chr6 (170-235)||(30912353-30912418)
chr6 (91-159)||(15527907-15527975)
chr6 (128-235)||(17250180-17250286)
chr6 (73-159)||(23898074-23898160)
chr6 (69-159)||(27233074-27233164)
chr6 (74-147)||(31108431-31108504)
chr6 (128-201)||(27233198-27233271)
chr6 (110-210)||(27890521-27890621)
chr6 (187-235)||(22498843-22498891)
chr6 (72-158)||(23506107-23506193)
chr6 (72-149)||(33583444-33583522)
chr6 (69-146)||(17250335-17250411)
chr6 (185-235)||(27614598-27614650)
chr6 (128-167)||(11327461-11327500)
chr6 (12-66)||(21174724-21174778)
chr6 (69-159)||(27890650-27890740)
chr6 (186-231)||(7918338-7918383)
chr6 (69-121)||(8275320-8275372)
[»] chr1 (47 HSPs)
chr1 (130-236)||(25146670-25146776)
chr1 (128-236)||(18304710-18304818)
chr1 (128-235)||(9351962-9352069)
chr1 (128-233)||(42179963-42180069)
chr1 (128-235)||(23528779-23528886)
chr1 (142-235)||(47785982-47786074)
chr1 (129-235)||(13100314-13100419)
chr1 (68-159)||(14074257-14074348)
chr1 (128-235)||(16125354-16125461)
chr1 (128-235)||(9954932-9955041)
chr1 (70-159)||(21846050-21846139)
chr1 (128-235)||(12513404-12513508)
chr1 (77-160)||(9954816-9954899)
chr1 (128-235)||(13276165-13276272)
chr1 (128-235)||(9327113-9327221)
chr1 (69-159)||(13100454-13100544)
chr1 (69-159)||(25146543-25146633)
chr1 (69-158)||(9351838-9351927)
chr1 (71-159)||(16125232-16125320)
chr1 (71-159)||(17197306-17197394)
chr1 (91-159)||(19009745-19009813)
chr1 (171-235)||(32881450-32881514)
chr1 (65-159)||(9128608-9128703)
chr1 (128-235)||(17869649-17869756)
chr1 (170-232)||(9128781-9128843)
chr1 (69-159)||(17055695-17055784)
chr1 (73-159)||(17869529-17869615)
chr1 (108-216)||(12002751-12002859)
chr1 (128-235)||(19009847-19009952)
chr1 (71-159)||(47786122-47786209)
chr1 (128-210)||(21846173-21846255)
chr1 (69-122)||(9954771-9954824)
chr1 (178-235)||(18228323-18228380)
chr1 (69-159)||(12513535-12513625)
chr1 (69-159)||(23528920-23529010)
chr1 (69-159)||(30619206-30619294)
chr1 (69-159)||(41032548-41032638)
chr1 (71-159)||(12002638-12002724)
chr1 (69-158)||(42179846-42179935)
chr1 (91-158)||(9321532-9321599)
chr1 (73-159)||(16434773-16434859)
chr1 (69-159)||(27502130-27502220)
chr1 (64-135)||(13276029-13276097)
chr1 (69-121)||(18304593-18304645)
chr1 (71-159)||(32881584-32881672)
chr1 (92-159)||(22789447-22789514)
chr1 (73-160)||(18337135-18337223)
[»] chr5 (37 HSPs)
chr5 (128-233)||(18843840-18843945)
chr5 (128-235)||(23172327-23172434)
chr5 (69-159)||(41688441-41688531)
chr5 (128-235)||(19579065-19579173)
chr5 (128-235)||(41688565-41688671)
chr5 (70-148)||(18843990-18844068)
chr5 (128-227)||(20321073-20321173)
chr5 (129-235)||(21059057-21059162)
chr5 (69-159)||(15051872-15051962)
chr5 (69-159)||(41427683-41427773)
chr5 (170-235)||(19979722-19979787)
chr5 (128-233)||(18051432-18051534)
chr5 (69-134)||(6852341-6852406)
chr5 (66-159)||(20321207-20321300)
chr5 (69-156)||(19579210-19579298)
chr5 (128-235)||(43234991-43235098)
chr5 (69-147)||(18051308-18051386)
chr5 (68-159)||(27339961-27340052)
chr5 (69-159)||(22645502-22645592)
chr5 (69-159)||(43235132-43235222)
chr5 (128-235)||(38158163-38158260)
chr5 (97-159)||(19042231-19042293)
chr5 (69-159)||(19377867-19377957)
chr5 (68-121)||(26021613-26021666)
chr5 (128-235)||(22645620-22645725)
chr5 (69-117)||(23172219-23172267)
chr5 (143-206)||(19042341-19042404)
chr5 (129-229)||(27340087-27340186)
chr5 (69-119)||(13341472-13341522)
chr5 (126-210)||(26021468-26021551)
chr5 (110-206)||(15051985-15052081)
chr5 (110-155)||(15446402-15446447)
chr5 (68-121)||(19979870-19979923)
chr5 (72-121)||(29270325-29270374)
chr5 (126-210)||(43005756-43005841)
chr5 (69-109)||(34702982-34703022)
chr5 (126-162)||(43234961-43234997)
[»] chr8 (40 HSPs)
chr8 (128-235)||(11879723-11879830)
chr8 (128-235)||(11897139-11897246)
chr8 (129-235)||(19704357-19704461)
chr8 (69-163)||(11879860-11879954)
chr8 (69-163)||(11897276-11897370)
chr8 (144-231)||(5922176-5922263)
chr8 (128-235)||(23142298-23142404)
chr8 (128-235)||(27836363-27836470)
chr8 (130-235)||(6810944-6811048)
chr8 (128-235)||(7489182-7489289)
chr8 (129-235)||(15294793-15294898)
chr8 (129-235)||(15475162-15475267)
chr8 (67-164)||(45403288-45403385)
chr8 (126-235)||(29384209-29384323)
chr8 (128-235)||(32424455-32424564)
chr8 (71-159)||(5922312-5922400)
chr8 (171-235)||(31424286-31424350)
chr8 (68-159)||(24414061-24414152)
chr8 (69-159)||(7489058-7489148)
chr8 (173-235)||(22910146-22910208)
chr8 (69-159)||(29384087-29384177)
chr8 (78-159)||(2040383-2040464)
chr8 (69-146)||(40541595-40541672)
chr8 (171-223)||(3094185-3094237)
chr8 (91-159)||(16752287-16752355)
chr8 (84-147)||(19704247-19704310)
chr8 (141-235)||(45403152-45403247)
chr8 (112-234)||(6292227-6292347)
chr8 (176-235)||(9212202-9212261)
chr8 (68-167)||(19335232-19335330)
chr8 (69-159)||(17647261-17647351)
chr8 (68-145)||(31424442-31424519)
chr8 (128-202)||(15761257-15761332)
chr8 (99-159)||(7262026-7262086)
chr8 (64-158)||(6811084-6811178)
chr8 (69-135)||(23142462-23142528)
chr8 (69-155)||(26879778-26879864)
chr8 (69-158)||(22909979-22910067)
chr8 (115-159)||(15294933-15294977)
chr8 (115-159)||(15475302-15475346)
[»] scaffold0186 (2 HSPs)
scaffold0186 (128-235)||(8566-8671)
scaffold0186 (69-159)||(8705-8795)
[»] chr4 (33 HSPs)
chr4 (128-235)||(5375787-5375895)
chr4 (128-235)||(9770235-9770342)
chr4 (128-235)||(9911310-9911417)
chr4 (69-159)||(9770376-9770466)
chr4 (128-235)||(36120947-36121053)
chr4 (128-235)||(17466202-17466309)
chr4 (162-235)||(13023693-13023766)
chr4 (126-235)||(5361862-5361969)
chr4 (128-235)||(8889351-8889456)
chr4 (70-158)||(23064737-23064825)
chr4 (69-159)||(6346730-6346820)
chr4 (128-235)||(10143022-10143130)
chr4 (69-159)||(5375929-5376019)
chr4 (69-159)||(55476252-55476342)
chr4 (170-235)||(37240380-37240445)
chr4 (104-159)||(8010946-8011001)
chr4 (68-159)||(36121087-36121178)
chr4 (69-159)||(7045208-7045298)
chr4 (128-235)||(23064860-23064969)
chr4 (67-159)||(9911184-9911276)
chr4 (64-159)||(13551442-13551537)
chr4 (78-160)||(13023821-13023903)
chr4 (69-121)||(24719870-24719922)
chr4 (69-156)||(18459406-18459493)
chr4 (128-221)||(8011035-8011129)
chr4 (69-159)||(8889481-8889570)
chr4 (110-210)||(55476123-55476223)
chr4 (69-121)||(27528137-27528189)
chr4 (69-156)||(7452772-7452859)
chr4 (76-210)||(8409729-8409863)
chr4 (72-147)||(46664152-46664227)
chr4 (114-159)||(8367466-8367511)
chr4 (69-121)||(15982743-15982795)
[»] chr7 (49 HSPs)
chr7 (128-235)||(5058652-5058759)
chr7 (129-235)||(4247479-4247585)
chr7 (129-235)||(20570785-20570891)
chr7 (128-235)||(17811470-17811578)
chr7 (128-235)||(44944744-44944851)
chr7 (128-232)||(24725371-24725480)
chr7 (68-159)||(17811612-17811703)
chr7 (68-159)||(24989548-24989639)
chr7 (126-235)||(8329941-8330051)
chr7 (65-158)||(5058793-5058886)
chr7 (61-159)||(5715549-5715643)
chr7 (71-159)||(8304350-8304438)
chr7 (129-235)||(5715412-5715514)
chr7 (128-237)||(11325099-11325209)
chr7 (170-235)||(14055374-14055439)
chr7 (170-235)||(14365402-14365467)
chr7 (170-235)||(24990012-24990077)
chr7 (175-232)||(26281256-26281313)
chr7 (174-235)||(27221541-27221602)
chr7 (129-235)||(8346431-8346539)
chr7 (126-216)||(21846344-21846433)
chr7 (69-159)||(22687042-22687132)
chr7 (69-159)||(25842506-25842596)
chr7 (68-149)||(44944619-44944700)
chr7 (66-159)||(20570657-20570750)
chr7 (126-235)||(8343699-8343806)
chr7 (69-149)||(10285678-10285758)
chr7 (76-159)||(27221678-27221762)
chr7 (100-206)||(8253990-8254096)
chr7 (64-159)||(9685064-9685159)
chr7 (69-155)||(1981100-1981186)
chr7 (69-159)||(11326547-11326637)
chr7 (69-159)||(14055521-14055610)
chr7 (69-159)||(14365549-14365638)
chr7 (69-159)||(39182420-39182510)
chr7 (110-210)||(25842625-25842725)
chr7 (73-159)||(4247620-4247706)
chr7 (141-235)||(6916903-6916996)
chr7 (128-235)||(26617376-26617478)
chr7 (110-210)||(1981217-1981317)
chr7 (68-157)||(26281164-26281251)
chr7 (68-159)||(1977812-1977903)
chr7 (102-220)||(17809000-17809119)
chr7 (62-121)||(21157468-21157527)
chr7 (68-159)||(23618203-23618294)
chr7 (200-235)||(27509914-27509949)
chr7 (70-147)||(4575006-4575083)
chr7 (110-210)||(23618323-23618423)
chr7 (128-197)||(27509311-27509379)
[»] chr3 (50 HSPs)
chr3 (128-235)||(39428025-39428133)
chr3 (128-224)||(28745910-28746006)
chr3 (142-232)||(15515171-15515259)
chr3 (141-235)||(42696970-42697065)
chr3 (76-159)||(3041487-3041570)
chr3 (128-235)||(8156028-8156136)
chr3 (69-159)||(8592174-8592264)
chr3 (69-159)||(28746040-28746130)
chr3 (128-235)||(24620096-24620206)
chr3 (68-159)||(24619971-24620062)
chr3 (65-147)||(22355837-22355919)
chr3 (69-159)||(41671443-41671533)
chr3 (69-133)||(24649524-24649588)
chr3 (69-159)||(8560232-8560322)
chr3 (69-159)||(29067541-29067630)
chr3 (126-236)||(22137399-22137509)
chr3 (128-201)||(25870221-25870294)
chr3 (69-149)||(20766676-20766756)
chr3 (68-159)||(18014255-18014346)
chr3 (128-235)||(29067407-29067507)
chr3 (91-157)||(30727656-30727722)
chr3 (72-146)||(39428184-39428258)
chr3 (128-222)||(22494681-22494781)
chr3 (69-210)||(6860986-6861121)
chr3 (128-230)||(9152883-9152984)
chr3 (126-236)||(21963550-21963663)
chr3 (126-236)||(21985986-21986099)
chr3 (76-210)||(9169808-9169942)
chr3 (68-159)||(17064571-17064662)
chr3 (128-194)||(20756186-20756252)
chr3 (69-159)||(22971073-22971162)
chr3 (69-159)||(25870097-25870187)
chr3 (69-158)||(3449085-3449174)
chr3 (110-210)||(19348688-19348788)
chr3 (70-158)||(19348818-19348906)
chr3 (110-193)||(8560351-8560433)
chr3 (110-216)||(8592293-8592399)
chr3 (73-160)||(13006088-13006174)
chr3 (196-235)||(17064444-17064483)
chr3 (72-147)||(22137553-22137628)
chr3 (69-159)||(10872490-10872580)
chr3 (69-159)||(27090706-27090796)
chr3 (69-193)||(15806223-15806348)
chr3 (128-197)||(22355961-22356030)
chr3 (126-204)||(6136466-6136543)
chr3 (72-159)||(27676700-27676787)
chr3 (76-146)||(21963708-21963778)
chr3 (76-146)||(21986144-21986214)
chr3 (110-193)||(18014143-18014226)
chr3 (110-146)||(20766795-20766831)
[»] chr2 (37 HSPs)
chr2 (129-235)||(35565857-35565960)
chr2 (141-233)||(36429973-36430065)
chr2 (144-235)||(31578127-31578217)
chr2 (126-235)||(1690625-1690734)
chr2 (129-235)||(15588754-15588856)
chr2 (128-235)||(31237875-31237983)
chr2 (69-159)||(20063987-20064077)
chr2 (79-159)||(27523881-27523961)
chr2 (69-159)||(19262091-19262181)
chr2 (69-158)||(21869096-21869185)
chr2 (76-159)||(20034004-20034087)
chr2 (68-159)||(30433079-30433170)
chr2 (69-159)||(1405047-1405137)
chr2 (69-159)||(25538920-25539010)
chr2 (73-159)||(31237755-31237841)
chr2 (64-210)||(19492079-19492227)
chr2 (69-159)||(974602-974693)
chr2 (69-159)||(7302046-7302136)
chr2 (69-159)||(19245853-19245943)
chr2 (185-235)||(30432542-30432592)
chr2 (175-235)||(1404906-1404966)
chr2 (126-221)||(34841717-34841813)
chr2 (110-216)||(21869215-21869321)
chr2 (68-157)||(8428488-8428577)
chr2 (128-192)||(30432981-30433045)
chr2 (110-216)||(974467-974573)
chr2 (108-210)||(20034114-20034216)
chr2 (126-194)||(13502570-13502639)
chr2 (93-162)||(23863288-23863357)
chr2 (141-221)||(31023438-31023519)
chr2 (102-159)||(34578153-34578210)
chr2 (114-210)||(41002160-41002256)
chr2 (71-159)||(15588632-15588720)
chr2 (110-193)||(34578041-34578124)
chr2 (128-167)||(20063914-20063953)
chr2 (128-198)||(19262215-19262285)
chr2 (128-221)||(25539044-25539138)
[»] scaffold0417 (2 HSPs)
scaffold0417 (132-235)||(7358-7461)
scaffold0417 (107-159)||(7268-7320)
[»] scaffold0016 (2 HSPs)
scaffold0016 (69-159)||(56200-56290)
scaffold0016 (185-235)||(58738-58788)
[»] scaffold0079 (1 HSPs)
scaffold0079 (69-158)||(14701-14790)
[»] scaffold0017 (1 HSPs)
scaffold0017 (69-134)||(38302-38367)
[»] scaffold0042 (1 HSPs)
scaffold0042 (126-235)||(93602-93712)
[»] scaffold2084 (1 HSPs)
scaffold2084 (69-159)||(92-182)
[»] scaffold0603 (1 HSPs)
scaffold0603 (128-221)||(8858-8952)
[»] scaffold0526 (2 HSPs)
scaffold0526 (110-210)||(8292-8391)
scaffold0526 (69-159)||(8420-8510)
[»] scaffold0061 (1 HSPs)
scaffold0061 (69-134)||(76084-76149)
[»] scaffold0182 (1 HSPs)
scaffold0182 (91-134)||(24675-24718)
[»] scaffold0027 (1 HSPs)
scaffold0027 (110-210)||(133009-133109)
[»] scaffold0028 (1 HSPs)
scaffold0028 (68-159)||(145852-145943)
[»] scaffold1787 (1 HSPs)
scaffold1787 (357-407)||(1289-1339)
[»] scaffold0510 (1 HSPs)
scaffold0510 (93-159)||(3-69)
[»] scaffold0048 (1 HSPs)
scaffold0048 (69-159)||(61089-61179)


Alignment Details
Target: chr6 (Bit Score: 155; Significance: 4e-82; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 17 - 235
Target Start/End: Complemental strand, 21355081 - 21354863
Alignment:
Q  17 cttttcaaacatagtagatgttactttattatctaagctataagttctaactaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaa 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |  |||||||||||||| |||||| ||||||| || |||||||||||| ||    
T  21355081 cttttcaaacataatagatgttactttattatctaagctataagttctgatcaaggttgtcaaaattgggattttacttcaagttgaaagggaatagaaa 21354982  T
Q  117 aatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattactta 216  Q
    |||| |||||||||||||| ||| |||||||||||||||| ||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21354981 aatcaggactcgtaaaatcgcaatcaaaatcgatggatttcacccaaataatttaatactaaatatatgttataaatggtatatagtcataaattactta 21354882  T
Q  217 gtttataagaaatcgtaaa 235  Q
    |||||||||||||||||||    
T  21354881 gtttataagaaatcgtaaa 21354863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 267 - 424
Target Start/End: Complemental strand, 21354665 - 21354508
Alignment:
Q  267 atagaacctgcatcttcgagtgataccaccagggaggaaaagttgtcgccgcgtcctgaaatagaaatttgaattgacattggtacatcatgatgcacag 366  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21354665 atagaacctgcatcttcgagtgataccaccagggaggaaaagtcgtcgccgcctcctgaaatagaaatttgaattgacattggtacatcatgatgcacag 21354566  T
Q  367 cttggacattaaggttcgccctgctattgctgcattagtgaacaaagtttgtgtggaa 424  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  21354565 cttggacattaaggttcacccttctattgctgcattagtgaacaaagtttgtgtggaa 21354508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 23898041 - 23897934
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| |||||||||||||||||||| ||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  23898041 gtaaaatctcaatcaaaatcgatggattttaccaaaaaaaaaaaatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaa 23897942  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  23897941 atcgtaaa 23897934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 15528009 - 15528116
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| | ||||||||||||||  || |||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  15528009 gtaaaatcgcaatcgaaatcgatggatttcccccaaaaaatttaatactaaatatatgttataaatggtatatagttataaatgacttagtttataagaa 15528108  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  15528109 atcgtaaa 15528116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 17103425 - 17103318
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| ||||||||||||||||||||||||||| |||||| |||||||| || ||||||| ||||||||| ||||| ||||||||||||||||    
T  17103425 gtaaaatcgcaatcaaaatcgatggattttacctaaaaaaattaataataaatatatgtcataaatgatatatagtcgtaaataacttagtttataagaa 17103326  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  17103325 atcgtaaa 17103318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 26053195 - 26053302
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| |||||||||||||||||||| |||||   ||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||    
T  26053195 gtaaaatcgcaatcaaaatcgatggattttaccaaaaaataataatactaactatatgttataaatggtatatagtcataaataacttagtttataagaa 26053294  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  26053295 atcgtaaa 26053302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 26073248 - 26073355
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| |||||||||||||||||||| |||||   ||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||    
T  26073248 gtaaaatcgcaatcaaaatcgatggattttaccaaaaaataataatactaactatatgttataaatggtatatagtcataaataacttagtttataagaa 26073347  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  26073348 atcgtaaa 26073355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 7223869 - 7223779
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||| |||||||||    
T  7223869 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttac 7223779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 19748563 - 19748456
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| ||||||||||||||||||||  ||||   ||||||||||||||  ||||||||| ||||||||| ||||| ||||||||||||||||    
T  19748563 gtaaaatcgcaatcaaaatcgatggattttaccagaaaataataatactaaatatattttataaatgatatatagtcttaaatgacttagtttataagaa 19748464  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  19748463 atcgtaaa 19748456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 72 - 159
Target Start/End: Original strand, 27614434 - 27614521
Alignment:
Q  72 gttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||  ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||    
T  27614434 gttgtcaaaattaggaatttacttcaggtcgaaagggaatagtaaaatcgggactcgtaaaatcacaatcaaaatcgaaggattttac 27614521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 19748687 - 19748597
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||||| | || ||||||| ||||||||||||||||||||||| |||||||||| ||| ||||||||| |||||||||    
T  19748687 aaggttgtcaaaatcgggactttaattcaggttgaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttac 19748597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 11327337 - 11327427
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||||  | |||||||||| |||||||||||||||||||| ||||||||||||| ||| ||||||||| | |||||||    
T  11327337 aaggttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttac 11327427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 22498215 - 22498305
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||| |||| | ||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||| ||  ||||||||    
T  22498215 aaggttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaatcgcaatcaaaattgaacgattttac 22498305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 128 - 224
Target Start/End: Original strand, 7918249 - 7918343
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataa 224  Q
    |||||||| ||| |||||||||||||||||||| |||||||  |||||||||| || |||||||||| ||||||||||||||| ||||| |||||||    
T  7918249 gtaaaatcgcaatcaaaatcgatggattttaccaaaaaaat--aatactaaatttatgttataaatgatatatagtcataaatgacttaatttataa 7918343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 3573674 - 3573754
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaa-gggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcg 148  Q
    ||||||||||||||||||| | ||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||||||||    
T  3573674 aaggttgtcaaaatcgggactttacttcaggtcgaaaagggaatagcaaaatcaggactcgtaaaatcgcaatcaaaatcg 3573754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 64 - 159
Target Start/End: Original strand, 17543500 - 17543595
Alignment:
Q  64 taactaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||| |||||||| ||||| |||| | ||||||||||||||| ||||||||||||||||||||| |||||||  || ||||||||| |||||||||    
T  17543500 taaccaaggttgttaaaattgggactttacttcaggtcgaaaaggaatagcaaaatcgggactcataaaatcgaaatcaaaatcgaaggattttac 17543595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 159
Target Start/End: Original strand, 26053074 - 26053161
Alignment:
Q  72 gttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||| ||| | ||||||||||||||||| ||||||||||| ||||||||||||||| ||| |||||||||  ||||||||    
T  26053074 gttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttac 26053161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 159
Target Start/End: Original strand, 26073127 - 26073214
Alignment:
Q  72 gttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||| ||| | ||||||||||||||||| ||||||||||| ||||||||||||||| ||| |||||||||  ||||||||    
T  26073127 gttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttac 26073214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 7223745 - 7223635
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatacta----aatatacgttataaatggtatatagtcataaattacttagtttata 223  Q
    |||||||| ||| || |||| |||||||||||| ||| ||  ||||||||    |||||| |||||||||||||||||||||||||| ||||||||||||    
T  7223745 gtaaaatcgcaatcagaatcaatggattttacc-aaacaaaataatactaaattaatatatgttataaatggtatatagtcataaatgacttagtttata 7223647  T
Q  224 agaaatcgtaaa 235  Q
    ||||||||||||    
T  7223646 agaaatcgtaaa 7223635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 7918125 - 7918215
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||||  | ||||||||||||||||||||||||| |||| |||||||||||||  ||| ||||||||| | |||||||    
T  7918125 aaggttgtcaaaatcggggctttacttcaggtcgaaagggaatagcagaatcaggactcgtaaaattgcaatcaaaatcgaagaattttac 7918215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 17103549 - 17103459
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||||| | ||||||| |||||||||||||| ||||||| |||||||||||||| ||| ||| | ||| |||||||||    
T  17103549 aaggttgtcaaaatcgggactttacttcaagtcgaaagggaataacaaaatcaggactcgtaaaatcgcaatcaataccgaaggattttac 17103459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 17543681 - 17543746
Alignment:
Q  170 taatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    |||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||| |||||    
T  17543681 taatactaaatatatgttataaatggtatatagtcgtaaatgacttagtttataagaaatagtaaa 17543746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 158
Target Start/End: Original strand, 30912177 - 30912270
Alignment:
Q  65 aactaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 158  Q
    ||||||||||||||||||||| ||| | |||||||| ||||| ||||||||||||||  | |||||||||| |||||||||| || ||||||||    
T  30912177 aactaaggttgtcaaaatcggaattttgcttcaggttgaaagagaatagcaaaatcgataatcgtaaaatctcaaccaaaattgaaggatttta 30912270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 420
Target Start/End: Complemental strand, 21174673 - 21174591
Alignment:
Q  338 aattgacattggtacatcatgatgcacagcttggacattaaggttcgccctgctattgctgcattagtgaacaaagtttgtgt 420  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||| ||||  ||||||||||||  | ||||||| ||||||    
T  21174673 aattgacattggtacatcacgatgcacagcttggtcattaaggttcacccttttattgctgcattttttaacaaagattgtgt 21174591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 30912353 - 30912418
Alignment:
Q  170 taatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    |||||||||||||| || ||||||| |||||| |||||||| ||||||||||||||||||||||||    
T  30912353 taatactaaatatatgtgataaatgatatataatcataaatgacttagtttataagaaatcgtaaa 30912418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 15527907 - 15527975
Alignment:
Q  91 tacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||| |||||||||||||| ||||| |||||| ||| ||||||||| |||||||||    
T  15527907 tacttcaggtcgaaaggaaatagcaaaatcggaactcggaaaatcgcaatcaaaatcgaaggattttac 15527975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 17250286 - 17250180
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    ||||| || ||| ||||||| |||||||||||| |||||   || || ||||||||  ||||||||  ||||||||||||||| ||||||||||||||||    
T  17250286 gtaaattcgcaatcaaaatcaatggattttaccaaaaaacaatagtaataaatatatattataaatt-tatatagtcataaatgacttagtttataagaa 17250188  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  17250187 atcgtaaa 17250180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 23898160 - 23898074
Alignment:
Q  73 ttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||| | |||||||||||| | ||| ||||||||||  | ||||||||||  |||||||||||| |||||||||    
T  23898160 ttgtcaaaatcgggattttgcttcaggtcgaatgagaagagcaaaatcgacaatcgtaaaatcgaaaccaaaatcgaaggattttac 23898074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 27233074 - 27233164
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||||| |  | ||||||||||| |||||||||  |||||||||||||| ||||||| ||| |||||| || |||||||||    
T  27233074 aaggttgtcaaaatcgagcctttacttcaggtcaaaagggaatgacaaaatcgggactcataaaatcgcaatcaaaattgaaggattttac 27233164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 31108504 - 31108431
Alignment:
Q  74 tgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatc 147  Q
    |||||||||| ||| | ||||||||||||||||||||||||||||||| || |||||||| | ||| |||||||    
T  31108504 tgtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaatcgagattcgtaaaaccgcaatcaaaatc 31108431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 27233198 - 27233271
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatata 201  Q
    |||||||| ||| |||||||||| |||||||||  ||||   |||||||||||||| |||||||||||||||||    
T  27233198 gtaaaatcgcaatcaaaatcgatagattttaccataaaacaataatactaaatatatgttataaatggtatata 27233271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 210
Target Start/End: Complemental strand, 27890621 - 27890521
Alignment:
Q  110 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 208  Q
    ||||||||||| |||||||||||||| ||| ||||||||| | ||| |||| ||| |||  |||| ||||||||| ||||||||| | ||||||||||||    
T  27890621 atagcaaaatcaggactcgtaaaatcgcaatcaaaatcga-gaattctaccaaaacaaaaataatgctaaatatatgttataaattgcatatagtcataa 27890523  T
Q  209 at 210  Q
    ||    
T  27890522 at 27890521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 22498843 - 22498891
Alignment:
Q  187 tataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||||||    
T  22498843 tatagatggtatatagtcataaatgacttcgtttataagaaatcgtaaa 22498891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 158
Target Start/End: Complemental strand, 23506193 - 23506107
Alignment:
Q  72 gttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 158  Q
    |||||| |||| |||||| ||||| | |||||||| ||||||||||||||  | | ||||||||||||  |||||||| ||||||||    
T  23506193 gttgtcgaaatggggattttactttaagtcgaaagagaatagcaaaatcgaaaattgtaaaatcacaattaaaatcgaaggatttta 23506107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 33583444 - 33583522
Alignment:
Q  72 gttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaa-aatcgggactcgtaaaatcacaaccaaaatcga 149  Q
    |||||||||||||||||| |||||| |||||||||||  |||||| |||||  | ||||||||||| || |||||||||    
T  33583444 gttgtcaaaatcgggattttacttccggtcgaaaggggttagcaataatcgtaaatcgtaaaatcaaaatcaaaatcga 33583522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 17250411 - 17250335
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaat 146  Q
    |||||| |||||||||||| | ||||||||||||||||| ||| ||  ||| ||||||||||||||| ||| ||||||    
T  17250411 aaggttatcaaaatcgggactttacttcaggtcgaaaggaaatggc-gaattgggactcgtaaaatcgcaatcaaaat 17250335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 27614598 - 27614650
Alignment:
Q  185 gttataaatggtatatagtcataaattact--tagtttataagaaatcgtaaa 235  Q
    |||||||||||||||||||||||||| | |  |||||||||||||||||||||    
T  27614598 gttataaatggtatatagtcataaatgaattatagtttataagaaatcgtaaa 27614650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 11327461 - 11327500
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaa 167  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  11327461 gtaaaatcgcaaccaaaatcgatggattttaccaaaaaaa 11327500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 21174778 - 21174724
Alignment:
Q  12 atgaccttttcaaacatagtagatgttactttattatctaagctataagttctaa 66  Q
    |||| |||||||||| |||||| ||| ||||||||||||||||||| | ||||||    
T  21174778 atgaacttttcaaacttagtagctgtaactttattatctaagctatgatttctaa 21174724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 27890740 - 27890650
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||| ||| || | ||||||| || |||||||| ||| ||||| || ||||||||||||  || |||||| || |||||||||    
T  27890740 aaggttgtcaaattcgagactttacttcaagttgaaagggagtagtaaaattggaactcgtaaaatcgtaatcaaaattgaaggattttac 27890650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 7918338 - 7918383
Alignment:
Q  186 ttataaatggtatatagtcataaattacttagtttataagaaatcg 231  Q
    ||||||||| ||||||||||||||| ||||| ||||||| ||||||    
T  7918338 ttataaatgatatatagtcataaatgacttaatttataaaaaatcg 7918383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 8275320 - 8275372
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcg 121  Q
    |||| |||||||||||| ||| | |||| ||| ||||||||||||||||||||    
T  8275320 aaggctgtcaaaatcggaattttgcttctggttgaaagggaatagcaaaatcg 8275372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 9e-37; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 25146670 - 25146776
Alignment:
Q  130 aaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaat 229  Q
    |||||| ||| |||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  25146670 aaaatcgcaatcaaaatcgatggattttacccaaaaaaattgatactaaatatacgttataaattgtatatagtcataaataacttagtttataagaaat 25146769  T
Q  230 cgtaaat 236  Q
    |||||||    
T  25146770 cgtaaat 25146776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 128 - 236
Target Start/End: Original strand, 18304710 - 18304818
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| |||||||||||||||||| | |||||| ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||    
T  18304710 gtaaaatcgcaatcaaaatcgatggattttatcaaaaaaaattaatactaaatatacgttatgaatggtatatagtcataaatgacttagcttataagaa 18304809  T
Q  228 atcgtaaat 236  Q
    |||||||||    
T  18304810 atcgtaaat 18304818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 9351962 - 9352069
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||||||| ||||||||||| |||||||| |||||| ||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||    
T  9351962 gtaaaatcacaatcaaaatcgatgaattttacccaaaaaaattaatactaaatatatgttataaatggtatatagtcaaaaatgacttagtttataagaa 9352061  T
Q  228 atcgtaaa 235  Q
    ||| ||||    
T  9352062 atcataaa 9352069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 128 - 233
Target Start/End: Original strand, 42179963 - 42180069
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatt-taatactaaatatacgttataaatggtatatagtcataaattacttagtttataaga 226  Q
    |||||| ||||| |||||||||||||||||||| |||||| | |||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  42179963 gtaaaaccacaatcaaaatcgatggattttaccaaaaaaaatataatactatatatatgttataaatggtatatagtcataaatgacttagtttataaga 42180062  T
Q  227 aatcgta 233  Q
    |||||||    
T  42180063 aatcgta 42180069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 23528886 - 23528779
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| |||||||||||||||||||| || ||   ||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  23528886 gtaaaatcgcaatcaaaatcgatggattttacccaataataataataataaatatacgttataaatggtatatagtcataaatgacttcgtttataagaa 23528787  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  23528786 atcgtaaa 23528779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 47786074 - 47785982
Alignment:
Q  142 aaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    |||||||||||||||||||  ||||| | ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  47786074 aaaatcgatggattttaccacaaaaaat-aatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaa 47785982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 13100419 - 13100314
Alignment:
Q  129 taaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaa 228  Q
    ||||||| ||| |||||||||||||||||||| |||||||  ||||||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||    
T  13100419 taaaatcgcaatcaaaatcgatggattttacccaaaaaata-aatactaaatatatgttacaaatggtatatagtcataaatgacttggtttataagaaa 13100321  T
Q  229 tcgtaaa 235  Q
    | |||||    
T  13100320 ttgtaaa 13100314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 14074257 - 14074348
Alignment:
Q  68 taaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||||| || |||| ||||||||||| ||||||||| |||||||||    
T  14074257 taaggttgtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaattggaactcataaaatcacaatcaaaatcgaaggattttac 14074348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 16125354 - 16125461
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| |||||||||||||  ||||| |||||   |||||||||||||| ||||||||||||||||| |||||||| ||||||||||||| ||    
T  16125354 gtaaaatcgcaatcaaaatcgatggacgttacccaaaaataataatactaaatatatgttataaatggtatatattcataaatgacttagtttataaaaa 16125453  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  16125454 atcgtaaa 16125461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 9954932 - 9955041
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatt--taatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 225  Q
    |||||||| ||| ||| |||||||||||||||  |||||| |  ||||||| |||||| |||||||||||||||||||||||||| || |||||||||||    
T  9954932 gtaaaatcgcaatcaagatcgatggattttacacaaaaaaataataatactgaatatatgttataaatggtatatagtcataaatgacctagtttataag 9955031  T
Q  226 aaatcgtaaa 235  Q
    ||||||||||    
T  9955032 aaatcgtaaa 9955041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 70 - 159
Target Start/End: Original strand, 21846050 - 21846139
Alignment:
Q  70 aggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||| ||| | |||| |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||||||||    
T  21846050 aggttgtcaaaatcaggactttactccaggtcgaaagggaatagcaaaatcgggactcttaaaatcgcaatcaaaatcgaaggattttac 21846139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 12513508 - 12513404
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| |||||||||| ||||||||| ||||||| ||||| |||||||  |||||| ||||||||||||| ||||| ||||||||||||||||    
T  12513508 gtaaaatcgcaatcaaaatcgatagattttacc-aaaaaatataatattaaatat--gttatatatggtatatagtcgtaaatgacttagtttataagaa 12513412  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  12513411 atcgtaaa 12513404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 9954816 - 9954899
Alignment:
Q  77 caaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacc 160  Q
    ||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  9954816 caaaatcggaactttacttaaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttacc 9954899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 13276165 - 13276272
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||  ||| ||||||||||||| | |||| |||||   |||||||||||||| |||||||||| ||||||||||||||| ||||| ||||||||||    
T  13276165 gtaaaattgcaatcaaaatcgatggactataccaaaaaataataatactaaatatatgttataaatgatatatagtcataaatgacttaatttataagaa 13276264  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  13276265 atcgtaaa 13276272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 9327113 - 9327221
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtc--ataaattacttagtttataag 225  Q
    |||||||| ||| ||||||||||| |||||||| |||||| | |||||||||||||  |||||||||||||||||||  | |||| ||||||||||||||    
T  9327113 gtaaaatcgcaatcaaaatcgatgaattttacccaaaaaaat-aatactaaatatatattataaatggtatatagtcaaaaaaatgacttagtttataag 9327211  T
Q  226 aaatcgtaaa 235  Q
    ||||||||||    
T  9327212 aaatcgtaaa 9327221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 13100544 - 13100454
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||||| | ||||||| ||||||||||||| |||||||||| |||||||||||| ||| ||||||| | |||||||||    
T  13100544 aaggttgtcaaaatcgggactttacttcaagtcgaaagggaatggcaaaatcggaactcgtaaaatcgcaatcaaaatcaaaggattttac 13100454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 25146543 - 25146633
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||| ||| | |||||||||| ||||||||||||||||||||| | |||||||||| ||| ||||||||| |||||||||    
T  25146543 aaggttgtcaaaatcaggactttacttcaggttgaaagggaatagcaaaatcggaaatcgtaaaatcgcaatcaaaatcgaaggattttac 25146633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 69 - 158
Target Start/End: Original strand, 9351838 - 9351927
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 158  Q
    |||||||||||||||  || | |||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||  ||||||||    
T  9351838 aaggttgtcaaaatcaagactttacttcaggtcgaaagcgaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgtaggatttta 9351927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 16125232 - 16125320
Alignment:
Q  71 ggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||| |||||||| | | ||||||||||||||||||||||| ||||| ||||||||||||||| ||| ||||||||| |||||||||    
T  16125232 ggttgttaaaatcggaactttacttcaggtcgaaagggaatagtaaaattgggactcgtaaaatcgcaatcaaaatcgaaggattttac 16125320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 17197306 - 17197394
Alignment:
Q  71 ggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||| |||||||||||| | ||||||| ||||||||||| |||||||||||| |||||||||||| |||| |||||||| |||||||||    
T  17197306 ggttatcaaaatcgggactttacttcaagtcgaaagggagtagcaaaatcggaactcgtaaaatcgcaactaaaatcgaaggattttac 17197394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 19009745 - 19009813
Alignment:
Q  91 tacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||| | |||||||||    
T  19009745 tacttcagatcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaggattttac 19009813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 32881514 - 32881450
Alignment:
Q  171 aatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||| ||||||||||||||||||    
T  32881514 aatactaaatatatgttataaatggtatatagtcatgaatgacttaatttataagaaatcgtaaa 32881450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 159
Target Start/End: Original strand, 9128608 - 9128703
Alignment:
Q  65 aactaaggttgtcaaaatcgggattatacttcaggtcgaaa-gggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||| || |||||||||||||| ||| ||| ||  ||| |||||||||||||||||||||||||||||||| | ||||||||| |||||||||    
T  9128608 aactaagtttatcaaaatcgggattttacctcaagtaaaaaagggaatagcaaaatcgggactcgtaaaatcacgatcaaaatcgaaggattttac 9128703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 17869649 - 17869756
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| ||||||||||| |||||||| |||||   |||||||||||||| ||| ||||| |||||| || |||||  |||||||||| |||||    
T  17869649 gtaaaatcgcaatcaaaatcgatgaattttaccaaaaaataataatactaaatatatgttgtaaatagtatatggttataaaagacttagtttaaaagaa 17869748  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  17869749 atcgtaaa 17869756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 9128781 - 9128843
Alignment:
Q  170 taatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgt 232  Q
    |||||||||| ||| ||||||||||||||||||||| |||| |||||||||||||||||||||    
T  9128781 taatactaaagatatgttataaatggtatatagtcaaaaataacttagtttataagaaatcgt 9128843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 17055695 - 17055784
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||||  | ||||| |||||||||||| || | ||||||||||||||||||||| ||| ||||||||| |||||||||    
T  17055695 aaggttgtcaaaatcgggtctttactt-aggtcgaaaggggattgtaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 17055784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 17869529 - 17869615
Alignment:
Q  73 ttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||| | || |||||||| |||||||| |||||||||||||| ||||||||| ||| ||||||| | |||||||||    
T  17869529 ttgtcaaaatcgggactctaattcaggtcaaaagggaagagcaaaatcgggacacgtaaaatcgcaatcaaaatcaaaggattttac 17869615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 108 - 216
Target Start/End: Original strand, 12002751 - 12002859
Alignment:
Q  108 gaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcat 206  Q
    |||||||||||||||||||||||||||| ||| ||||||| | ||||| |||| ||| |||  |||| ||||||||| ||||||||| | ||||||||||    
T  12002751 gaatagcaaaatcgggactcgtaaaatcgcaatcaaaatc-aaggattctaccaaaacaaaaataatgctaaatatatgttataaattgcatatagtcat 12002849  T
Q  207 aaattactta 216  Q
    |||| |||||    
T  12002850 aaatgactta 12002859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 19009847 - 19009952
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| |||||||  |||||||||||  |||||   |||| |||||||  ||||||||||||||||||| |||||| ||||| ||||||||||    
T  19009847 gtaaaatcgcaatcaaaatcattggattttaccccaaaaaaaaaatattaaatat--gttataaatggtatatagttataaatgacttaatttataagaa 19009944  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  19009945 atcgtaaa 19009952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 159
Target Start/End: Complemental strand, 47786209 - 47786122
Alignment:
Q  71 ggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||||| | ||| |||| ||||| ||| ||||||||||  | |||||||||||||||||||||||| |||||||||    
T  47786209 ggttgtcaaaatcgggatttt-ctttaggttgaaagagaagagcaaaatcgacaatcgtaaaatcacaaccaaaatcgaaggattttac 47786122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 21846173 - 21846255
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaat 210  Q
    |||||||| ||| |||||| |||| |||||||| |||||| ||||||||||||||| |||||||||  |||||||| ||||||    
T  21846173 gtaaaatcgcaatcaaaatagatgaattttacccaaaaaaattaatactaaatatatgttataaattatatatagttataaat 21846255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 9954771 - 9954824
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgg 122  Q
    ||||||||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  9954771 aaggttgtcaaaatcgggactttacttaaggtcgaaagggaatagcaaaatcgg 9954824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 18228380 - 18228323
Alignment:
Q  178 aatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    |||||| |||||||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  18228380 aatatatgttataaatggtatatagtcataaataacttaatttataagaaatcataaa 18228323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 12513625 - 12513535
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||| |||||| | ||||||||| |||| ||| ||||||||||  | | |||||||| ||||||||||| | |||||||||    
T  12513625 aaggttgtcaaaattgggattttgcttcaggtcaaaagagaagagcaaaatcgacaattgtaaaatcgcaaccaaaatcaaaggattttac 12513535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 23529010 - 23528920
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||| | | || |||||||  ||| |||| || || |||||||||||||||||| ||| ||||||||| |||||||||    
T  23529010 aaggttgtcaaaatcggaactttatttcaggttaaaaaggaacagtaagatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 23528920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 30619294 - 30619206
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||||||| | |||||||||||||| ||| ||||||||||  | |||| ||||| |||| |||||||| |||||||||    
T  30619294 aaggttgtcaaaatcgggatttt-cttcaggtcgaaagagaagagcaaaatcgacaatcgt-aaatcgcaacaaaaatcgaaggattttac 30619206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 41032548 - 41032638
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||| |||||| |||||||||| ||||| ||| |||||||| |  | |||||||||| |||| |||||||| | |||||||    
T  41032548 aaggttgtcaaaatagggattttacttcaggttgaaagagaagagcaaaattgataatcgtaaaatcgcaactaaaatcgaagaattttac 41032638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 12002638 - 12002724
Alignment:
Q  71 ggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||| | || || | ||||||||||| ||||||||| |||||||  ||||||||||  |||||||| |||||||||    
T  12002638 ggttgtcaaaatcgggactttaatttaagtcgaaagggagtagcaaaattgggactc--aaaatcacaataaaaatcgaaggattttac 12002724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 158
Target Start/End: Original strand, 42179846 - 42179935
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 158  Q
    ||||||||||||||| | | | |||||| |||  ||||||||||||| |||||  |||||||||||| ||| ||||||||| ||||||||    
T  42179846 aaggttgtcaaaatcagaaatttacttcgggttaaaagggaatagcataatcgaaactcgtaaaatcgcaatcaaaatcgaaggatttta 42179935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 9321532 - 9321599
Alignment:
Q  91 tacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 158  Q
    |||||||||| ||||   |||||||||||||| |||||||||||| ||| ||||||||| ||||||||    
T  9321532 tacttcaggtagaaaaaaaatagcaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggatttta 9321599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 16434859 - 16434773
Alignment:
Q  73 ttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||| ||||| | ||  ||||| |||||||||||||||||||  | |||||||||  ||| ||||||||| |||||||||    
T  16434859 ttgtcaaaatcaggatttttctctaggtcaaaagggaatagcaaaatcgaaaatcgtaaaattgcaatcaaaatcgaaggattttac 16434773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 27502130 - 27502220
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||||| | ||||||| ||| | |  ||||||||||| || ||||| ||||||  ||| ||||||||| |||||||||    
T  27502130 aaggttgtcaaaatcgggaatttacttcaagtcaacatagaatagcaaaaccgagactcataaaattgcaatcaaaatcgaaggattttac 27502220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 64 - 135
Target Start/End: Original strand, 13276029 - 13276097
Alignment:
Q  64 taactaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatc 135  Q
    |||| ||| ||||||||||||||| | ||||   ||||||||| ||||||||||||| ||||||||||||||    
T  13276029 taaccaagattgtcaaaatcgggactttact---ggtcgaaagagaatagcaaaatcaggactcgtaaaatc 13276097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 18304593 - 18304645
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcg 121  Q
    ||||||||||||||||||| |  |||||||||||||||| || ||||||||||    
T  18304593 aaggttgtcaaaatcgggacttcacttcaggtcgaaaggaaaaagcaaaatcg 18304645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 159
Target Start/End: Complemental strand, 32881672 - 32881584
Alignment:
Q  71 ggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||| |||||||||||||| | |||||| | ||||| ||| ||||||||||  | |||||||||| ||||  ||||||| |||||||||    
T  32881672 ggttttcaaaatcgggattttgcttcagattgaaagagaaaagcaaaatcgacaatcgtaaaatcgcaactgaaatcgaaggattttac 32881584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 22789514 - 22789447
Alignment:
Q  92 acttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||| ||||||| ||| |||||||  | |||||||||||||| ||||||| | |||||||||    
T  22789514 acttcaggtcaaaagggattagaaaaatcgcaaatcgtaaaatcacaatcaaaatcaaaggattttac 22789447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 18337135 - 18337223
Alignment:
Q  73 ttgtcaaaatcgggattatacttcaggtcg-aaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacc 160  Q
    |||| |||||||||||| | |||||||||| |||||||| |||||||| |  | | |||||||  |||  |||||||||||||||||||    
T  18337135 ttgtaaaaatcgggattttgcttcaggtcgaaaagggaaaagcaaaattgaaaatagtaaaattgcaattaaaatcgatggattttacc 18337223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 3e-36; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 128 - 233
Target Start/End: Complemental strand, 18843945 - 18843840
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| |||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  18843945 gtaaaatcgcaatcaaaatcgatggattttacccaaaaaaattaatactaaatatatgttataaatggtatataatcataaatgacttagtttataagaa 18843846  T
Q  228 atcgta 233  Q
    ||||||    
T  18843845 atcgta 18843840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 23172327 - 23172434
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| ||||||||||| |||||||| |||||| |||||| |||||||| |||| ||||||||||||||||||||| ||||||||||||| ||    
T  23172327 gtaaaatcgcaatcaaaatcgatgaattttacccaaaaaaattaatattaaatatatgttacaaatggtatatagtcataaatgacttagtttataaaaa 23172426  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  23172427 atcgtaaa 23172434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 41688441 - 41688531
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||||| | ||||| ||| ||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  41688441 aaggttgtcaaaatcgggactttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaaccaaaatcgaaggattttac 41688531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 19579173 - 19579065
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatt-taatactaaatatacgttataaatggtatatagtcataaattacttagtttataaga 226  Q
    |||||||| ||| |||||||||||||||||||| ||||||   |||||| ||||||| ||||| ||||||| |||||||||||| |||||||||||||||    
T  19579173 gtaaaatcgcaatcaaaatcgatggattttaccaaaaaaaaaataataccaaatatatgttatgaatggtaaatagtcataaatgacttagtttataaga 19579074  T
Q  227 aatcgtaaa 235  Q
    |||||||||    
T  19579073 aatcgtaaa 19579065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 41688565 - 41688671
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| ||||||||||| |||||||| |||||| | ||||||||||||| ||||| ||||||||||||| |||||| | ||||||||||||||    
T  41688565 gtaaaatcgcaatcaaaatcgatgaattttaccaaaaaaaat-aatactaaatatatgttatgaatggtatatagttataaatgatttagtttataagaa 41688663  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  41688664 atcgtaaa 41688671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 70 - 148
Target Start/End: Complemental strand, 18844068 - 18843990
Alignment:
Q  70 aggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcg 148  Q
    |||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  18844068 aggttgtcaaaatcggaactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcg 18843990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 20321173 - 20321073
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttaccta-aaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataaga 226  Q
    |||||||| ||| |||||||||||||||||||| | ||||| |||||| |||||||| |||||||||| ||||| ||||||||| |||||||||||||||    
T  20321173 gtaaaatcgcaatcaaaatcgatggattttacccagaaaaaattaatattaaatatatgttataaatgatatatggtcataaatgacttagtttataaga 20321074  T
Q  227 a 227  Q
    |    
T  20321073 a 20321073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 21059057 - 21059162
Alignment:
Q  129 taaaatcacaaccaaaatcgatggattttac--ctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataaga 226  Q
    ||||||| ||| |||||||||||||||||||  | ||||||   ||||||||||||| |||||||||||| ||||||||||||| |||| ||||||||||    
T  21059057 taaaatcgcaatcaaaatcgatggattttacaacaaaaaaa---aatactaaatatatgttataaatggtttatagtcataaatgacttcgtttataaga 21059153  T
Q  227 aatcgtaaa 235  Q
    |||||||||    
T  21059154 aatcgtaaa 21059162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 15051872 - 15051962
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||| |||||||||||| | ||||||| ||||||| ||| ||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  15051872 aaggttatcaaaatcgggactttacttcaagtcgaaaaggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 15051962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 41427773 - 41427683
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||||| || | ||||||  ||||||||||| ||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  41427773 aaggttgtcaaaatcgagactttacttcgagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 41427683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 19979787 - 19979722
Alignment:
Q  170 taatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    ||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19979787 taataataaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaa 19979722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 128 - 233
Target Start/End: Original strand, 18051432 - 18051534
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| |||||||||||||||| ||| |||||   |||||||||||||| |||||||||  ||||| ||||||||| ||||||||||||||||    
T  18051432 gtaaaatcgcaagcaaaatcgatggatttaaccaaaaaataataatactaaatatatgttataaat--tatat-gtcataaatgacttagtttataagaa 18051528  T
Q  228 atcgta 233  Q
    ||||||    
T  18051529 atcgta 18051534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 6852341 - 6852406
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaat 134  Q
    ||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| ||||||    
T  6852341 aaggttgtcaaaatcgggacttcacttcaggtcgaaagggaatagcaaaatcgggactcataaaat 6852406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 20321300 - 20321207
Alignment:
Q  66 actaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||| |||| | ||||||||||| ||| ||||||| ||||||||||||| ||||||| ||| |||||| || |||||||||    
T  20321300 actaaggttgtcaaaattgggactttacttcaggtcaaaaaggaatagtaaaatcgggactcataaaatcgcaatcaaaattgaaggattttac 20321207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 19579298 - 19579210
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaat-agcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattt 156  Q
    ||||| ||||||||||||||| ||||||||||||||||||| | |||||||| ||||||| ||||||| ||| ||||||||| ||||||    
T  19579298 aaggtagtcaaaatcgggattttacttcaggtcgaaagggagtaagcaaaattgggactcataaaatcgcaatcaaaatcgaaggattt 19579210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 43235098 - 43234991
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| |||||||||| ||||||||| ||| |   ||||| ||| |||| |||||||||||| ||||| ||||||| |||||||| |||||||    
T  43235098 gtaaaatcgcaatcaaaatcgattgattttaccaaaagataataatagtaagtatatgttataaatggtttatagacataaatgacttagttgataagaa 43234999  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  43234998 atcgtaaa 43234991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 147
Target Start/End: Original strand, 18051308 - 18051386
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatc 147  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||| |||| ||| |||||||    
T  18051308 aaggtagtcaaaatcgggattttactttaggtcgaaagggaatagaaaaatcgggacttgtagaatcgcaatcaaaatc 18051386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 27339961 - 27340052
Alignment:
Q  68 taaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||||||| | | ||||||| || ||||||||||||||||||||  | |||| ||||| ||| ||||||||| |||||||||    
T  27339961 taaggttgtcaaaatcggaactttacttcaagttgaaagggaatagcaaaatcgaaaatcgtgaaatcgcaatcaaaatcgaaggattttac 27340052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 22645502 - 22645592
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||| |||| | | |||||| |||| ||||||||||||||||| | ||||||||||||  ||| ||||||||| |||||||||    
T  22645502 aaggttgtcaaagtcggaactttacttctggtctaaagggaatagcaaaattgagactcgtaaaattgcaatcaaaatcgaaggattttac 22645592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 43235222 - 43235132
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||| |||| | ||||||  | |||||||||||||||||||| | |||| ||||||| ||| ||||||||| |||||||||    
T  43235222 aaggttgtcaaaattgggactttacttcgagacgaaagggaatagcaaaatcagtactcataaaatcgcaatcaaaatcgaaggattttac 43235132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 38158163 - 38158260
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||||||| |||||| ||||||||||||| ||||||  |||||||||||||         ||| ||||||||||||||| | ||||||||||||||    
T  38158163 gtaaaatcacaatcaaaattgatggattttacc-aaaaaaaataatactaaatat---------atgttatatagtcataaatgatttagtttataagaa 38158252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 19042231 - 19042293
Alignment:
Q  97 aggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||| ||||||||||| |||||||||||||||||||  |||||||| | |||||||    
T  19042231 aggtcgaaaggaaatagcaaaatagggactcgtaaaatcacaattaaaatcgaagaattttac 19042293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 19377957 - 19377867
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||| || | | | ||||| | || |||||||||||||||||||| || ||||||| | |||| ||||||||| |||||||||    
T  19377957 aaggttgtcaaagtcagtactttactttaagtggaaagggaatagcaaaatcgagaatcgtaaatttacaatcaaaatcgaaggattttac 19377867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 26021666 - 26021613
Alignment:
Q  68 taaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcg 121  Q
    |||||||||||||||||||||| | ||||||| | |||||||| ||||||||||    
T  26021666 taaggttgtcaaaatcgggattttgcttcaggccaaaagggaagagcaaaatcg 26021613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 22645620 - 22645725
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaattt-aatactaaatatacgttataaatggtatatagtcataaattac-ttagtttataag 225  Q
    |||||||||||| ||||||||||| |||||||| ||||||    || |||||| ||| |||||    ||||||||||||||||| || ||||||||||||    
T  22645620 gtaaaatcacaatcaaaatcgatgaattttaccaaaaaaaaaacaagactaaacatatgttat----ggtatatagtcataaatgacattagtttataag 22645715  T
Q  226 aaatcgtaaa 235  Q
    |||| |||||    
T  22645716 aaattgtaaa 22645725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 23172219 - 23172267
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaa 117  Q
    ||||||||||||||||| | | |||||||||| ||||||||||||||||    
T  23172219 aaggttgtcaaaatcggaactttacttcaggttgaaagggaatagcaaa 23172267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 19042341 - 19042404
Alignment:
Q  143 aaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcat 206  Q
    |||| ||||||||||| | |||||  ||||||||||||||| |||| |||| ||||||||||||    
T  19042341 aaattgatggattttatccaaaaagattaatactaaatatatgttagaaattgtatatagtcat 19042404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 27340087 - 27340186
Alignment:
Q  129 taaaatcacaaccaaaatcgatggattttacctaaaaa--att-taatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 225  Q
    ||||||| ||| |||||||||| ||||||||  |||||  ||  |||||||||||||| |||| ||||||||||||||    ||| ||||||||||||||    
T  27340087 taaaatcgcaatcaaaatcgatagattttacaaaaaaataataataatactaaatatatgttacaaatggtatatagt----aatgacttagtttataag 27340182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 119
Target Start/End: Original strand, 13341472 - 13341522
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaat 119  Q
    ||||||||||||||||||||| | |||||  |||||||||||||| |||||    
T  13341472 aaggttgtcaaaatcgggattttgcttcaaatcgaaagggaatagaaaaat 13341522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 26021551 - 26021468
Alignment:
Q  126 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatt-taatactaaatatacgttataaatggtatatagtcataaat 210  Q
    ||||||||||||||  |||  ||||| |||||||| ||| |||  |||| ||||||||| ||||||||| ||||||||||||||||    
T  26021551 tcgtaaaatcacaattaaa--cgatgcattttaccaaaacaataataatgctaaatatatgttataaattgtatatagtcataaat 26021468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 206
Target Start/End: Original strand, 15051985 - 15052081
Alignment:
Q  110 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcat 206  Q
    |||||||| |||| |||||||||||| ||| ||||||||| ||||| |||| ||| |||  ||||  |||||||| ||||||||| | ||||||||||    
T  15051985 atagcaaagtcggaactcgtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatagtcat 15052081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 15446447 - 15446402
Alignment:
Q  110 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatt 155  Q
    ||||||||||||  |||||||||||| ||| |||||||||||||||    
T  15446447 atagcaaaatcgaaactcgtaaaatcgcaatcaaaatcgatggatt 15446402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 19979923 - 19979870
Alignment:
Q  68 taaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcg 121  Q
    |||||| ||||||||||||||| | ||||||||| |||| ||| ||||||||||    
T  19979923 taaggtggtcaaaatcgggattttgcttcaggtcaaaagagaagagcaaaatcg 19979870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 29270374 - 29270325
Alignment:
Q  72 gttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcg 121  Q
    |||||||||||||||||| || |||||||| |||| ||||| ||||||||    
T  29270374 gttgtcaaaatcgggattttatttcaggtcaaaagagaatatcaaaatcg 29270325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 43005756 - 43005841
Alignment:
Q  126 tcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataaat 210  Q
    |||||||||| |||  |||||||||||||| |||| ||| |||  |||| ||||||||| ||||||||| ||||| | ||||||||    
T  43005756 tcgtaaaatcgcaattaaaatcgatggattgtaccaaaacaaaaataatgctaaatatatgttataaattgtatacactcataaat 43005841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 34703022 - 34702982
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaaggga 109  Q
    |||||||||||||||| |||| ||||||| |||||||||||    
T  34703022 aaggttgtcaaaatcgagattttacttcaagtcgaaaggga 34702982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 43234997 - 43234961
Alignment:
Q  126 tcgtaaaatcacaaccaaaatcgatggattttaccta 162  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  43234997 tcgtaaaatcacaatcaaaatcgatggatttttccta 43234961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 5e-35; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 11879830 - 11879723
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||  |||||||||||||||||||| |||||   |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11879830 gtaaaatcgcattcaaaatcgatggattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaattacttagtttataagaa 11879731  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  11879730 atcgtaaa 11879723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 11897246 - 11897139
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||  |||||||||||||||||||| |||||   |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11897246 gtaaaatcgcattcaaaatcgatggattttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaattacttagtttataagaa 11897147  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  11897146 atcgtaaa 11897139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 19704357 - 19704461
Alignment:
Q  129 taaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaa 228  Q
    ||||||||||| |||||||||||||||||||||||||||   || |||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||    
T  19704357 taaaatcacaatcaaaatcgatggattttacctaaaaaaa--aaaactaaatatatgttacaaatggtatatagtcataaataacttggtttataagaaa 19704454  T
Q  229 tcgtaaa 235  Q
    |||||||    
T  19704455 tcgtaaa 19704461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 11879954 - 11879860
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaa 163  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| |||||||||||| ||| ||||||||| |||||||||||||    
T  11879954 aaggttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaa 11879860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 11897370 - 11897276
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaa 163  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| |||||||||||| ||| ||||||||| |||||||||||||    
T  11897370 aaggttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaa 11897276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 5922263 - 5922176
Alignment:
Q  144 aatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcg 231  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||| || || ||||||||||||||    
T  5922263 aatcgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcg 5922176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 23142404 - 23142298
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| ||||||||||||| |||||| |||| | | ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  23142404 gtaaaatcgcaatcaaaatcgatggactttaccaaaaataat-aatactaaatatatgttataaatggtatatagtcataaatgacttaatttataagaa 23142306  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  23142305 atcgtaaa 23142298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 27836363 - 27836470
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||||||| ||||||||||||||||||||   ||||   ||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||    
T  27836363 gtaaaatcacaatcaaaatcgatggattttaccagcaaaaaaaaatactaaatacatgttataaatggtatatagtcataaatgacttagtttataagaa 27836462  T
Q  228 atcgtaaa 235  Q
    || |||||    
T  27836463 attgtaaa 27836470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 6811048 - 6810944
Alignment:
Q  130 aaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaat 229  Q
    |||||| ||| |||||||||||||||||||| |||||| | ||||||||||||| |||||||||| |||||||| |||||| |||||||||||| |||||    
T  6811048 aaaatcgcaatcaaaatcgatggattttaccaaaaaaaat-aatactaaatatatgttataaatgatatatagttataaatgacttagtttatatgaaat 6810950  T
Q  230 cgtaaa 235  Q
    ||||||    
T  6810949 cgtaaa 6810944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 7489182 - 7489289
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| ||||||||||| |||||||  |||||  ||||||||||||||| |||||||||| ||||||||||||||| ||||| ||||||||||    
T  7489182 gtaaaatcgcaatcaaaatcgatgaattttactcaaaaatattaatactaaatatatgttataaatgatatatagtcataaatgacttaatttataagaa 7489281  T
Q  228 atcgtaaa 235  Q
    ||| ||||    
T  7489282 atcataaa 7489289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 15294898 - 15294793
Alignment:
Q  129 taaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaa 228  Q
    ||||||| ||| ||||||| ||||||||||||||||||| | ||||||||||||| |||| |||| || ||||||||||||| |||||||||||||||||    
T  15294898 taaaatcgcaagcaaaatccatggattttacctaaaaaaat-aatactaaatatatgttacaaatagtgtatagtcataaatgacttagtttataagaaa 15294800  T
Q  229 tcgtaaa 235  Q
    | |||||    
T  15294799 ttgtaaa 15294793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 15475267 - 15475162
Alignment:
Q  129 taaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaa 228  Q
    ||||||| ||| ||||||| ||||||||||||||||||| | ||||||||||||| |||| |||| || ||||||||||||| |||||||||||||||||    
T  15475267 taaaatcgcaagcaaaatccatggattttacctaaaaaaat-aatactaaatatatgttacaaatagtgtatagtcataaatgacttagtttataagaaa 15475169  T
Q  229 tcgtaaa 235  Q
    | |||||    
T  15475168 ttgtaaa 15475162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 67 - 164
Target Start/End: Complemental strand, 45403385 - 45403288
Alignment:
Q  67 ctaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa 164  Q
    ||||| ||||||||||||||| | || |||| ||||||||||||||||||||||| ||||||||||||| ||| ||||||||| ||||||||| ||||    
T  45403385 ctaagcttgtcaaaatcgggactttatttcacgtcgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttacttaaa 45403288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 29384209 - 29384323
Alignment:
Q  126 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatt-----taatactaaatatacgttataaatggtatatagtcataaattacttagttt 220  Q
    |||||||||| ||| |||||||||||||||||||| ||||||       |||||||||||||| |||||||||||||||||||||||||| | ||  |||    
T  29384209 tcgtaaaatcgcaatcaaaatcgatggattttaccaaaaaaaaaaatactaatactaaatatatgttataaatggtatatagtcataaatgaattgtttt 29384308  T
Q  221 ataagaaatcgtaaa 235  Q
    |||||||||||||||    
T  29384309 ataagaaatcgtaaa 29384323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 32424564 - 32424455
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatac--gttataaatggtatatagtcataaattacttagtttataag 225  Q
    |||||||| |||  ||||||||| ||||||| | | |||| |||||||||||||||   |||||||||||||||||||||||||| ||||||| |||||     
T  32424564 gtaaaatcgcaataaaaatcgatagattttatccagaaaaattaatactaaatatatatgttataaatggtatatagtcataaatgacttagtatataat 32424465  T
Q  226 aaatcgtaaa 235  Q
    ||||||||||    
T  32424464 aaatcgtaaa 32424455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 71 - 159
Target Start/End: Complemental strand, 5922400 - 5922312
Alignment:
Q  71 ggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||| | ||  ||| |||| ||| ||||||||| |||||||||    
T  5922400 ggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttac 5922312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 31424350 - 31424286
Alignment:
Q  171 aatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    ||||||||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  31424350 aatactaaatatatgttataattggtatatagtcataaacgacttagtttataagaaatcgtaaa 31424286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 24414061 - 24414152
Alignment:
Q  68 taaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||| || | | ||||||| |||||||||||||||||||||   ||||||||||||| ||| ||||||||| |||||||||    
T  24414061 taaggttgtcaaaattggaactttacttcatgtcgaaagggaatagcaaaatttagactcgtaaaatcgcaatcaaaatcgaaggattttac 24414152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 7489058 - 7489148
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||| ||| | ||||||| ||||||||| |||||||||||  |||||||||||||| ||| ||||||||  |||||||||    
T  7489058 aaggttgtcaaaatcaggactttacttcaagtcgaaaggaaatagcaaaattaggactcgtaaaatcgcaatcaaaatcggaggattttac 7489148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 22910146 - 22910208
Alignment:
Q  173 tactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    |||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  22910146 tactaagtatatgttataaatggtatatagtcataaattacttaatttataagaaatcttaaa 22910208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 29384087 - 29384177
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||||||| | ||||||||||||||  || || |||||||  | |||||||||| ||||||||||||| |||||||||    
T  29384087 aaggttgtcaaaatcgggattttgcttcaggtcgaaagaaaagagaaaaatcgacaatcgtaaaatcgcaaccaaaatcgaaggattttac 29384177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 2040464 - 2040383
Alignment:
Q  78 aaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||| | ||||||| |||||||| || |||||||||||| |||||||||||| ||| ||||||||| |||||||||    
T  2040464 aaaatcgggactttacttcaagtcgaaagagagtagcaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttac 2040383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 40541595 - 40541672
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaat 146  Q
    |||||| |||||||||||| | ||||||| ||||||||| | ||||||||||||||||||||||||| ||| ||||||    
T  40541595 aaggttatcaaaatcgggactttacttcaagtcgaaaggaagtagcaaaatcgggactcgtaaaatcgcaatcaaaat 40541672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 3094185 - 3094237
Alignment:
Q  171 aatactaaatatacgttataaatggtatatagtcataaattacttagtttata 223  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  3094185 aatactaaatatatgttataaatggtatatagtcataaatgacttagtttata 3094237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 16752355 - 16752287
Alignment:
Q  91 tacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||||| ||| ||||||||| |||||||||    
T  16752355 tacttcaagtcgaaagggagtagcaaaattgggactcgtaaaatcgcaaacaaaatcgaaggattttac 16752287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 19704247 - 19704310
Alignment:
Q  84 gggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatc 147  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||    
T  19704247 gggattttacttcaagtccaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatc 19704310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 141 - 235
Target Start/End: Complemental strand, 45403247 - 45403152
Alignment:
Q  141 caaaatcgatggattttacctaaaaaatt-taatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    |||||||||| ||||||||| |||||||  ||||| |||||||| ||||||||||||||||  |||||||| |||| ||| ||||| |||||||||    
T  45403247 caaaatcgatagattttaccaaaaaaataataatattaaatatatgttataaatggtatattatcataaatgacttggttgataaggaatcgtaaa 45403152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 6292227 - 6292347
Alignment:
Q  112 agcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaatt 211  Q
    ||||||||||  | |||| ||||| |||  ||||| ||||||||||| |  |||||| ||||| ||||||||  |||||||||||||||||| ||||||     
T  6292227 agcaaaatcgacaatcgttaaatcgcaattaaaattgatggattttatc--aaaaatataatattaaatatattttataaatggtatatagtgataaatg 6292324  T
Q  212 acttagtttataagaaatcgtaa 234  Q
    |||||| |||||| |||| ||||    
T  6292325 acttagattataataaattgtaa 6292347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 9212202 - 9212261
Alignment:
Q  176 taaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    |||||||| |||||||||||||||| ||||||||| | ||||||||||||||||| ||||    
T  9212202 taaatataggttataaatggtatatggtcataaatgatttagtttataagaaatcttaaa 9212261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 19335330 - 19335232
Alignment:
Q  68 taaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaaaaa 167  Q
    |||||||||||||||||||| | ||||| ||||| ||| | ||||| ||||| || |||| || |||||||| |||||||||||||||||| | ||||||    
T  19335330 taaggttgtcaaaatcgggactttactttaggtcaaaaagaaatagtaaaattggaactc-tacaatcacaatcaaaatcgatggattttatcaaaaaaa 19335232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 17647351 - 17647261
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||| |||||||||||| | |||||||||||||| ||  ||||||||||  | || ||||||| ||| ||||||||| |||||||||    
T  17647351 aaggttgttaaaatcgggattttgcttcaggtcgaaagagatgagcaaaatcgacaatcataaaatcgcaatcaaaatcgaaggattttac 17647261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 145
Target Start/End: Complemental strand, 31424519 - 31424442
Alignment:
Q  68 taaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaa 145  Q
    ||||||||||||||||| |||| |||||||||||||||| ||  ||||||||||  | |||||||||| ||| |||||    
T  31424519 taaggttgtcaaaatcgagattttacttcaggtcgaaagagatgagcaaaatcgacaatcgtaaaatcgcaatcaaaa 31424442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 15761257 - 15761332
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatag 202  Q
    |||||||| ||| |||||||||||||||||||| ||| |||  |||| ||||||||| ||||||||| ||||||||    
T  15761257 gtaaaatcgcaatcaaaatcgatggattttaccaaaacaaaaataatgctaaatatatgttataaattgtatatag 15761332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 7262086 - 7262026
Alignment:
Q  99 gtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||| | ||||||||||||||||||||||||| ||| ||||||  | |||||||||    
T  7262086 gtcgaaaggaagtagcaaaatcgggactcgtaaaatcgcaatcaaaattaaaggattttac 7262026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 6811178 - 6811084
Alignment:
Q  64 taactaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 158  Q
    |||| ||||||||||||||||| | | |  ||||  ||||||| ||| ||||||||||  | |||||||||| ||||||||||||| | ||||||    
T  6811178 taaccaaggttgtcaaaatcggaactttgtttcaaatcgaaagagaagagcaaaatcgacaatcgtaaaatcgcaaccaaaatcgaagaatttta 6811084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 23142528 - 23142462
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatc 135  Q
    ||||||||||||||| ||| | || ||||  ||||||||||||||||||| ||| | ||||||||||    
T  23142528 aaggttgtcaaaatcaggactttatttcaattcgaaagggaatagcaaaaccggtaatcgtaaaatc 23142462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 26879864 - 26879778
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatt 155  Q
    |||||||||||| ||| |||| || ||||||| ||||||||  |||||||||   | |||||||||| ||| |||||| ||||||||    
T  26879864 aaggttgtcaaagtcgtgattttagttcaggttgaaagggatcagcaaaatcaaaaatcgtaaaatcgcaatcaaaattgatggatt 26879778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 158
Target Start/End: Original strand, 22909979 - 22910067
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 158  Q
    ||||||||||||||| ||||| ||| ||| |||||||| ||| || |||||||  | |||||||||| ||||| |||| || ||||||||    
T  22909979 aaggttgtcaaaatc-ggattttacatcatgtcgaaagagaagagaaaaatcgacaatcgtaaaatcgcaaccgaaattgaaggatttta 22910067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 15294977 - 15294933
Alignment:
Q  115 aaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||| ||||||| ||| ||||||||| |||||||||    
T  15294977 aaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttac 15294933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 15475346 - 15475302
Alignment:
Q  115 aaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||| ||||||| ||| ||||||||| |||||||||    
T  15475346 aaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttac 15475302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 8671 - 8566
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| |||||||||||||||||||| |||||||  ||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  8671 gtaaaatcgcaatcaaaatcgatggattttaccaaaaaaat--aatactaaatatatggtataaatggtatatagtcataaatgacttagtttataagaa 8574  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  8573 atcgtaaa 8566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 8795 - 8705
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||| |||||||||||| | |||||||||||||||||||||| ||||||||| |||||||||||| ||| |||||| || |||||||||    
T  8795 aaggttctcaaaatcgggactttacttcaggtcgaaagggaataacaaaatcggaactcgtaaaatcgcaatcaaaattgaaggattttac 8705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 3e-33; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 5375895 - 5375787
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaat-ttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataaga 226  Q
    |||||||||||| |||||||||||||||||||| ||||||  ||||||||||||||| |||||||||| ||||| ||||||||| |||||||||||||||    
T  5375895 gtaaaatcacaatcaaaatcgatggattttacccaaaaaaaattaatactaaatatatgttataaatgatatatggtcataaatgacttagtttataaga 5375796  T
Q  227 aatcgtaaa 235  Q
    |||||||||    
T  5375795 aatcgtaaa 5375787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 9770342 - 9770235
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| ||||||||||| |||||||| |||||| ||||||||||||||| ||||| |||||||||||||||||| | ||||||||||||||||    
T  9770342 gtaaaatcgcaatcaaaatcgatgaattttacccaaaaaaattaatactaaatatatgttatgaatggtatatagtcataagtaacttagtttataagaa 9770243  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  9770242 atcgtaaa 9770235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 9911310 - 9911417
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| ||||||||||||| |||||| |||||   ||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  9911310 gtaaaatcgcaatcaaaatcgatggactttaccaaaaaataataatacttaatatatgttataaatggtatatagtcataaatgacttagtttataagaa 9911409  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  9911410 atcgtaaa 9911417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 9770466 - 9770376
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  9770466 aaggttgtcaaaatcgggactttactttaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 9770376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 36121053 - 36120947
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| |||||||||||||||||||| |||| | | |||||||||||||  ||||||||||||||||||||||||| ||||||| ||||||||    
T  36121053 gtaaaatcgcaatcaaaatcgatggattttaccaaaaataat-aatactaaatatattttataaatggtatatagtcataaatgacttagtatataagaa 36120955  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  36120954 atcgtaaa 36120947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 17466309 - 17466202
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||  ||| |||||||||||||||||||   |||||  ||||| |||||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  17466309 gtaaaattgcaatcaaaatcgatggattttacaacaaaaaaataatattaaatatatgttataaatggtatatagtcataaatgacttagtttattagaa 17466210  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  17466209 atcgtaaa 17466202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 13023766 - 13023693
Alignment:
Q  162 aaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  13023766 aaaaaaattaatactaaatatatgttataaatggtatatagtcataaatgacttagtttataaaaaatcgtaaa 13023693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 5361862 - 5361969
Alignment:
Q  126 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 225  Q
    |||||||||| ||| |||| ||||||||||| ||| ||| ||   ||||||||||||| |||| |||||||||||| |||||||| ||||||||||||||    
T  5361862 tcgtaaaatcgcaatcaaagtcgatggatttgaccaaaagaaa--aatactaaatatatgttaaaaatggtatataatcataaatgacttagtttataag 5361959  T
Q  226 aaatcgtaaa 235  Q
    ||||||||||    
T  5361960 aaatcgtaaa 5361969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 8889456 - 8889351
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| ||||||||||| |||||||| | ||||   |||||||||||||  ||||||||||||||||||||||||  |||| |||||||||||    
T  8889456 gtaaaatcgcaatcaaaatcgatgaattttaccaacaaaaa--aatactaaatatatattataaatggtatatagtcataaacgacttggtttataagaa 8889359  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  8889358 atcgtaaa 8889351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 70 - 158
Target Start/End: Original strand, 23064737 - 23064825
Alignment:
Q  70 aggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 158  Q
    |||||||||||||||||| | |||||||||||||||||||||| | ||||||| |||||||||||| ||| |||||| || ||||||||    
T  23064737 aggttgtcaaaatcgggactttacttcaggtcgaaagggaataacgaaatcggaactcgtaaaatcgcaatcaaaattgaaggatttta 23064825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 6346730 - 6346820
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||| | | | |||||||||||||||||| ||||||||||  | |||||||||||||| ||||||||| |||||||||    
T  6346730 aaggttgtcaaaatcggaaatttgcttcaggtcgaaagggaagagcaaaatcgaaaatcgtaaaatcacaatcaaaatcgaaggattttac 6346820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 10143130 - 10143022
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatt-taatactaaatatacgttataaatggtatatagtcataaattacttagtttataaga 226  Q
    |||||||| ||| |||||| ||||||||||| | ||||||   ||||||||||||||  |||||| |||||||||||||||||| ||||  |||||||||    
T  10143130 gtaaaatcgcaatcaaaattgatggattttatcaaaaaaaaaataatactaaatatatattataattggtatatagtcataaatgacttgatttataaga 10143031  T
Q  227 aatcgtaaa 235  Q
    |||||||||    
T  10143030 aatcgtaaa 10143022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 5376019 - 5375929
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||| |||| | ||||||||||| |||   ||||| ||||||||||||||||||||| ||| ||||||||| |||||||||    
T  5376019 aaggttgtcaaaattgggactttacttcaggtcaaaaataaatagtaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 5375929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 55476342 - 55476252
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||| |||||||||||| | ||||||| ||||||||||| ||  |||||||| |||||||||||| ||| ||||||||| |||||||||    
T  55476342 aaggttatcaaaatcgggactttacttcaagtcgaaagggagtaataaaatcggtactcgtaaaatcgcaatcaaaatcgaaggattttac 55476252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 37240445 - 37240380
Alignment:
Q  170 taatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    |||||||||||||| | ||||||||||||| |||||||||| ||||| ||||||||||||||||||    
T  37240445 taatactaaatatatgatataaatggtatagagtcataaatgacttaatttataagaaatcgtaaa 37240380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 8010946 - 8011001
Alignment:
Q  104 aagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  8010946 aagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 8011001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 36121178 - 36121087
Alignment:
Q  68 taaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||||||||  | ||||||| || |||||||||||||  |||||||||||||||||||  || |||||||||  ||||||||    
T  36121178 taaggttgtcaaaatcgggtctttacttcaagttgaaagggaatagcttaatcgggactcgtaaaatcggaatcaaaatcgaaagattttac 36121087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 7045298 - 7045208
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||| || ||| |||||||||||||||||||| |||||||||   | || ||||||| ||| ||||||||| |||||||||    
T  7045298 aaggttgtcaaaataggaattttacttcaggtcgaaagggaagagcaaaatcaaaaatcataaaatcgcaatcaaaatcgaaggattttac 7045208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 23064860 - 23064969
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattact--tagtttataag 225  Q
    |||||||  ||| |||||||||  ||||||||| |||||   |||||||||||||| |||||||||| ||||  ||||||||| |||  |||||||||||    
T  23064860 gtaaaattgcaatcaaaatcgaatgattttaccaaaaaataataatactaaatatatgttataaatgatatagggtcataaatgacttatagtttataag 23064959  T
Q  226 aaatcgtaaa 235  Q
    ||||||||||    
T  23064960 aaatcgtaaa 23064969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 67 - 159
Target Start/End: Original strand, 9911184 - 9911276
Alignment:
Q  67 ctaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||| |||||||||  ||| | |||||||  |||||||||||||| ||||||||||||||||||||| |||  |||| ||| |||||||||    
T  9911184 ctaagggtgtcaaaattaggactttacttcatatcgaaagggaatagtaaaatcgggactcgtaaaatcgcaataaaaaacgaaggattttac 9911276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 159
Target Start/End: Original strand, 13551442 - 13551537
Alignment:
Q  64 taactaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||| ||||||| || ||| ||| | |||||| |||||||| ||||||||||||||  ||||||||||||| |||  |||||||| |||||||||    
T  13551442 taactgaggttgtaaagatccggactttacttctggtcgaaaaggaatagcaaaatcaagactcgtaaaatcgcaattaaaatcgaaggattttac 13551537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 13023903 - 13023821
Alignment:
Q  78 aaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacc 160  Q
    ||||| |||| | ||||||| |||||||| ||||||||||||||| |||||||||||||||| ||| || ||  |||||||||    
T  13023903 aaaattgggactttacttcaagtcgaaagagaatagcaaaatcggaactcgtaaaatcacaatcaagatagaatgattttacc 13023821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 24719922 - 24719870
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcg 121  Q
    |||||||||||||||| |||| | |||||||||||||||||| ||||||||||    
T  24719922 aaggttgtcaaaatcgagattttgcttcaggtcgaaagggaagagcaaaatcg 24719870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 18459406 - 18459493
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattt 156  Q
    |||||||||||||||| |||| | |||||||| |||||| || ||||||||||  | |||||||||| |||  |||||||| ||||||    
T  18459406 aaggttgtcaaaatcgagattttgcttcaggttgaaaggaaagagcaaaatcgacaatcgtaaaatcgcaattaaaatcgaaggattt 18459493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 221
Target Start/End: Original strand, 8011035 - 8011129
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataaattacttagttta 221  Q
    |||||||| ||| ||||||||||| |||||||| ||| |||  |||| ||||||||| ||||||||| ||||||| | |||||| | ||||||||    
T  8011035 gtaaaatcgcaatcaaaatcgatgtattttaccaaaacaaaaataatgctaaatatatgttataaattgtatataattataaatgaattagttta 8011129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 8889570 - 8889481
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||||||| | |||||||||||||| | | |||||||| |  | | |||||||| ||||||||||||| |||| ||||    
T  8889570 aaggttgtcaaaatcgggattttgcttcaggtcgaaagag-agagcaaaattgacaattgtaaaatcgcaaccaaaatcgaaggatcttac 8889481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 210
Target Start/End: Complemental strand, 55476223 - 55476123
Alignment:
Q  110 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 208  Q
    |||||||| |||| |||||||||||| ||| ||||||||| ||||| |||| ||| |||  |||| | ||||||| ||||||||| | ||||||||||||    
T  55476223 atagcaaagtcggaactcgtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgcaaaatatatgttataaattgcatatagtcataa 55476125  T
Q  209 at 210  Q
    ||    
T  55476124 at 55476123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 27528189 - 27528137
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcg 121  Q
    |||||||||||||||| |||| |||||||  ||||||||||||| ||||||||    
T  27528189 aaggttgtcaaaatcgagattttacttcatatcgaaagggaataacaaaatcg 27528137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 7452859 - 7452772
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattt 156  Q
    ||||||||||||||  ||||| | |||||||||||||||||| || ||| | |  | |||||||||| ||| ||||||||| ||||||    
T  7452859 aaggttgtcaaaattaggattttgcttcaggtcgaaagggaagagaaaagttgaaaatcgtaaaatcgcaatcaaaatcgaaggattt 7452772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 210
Target Start/End: Complemental strand, 8409863 - 8409729
Alignment:
Q  76 tcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaata 174  Q
    |||||||||||| | ||||||| || |||||||| ||||||||| | || |  |||||||  || ||||||||| ||||| |||| ||| |||  ||||     
T  8409863 tcaaaatcgggactttacttcaagttgaaagggagtagcaaaattgagatttataaaatcgtaatcaaaatcga-ggattctaccaaaacaaaaataatg 8409765  T
Q  175 ctaaatatacgttataaatggtatatagtcataaat 210  Q
    ||||||||| |||||||||   ||||||||||||||    
T  8409764 ctaaatatatgttataaattacatatagtcataaat 8409729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 147
Target Start/End: Original strand, 46664152 - 46664227
Alignment:
Q  72 gttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatc 147  Q
    ||||||||||| |||||| | ||||||||||||| | |||||||||||||  | ||| |||||| ||| |||||||    
T  46664152 gttgtcaaaattgggattttgcttcaggtcgaaaagaaatagcaaaatcgaaaatcggaaaatcgcaatcaaaatc 46664227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 8367511 - 8367466
Alignment:
Q  114 caaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||||||||||  ||| ||||||||| |||||||||    
T  8367511 caaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttac 8367466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 15982743 - 15982795
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcg 121  Q
    |||||||||||||| |||||| | |||||| ||||||||| ||||||| ||||    
T  15982743 aaggttgtcaaaattgggattttgcttcagatcgaaaggggatagcaagatcg 15982795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 5058759 - 5058652
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| ||||||||||||| |||||| |||||   |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  5058759 gtaaaatcgcaatcaaaatcgatggactttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaa 5058660  T
Q  228 atcgtaaa 235  Q
    ||||||||    
T  5058659 atcgtaaa 5058652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 4247585 - 4247479
Alignment:
Q  129 taaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaa 228  Q
    ||||||| ||| |||||||||||||||||||||||||||  |||||||||||||| |||| ||||| ||||||||||||||| |||||||||||||||||    
T  4247585 taaaatcgcaatcaaaatcgatggattttacctaaaaaaaataatactaaatatatgttacaaatgatatatagtcataaatgacttagtttataagaaa 4247486  T
Q  229 tcgtaaa 235  Q
    || ||||    
T  4247485 tcataaa 4247479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 20570785 - 20570891
Alignment:
Q  129 taaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaa 228  Q
    ||||||||||| ||||||||||||| |||||| |||||   |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  20570785 taaaatcacaatcaaaatcgatggactttaccaaaaaagaataatactaaatatatgttataaatggtatatagtcataaatgacttattttataagaaa 20570884  T
Q  229 tcgtaaa 235  Q
    |||||||    
T  20570885 tcgtaaa 20570891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 17811578 - 17811470
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaat-ttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataaga 226  Q
    |||||||| ||| |||||||||||||||||||| ||||||| |||||| ||||||||  |||||||||||||||| | |||||| |||||||||||||||    
T  17811578 gtaaaatcgcaatcaaaatcgatggattttacccaaaaaatattaatattaaatatattttataaatggtatataattataaatgacttagtttataaga 17811479  T
Q  227 aatcgtaaa 235  Q
    |||||||||    
T  17811478 aatcgtaaa 17811470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 44944744 - 44944851
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| |||||||||| || |||||| |||||   |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  44944744 gtaaaatcgcaatcaaaatcgatagactttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaa 44944843  T
Q  228 atcgtaaa 235  Q
    || |||||    
T  44944844 atagtaaa 44944851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 24725371 - 24725480
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaa-----tactaaatatacgttataaatggtatatagtcataaattacttagtttat 222  Q
    |||||||| ||| |||||||||||||||||||| ||||||  |||     ||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  24725371 gtaaaatcgcaatcaaaatcgatggattttacccaaaaaaaataaaataatactaaatatatgttataaatggtatatagtcataaatgacttagtttat 24725470  T
Q  223 aagaaatcgt 232  Q
    ||||||||||    
T  24725471 aagaaatcgt 24725480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 17811703 - 17811612
Alignment:
Q  68 taaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||||||||| | ||||||||||| |||||||||||||||||||||| |||||||||| ||| |||||||||  ||||||||    
T  17811703 taaggttgtcaaaatcgggactttacttcaggtcaaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaagattttac 17811612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 24989548 - 24989639
Alignment:
Q  68 taaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||||||||| | ||||| |||||||||||||||| |||||||||||||||||||||  ||| ||||||||| |||||||||    
T  24989548 taaggttgtcaaaatcgggactttactttaggtcgaaagggaataacaaaatcgggactcgtaaaatggcaatcaaaatcgaaggattttac 24989639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 8329941 - 8330051
Alignment:
Q  126 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaa-tggtatatagtcataaattacttagtttataa 224  Q
    |||||||||  ||| ||||||| |||||||||||| |||||| | |||| ||| |||| |||||||| |||||||||||||||||| |||||||||||||    
T  8329941 tcgtaaaattgcaatcaaaatcaatggattttaccaaaaaaaataaataataagtatatgttataaaatggtatatagtcataaatgacttagtttataa 8330040  T
Q  225 gaaatcgtaaa 235  Q
     ||||||||||    
T  8330041 aaaatcgtaaa 8330051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 65 - 158
Target Start/End: Complemental strand, 5058886 - 5058793
Alignment:
Q  65 aactaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 158  Q
    ||||||||||||||||||||||| | |||||||| || |||||||||||||||||||| | |||||||||  ||| ||||||||| ||||||||    
T  5058886 aactaaggttgtcaaaatcgggactttacttcagatcaaaagggaatagcaaaatcggaattcgtaaaattgcaatcaaaatcgaaggatttta 5058793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 61 - 159
Target Start/End: Complemental strand, 5715643 - 5715549
Alignment:
Q  61 ttctaactaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||||||||||||| | ||||    ||||||||| ||||| ||||||||||||||||||||| ||| ||||||||| |||||||||    
T  5715643 ttctaactaaggttgtcaaaatcgggactttact----gtcgaaaggaaatagaaaaatcgggactcgtaaaatcgcaatcaaaatcgagggattttac 5715549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 159
Target Start/End: Complemental strand, 8304438 - 8304350
Alignment:
Q  71 ggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||| || | ||||||| |||||||| || ||||||||||| ||||||||||||||||| ||||||||| |||||||||    
T  8304438 ggttgtcaaaatcgagactttacttcaagtcgaaagagagtagcaaaatcgcgactcgtaaaatcacaatcaaaatcgaaggattttac 8304350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 5715514 - 5715412
Alignment:
Q  129 taaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaa 228  Q
    ||||||| ||| ||||||||||| |||||||| ||||||    | | | |||||| ||||||||||||||||| |||||||| |||||||||||||||||    
T  5715514 taaaatcgcaatcaaaatcgatgaattttaccaaaaaaa----aaaatgaatatatgttataaatggtatataatcataaatgacttagtttataagaaa 5715419  T
Q  229 tcgtaaa 235  Q
    |||||||    
T  5715418 tcgtaaa 5715412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 128 - 237
Target Start/End: Complemental strand, 11325209 - 11325099
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaat----ggtatatagtcataaattacttagtttata 223  Q
    ||||||| |||| |||||||||||||||||||| ||||||   || |||||||||  |||||||||    ||||||||||||||||| ||||||||||||    
T  11325209 gtaaaattacaatcaaaatcgatggattttaccaaaaaaaaaaaa-actaaatat--gttataaataattggtatatagtcataaatgacttagtttata 11325113  T
Q  224 agaaatcgtaaatt 237  Q
    ||||||||||||||    
T  11325112 agaaatcgtaaatt 11325099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 14055439 - 14055374
Alignment:
Q  170 taatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  14055439 taatattaaatatatgttataaatggtatatagtcataaatgacttagtttataagaagtcgtaaa 14055374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 14365467 - 14365402
Alignment:
Q  170 taatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  14365467 taatattaaatatatgttataaatggtatatagtcataaatgacttagtttataagaagtcgtaaa 14365402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 24990012 - 24990077
Alignment:
Q  170 taatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    |||||||||||||| ||||||||| |||||||||||||||| | ||||||||||||||||||||||    
T  24990012 taatactaaatatatgttataaatagtatatagtcataaatgatttagtttataagaaatcgtaaa 24990077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 26281256 - 26281313
Alignment:
Q  175 ctaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgt 232  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  26281256 ctaaatataagttataaatggtatatagtcataaatgacttagtttataagaaatcgt 26281313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 27221602 - 27221541
Alignment:
Q  174 actaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27221602 actatatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaa 27221541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 8346431 - 8346539
Alignment:
Q  129 taaaatcacaaccaaaatcgatggattttacctaaaaaatt-taatactaaatatacgttataaa-tggtatatagtcataaattacttagtttataaga 226  Q
    ||||||| ||| || |||| |||||||||||| |||||||  |||||||||||||| |||||||| || ||||||| |||| || |||||||||||||||    
T  8346431 taaaatctcaatcataatcaatggattttaccaaaaaaataataatactaaatatatgttataaaatgatatatagacatagatgacttagtttataaga 8346530  T
Q  227 aatcgtaaa 235  Q
    |||||||||    
T  8346531 aatcgtaaa 8346539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 21846344 - 21846433
Alignment:
Q  126 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattactta 216  Q
    |||||||||||||| |||||| ||||||||||||| ||| || | |||| |||||||| |||||||||| ||||||||||||||| |||||    
T  21846344 tcgtaaaatcacaatcaaaattgatggattttacccaaataaat-aatattaaatatatgttataaatgatatatagtcataaatgactta 21846433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 22687042 - 22687132
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||| |||||||||||| | |||||| ||||||| ||| |||||||||| || ||||||||||||||||||||| || | |||||||    
T  22687042 aaggttgttaaaatcgggattttgcttcagatcgaaagagaagagcaaaatcgagaatcgtaaaatcacaaccaaaattgaagaattttac 22687132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 25842506 - 25842596
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||| ||||||| |||| | ||||||| ||||||||||| ||||||||||||||||||||||||| ||| |||||| |  |||||||||    
T  25842506 aaggttatcaaaattgggactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaattggaggattttac 25842596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 44944619 - 44944700
Alignment:
Q  68 taaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcga 149  Q
    |||||||||||||||||||| | |||||||| |||||||| |||||||||  |||||||||||||||| |||  ||||||||    
T  44944619 taaggttgtcaaaatcgggactttacttcagatcgaaaggaaatagcaaatgcgggactcgtaaaatcgcaattaaaatcga 44944700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 20570657 - 20570750
Alignment:
Q  66 actaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||| ||||||||||||||||| | |||||||||| ||||||||||| |||||| | ||||| ||||||| ||| |||||| ||  ||||||||    
T  20570657 actagggttgtcaaaatcgggactctacttcaggttgaaagggaataacaaaattgagactcataaaatcgcaatcaaaattgaaagattttac 20570750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 8343699 - 8343806
Alignment:
Q  126 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaa-tggtatatagtcataaattacttagtttataa 224  Q
    |||||||||| ||| |||| || ||||||||||   |||||   ||||||||||||||  ||||||| ||||||||| ||||| || |||||||||||||    
T  8343699 tcgtaaaatcgcaatcaaagtcaatggatttta---aaaaataataatactaaatataacttataaaatggtatataatcatagatgacttagtttataa 8343795  T
Q  225 gaaatcgtaaa 235  Q
    |||||||||||    
T  8343796 gaaatcgtaaa 8343806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 10285678 - 10285758
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcga 149  Q
    ||||||||||||||||||||| |||||||||||||||| ||| || ||||||   | |||||||||| ||| |||||||||    
T  10285678 aaggttgtcaaaatcgggattttacttcaggtcgaaagagaagagaaaaatcaacaatcgtaaaatcgcaatcaaaatcga 10285758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 76 - 159
Target Start/End: Complemental strand, 27221762 - 27221678
Alignment:
Q  76 tcaaaatcgggattatacttc-aggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||| | |||||  |||||||||| | ||||||||||||||| |||||||||| ||| ||||||||| |||||||||    
T  27221762 tcaaaatcgggactttacttttaggtcgaaagagtatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttac 27221678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 206
Target Start/End: Original strand, 8253990 - 8254096
Alignment:
Q  100 tcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtat 198  Q
    |||||||||| ||||||||||| ||||||||||||| ||| ||||||||| ||||| |||| ||| |||  ||||  |||||||| ||||||||| | ||    
T  8253990 tcgaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcat 8254088  T
Q  199 atagtcat 206  Q
    ||||||||    
T  8254089 atagtcat 8254096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 159
Target Start/End: Original strand, 9685064 - 9685159
Alignment:
Q  64 taactaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||| ||||||| || ||| ||| | |||||| |||||||| ||||||||||||||  ||||||||||||| |||  |||||||| |||||||||    
T  9685064 taactgaggttgtaaagatccggactttacttctggtcgaaaaggaatagcaaaatcaagactcgtaaaatcgcaattaaaatcgaaggattttac 9685159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 1981100 - 1981186
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatt 155  Q
    |||||| |||||||||||| | ||||||| ||||||||||| ||| ||||| || ||||||||||||  || ||||||||| |||||    
T  1981100 aaggttatcaaaatcgggactttacttcaagtcgaaagggattagaaaaattggaactcgtaaaatcgtaatcaaaatcgaaggatt 1981186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 11326637 - 11326547
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||| | | | || ||||||| ||||| |||||||||||| ||||||| ||||||||||| |||||| || | |||||||    
T  11326637 aaggttgtcaaaatcagaactttatttcaggtggaaagagaatagcaaaattgggactcttaaaatcacaatcaaaattgaagtattttac 11326547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 14055610 - 14055521
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||| ||| | |||||||||||||| ||  ||||||||||  | | |||||||| ||||||||||||| |||||||||    
T  14055610 aaggttgtcaaaatcgg-attttgcttcaggtcgaaagagatgagcaaaatcgacaatggtaaaatcgcaaccaaaatcgaaggattttac 14055521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 14365638 - 14365549
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||| ||| | |||||||||||||| ||  ||||||||||  | | |||||||| ||||||||||||| |||||||||    
T  14365638 aaggttgtcaaaatcgg-attttgcttcaggtcgaaagagatgagcaaaatcgacaatggtaaaatcgcaaccaaaatcgaaggattttac 14365549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 39182510 - 39182420
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||||| |||| | |||||| || |||| ||| || |||||||  | |||||||||| ||||||||||||| |||||||||    
T  39182510 aaggttgtcaaaatcgtgattttgcttcagttccaaagagaagagaaaaatcgacaatcgtaaaatcgcaaccaaaatcgaaggattttac 39182420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 25842625 - 25842725
Alignment:
Q  110 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 208  Q
    |||||||| ||||||||||||||||| ||| ||||||||| ||||| |||| ||| |||  ||||  |||||||| ||||||||| | ||||||||||||    
T  25842625 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatagtcataa 25842723  T
Q  209 at 210  Q
    ||    
T  25842724 at 25842725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 4247706 - 4247620
Alignment:
Q  73 ttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||| |||| | ||||||| ||||||||||||||  ||||| |||| |||||||||| ||| |||| || | |||||||||    
T  4247706 ttgtcaaaattgggactttacttcaagtcgaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcaaaggattttac 4247620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 235
Target Start/End: Complemental strand, 6916996 - 6916903
Alignment:
Q  141 caaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    ||||||||||| |||||||| | ||||    ||| |||||||| ||||||| ||| ||| |||||||||| ||||| ||||||||||||||||||    
T  6916996 caaaatcgatgaattttaccaacaaaaaaatatattaaatatatgttataactggaata-agtcataaatgacttaatttataagaaatcgtaaa 6916903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 26617376 - 26617478
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaa 227  Q
    |||||||| ||| |||||||||| ||||||||  |||||| | ||||||||||||| ||||||||||    |||||||||||| ||||||| || ||||     
T  26617376 gtaaaatcgcaatcaaaatcgattgattttacaaaaaaaaat-aatactaaatatatgttataaatg----atagtcataaatgacttagtctacaagat 26617470  T
Q  228 atcgtaaa 235  Q
     |||||||    
T  26617471 ctcgtaaa 26617478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 1981217 - 1981317
Alignment:
Q  110 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 208  Q
    |||||||| ||||||||||||||||  ||| ||||||||| ||||| || | ||| |||  |||| ||||||||| ||||||||| | ||||||||||||    
T  1981217 atagcaaagtcgggactcgtaaaattgcaatcaaaatcga-ggattctatcaaaacaaaaataatgctaaatatatgttataaattgcatatagtcataa 1981315  T
Q  209 at 210  Q
    ||    
T  1981316 at 1981317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 26281164 - 26281251
Alignment:
Q  68 taaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttt 157  Q
    |||||||||||||||| ||| | ||||| ||||||||| |||||||| ||||| ||| |||||||||| ||| |||||| || |||||||    
T  26281164 taaggttgtcaaaatcaggactttactttaggtcgaaaaggaatagc-aaatcagga-tcgtaaaatcgcaatcaaaattgaaggatttt 26281251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 1977903 - 1977812
Alignment:
Q  68 taaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||  ||||||  |||| | |||||||||||||| ||| || |||||||  | |||||||||| ||| ||||||||| |||||||||    
T  1977903 taaggttggtaaaatcaagattttgcttcaggtcgaaagagaagagaaaaatcgacaatcgtaaaatcgcaatcaaaatcgaaggattttac 1977812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 17809000 - 17809119
Alignment:
Q  102 gaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatat 200  Q
    |||| |||||||||||||||  | |||||||||| ||| ||||||  || |||| |||| ||| |||  |||| ||||||||| ||||||||| | ||||    
T  17809000 gaaatggaatagcaaaatcgaaaatcgtaaaatcgcaatcaaaattcatagattctaccaaaacaaaaataatgctaaatatatgttataaattgcatat 17809099  T
Q  201 agtcataaattacttagttt 220  Q
    | |||||||| ||| |||||    
T  17809100 aatcataaatgactcagttt 17809119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 121
Target Start/End: Original strand, 21157468 - 21157527
Alignment:
Q  62 tctaactaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcg 121  Q
    |||||| |||||||| ||||| || ||| |||||||| || |||||||||||||||||||    
T  21157468 tctaacaaaggttgttaaaattggaattttacttcagatcaaaagggaatagcaaaatcg 21157527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 23618203 - 23618294
Alignment:
Q  68 taaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||| ||||||||  || | ||||| | || |||||||| |||||||||||||||||  |||||| ||| ||||||||| | |||||||    
T  23618203 taaggttatcaaaatcaagactttactttaagttgaaagggagtagcaaaatcgggactccgaaaatcgcaatcaaaatcgaagaattttac 23618294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 27509914 - 27509949
Alignment:
Q  200 tagtcataaattacttagtttataagaaatcgtaaa 235  Q
    ||||||||||| ||||||||||||||||||||||||    
T  27509914 tagtcataaatgacttagtttataagaaatcgtaaa 27509949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 147
Target Start/End: Complemental strand, 4575083 - 4575006
Alignment:
Q  70 aggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatc 147  Q
    ||||||||||||| | |||| | |||||||| |||||||||||| ||||||   | |||||||||| ||| |||||||    
T  4575083 aggttgtcaaaattgagatttttcttcaggttgaaagggaatagtaaaatcaaaaatcgtaaaatcgcaatcaaaatc 4575006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 23618323 - 23618423
Alignment:
Q  110 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 208  Q
    |||||||| |||||||||||||||||  || ||||||||| ||||| |||| ||| |||  ||||  ||||||||  |||||||| | ||||||||||||    
T  23618323 atagcaaagtcgggactcgtaaaatcgtaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatattataaattgcatatagtcataa 23618421  T
Q  209 at 210  Q
    ||    
T  23618422 at 23618423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 27509311 - 27509379
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggta 197  Q
    |||||||| |||  ||| ||||| ||||||||| |||||| | ||||||||||||| |||||||||||||    
T  27509311 gtaaaatcgcaataaaattcgattgattttaccaaaaaaaat-aatactaaatatatgttataaatggta 27509379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 8e-31; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 39428133 - 39428025
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaat-ttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataaga 226  Q
    |||||||| ||| |||||||||||||||||||| ||||||  ||||||||||||||| ||||||| | |||||||||||||||| |||||||||||||||    
T  39428133 gtaaaatcgcaatcaaaatcgatggattttacccaaaaaaaattaatactaaatatatgttataagtagtatatagtcataaatgacttagtttataaga 39428034  T
Q  227 aatcgtaaa 235  Q
    |||||||||    
T  39428033 aatcgtaaa 39428025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 128 - 224
Target Start/End: Complemental strand, 28746006 - 28745910
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataa 224  Q
    |||||||| ||| |||||||||||||||||||| |||||| |||||| |||||||| ||||||||| |||||||||||||||| |||||||||||||    
T  28746006 gtaaaatcgcaatcaaaatcgatggattttacccaaaaaaattaatagtaaatatatgttataaatagtatatagtcataaatgacttagtttataa 28745910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 15515171 - 15515259
Alignment:
Q  142 aaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgt 232  Q
    |||||| |||||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  15515171 aaaatccatggattttaccaaaaaaat--aatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgt 15515259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 141 - 235
Target Start/End: Complemental strand, 42697065 - 42696970
Alignment:
Q  141 caaaatcgatggattttacctaaaaaatttaa-tactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    |||||||||||||||||||| ||||||   || ||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42697065 caaaatcgatggattttaccaaaaaaaaaaaaataccaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaa 42696970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 76 - 159
Target Start/End: Complemental strand, 3041570 - 3041487
Alignment:
Q  76 tcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||| ||||||| ||||||| ||| ||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  3041570 tcaaaatcgggattttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 3041487  T

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Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 8156028 - 8156136
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatt--taatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 225  Q
    |||||||| ||| ||| |||| ||||||||||| |||| | |  |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||    
T  8156028 gtaaaatcgcaatcaatatcg-tggattttaccaaaaataataataatactaaatatatgttataaatggtatatagttataaataacttagtttataag 8156126  T
Q  226 aaatcgtaaa 235  Q
    ||||||||||    
T  8156127 aaatcgtaaa 8156136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 8592174 - 8592264
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||| ||||||||| | ||||||| ||||||||| ||||||||||||| ||||||||||||| ||| ||||||||| |||||||||    
T  8592174 aaggttgtcgaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttac 8592264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 28746130 - 28746040
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||| |||| | ||||||||||||||||  ||||||||||||||||||||||||||| ||| ||||||||| | |||||||    
T  28746130 aaggttgtcaaaattgggactttacttcaggtcgaaagaaaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaagaattttac 28746040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 24620096 - 24620206
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaattt---aatactaaatatacgttataaatggtatatagtcataaattacttagtttataa 224  Q
    |||||||| ||| |||||| | ||||||||||| ||||||  |   |||||||||||||  |||||||||||||||| |||||||| |||||||||||||    
T  24620096 gtaaaatcgcaatcaaaattgttggattttaccaaaaaaaaataaaaatactaaatatattttataaatggtatataatcataaatgacttagtttataa 24620195  T
Q  225 gaaatcgtaaa 235  Q
    |||||||||||    
T  24620196 gaaatcgtaaa 24620206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 24619971 - 24620062
Alignment:
Q  68 taaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||||||| | | ||||||| ||| ||||||||||||||||| |||||| |||||||| ||| ||||||||| |||||||||    
T  24619971 taaggttgtcaaaatcggaactttacttcaagtcaaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttac 24620062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 65 - 147
Target Start/End: Original strand, 22355837 - 22355919
Alignment:
Q  65 aactaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatc 147  Q
    |||||||||| |||||||||| | | ||| ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  22355837 aactaaggttctcaaaatcggaactttacatcaggtcgaaatggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatc 22355919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 41671533 - 41671443
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||||||| | |||||||||||||| ||| ||||||||||  | | |||||||| ||||||||||||| |||||||||    
T  41671533 aaggttgtcaaaatcgggattttgcttcaggtcgaaagagaagagcaaaatcgataattgtaaaatcgcaaccaaaatcgaaggattttac 41671443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 24649524 - 24649588
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaa 133  Q
    |||||||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  24649524 aaggttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaa 24649588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 8560232 - 8560322
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||| |||||||||||| | ||||||| ||| ||||||| ||||||||||| ||||||| ||||| ||| ||||||||| |||||||||    
T  8560232 aaggttatcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgagactcgtgaaatcgcaatcaaaatcgaaggattttac 8560322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 29067630 - 29067541
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||| | | |||||||||||||| ||||||||||||||||| |||| ||||||| ||| | ||||||| |||||||||    
T  29067630 aaggttgtcaaaatcggaactttacttcaggtcgaatgggaatagcaaaatcggaactcataaaatctcaatc-aaatcgaaggattttac 29067541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 126 - 236
Target Start/End: Complemental strand, 22137509 - 22137399
Alignment:
Q  126 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatt--taatactaaatatacgttataaatggtatatagtcataaattacttagtttata 223  Q
    |||||||| || || |||||| ||||||||||||  ||||||||  |||||||||||||| ||||||||| |||||||||||||||| |||||||  |||    
T  22137509 tcgtaaaaccaaaatcaaaattgatggattttaca-aaaaaattaataatactaaatata-gttataaatagtatatagtcataaatgacttagtaaata 22137412  T
Q  224 agaaatcgtaaat 236  Q
    |||||||| ||||    
T  22137411 agaaatcgaaaat 22137399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 25870221 - 25870294
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatata 201  Q
    |||||||| ||| |||||||||||||||||||| |||||   |||||||||||||| |||||||||||||||||    
T  25870221 gtaaaatcgcaatcaaaatcgatggattttaccaaaaaacaataatactaaatatatgttataaatggtatata 25870294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 20766676 - 20766756
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcga 149  Q
    ||||||||||||||||||| | |||||||  ||||||| || ||||||||||| ||||||||||||| ||| |||||||||    
T  20766676 aaggttgtcaaaatcgggactttacttcaactcgaaagagagtagcaaaatcgagactcgtaaaatcgcaatcaaaatcga 20766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 18014346 - 18014255
Alignment:
Q  68 taaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||| |||||||||||| | ||||||| ||  ||| ||| ||||||||| ||||||||||||||| ||| ||||||||| |||||||||    
T  18014346 taaggttatcaaaatcgggactttacttcaagttaaaatggagtagcaaaattgggactcgtaaaatcgcaatcaaaatcgaaggattttac 18014255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 29067507 - 29067407
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaat--ttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 225  Q
    |||||||| ||| |||||||||||||||||||| ||||||   |||| ||||||||||         |||||||||||||||||| ||||||||||||||    
T  29067507 gtaaaatcgcaatcaaaatcgatggattttacccaaaaaaaaattaacactaaatata---------tggtatatagtcataaatgacttagtttataag 29067417  T
Q  226 aaatcgtaaa 235  Q
    ||||||||||    
T  29067416 aaatcgtaaa 29067407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 30727656 - 30727722
Alignment:
Q  91 tacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttt 157  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||| ||| ||||||||||| |||||    
T  30727656 tacttcaggttgaaagggaatagcaaaatcgagactcctaaaatcgcaatcaaaatcgatgaatttt 30727722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 39428258 - 39428184
Alignment:
Q  72 gttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaat 146  Q
    |||||||||||||||| | |||||  ||| |||||||||||||||||||||||||| ||||||| ||| ||||||    
T  39428258 gttgtcaaaatcgggactttacttgcggttgaaagggaatagcaaaatcgggactcataaaatcgcaatcaaaat 39428184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 22494681 - 22494781
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaat------ttaatactaaatatacgttataaatggtatatagtcataaattacttagttta 221  Q
    |||||||| ||| |||||| ||||||||||||| ||||||       || |||||||||||| |||||||||||||||||||||||| | ||||||||||    
T  22494681 gtaaaatcgcaatcaaaatagatggattttacccaaaaaaaaaaaacttgatactaaatatatgttataaatggtatatagtcataactgacttagttta 22494780  T
Q  222 t 222  Q
    |    
T  22494781 t 22494781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 6860986 - 6861121
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaa 167  Q
    |||||||||||||| |||||| | ||||||||||||||||||||| ||||       || ||||||| ||| ||||||||||||||| |||| ||| |||    
T  6860986 aaggttgtcaaaattgggattttgcttcaggtcgaaagggaatagtaaaa-------tcataaaatcgcaatcaaaatcgatggattctaccaaaacaaa 6861078  T
Q  168 tttaatactaaatatacgttataaatggtatatagtcataaat 210  Q
      |||  |||| |||| ||||||||| || |||||||||||||    
T  6861079 aataaagctaactatatgttataaattgtctatagtcataaat 6861121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 9152883 - 9152984
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatt-taatactaaatatacgttataaatggtatatagtcataaattacttagtttataaga 226  Q
    |||||||||||| |||||||||| ||||||||| |||| |   ||||| ||||||| |  |||| ||| ||||||||||||||| |||||||||||||||    
T  9152883 gtaaaatcacaatcaaaatcgatagattttaccaaaaacacaataatattaaatatgc--tatacatgatatatagtcataaataacttagtttataaga 9152980  T
Q  227 aatc 230  Q
    ||||    
T  9152981 aatc 9152984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 126 - 236
Target Start/End: Complemental strand, 21963663 - 21963550
Alignment:
Q  126 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatt--taatactaaatatacgttataaatggtatata--gtcataaattacttagttta 221  Q
    |||||||| || || |||||| ||||||||||||  ||||||||  |||||||||||||| ||||||||| |||||||  ||||||||| |||||||  |    
T  21963663 tcgtaaaaccagaatcaaaattgatggattttacaaaaaaaattaataatactaaatata-gttataaatagtatatatagtcataaatgacttagtaaa 21963565  T
Q  222 taagaaatcgtaaat 236  Q
    |||||||||| ||||    
T  21963564 taagaaatcgaaaat 21963550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 126 - 236
Target Start/End: Complemental strand, 21986099 - 21985986
Alignment:
Q  126 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatt--taatactaaatatacgttataaatggtatata--gtcataaattacttagttta 221  Q
    |||||||| || || |||||| ||||||||||||  ||||||||  |||||||||||||| ||||||||| |||||||  ||||||||| |||||||  |    
T  21986099 tcgtaaaaccagaatcaaaattgatggattttacaaaaaaaattaataatactaaatata-gttataaatagtatatatagtcataaatgacttagtaaa 21986001  T
Q  222 taagaaatcgtaaat 236  Q
    |||||||||| ||||    
T  21986000 taagaaatcgaaaat 21985986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 210
Target Start/End: Complemental strand, 9169942 - 9169808
Alignment:
Q  76 tcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaata 174  Q
    |||||||||| | | ||||||| ||||||||| | ||||||||| ||||| ||||||||  ||| ||||||||| ||||| |||| ||| |||  ||||     
T  9169942 tcaaaatcggaactttacttcaagtcgaaaggaagtagcaaaattgggacccgtaaaattgcaatcaaaatcga-ggattctaccaaaacaaaaataatg 9169844  T
Q  175 ctaaatatacgttataaatggtatatagtcataaat 210  Q
     |||||||| ||||||||| | ||||||||||||||    
T  9169843 ttaaatatatgttataaattgcatatagtcataaat 9169808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 17064662 - 17064571
Alignment:
Q  68 taaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||| |||||| | ||||||||||||||  || | ||||||||  | |||||||||| ||| ||||||||| |||||||||    
T  17064662 taaggttgtcaaaattgggattttgcttcaggtcgaaagaaaagatcaaaatcgacaatcgtaaaatcgcaatcaaaatcgaaggattttac 17064571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 20756252 - 20756186
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatg 194  Q
    |||||||| ||| |||||||||||||||||||| |||| |  |||||||||||||| ||||||||||    
T  20756252 gtaaaatcgcaatcaaaatcgatggattttacccaaaagaaataatactaaatatatgttataaatg 20756186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 22971162 - 22971073
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||| ||||||| |||| | ||||||| ||  ||||| | ||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  22971162 aaggttatcaaaattgggactttacttcaagttaaaagg-agtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 22971073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 25870097 - 25870187
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||||| |||| | ||| |||||||||| ||| || |||||||  | |||||||||| ||||||||||| | |||||||||    
T  25870097 aaggttgtcaaaatcgagattttgctttaggtcgaaagagaagagtaaaatcgacaatcgtaaaatcgcaaccaaaatcaaaggattttac 25870187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 158
Target Start/End: Original strand, 3449085 - 3449174
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 158  Q
    |||||||||||||| |||||| | ||| |||| ||||| ||| ||||||||||  | |||||||||| |||||||||||||  |||||||    
T  3449085 aaggttgtcaaaattgggattttgctttaggttgaaagagaagagcaaaatcgacaatcgtaaaatcgcaaccaaaatcgaatgatttta 3449174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 210
Target Start/End: Complemental strand, 19348788 - 19348688
Alignment:
Q  110 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 208  Q
    |||||||| ||||||||||||||||| ||| ||||||||| ||||| |||| ||| |||  ||||  |||||||| ||||||||| | ||||||||||||    
T  19348788 atagcaaattcgggactcgtaaaatcgcaatcaaaatcga-ggattataccaaaacaaaaataatgttaaatatatgttataaattgcatatagtcataa 19348690  T
Q  209 at 210  Q
    ||    
T  19348689 at 19348688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 158
Target Start/End: Complemental strand, 19348906 - 19348818
Alignment:
Q  70 aggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 158  Q
    ||||| ||||||| | || | ||||||| ||| ||||||| ||||||||||| ||||||||||||| ||| |||||| || ||||||||    
T  19348906 aggttatcaaaattgagactttacttcaagtcaaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaatggaaggatttta 19348818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 193
Target Start/End: Original strand, 8560351 - 8560433
Alignment:
Q  110 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaat 193  Q
    |||||||| ||||||||||||||||| ||| |||||||||| |||| |||| ||| ||  |||| ||||||||| |||||||||    
T  8560351 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcgat-gattctaccaaaataaaataatgctaaatatatgttataaat 8560433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 8592293 - 8592399
Alignment:
Q  110 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 208  Q
    |||||||||||||| ||||||||||| ||| ||||||| | ||||| |||| ||| |||  ||||  |||||||| ||||||||| | ||||||||||||    
T  8592293 atagcaaaatcgggtctcgtaaaatcgcaatcaaaatc-aaggattctaccaaaacaaaaataatgataaatatatgttataaattgcatatagtcataa 8592391  T
Q  209 attactta 216  Q
    || |||||    
T  8592392 atgactta 8592399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 13006174 - 13006088
Alignment:
Q  73 ttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacc 160  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||| |  | |||||||||| ||| |||||| ||  |||||||||    
T  13006174 ttgtcaaaatcgggatt-tgctttaggtcgaaagggaatagcaaaattgaaaatcgtaaaatcgcaatcaaaattgaatgattttacc 13006088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 17064483 - 17064444
Alignment:
Q  196 tatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  17064483 tatatagtcataaatgacttagtttataagaaatcgtaaa 17064444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 72 - 147
Target Start/End: Complemental strand, 22137628 - 22137553
Alignment:
Q  72 gttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatc 147  Q
    ||||||||||||| |||| |  ||||||||||||| ||| ||||||||| | | | ||||||||||||||||||||    
T  22137628 gttgtcaaaatcgagattttgtttcaggtcgaaagagaagagcaaaatcagcaatagtaaaatcacaaccaaaatc 22137553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 10872490 - 10872580
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||| ||||| ||||||||||| |||||||| || ||||||   | || ||||||| ||| |||||| || |||||||||    
T  10872490 aaggttgtcaaaatcaggattttacttcaggtcaaaagggaagagaaaaatcaaaaatcataaaatcgcaatcaaaattgaaggattttac 10872580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 27090796 - 27090706
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||| |||||| |||| ||||| ||||||||||||||||| ||||| |  | |||||| ||| |||  |||||||| |||||||||    
T  27090796 aaggttgtcgaaatcgagattttactttaggtcgaaagggaatagaaaaattgcaaatcgtaagatcgcaataaaaatcgaaggattttac 27090706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 15806223 - 15806348
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaa 167  Q
    |||||||||||||||| |||| | |||||| ||||||||||| ||||||||||  | || || ||||  || || ||| |||||||| |||| ||| |||    
T  15806223 aaggttgtcaaaatcgagattttgcttcagctcgaaagggaaaagcaaaatcgaaaatcatacaatcgtaatcagaattgatggattctaccaaaacaaa 15806322  T
Q  168 tttaatactaaatatacgttataaat 193  Q
      |||| ||||||||| |||||||||    
T  15806323 aataatgctaaatatatgttataaat 15806348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 22355961 - 22356030
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggta 197  Q
    |||||| | ||| |||||||||||||||||||| |||||   ||||| |||||||| |||||||||||||    
T  22355961 gtaaaaccgcaaacaaaatcgatggattttaccaaaaaataataataataaatatatgttataaatggta 22356030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 6136466 - 6136543
Alignment:
Q  126 tcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtc 204  Q
    |||||||||||||| |||||||||||||||||||| ||| |||  ||||||||| |||| ||  ||||| ||||||||||    
T  6136466 tcgtaaaatcacaatcaaaatcgatggattttaccaaaacaaaaataatactaactatatgt--taaattgtatatagtc 6136543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 159
Target Start/End: Complemental strand, 27676787 - 27676700
Alignment:
Q  72 gttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||| |||||| ||||| | ||||| |||||||||||| ||||||||||  | || ||||||| ||| |||||||||  ||||||||    
T  27676787 gttgttaaaatcaggattttgcttcaagtcgaaagggaagagcaaaatcgaaaatcttaaaatcgcaatcaaaatcgaaagattttac 27676700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 21963778 - 21963708
Alignment:
Q  76 tcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaat 146  Q
    ||||||||| |||| |  ||||||||||||| ||| ||||||||||  | | |||||||||||||||||||    
T  21963778 tcaaaatcgagattttgtttcaggtcgaaagagaagagcaaaatcgacaatagtaaaatcacaaccaaaat 21963708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 21986214 - 21986144
Alignment:
Q  76 tcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaat 146  Q
    ||||||||| |||| |  ||||||||||||| ||| ||||||||||  | | |||||||||||||||||||    
T  21986214 tcaaaatcgagattttgtttcaggtcgaaagagaagagcaaaatcgacaatagtaaaatcacaaccaaaat 21986144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 18014226 - 18014143
Alignment:
Q  110 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaat 193  Q
    |||||||| ||||||||||||||||| ||| ||||||||| ||||| || | ||| |||  |||| ||||||||| |||||||||    
T  18014226 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcga-ggattctatcaaaacaaaaataatgctaaatatatgttataaat 18014143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 110 - 146
Target Start/End: Original strand, 20766795 - 20766831
Alignment:
Q  110 atagcaaaatcgggactcgtaaaatcacaaccaaaat 146  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  20766795 atagcaaaatcgggactcataaaatcacaatcaaaat 20766831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 8e-31; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 35565857 - 35565960
Alignment:
Q  129 taaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaa 228  Q
    ||||||||||| |||||||||||||||||||| ||||||   ||||||||||||| ||||||||| |||||||||||||||| |||| ||||||||||||    
T  35565857 taaaatcacaatcaaaatcgatggattttaccaaaaaaa---aatactaaatatatgttataaattgtatatagtcataaatgactttgtttataagaaa 35565953  T
Q  229 tcgtaaa 235  Q
    |||||||    
T  35565954 tcgtaaa 35565960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 141 - 233
Target Start/End: Complemental strand, 36430065 - 36429973
Alignment:
Q  141 caaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgta 233  Q
    |||||||||||||||||||||||||||   ||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  36430065 caaaatcgatggattttacctaaaaaaaaaaatactaaatatatgttagaaatgatatatagtcataaattacttagtttataagaaatcgta 36429973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 31578217 - 31578127
Alignment:
Q  144 aatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    ||||||||||||||| | |||||| | ||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  31578217 aatcgatggattttaaccaaaaaaat-aatactaaatatatgttataaatggtatatagtcataaatgacttagtttataataaatcgtaaa 31578127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 1690625 - 1690734
Alignment:
Q  126 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataag 225  Q
    |||||||||| ||| ||||||||||  |||||||| |||||   ||||| ||||||||  ||||||||||||||||||||||||  ||||||||||||||    
T  1690625 tcgtaaaatcgcaatcaaaatcgataaattttaccaaaaaataataatattaaatatattttataaatggtatatagtcataaaagacttagtttataag 1690724  T
Q  226 aaatcgtaaa 235  Q
    ||||||||||    
T  1690725 aaatcgtaaa 1690734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 15588754 - 15588856
Alignment:
Q  129 taaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaa 228  Q
    ||||||| ||| |||||||||||||||||||| |||||||  ||||||||||||| |  |||||||||||||| |||||||| |||||||||||| ||||    
T  15588754 taaaatcgcaatcaaaatcgatggattttaccaaaaaaat--aatactaaatatatg--ataaatggtatataatcataaatgacttagtttatatgaaa 15588849  T
Q  229 tcgtaaa 235  Q
    |||||||    
T  15588850 tcgtaaa 15588856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 31237875 - 31237983
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatac-taaatatacgttataaatggtatatagtcataaattacttagtttataaga 226  Q
    |||||||  ||| |||||||||||||||||||| |||||   |||||| | |||||| ||||||||||||||||| |||||||| |||||||||||||||    
T  31237875 gtaaaattgcaatcaaaatcgatggattttaccaaaaaataataatacatgaatatatgttataaatggtatataatcataaatgacttagtttataaga 31237974  T
Q  227 aatcgtaaa 235  Q
    |||||||||    
T  31237975 aatcgtaaa 31237983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 20064077 - 20063987
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||||  | |||||||||| |||||||||||||||||||| ||||||||||||| ||| ||||||||| | |||||||    
T  20064077 aaggttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttac 20063987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 27523881 - 27523961
Alignment:
Q  79 aaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||| | ||||||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  27523881 aaatcgggactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttac 27523961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 19262091 - 19262181
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||| ||||||| | | ||||||| |||||| |||||||||||||||||||||||||||||| ||| |||||||||  ||||||||    
T  19262091 aaggttgtcgaaatcggaactttacttcaagtcgaatgggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaagattttac 19262181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 158
Target Start/End: Original strand, 21869096 - 21869185
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 158  Q
    ||||| ||||||||||||| | ||||||| ||||||||||||||| ||||||||||||| ||||||| |||  |||||||| ||||||||    
T  21869096 aaggtcgtcaaaatcgggactttacttcaagtcgaaagggaatagaaaaatcgggactcttaaaatcgcaattaaaatcgaaggatttta 21869185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 20034004 - 20034087
Alignment:
Q  76 tcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||| | ||||||| ||||||||||| ||||||||||| ||||||||||||| ||| |||||| || |||||||||    
T  20034004 tcaaaatcgggactttacttcaagtcgaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaattgaaggattttac 20034087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 30433170 - 30433079
Alignment:
Q  68 taaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||||||   ||||||||||||||| | ||||| ||||||||||||| ||||||| ||| |||||||||  ||||||||    
T  30433170 taaggttgtcaaaatcgggacattacttcaggtcgaaaagcaatagaaaaatcgggactcataaaatcgcaatcaaaatcgaatgattttac 30433079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 1405137 - 1405047
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||||| || | || || ||||| |||||||||||||||||||| |||| ||||||| ||| ||||||||| |||||||||    
T  1405137 aaggttgtcaaaatcgagactttaatttaggtcaaaagggaatagcaaaatcggtactcataaaatcgcaatcaaaatcgaaggattttac 1405047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 25538920 - 25539010
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||| | | ||| ||||||||||||||||||| ||||||||| ||||||||||| ||| ||||||  | |||||||||    
T  25538920 aaggttgtcaaaatcggtactttacatcaggtcgaaagggaatagaaaaatcgggtctcgtaaaatcgcaatcaaaattaaaggattttac 25539010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 31237755 - 31237841
Alignment:
Q  73 ttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||| ||| | |||||||| || ||||||||||| ||||||||||||||||||||| ||| ||| ||||| |||||||||    
T  31237755 ttgtcaaaatcaggactttacttcagttcaaaagggaatagtaaaatcgggactcgtaaaatcgcaatcaatatcgaaggattttac 31237841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 64 - 210
Target Start/End: Complemental strand, 19492227 - 19492079
Alignment:
Q  64 taactaaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaa 163  Q
    |||||||| ||||||||||   |||| | |||||||||||||| ||| | ||||||    | |||||||| |  || |||||||||||||||||||| ||    
T  19492227 taactaagattgtcaaaattaagattttgcttcaggtcgaaagagaacaacaaaattaaaaatcgtaaaaccgtaatcaaaatcgatggattttaccaaa 19492128  T
Q  164 aaaatt--taatactaaatatacgttataaatggtatatagtcataaat 210  Q
    |||| |  |||| ||||||||| ||||||||| ||||||||||||||||    
T  19492127 aaaaataataatgctaaatatatgttataaattgtatatagtcataaat 19492079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 974693 - 974602
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgg-gactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||| |||| ||||||| | ||||||| ||||||||||| ||||||||||||  |||||||||||| ||| ||||||||| |||||||||    
T  974693 aaggttatcaatatcgggactttacttcaagtcgaaagggagtagcaaaatcggaaactcgtaaaatcgcaatcaaaatcgaaggattttac 974602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 7302136 - 7302046
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||| |||||||||||| | ||||||| || ||| |||  ||||||||||||||||||||||||  ||| ||||||||| |||||||||    
T  7302136 aaggttatcaaaatcgggactttacttcaagttgaaggggggtagcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttac 7302046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 19245943 - 19245853
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||||||||| | ||||| || |||||||||||||||||||   | |||||||||| ||| ||||||| | |||||||||    
T  19245943 aaggttgtcaaaatcgggattttgcttcaagttgaaagggaatagcaaaatcaaaaatcgtaaaatcgcaatcaaaatctaaggattttac 19245853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 30432592 - 30432542
Alignment:
Q  185 gttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  30432592 gttataaatggtatatagtaataaatgacttagtttataagaaatcgtaaa 30432542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 1404966 - 1404906
Alignment:
Q  175 ctaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    |||| |||| |||||||||||| ||||||||||||| ||||||| ||||||||||||||||    
T  1404966 ctaagtatatgttataaatggtgtatagtcataaatgacttagtatataagaaatcgtaaa 1404906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 34841813 - 34841717
Alignment:
Q  126 tcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataaattacttagttta 221  Q
    |||||||||| ||| ||||||||||||||| || | ||| |||  ||||| |||||||| ||||||||| |||||||||||||||| ||| ||||||    
T  34841813 tcgtaaaatcgcaatcaaaatcgatggattctatccaaacaaaaataataataaatatatgttataaattgtatatagtcataaataactcagttta 34841717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 21869215 - 21869321
Alignment:
Q  110 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 208  Q
    |||||||||||| ||||||||||||| ||| ||||||||||| ||| |||| ||| |||  | || ||||||||| ||||||||| | ||||||||||||    
T  21869215 atagcaaaatcgagactcgtaaaatcccaatcaaaatcgatg-attctaccaaaacaaaaattatgctaaatatatgttataaattgcatatagtcataa 21869313  T
Q  209 attactta 216  Q
    || |||||    
T  21869314 ataactta 21869321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 8428577 - 8428488
Alignment:
Q  68 taaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttt 157  Q
    |||||||||||||||||||||| | ||| ||||||||||||||||| ||||||   | |  ||||||| ||| ||||||||| |||||||    
T  8428577 taaggttgtcaaaatcgggattttgctttaggtcgaaagggaatagaaaaatcaaaaattctaaaatcgcaatcaaaatcgaaggatttt 8428488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 30433045 - 30432981
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaa 192  Q
    |||||||| ||| |||||| |||||||||||||  ||||| ||||||||||||||| ||||||||    
T  30433045 gtaaaatcgcaatcaaaatagatggattttaccccaaaaaattaatactaaatatatgttataaa 30432981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 974573 - 974467
Alignment:
Q  110 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 208  Q
    ||||| || ||||||||||||||||| ||| ||||||||| ||||| |||| ||| |||  ||||  |||||||| ||||||||| | ||||||||||||    
T  974573 atagcgaagtcgggactcgtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatagtcataa 974475  T
Q  209 attactta 216  Q
    || |||||    
T  974474 atgactta 974467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 20034114 - 20034216
Alignment:
Q  108 gaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcat 206  Q
    |||||||||| ||||||||||||||||| ||| ||||||||| ||||| |||| ||| |||  ||||  |||||||| ||||||||| | ||||| ||||    
T  20034114 gaatagcaaagtcgggactcgtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatactcat 20034212  T
Q  207 aaat 210  Q
    ||||    
T  20034213 aaat 20034216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 13502570 - 13502639
Alignment:
Q  126 tcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatg 194  Q
    |||||||||| ||| |||||||||||||||||||| ||| |||  ||||| |||||||| ||||||||||    
T  13502570 tcgtaaaatcgcaatcaaaatcgatggattttaccaaaacaaaaataatattaaatatatgttataaatg 13502639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 23863288 - 23863357
Alignment:
Q  93 cttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttaccta 162  Q
    ||||| |||||||| ||| |||||||||   | |||||||||| ||||||||||||||||||||| ||||    
T  23863288 cttcaagtcgaaagagaaaagcaaaatcaacattcgtaaaatcgcaaccaaaatcgatggattttgccta 23863357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 31023519 - 31023438
Alignment:
Q  141 caaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataaattacttagttta 221  Q
    |||||||||||||||||||| ||| |||  ||||  |||||||| ||||||||| ||| ||||||||||| || ||||||||    
T  31023519 caaaatcgatggattttaccaaaataaaaataatgttaaatatatgttataaatagtaaatagtcataaactaattagttta 31023438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 34578210 - 34578153
Alignment:
Q  102 gaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||| ||||||||||||||||| ||||||| ||| |||||| || |||||||||    
T  34578210 gaaagggagtagcaaaatcgggactcataaaatcgcaatcaaaattgaaggattttac 34578153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 41002256 - 41002160
Alignment:
Q  114 caaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataaat 210  Q
    ||||||||| ||||||||||||  || ||||||||| ||||| |||| ||| |||  |||| ||||||||| ||||||||| | ||||||||||||||    
T  41002256 caaaatcggaactcgtaaaatcgtaatcaaaatcga-ggattctaccaaaacaaaaataatgctaaatatatgttataaattgcatatagtcataaat 41002160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 15588632 - 15588720
Alignment:
Q  71 ggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||| || | |||| | |||||||||||||| ||| || |||||||  | || ||||||| ||||||||||||| |||||||||    
T  15588632 ggttgtcaatattgagattttgcttcaggtcgaaagagaaaagaaaaatcgacaatcataaaatcgcaaccaaaatcgaaggattttac 15588720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 34578124 - 34578041
Alignment:
Q  110 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaat 193  Q
    |||||||||||||||||||||||||| ||| ||||||||| ||||| |||| ||| |||  ||||  |||||||| |||||||||    
T  34578124 atagcaaaatcgggactcgtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaat 34578041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 20063953 - 20063914
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaa 167  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  20063953 gtaaaatcgcaaccaaaatcgatggattttaccaaaaaaa 20063914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 19262215 - 19262285
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtat 198  Q
    |||||||| ||| ||||||||| ||| |||||| |||||   ||||||||| |||| ||||||||||||||    
T  19262215 gtaaaatcgcaatcaaaatcgacggactttaccaaaaaataataatactaactatatgttataaatggtat 19262285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 221
Target Start/End: Original strand, 25539044 - 25539138
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaaaa-atttaatactaaatatacgttataaatggtatatagtcataaattacttagttta 221  Q
    |||||||  ||| |||||||||| ||||||||| ||| | |  |||| ||||||||| |||||| || |||||||||||||||| ||| ||||||    
T  25539044 gtaaaattgcaatcaaaatcgatagattttaccaaaacagaaataatgctaaatatatgttatatattgtatatagtcataaatgactcagttta 25539138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 132 - 235
Target Start/End: Original strand, 7358 - 7461
Alignment:
Q  132 aatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtatatagtcataaattacttagtttataagaaatcg 231  Q
    |||| ||| ||||||||||| |||||||| |||||   |||||||||||||| ||| ||| ||||||||| ||||||||||||| |||||||||||||||    
T  7358 aatcgcaatcaaaatcgatgaattttaccaaaaaacaataatactaaatatatgttctaattggtatatattcataaattacttcgtttataagaaatcg 7457  T
Q  232 taaa 235  Q
    ||||    
T  7458 taaa 7461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 7268 - 7320
Alignment:
Q  107 ggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||| |||| ||||||||  || ||||||||| |||||||||    
T  7268 ggaatagcaaaatcgagacttgtaaaatcgtaatcaaaatcgaaggattttac 7320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 56200 - 56290
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||||||| || | ||||||||||||||||||||||||||||||| |||   ||||||| ||| ||||||||| |||||||||    
T  56200 aaggttgtcaaaatcgagactttacttcaggtcgaaagggaatagcaaaatcgagacatctaaaatcgcaatcaaaatcgaaggattttac 56290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 58738 - 58788
Alignment:
Q  185 gttataaatggtatatagtcataaattacttagtttataagaaatcgtaaa 235  Q
    ||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  58738 gttataagtggtatatagtcataaatgatttagtttataagaaatcgtaaa 58788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 158
Target Start/End: Original strand, 14701 - 14790
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggatttta 158  Q
    |||||| |||||||||||  | ||||||| ||||||| ||| ||||||||||||||||||||||||| ||| ||||||||| ||||||||    
T  14701 aaggttatcaaaatcggggctttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggatttta 14790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 38302 - 38367
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaat 134  Q
    ||||||||||||||||||| | ||||||| ||||||||| ||||||||||||||||||||||||||    
T  38302 aaggttgtcaaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgggactcgtaaaat 38367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 93602 - 93712
Alignment:
Q  126 tcgtaaaatcacaaccaaaatcgatggattttacctaaaaaatttaatactaaatatacgttataaatggtata-tagtcataaattacttagtttataa 224  Q
    |||||||||| ||| |||||||||||||||||||| |||| |  || ||||||||||| ||||| ||| ||||| ||||||||||  ||||| |||| ||    
T  93602 tcgtaaaatcgcaatcaaaatcgatggattttaccaaaaacaaatattactaaatatatgttatgaatcgtatattagtcataaacgacttaatttaaaa 93701  T
Q  225 gaaatcgtaaa 235  Q
    |||||||||||    
T  93702 gaaatcgtaaa 93712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2084 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold2084
Description:

Target: scaffold2084; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 182 - 92
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||| |||||||||||| | ||||||| ||| ||||||| ||||||||||||||||||||||||   ||  |||||||| |||||||||    
T  182 aaggttatcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgggactcgtaaaattgtaattaaaatcgaaggattttac 92  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 221
Target Start/End: Original strand, 8858 - 8952
Alignment:
Q  128 gtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataaattacttagttta 221  Q
    |||||||| ||| |||||||||||||||||||| ||| |||  |||| ||||||||| ||||||| | |||||||||||||||| ||| ||||||    
T  8858 gtaaaatcgcaatcaaaatcgatggattttaccaaaacaaagataatgctaaatatatgttataagttgtatatagtcataaatgactcagttta 8952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0526 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 210
Target Start/End: Complemental strand, 8391 - 8292
Alignment:
Q  110 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 208  Q
    |||||||| ||||||||||||||||| ||| ||||||||| ||||| |||| ||| |||| |||||||||||||| | ||||||| | ||||||||||||    
T  8391 atagcaaagtcgggactcgtaaaatcgcaatcaaaatcga-ggattctaccaaaacaaatataatactaaatatatg-tataaattgcatatagtcataa 8294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0526; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 8510 - 8420
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||| |||||||||||| | ||||| | ||||||||||| ||| ||||| ||||||| ||||||  ||  ||||||||| |||||||||    
T  8510 aaggttatcaaaatcgggagtttactttaagtcgaaagggagtagtaaaattgggactcataaaattgcagtcaaaatcgaaggattttac 8420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 76084 - 76149
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaat 134  Q
    ||||||||||||||||||| | ||||||  ||||||||| |||||||||  |||||||||||||||    
T  76084 aaggttgtcaaaatcgggactttacttccagtcgaaaggaaatagcaaacccgggactcgtaaaat 76149  T

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Target: scaffold0182 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 24718 - 24675
Alignment:
Q  91 tacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaat 134  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  24718 tacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaat 24675  T

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Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 133009 - 133109
Alignment:
Q  110 atagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttacctaaa-aaatttaatactaaatatacgttataaatggtatatagtcataa 208  Q
    |||||||| ||||||||||||||||| ||| ||||||| | ||||| |||  ||| ||| |||||  |||||||| ||||||||| | ||||||||||||    
T  133009 atagcaaagtcgggactcgtaaaatcgcaatcaaaatc-aaggattctactaaaacaaaattaatgttaaatatatgttataaattgcatatagtcataa 133107  T
Q  209 at 210  Q
    ||    
T  133108 at 133109  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 145943 - 145852
Alignment:
Q  68 taaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||||||||||| | |||| | ||||||||||||||  |||||  ||||||  | |||||||||  ||| ||||||||| |||||||||    
T  145943 taaggttgtcaaaattgagattttgcttcaggtcgaaagaaaatagttaaatcgaaaatcgtaaaatagcaatcaaaatcgaaggattttac 145852  T

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Target: scaffold1787 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1787
Description:

Target: scaffold1787; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 407
Target Start/End: Original strand, 1289 - 1339
Alignment:
Q  357 tgatgcacagcttggacattaaggttcgccctgctattgctgcattagtga 407  Q
    ||||||||||||||||||||||||||| ||||  |||||| ||||| ||||    
T  1289 tgatgcacagcttggacattaaggttcacccttttattgccgcatttgtga 1339  T

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Target: scaffold0510 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 3 - 69
Alignment:
Q  93 cttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    |||||||||||| | ||| ||||||||||  | ||||||||||  |||||||||||| |||||||||    
T  3 cttcaggtcgaatgagaagagcaaaatcgacaatcgtaaaatcgaaaccaaaatcgaaggattttac 69  T

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Target: scaffold0048 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 61089 - 61179
Alignment:
Q  69 aaggttgtcaaaatcgggattatacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcacaaccaaaatcgatggattttac 159  Q
    ||||||| ||||||||||||| | ||||||||| |||| ||| || |||||    | |||||||||||||| ||||||||| | |||||||    
T  61089 aaggttgccaaaatcgggattttgcttcaggtcaaaagagaaaagtaaaatttaaaatcgtaaaatcacaatcaaaatcgaagaattttac 61179  T

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