View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2024-Insertion-1 (Length: 1165)

Name: NF2024-Insertion-1
Description: NF2024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2024-Insertion-1
NF2024-Insertion-1
[»] chr2 (30 HSPs)
chr2 (287-999)||(31623149-31623873)
chr2 (745-937)||(31605010-31605202)
chr2 (807-939)||(31618988-31619121)
chr2 (865-947)||(31608315-31608397)
chr2 (687-854)||(31607232-31607398)
chr2 (26-119)||(21213787-21213880)
chr2 (756-824)||(31612758-31612826)
chr2 (28-117)||(42327362-42327451)
chr2 (24-119)||(29197339-29197434)
chr2 (26-119)||(12086094-12086187)
chr2 (26-119)||(37480093-37480186)
chr2 (26-117)||(42602574-42602665)
chr2 (82-119)||(2144463-2144500)
chr2 (30-106)||(25637182-25637258)
chr2 (909-947)||(31612895-31612933)
chr2 (26-76)||(37971956-37972006)
chr2 (26-120)||(39715009-39715103)
chr2 (45-117)||(30410533-30410605)
chr2 (686-749)||(31618659-31618723)
chr2 (26-117)||(1435084-1435174)
chr2 (30-117)||(11251107-11251194)
chr2 (26-116)||(19016052-19016142)
chr2 (29-119)||(23052491-23052581)
chr2 (24-98)||(38551807-38551881)
chr2 (26-119)||(7799001-7799093)
chr2 (26-119)||(30359672-30359764)
chr2 (30-119)||(31573610-31573699)
chr2 (26-95)||(33582015-33582084)
chr2 (26-119)||(37755936-37756029)
chr2 (48-117)||(42420289-42420358)
[»] chr8 (26 HSPs)
chr8 (533-609)||(16221874-16221950)
chr8 (26-119)||(968380-968473)
chr8 (533-608)||(40114431-40114506)
chr8 (534-609)||(41529018-41529093)
chr8 (29-119)||(23361617-23361707)
chr8 (26-119)||(30774701-30774794)
chr8 (26-117)||(2203512-2203603)
chr8 (26-117)||(6536540-6536631)
chr8 (26-119)||(8485017-8485110)
chr8 (26-119)||(28783078-28783171)
chr8 (533-611)||(36755191-36755269)
chr8 (24-117)||(3624600-3624692)
chr8 (24-119)||(29858012-29858107)
chr8 (20-119)||(39642600-39642699)
chr8 (20-114)||(3305147-3305241)
chr8 (41-123)||(11942859-11942940)
chr8 (533-608)||(24044244-24044317)
chr8 (26-119)||(22268899-22268991)
chr8 (57-117)||(30483880-30483940)
chr8 (26-117)||(11819796-11819887)
chr8 (208-246)||(20112373-20112411)
chr8 (26-91)||(7347883-7347948)
chr8 (24-117)||(19703450-19703543)
chr8 (26-115)||(29431033-29431122)
chr8 (26-119)||(35641866-35641959)
chr8 (32-117)||(35690035-35690120)
[»] chr5 (24 HSPs)
chr5 (533-611)||(32259395-32259473)
chr5 (26-119)||(16773825-16773918)
chr5 (26-117)||(29075801-29075892)
chr5 (534-609)||(42631240-42631315)
chr5 (29-119)||(29692354-29692444)
chr5 (24-117)||(43241645-43241738)
chr5 (24-116)||(12883861-12883953)
chr5 (533-608)||(9022816-9022891)
chr5 (29-119)||(16457828-16457918)
chr5 (26-119)||(14495770-14495863)
chr5 (26-116)||(8278240-8278330)
chr5 (26-119)||(30109274-30109366)
chr5 (26-110)||(84851-84935)
chr5 (26-117)||(12877713-12877804)
chr5 (34-117)||(30883171-30883254)
chr5 (57-117)||(21549133-21549193)
chr5 (29-117)||(22020830-22020918)
chr5 (29-117)||(43442216-43442304)
chr5 (208-246)||(5347723-5347761)
chr5 (26-120)||(24907506-24907600)
chr5 (635-676)||(1082418-1082459)
chr5 (26-119)||(21589306-21589399)
chr5 (26-75)||(22661276-22661325)
chr5 (34-79)||(23270624-23270669)
[»] chr3 (38 HSPs)
chr3 (26-119)||(10499074-10499167)
chr3 (533-609)||(50239341-50239417)
chr3 (26-119)||(16991560-16991653)
chr3 (26-119)||(2667880-2667973)
chr3 (26-119)||(12761530-12761623)
chr3 (26-119)||(4844476-4844569)
chr3 (26-119)||(4870172-4870265)
chr3 (26-119)||(14339628-14339721)
chr3 (240-285)||(53714415-53714460)
chr3 (26-116)||(51903843-51903933)
chr3 (26-119)||(11612317-11612410)
chr3 (26-119)||(36720399-36720492)
chr3 (26-119)||(44069776-44069869)
chr3 (26-119)||(47236936-47237029)
chr3 (46-115)||(47279389-47279458)
chr3 (26-110)||(44743820-44743904)
chr3 (26-117)||(47454582-47454673)
chr3 (24-78)||(13448382-13448436)
chr3 (26-107)||(17232164-17232245)
chr3 (26-111)||(54990728-54990813)
chr3 (26-114)||(28531023-28531111)
chr3 (27-119)||(30232348-30232440)
chr3 (31-119)||(32638963-32639051)
chr3 (45-117)||(46518648-46518720)
chr3 (24-75)||(19307880-19307931)
chr3 (24-119)||(31520568-31520663)
chr3 (26-119)||(2597184-2597278)
chr3 (26-112)||(10445104-10445190)
chr3 (26-120)||(19716214-19716308)
chr3 (29-119)||(31510686-31510776)
chr3 (26-100)||(33861699-33861773)
chr3 (26-104)||(52769948-52770026)
chr3 (40-117)||(4222161-4222238)
chr3 (36-117)||(14186668-14186748)
chr3 (66-119)||(17554789-17554842)
chr3 (45-114)||(40063642-40063711)
chr3 (26-119)||(40268507-40268599)
chr3 (62-115)||(43417336-43417389)
[»] scaffold0114 (1 HSPs)
scaffold0114 (533-609)||(34503-34579)
[»] chr1 (34 HSPs)
chr1 (533-611)||(49878060-49878138)
chr1 (533-605)||(45920630-45920702)
chr1 (26-116)||(51814515-51814605)
chr1 (45-118)||(9643793-9643866)
chr1 (26-119)||(52116746-52116839)
chr1 (30-117)||(21547449-21547536)
chr1 (30-117)||(52336743-52336830)
chr1 (26-116)||(16893415-16893505)
chr1 (26-119)||(952529-952622)
chr1 (26-119)||(12587288-12587380)
chr1 (26-95)||(15065007-15065076)
chr1 (26-119)||(40257417-40257510)
chr1 (26-84)||(30203192-30203250)
chr1 (26-120)||(42983339-42983433)
chr1 (30-119)||(9879456-9879545)
chr1 (44-117)||(33700756-33700829)
chr1 (45-117)||(8177166-8177238)
chr1 (45-117)||(9165179-9165251)
chr1 (34-118)||(31383771-31383855)
chr1 (24-96)||(43446004-43446076)
chr1 (26-117)||(6122814-6122905)
chr1 (44-119)||(28411348-28411423)
chr1 (26-117)||(31794229-31794320)
chr1 (240-283)||(48835096-48835139)
chr1 (26-96)||(19940837-19940907)
chr1 (26-116)||(27476736-27476826)
chr1 (30-120)||(48619178-48619268)
chr1 (26-112)||(50901607-50901692)
chr1 (66-119)||(1690082-1690135)
chr1 (45-114)||(8904437-8904506)
chr1 (26-75)||(18037578-18037627)
chr1 (26-119)||(34228892-34228984)
chr1 (29-94)||(34460877-34460942)
chr1 (26-119)||(37400292-37400385)
[»] scaffold0258 (1 HSPs)
scaffold0258 (26-119)||(15288-15381)
[»] scaffold0284 (1 HSPs)
scaffold0284 (533-609)||(2980-3056)
[»] chr7 (42 HSPs)
chr7 (26-113)||(279919-280005)
chr7 (26-119)||(30579353-30579446)
chr7 (26-119)||(48771956-48772049)
chr7 (29-113)||(11735446-11735530)
chr7 (26-117)||(45709673-45709764)
chr7 (26-116)||(2446329-2446419)
chr7 (26-117)||(42711978-42712069)
chr7 (33-119)||(22760881-22760967)
chr7 (30-120)||(37085518-37085608)
chr7 (26-119)||(41487380-41487470)
chr7 (26-119)||(11720925-11721018)
chr7 (26-119)||(19553472-19553564)
chr7 (26-119)||(43590925-43591018)
chr7 (29-113)||(26703149-26703233)
chr7 (30-117)||(24513817-24513904)
chr7 (26-117)||(35513486-35513577)
chr7 (26-117)||(41519230-41519320)
chr7 (29-111)||(5934147-5934229)
chr7 (26-116)||(25590632-25590722)
chr7 (30-115)||(20335800-20335885)
chr7 (26-119)||(38374564-38374657)
chr7 (26-119)||(48125140-48125232)
chr7 (45-117)||(26459394-26459466)
chr7 (71-119)||(37233582-37233630)
chr7 (24-119)||(7801198-7801293)
chr7 (26-117)||(17040977-17041068)
chr7 (66-117)||(39499724-39499775)
chr7 (30-117)||(45976892-45976979)
chr7 (26-120)||(3280451-3280544)
chr7 (26-116)||(5668536-5668626)
chr7 (240-282)||(6729405-6729447)
chr7 (240-290)||(14629818-14629868)
chr7 (29-119)||(15137571-15137661)
chr7 (29-119)||(18056743-18056833)
chr7 (26-84)||(21558181-21558239)
chr7 (631-677)||(30153146-30153192)
chr7 (26-84)||(48582802-48582860)
chr7 (35-96)||(2882991-2883052)
chr7 (26-119)||(5273555-5273648)
chr7 (539-608)||(7939633-7939702)
chr7 (66-119)||(8108599-8108652)
chr7 (26-115)||(15905639-15905727)
[»] chr6 (13 HSPs)
chr6 (533-610)||(14211598-14211675)
chr6 (26-119)||(33549122-33549215)
chr6 (26-118)||(6385881-6385973)
chr6 (26-119)||(30127418-30127511)
chr6 (26-84)||(8597712-8597770)
chr6 (26-116)||(24333990-24334080)
chr6 (26-119)||(6758387-6758480)
chr6 (26-119)||(21418488-21418581)
chr6 (26-118)||(12633028-12633120)
chr6 (26-118)||(31622956-31623048)
chr6 (26-113)||(21943395-21943480)
chr6 (208-246)||(30709491-30709529)
chr6 (56-117)||(20744504-20744565)
[»] chr4 (35 HSPs)
chr4 (26-119)||(51250487-51250580)
chr4 (533-609)||(6551989-6552065)
chr4 (28-116)||(19531969-19532057)
chr4 (533-608)||(312160-312235)
chr4 (26-115)||(7949419-7949508)
chr4 (26-117)||(13015447-13015538)
chr4 (26-117)||(13901762-13901853)
chr4 (29-103)||(42815662-42815736)
chr4 (26-119)||(19238542-19238635)
chr4 (26-119)||(28635714-28635807)
chr4 (26-111)||(46295123-46295208)
chr4 (26-118)||(24234664-24234755)
chr4 (26-114)||(42644875-42644963)
chr4 (26-117)||(30938184-30938275)
chr4 (25-116)||(39509091-39509182)
chr4 (26-112)||(37274424-37274510)
chr4 (26-107)||(14451711-14451792)
chr4 (26-119)||(21660109-21660202)
chr4 (26-119)||(21668873-21668966)
chr4 (34-119)||(49576867-49576952)
chr4 (26-119)||(55427165-55427258)
chr4 (45-117)||(37109335-37109407)
chr4 (45-117)||(38869788-38869860)
chr4 (24-120)||(43728412-43728507)
chr4 (26-117)||(8030169-8030260)
chr4 (44-114)||(24124038-24124108)
chr4 (26-116)||(52254369-52254459)
chr4 (45-119)||(56236899-56236973)
chr4 (30-119)||(4482317-4482406)
chr4 (26-119)||(12821986-12822079)
chr4 (26-119)||(17618299-17618392)
chr4 (24-53)||(29312227-29312256)
chr4 (240-285)||(34372278-34372323)
chr4 (24-117)||(46545731-46545824)
chr4 (26-119)||(51954132-51954225)
[»] scaffold0194 (1 HSPs)
scaffold0194 (36-119)||(13021-13104)
[»] scaffold0211 (1 HSPs)
scaffold0211 (533-605)||(20612-20687)
[»] scaffold0101 (1 HSPs)
scaffold0101 (23-120)||(43294-43391)
[»] scaffold0032 (1 HSPs)
scaffold0032 (26-119)||(112300-112393)
[»] scaffold0009 (1 HSPs)
scaffold0009 (26-116)||(19812-19902)
[»] scaffold0172 (1 HSPs)
scaffold0172 (26-119)||(15742-15835)
[»] scaffold0118 (1 HSPs)
scaffold0118 (28-117)||(41600-41689)
[»] scaffold0002 (1 HSPs)
scaffold0002 (44-117)||(94954-95027)
[»] scaffold0074 (1 HSPs)
scaffold0074 (38-114)||(45736-45812)
[»] scaffold0471 (1 HSPs)
scaffold0471 (44-114)||(8625-8695)
[»] scaffold0299 (1 HSPs)
scaffold0299 (57-119)||(11546-11608)
[»] scaffold0517 (1 HSPs)
scaffold0517 (26-119)||(7691-7784)
[»] scaffold0021 (1 HSPs)
scaffold0021 (24-116)||(156952-157042)


Alignment Details
Target: chr2 (Bit Score: 500; Significance: 0; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 500; E-Value: 0
Query Start/End: Original strand, 287 - 999
Target Start/End: Original strand, 31623149 - 31623873
Alignment:
Q  287 accactaacacttgttagtaaaatgaaaataagcaagcagagatggaaggtctccaaccccgttggatgaaaatcaacgttttactgagtgtgtttaaat 386  Q
    |||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  31623149 accactaacacttgttagtaaa-tgaaaataagcgagcacagatggaaggtctccaaccccgttagatgaaaatcaacgttttaaagagtgtgtttaaat 31623247  T
Q  387 gtgtaagttgtcaattttaaaggaaagttgcttcaaaagtgcatttttgtttatactacaaacaaatggcttgcgnnnnnnnntcacaaatgcatatcgt 486  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||        ||||||||||||||||     
T  31623248 gtgtaagttgttaattttaaaggaaagttgcttcaaaagtgcatttttttttatactacaaacaaatggtttgcgaaaaaaa-tcacaaatgcatatcgg 31623346  T
Q  487 tttagcatgaatcggtgtaagatcttgttttagttgaataaaggtggttttatcccatgtttgaatttaactgacactagatatattataatattgtctc 586  Q
    |||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||  | ||||    
T  31623347 tttagcatgaatcggtgtaaaatcctgttttagttgaataaatgtggttttatcccatgtttgaatttaactgacactagataaatcataat--tatctc 31623444  T
Q  587 cctcaactagggcgaaattctagtctgcgggtgtccatactagttctctttaaattgcatattccatttagtttgttaaatgaagaggatcttgctcatt 686  Q
    ||||||||| | ||||||||||    | ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  31623445 cctcaactatgacgaaattctaactcgtgggtgtccacactagttctctttaaattgcatactccatttagtttgttaaatgaagaggatcttgctcgtt 31623544  T
Q  687 atttccaatccatttgccaattcattctacgtcttcattaaaatgaaagaaaactgaaattctccaccataagaatacaaaaacaatatccattaattac 786  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31623545 atttccaatccatttgccaattcattctatgtcttcattaaaatgaaagaaaactgaaattctccaccataagaatacaaaaacaatatccattaattac 31623644  T
Q  787 atgaaaaaattaattaaaacaagtcctaattaatgtgcattaaacaatgttgaacctacaaagaggatcg-aaaaagataaatcaccacccactcattgc 885  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31623645 atgaaaaaattaattaaaacaactcctaattaatgtgcattaaacaatgttgaacctacaaagaggatcgaaaaaagataaatcaccacccactcattgc 31623744  T
Q  886 cagtaagattgaatgcaaaagtgttgtcaagttgatcttcatcatcatcagaatc------------ttttggtagctttgtaa-attcgtgtgtggacc 972  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||| |||||||||||||||    
T  31623745 cagtaagattgaatgcaaaagtgttgtcaagttgatcttcatcatcatcagaatcttttggtggattttttggtagctttgtaatattcgtgtgtggacc 31623844  T
Q  973 agtcccc-atcctcctcca-ctgtgctac 999  Q
    ||||||| ||||||||||| |||||||||    
T  31623845 agtccccaatcctcctccacctgtgctac 31623873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 745 - 937
Target Start/End: Original strand, 31605010 - 31605202
Alignment:
Q  745 attctccaccataagaatacaaaaacaatatccattaattacatgaaaaaattaattaaaacaagtcctaattaatgtgcattaaacaatgttgaaccta 844  Q
    |||| |||| |||||||| | |||||||  |||||||||| ||||| ||||||||||||||||| || |||||||||||| |||||||||||||||||||    
T  31605010 attccccacaataagaatcccaaaacaacgtccattaatttcatgagaaaattaattaaaacaactc-taattaatgtgctttaaacaatgttgaaccta 31605108  T
Q  845 caaagaggatcgaaa-aagataaatcaccacccactcattgccagtaagattgaatgcaaaagtgttgtcaagttgatcttcatcatcatcaga 937  Q
    ||||||||||| ||| |||| ||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31605109 caaagaggatcaaaagaagaaaaaccaccacccactcattgctggtaagattgaatgcaaaagtgttgtcaagttgatcttcatcgtcatcaga 31605202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 807 - 939
Target Start/End: Original strand, 31618988 - 31619121
Alignment:
Q  807 aagtcctaattaatgtgcattaaacaatgttgaacctacaaagaggatcgaaaaa-gataaatcaccacccactcattgccagtaagattgaatgcaaaa 905  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||| ||||| || |||||||||||||||| ||||||||||||||||||||||||    
T  31618988 aagtcctagttaatgtgctttaaacaatgttgaacctacaaagaggatcaaaaaaagaaaaatcaccacccactccttgccagtaagattgaatgcaaaa 31619087  T
Q  906 gtgttgtcaagttgatcttcatcatcatcagaat 939  Q
    ||||| ||||||||||||||||| ||||||||||    
T  31619088 gtgttatcaagttgatcttcatcgtcatcagaat 31619121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 865 - 947
Target Start/End: Original strand, 31608315 - 31608397
Alignment:
Q  865 aaatcaccacccactcattgccagtaagattgaatgcaaaagtgttgtcaagttgatcttcatcatcatcagaatcttttggt 947  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  31608315 aaatcaccactcactcattgccagtaagattgaatgcagaagtgttgtcaagttgatcttcatcatcatcagaattttttggt 31608397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 687 - 854
Target Start/End: Original strand, 31607232 - 31607398
Alignment:
Q  687 atttccaatccatttgccaattcattctacgtcttcattaaaatgaaag-aaaactgaaattctccaccataagaatacaaaaacaatatccattaatta 785  Q
    ||||||||||  |||| ||||||| | |||||||||||||||||||||| |||||| |||||| | || |||||||  | ||||||||||||| |||||     
T  31607232 atttccaatctttttgacaattcagtttacgtcttcattaaaatgaaagaaaaacttaaattcccaacaataagaacgccaaaacaatatccactaattt 31607331  T
Q  786 catgaaaaaattaattaaaacaagtcctaattaatgtgcattaaacaatgttgaacctacaaagaggat 854  Q
     |||  | | ||||||||| ||| | ||||||||||||| |||||||||||  ||||||||||||||||    
T  31607332 aatg--acatttaattaaatcaacttctaattaatgtgctttaaacaatgtcaaacctacaaagaggat 31607398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 21213880 - 21213787
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||| ||| ||||||||||||||||||| ||| || ||| |||| |||||||| ||||| |||||||||||||  |||||||||||||||||||    
T  21213880 aagcaaaactagcccacctaaattggcaccggggagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaataccacca 21213787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 756 - 824
Target Start/End: Original strand, 31612758 - 31612826
Alignment:
Q  756 taagaatacaaaaacaatatccattaattacatgaaaaaattaattaaaacaagtcctaattaatgtgc 824  Q
    ||||||| | ||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||    
T  31612758 taagaatgccaaaacaatatccattaatttcatgagaaaattaattaaaacaaatcctaattaatgtgc 31612826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 42327362 - 42327451
Alignment:
Q  28 gctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||||||||||| ||||||||| || ||| ||| |||| ||||||||| |||| || ||||||||||  |||||||||||||||||    
T  42327362 gctaaattagcccacccaaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccac 42327451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 29197339 - 29197434
Alignment:
Q  24 aaaagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||| |||||||||||||||||||||||| |||  | ||| ||||||||||| | ||||| || ||||||||||  ||||||| |||||||||||    
T  29197339 aaaagttaaattagcccacctaaattggcaccgggaagaatcgaacatgagacatcaaggaggagcacactcccaagtcccaagtcaataccacca 29197434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 12086094 - 12086187
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||||||||| ||| |||||  ||| ||||  |||||||| |||| || |||||| |||  |||||||||||||||||||    
T  12086094 aagctaaattagcccacctaaattagcaccggagggaatcgaacccgagaccttgaggaggagcacacttccaggtcccaagccaataccacca 12086187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 37480186 - 37480093
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||| ||||||| | ||| || ||| |||| ||||||||| |||| || ||||||| ||  |||||||||||||||||||    
T  37480186 aagctaaattagcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccacca 37480093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 42602665 - 42602574
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||||||||||||| ||||||||| |||||| |||  ||| | ||||||| || | || ||||||||||  |||||||||||||||||    
T  42602665 aagctaaattagcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccac 42602574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 2144500 - 2144463
Alignment:
Q  82 ggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2144500 ggaagaacacactcccatatcccaagccaataccacca 2144463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 25637258 - 25637182
Alignment:
Q  30 taaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaa 106  Q
    ||||||||||||||||||||||||||||||| ||  |||| ||||||||  || | || |||||||||| |||||||    
T  25637258 taaattagcccacctaaattggcatcggagagaaccgaacctgagacctcgagaaggagcacactcccagatcccaa 25637182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 909 - 947
Target Start/End: Original strand, 31612895 - 31612933
Alignment:
Q  909 ttgtcaagttgatcttcatcatcatcagaatcttttggt 947  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  31612895 ttgtcaagttgatcttcatcatcatcagaattttttggt 31612933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 37972006 - 37971956
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagac 76  Q
    |||||||||||||||||||||||||||| |||||| ||| |||| ||||||    
T  37972006 aagctaaattagcccacctaaattggcaccggagagaatcgaacctgagac 37971956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 39715103 - 39715009
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccaccat 120  Q
    ||||||||||||||||||||||||||    || || ||| |||| ||||||||  |||| || ||||||||||  ||||||| ||||||||||||    
T  39715103 aagctaaattagcccacctaaattggtgctggggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccat 39715009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 30410533 - 30410605
Alignment:
Q  45 aaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||||| | |||||||| ||||||||| |||| |||| || |||||||| |  |||||||||||||||||    
T  30410533 aaattggcaccagagaaaatcgaacatgagtccttgaggaggagcacactcctaggtcccaagccaataccac 30410605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 686 - 749
Target Start/End: Original strand, 31618659 - 31618723
Alignment:
Q  686 tatttccaatccatttgccaattcattctacgtcttcattaaaatgaaag-aaaactgaaattct 749  Q
    |||||| ||||||||||||| ||   | |||||||||||||||||||||| ||||||||||||||    
T  31618659 tatttcaaatccatttgccactttgatttacgtcttcattaaaatgaaagaaaaactgaaattct 31618723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 1435174 - 1435084
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||||||||||||| |||||| || | |||| ||| |||| ||||||||| ||||  | |||||||| | ||||||||||| ||||||    
T  1435174 aagctaaattagcccacccaaattgacaccagagagaatcgaac-tgagaccttgaggagaagcacactcctaaatcccaagccagtaccac 1435084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 11251194 - 11251107
Alignment:
Q  30 taaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||||| ||||||||||| || | |||| |||  ||| ||||||||| |||| || |||||| |||  |||||||||||||||||    
T  11251194 taaattagcacacctaaattgacaccagagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaataccac 11251107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 19016142 - 19016052
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacca 116  Q
    |||||||||||||| || |||||||||| ||| || |||  ||| ||||||||  |||| || ||||||||||  || |||||||||||||    
T  19016142 aagctaaattagcctacttaaattggcaccggggagaatcaaacttgagacctcgaggaggagcacactcccaagtctcaagccaatacca 19016052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 23052491 - 23052581
Alignment:
Q  29 ctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||||||||| ||| |||||   | || ||| |||| ||||||||| ||||  | ||||||||||  |||||||||||||||||||    
T  23052491 ctaaattagcccacccaaactggcactagggagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccacca 23052581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 38551881 - 38551807
Alignment:
Q  24 aaaagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactccca 98  Q
    |||| ||||||||||| | |||||||  ||||||||| ||| |||||  |||||||||| |||| ||||||||||    
T  38551881 aaaaactaaattagccaatctaaattaacatcggagagaatcgaacacaagaccttaagaaagagcacactccca 38551807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 7799001 - 7799093
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||| || ||||||||||  ||||| ||| |||  ||||| ||  |||| || ||||||||||  |||||||||||||||||||    
T  7799001 aagctaaattagcc-acttaaattggcactggagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaataccacca 7799093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 30359764 - 30359672
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||| ||||||||| |||||||||  || || ||| ||| |||||||||| |||| || |||||||| |  ||||||||||| |||||||    
T  30359764 aagctaaactagcccacccaaattggcactggggagaatcgaa-atgagaccttgaggaggagcacactccaaggtcccaagccaacaccacca 30359672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 31573610 - 31573699
Alignment:
Q  30 taaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||| |||||||||||| ||||| ||| ||| |||| |||||| | ||||| || ||||||| || ||| ||| |||||| |||||    
T  31573610 taaattagtccacctaaattgacatcgaagagaatcgaacctgagacatcaaggaggagcacactctcagatctcaaaccaatatcacca 31573699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 33582084 - 33582015
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactc 95  Q
    |||||||||||| |||||||||||| |||  |||| ||| |||| |||||||| ||||| || |||||||    
T  33582084 aagctaaattagtccacctaaattgacattagagagaatcgaacctgagacctcaaggaggagcacactc 33582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 37755936 - 37756029
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||  ||||||||||| |||  | | |||| ||||||||  || | || |||| |||||  |||||||||||||||||||    
T  37755936 aagctaaattagcccactcaaattggcatcagagggagtcgaacttgagacctcgagtaggagcacattcccaggtcccaagccaataccacca 37756029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 42420358 - 42420289
Alignment:
Q  48 ttggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||||||||  ||| |||||||||||||| || |||| ||||||| ||  ||| |||||||||||||    
T  42420358 ttggcatcggagggaatcgaacatgagaccttgagtaagagcacactctcaggtcctaagccaataccac 42420289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 1e-25; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 533 - 609
Target Start/End: Original strand, 16221874 - 16221950
Alignment:
Q  533 gttttatcccatgtttgaatttaactgacactagatatattataatattgtctccctcaactagggcgaaattctag 609  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| | |||||||||||    
T  16221874 gttttatcccatgtttgaatttaactgacactagatacatcataatattgtctccctcaactatgacgaaattctag 16221950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 968473 - 968380
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||||||||||||||||||||||||||||| ||| |||| ||||||||  |||| || ||||||||||  |||||||||||||||||||    
T  968473 aagctaaattagcccacctaaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccacca 968380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 533 - 608
Target Start/End: Original strand, 40114431 - 40114506
Alignment:
Q  533 gttttatcccatgtttgaatttaactgacactagatatattataatattgtctccctcaactagggcgaaattcta 608  Q
    ||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||| | ||||||||||    
T  40114431 gttttatcccatgtttgaatttaactgacactaaatacatcataatattgtctccctcaactatgacgaaattcta 40114506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 534 - 609
Target Start/End: Original strand, 41529018 - 41529093
Alignment:
Q  534 ttttatcccatgtttgaatttaactgacactagatatattataatattgtctccctcaactagggcgaaattctag 609  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||| | |||||||||||    
T  41529018 ttttatcccatgtttgaatttaactgacactagatacatcataatattgtctccctcgactatgacgaaattctag 41529093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 23361617 - 23361707
Alignment:
Q  29 ctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||||||| || | |||| |||||||| ||||||||| |||| || ||||||||||||||||||| |||||||||||    
T  23361617 ctaaattagcccacctaaattgacaccagagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccacca 23361707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 30774701 - 30774794
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||||||| ||| ||||||||||||||||||||| |||  ||||||||  |||| ||||||||| ||| ||||||| ||||||||||||    
T  30774701 aagctaaattagctcacttaaattggcatcggagaaaatcgaatctgagacctcgaggaggaacacacttccagatcccaaaccaataccacca 30774794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 2203603 - 2203512
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||||||||||||| ||||||||| ||| || |||||| | ||||||||| |||| || ||||||||||  |||||||||||||||||    
T  2203603 aagctaaattagcccacccaaattggcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaataccac 2203512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 6536631 - 6536540
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||||||| |||||||||||||||| | |||| |||||||| ||||||||| |||| || |||||||| |  |||||||||||||||||    
T  6536631 aagctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccac 6536540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 8485110 - 8485017
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||||||||||||| |||||| ||| ||| ||||||||| || || || ||||||| ||  |||||||| ||||||||||    
T  8485110 aagctaaattagcccacctaaattggcaccggagagaatcgaaaatgagacctcaaagaggagcacactcacaggtcccaagcaaataccacca 8485017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 28783171 - 28783078
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||| ||||||||| ||  || ||| |||||||||||||| |||| || ||||||||||  || ||||||||||||||||    
T  28783171 aagctaaattagcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccacca 28783078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 533 - 611
Target Start/End: Original strand, 36755191 - 36755269
Alignment:
Q  533 gttttatcccatgtttgaatttaactgacactagatatattataatattgtctccctcaactagggcgaaattctagtc 611  Q
    ||||||| ||||||||||||||||||||||||  ||| || ||| |||||||||||||||||| | ||||||| |||||    
T  36755191 gttttattccatgtttgaatttaactgacactgaatacatcatattattgtctccctcaactatgacgaaattttagtc 36755269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 3624692 - 3624600
Alignment:
Q  24 aaaagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||||||||||||||||||||||| |  |||||| ||| |||| ||||||||| | || || ||||||||||  |||||||||||||||||    
T  3624692 aaaagctaaattagcccacctaaattgacc-cggagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccac 3624600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 29858012 - 29858107
Alignment:
Q  24 aaaagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||||||||||||||| ||  |  ||| |||| ||||||||  |||| || |||||||||   |||||||||||||||||||    
T  29858012 aaaagctaaattagcccacctaaattggcaccgaggggaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccacca 29858107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 39642600 - 39642699
Alignment:
Q  20 ttgcaaaagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||| |||||||  ||||| | |||| || |||||| ||| ||| |||||||||||| ||||||||||||||| |||  |||||||| |||||||    
T  39642600 ttgcaaaagttaaattaatccacccagattgacaccggagagaatcgaagatgagaccttaatgaagaacacactcccctattacaagccaacaccacca 39642699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 3305147 - 3305241
Alignment:
Q  20 ttgcaaaagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatac 114  Q
    ||||| ||| |||||||||||||||||||||||| | |||| ||| |||  ||||||||| |||| || ||| |||||| ||||||| |||||||    
T  3305147 ttgcagaagataaattagcccacctaaattggcaccagagataatcgaatttgagaccttgaggaggagcacgctcccagatcccaaaccaatac 3305241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 11942859 - 11942940
Alignment:
Q  41 acctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccaccattat 123  Q
    |||| |||||||||| |||| |||||||| ||||||||||||||||| |||| | ||| ||| ||||||||||||| ||||||    
T  11942859 accttaattggcatcagagagaattgaac-tgagaccttaaggaagagcacatttccagatctcaagccaataccaacattat 11942940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 533 - 608
Target Start/End: Complemental strand, 24044317 - 24044244
Alignment:
Q  533 gttttatcccatgtttgaatttaactgacactagatatattataatattgtctccctcaactagggcgaaattcta 608  Q
    |||||||||||||||||||||||||| ||||  |||| ||||||||||| ||||| | ||||| | ||||||||||    
T  24044317 gttttatcccatgtttgaatttaactaacac--gatacattataatattatctcctttaactatgacgaaattcta 24044244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 22268899 - 22268991
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||| || ||||||||||| |||| ||||||||||  ||| ||||||||| | ||||| |||||||| |  ||||||||||| |||||||    
T  22268899 aagctaaactaacccacctaaatgggcaccggagaaaatcaaacttgagaccttga-gaagagcacactccaaggtcccaagccaacaccacca 22268991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 30483880 - 30483940
Alignment:
Q  57 gagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||| |||||||| ||||||  | |||| || |||||||||||||||||||||||||||||    
T  30483880 gagagaattgaacctgagactctgaggaggagcacactcccatatcccaagccaataccac 30483940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 11819887 - 11819796
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||||||||||||| |||||| ||   |||  ||| |||| ||||||||| |||| || ||||||||||  ||||||||| |||||||    
T  11819887 aagctaaattagcccacccaaattgacactagagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccac 11819796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 20112411 - 20112373
Alignment:
Q  208 gagtgaataggcaaaaacccctataaaattgtaactttc 246  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  20112411 gagtgaataggcaaaaacccctctgaaattgtaactttc 20112373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 7347948 - 7347883
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacac 91  Q
    ||||||||||||||||||||||||| ||   |||| |||||||| ||| |||| ||||| ||||||    
T  7347948 aagctaaattagcccacctaaattgacacaagagagaattgaacctgaaacctcaaggaggaacac 7347883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 19703450 - 19703543
Alignment:
Q  24 aaaagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||| ||||||||||||||| ||||| ||   | || ||| |||| ||||||||| |||| || ||||||| ||  |||||||||||||||||    
T  19703450 aaaagttaaattagcccaccttaattgacactagggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccac 19703543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 29431122 - 29431033
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacc 115  Q
    |||||||||||||||||  ||||| ||| |  ||| ||| |||| |||| ||| ||||| || ||||||||||  |||||||||||||||    
T  29431122 aagctaaattagcccactcaaattagcaccaaagagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaatacc 29431033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 35641866 - 35641959
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||| |||||||||    ||||| ||| |||| |||||| |  |||| || |||||||||| ||| |||||| |||||||||    
T  35641866 aagctaaattagcccatctaaattggttctggagagaatcgaacctgagacatcgaggaggagcacactcccaaatctcaagccgataccacca 35641959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 35690035 - 35690120
Alignment:
Q  32 aattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||| || ||||||| || | |||| ||| |||| ||||||||| |||| || || || |||| ||||||||||||||||||    
T  35690035 aattagcctacttaaattgacaccagagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaataccac 35690120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 2e-24; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 533 - 611
Target Start/End: Original strand, 32259395 - 32259473
Alignment:
Q  533 gttttatcccatgtttgaatttaactgacactagatatattataatattgtctccctcaactagggcgaaattctagtc 611  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| | ||||||| |||||    
T  32259395 gttttatcccatgtttgaatttaactgacactagatacatcataatattgtctccctcaactatgacgaaattttagtc 32259473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 16773918 - 16773825
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| ||||||||  |||| || ||||||||||  ||||||| |||||||||||    
T  16773918 aagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccacca 16773825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 29075892 - 29075801
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||||||||||| ||||||||||| | |||| ||| |||||||||| ||  |||| || |||||||||| ||||||||||||||||||    
T  29075892 aagctaaattagcccatctaaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccac 29075801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 534 - 609
Target Start/End: Complemental strand, 42631315 - 42631240
Alignment:
Q  534 ttttatcccatgtttgaatttaactgacactagatatattataatattgtctccctcaactagggcgaaattctag 609  Q
    ||||||||||||||||||||||||||||| |||||| ||  ||||||||||||||||||||| |  ||||||||||    
T  42631315 ttttatcccatgtttgaatttaactgacattagatacatcgtaatattgtctccctcaactatgatgaaattctag 42631240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 29692354 - 29692444
Alignment:
Q  29 ctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||| ||||| |||||||||||||||| |||| ||| |||||| || |||| || |||||||||| ||||||| ||||||||||||    
T  29692354 ctaaattagtccacccaaattggcatcggagagaattaaacctgagactttgaggaggagcacactcccagatcccaatccaataccacca 29692444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 43241645 - 43241738
Alignment:
Q  24 aaaagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||| |||||||| ||| |||||||||||||| ||| |||||||| |||||||| |||||||  |||||||| | |||||||| |||||||||    
T  43241645 aaaagttaaattagtccagctaaattggcatcgaagagaattgaacctgagacctcaaggaagggcacactccaagatcccaagtcaataccac 43241738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 12883953 - 12883861
Alignment:
Q  24 aaaagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacca 116  Q
    ||||||||||||| |||||| ||||||  || ||||| ||||||||||||||||| ||||| || |||||||||| ||||||| | |||||||    
T  12883953 aaaagctaaattaacccaccaaaattgatattggagagaattgaacatgagacctcaaggaggagcacactcccagatcccaacctaatacca 12883861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 533 - 608
Target Start/End: Complemental strand, 9022891 - 9022816
Alignment:
Q  533 gttttatcccatgtttgaatttaactgacactagatatattataatattgtctccctcaactagggcgaaattcta 608  Q
    ||||||| ||||||||||||||||||||||||| ||| || |||||||||||| | ||||||| | ||||||||||    
T  9022891 gttttataccatgtttgaatttaactgacactaaatacatcataatattgtcttcttcaactatgacgaaattcta 9022816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 119
Target Start/End: Complemental strand, 16457918 - 16457828
Alignment:
Q  29 ctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||| ||||||||  ||||||||| ||| || |||||||||||||||||| |||| || |||||||| |  |||||||||||||||||||    
T  16457918 ctaaactagcccacgcaaattggcaccggggagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagccaataccacca 16457828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 14495770 - 14495863
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||| ||||||| |||||||||||||||||| |||  ||  ||||||||  |||| || |||||||||| |||||||| |||||||||||    
T  14495770 aagctaaactagcccatctaaattggcatcggagagaatcaaatctgagacctcgaggaggagcacactcccagatcccaagtcaataccacca 14495863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 8278240 - 8278330
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacca 116  Q
    ||||||||||||||||||||||| |||| |||||| |||  ||| ||||| ||  |||| || ||||||||||  ||||||||||||||||    
T  8278240 aagctaaattagcccacctaaatcggcaccggagataatcaaacttgagatctcgaggaggagcacactcccaagtcccaagccaatacca 8278330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 30109274 - 30109366
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||||||||| ||| ||| | || | |||| |||||||| ||||| || ||||||||||  || ||||||||||||||||    
T  30109274 aagctaaattagcccacctaaattagcaccgggggaa-tcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaataccacca 30109366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 84935 - 84851
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagcca 110  Q
    |||||||||||||||||| | | ||||| ||| || ||| |||| ||||||||| |||| || |||||||||| |||||||||||    
T  84935 aagctaaattagcccacccataatggcaccggggagaatcgaacttgagaccttgaggaggagcacactcccagatcccaagcca 84851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 12877804 - 12877713
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||||||||||||||||||| | | | |||| ||| |||| |||||| || ||||  |||||||||||| ||||||| ||||| ||||    
T  12877804 aagctaaattagcccacctaaattagtaccagagagaatcgaacctgagacattgaggagaaacacactcccaaatcccaaaccaatgccac 12877713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 30883171 - 30883254
Alignment:
Q  34 ttagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||||| |||||| ||  || || |||||||| ||||||||| |||| || ||||||||||  |||||||||||||||||    
T  30883171 ttagcccacccaaattgacactggtgagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccac 30883254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 21549133 - 21549193
Alignment:
Q  57 gagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||| |||| |||||| ||||||| || ||||||||||  |||||||||||||||||    
T  21549133 gagaaaatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaataccac 21549193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 22020830 - 22020918
Alignment:
Q  29 ctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||||||||||||||||  ||  ||||| ||| |||  |||||| | ||||| || |||||||||| ||||||||| ||||||||    
T  22020830 ctaaattagcccacctaaattaacactggagagaatcgaatctgagacttcaaggaggagcacactcccagatcccaagctaataccac 22020918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 117
Target Start/End: Complemental strand, 43442304 - 43442216
Alignment:
Q  29 ctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||||||||| | |||||| || | |||| ||| |||| ||||||||| |||| || |||||||||| ||| ||| ||||||||||    
T  43442304 ctaaattagcccatccaaattgacaacagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaaaccaataccac 43442216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 5347723 - 5347761
Alignment:
Q  208 gagtgaataggcaaaaacccctataaaattgtaactttc 246  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  5347723 gagtgaataggcaaaaacccctctgaaattgtaactttc 5347761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 24907600 - 24907506
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccaccat 120  Q
    ||||||||||||||||||||||||||||||   || ||| |||| ||||| ||| |||| || || ||||| || || |||  ||||||||||||    
T  24907600 aagctaaattagcccacctaaattggcatcaaggataatcgaacctgagaacttgaggaggagcatactccaatgtctcaattcaataccaccat 24907506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 635 - 676
Target Start/End: Complemental strand, 1082459 - 1082418
Alignment:
Q  635 tttaaattgcatattccatttagtttgttaaatgaagaggat 676  Q
    |||||||||||| ||||||||| ||||| |||||||||||||    
T  1082459 tttaaattgcatcttccatttattttgtaaaatgaagaggat 1082418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 21589399 - 21589306
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||| ||||||||||||||||||| | |||  ||| |||| |||||| |  ||||  | || |||||||  |||||||||||||||||||    
T  21589399 aagctaaactagcccacctaaattggcaccagagggaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccacca 21589306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 22661325 - 22661276
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgaga 75  Q
    ||||||||||| | |||| ||||| ||||||||||||||||||| |||||    
T  22661325 aagctaaattaactcacccaaattagcatcggagaaaattgaacctgaga 22661276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 23270624 - 23270669
Alignment:
Q  34 ttagcccacctaaattggcatcggagaaaattgaacatgagacctt 79  Q
    |||||||||| ||||||||||||||| |||| |||| |||||||||    
T  23270624 ttagcccaccgaaattggcatcggaggaaatcgaacttgagacctt 23270669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 8e-24; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 10499074 - 10499167
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||| |||||| ||||||||| ||| |||| |||||||| |||||||| || ||||||| ||||||||||||||||||||    
T  10499074 aagctaaattagcccacccaaattgacatcggagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccacca 10499167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 533 - 609
Target Start/End: Complemental strand, 50239417 - 50239341
Alignment:
Q  533 gttttatcccatgtttgaatttaactgacactagatatattataatattgtctccctcaactagggcgaaattctag 609  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | | |||||||||||    
T  50239417 gttttatcccatgtttgaatttaactgacactagatacatcataatattgtctccctcaaccatgacgaaattctag 50239341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 16991653 - 16991560
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||||||||||| ||||||||||||||||| |||  ||  |||||||| || |||||  ||||||||| ||||||||||||||||||||    
T  16991653 aagctaaattagcccacataaattggcatcggagagaatcaaaactgagacctcaaagaagagtacactcccagatcccaagccaataccacca 16991560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 2667973 - 2667880
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||| |||||||||||||||| ||   |||| ||| |||| ||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  2667973 aagctaaactagcccacctaaattgacactagagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaataccacca 2667880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 12761623 - 12761530
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||| ||| ||||||||||||||||||| ||| |||||| |||| ||||| || ||||| |||||||||||||  ||||||| |||||||||||    
T  12761623 aagcaaaactagcccacctaaattggcaccggggaaaatcgaacctgagagctcaaggaggaacacactcccaggtcccaagtcaataccacca 12761530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 4844476 - 4844569
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||  ||||||||| |||||| ||| || | ||||||||  |||| || |||||||||| |||||||| |||||||||||    
T  4844476 aagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccacca 4844569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 4870172 - 4870265
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||  ||||||||| |||||| ||| || | ||||||||  |||| || |||||||||| |||||||| |||||||||||    
T  4870172 aagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccacca 4870265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 14339721 - 14339628
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||||||||||||| ||||||||   | || ||| |||| |||||| || |||| || |||||||||| ||||||||||||||||||||    
T  14339721 aagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaataccacca 14339628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 53714415 - 53714460
Alignment:
Q  240 aactttcccatagtggaaaagaatttccctttcccatgctaaactc 285  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  53714415 aactttcccatagtgggaaagaatttccctttcccatgctaaactc 53714460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 51903843 - 51903933
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacca 116  Q
    |||||||||||||||||  |||||| || |||||| ||| |||| |||||||   |||| || |||||||||| |||||||||||||||||    
T  51903843 aagctaaattagcccactcaaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaatacca 51903933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 11612410 - 11612317
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||| | ||||||||||||| ||| ||  || |||| |||||||||||||| || ||||||||||  |||||||  ||||||||||    
T  11612410 aagctaaattagtcgacctaaattggcaccggggagcatcgaacctgagaccttaaggaggagcacactcccagctcccaagtgaataccacca 11612317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 36720492 - 36720399
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||  ||||||||||||||| ||   |||| ||| |||| ||| ||||  |||| || |||||||||||||||||||||||||||||||    
T  36720492 aagctaaaccagcccacctaaattgacactagagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccacca 36720399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 44069869 - 44069776
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||| ||||||||||||||||||| |||| | |||  ||| ||||||||| |||| || |||||||| | ||| |||||||| |||||||    
T  44069869 aagctaaactagcccacctaaattggcaccggaaagaatcaaacctgagaccttgaggaggagcacactccaagatctcaagccaacaccacca 44069776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 47236936 - 47237029
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||| |||||||| ||||||||| ||| || ||| |||||||||||||| | || || |||||||||   |||||| ||||||||||||    
T  47236936 aagctaaataagcccacccaaattggcaccggggagaatcgaacatgagaccttgaagaggagcacactcccgggtcccaaaccaataccacca 47237029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 115
Target Start/End: Original strand, 47279389 - 47279458
Alignment:
Q  46 aattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacc 115  Q
    |||| |||| || |||||| ||||||||||||||||||| || |||||||||| ||||||||| ||||||    
T  47279389 aattagcattggggaaaatcgaacatgagaccttaaggaggagcacactcccagatcccaagcaaatacc 47279458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 44743820 - 44743904
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagcca 110  Q
    ||||||||||| |||||| |||||||||  ||||| ||| |||| ||||||||  |||| || |||||||||| |||||||||||    
T  44743820 aagctaaattaacccacccaaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccagatcccaagcca 44743904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 47454582 - 47454673
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||| || ||||||||||||||||| || || ||| |||| ||||||||  |||| || |||||||| | ||| ||||||||||||||    
T  47454582 aagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaataccac 47454673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 13448436 - 13448382
Alignment:
Q  24 aaaagctaaattagcccacctaaattggcatcggagaaaattgaacatgagacct 78  Q
    ||||||||||||||||||||||||||| ||   ||||||||||||| ||||||||    
T  13448436 aaaagctaaattagcccacctaaattgacagtagagaaaattgaacctgagacct 13448382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 17232245 - 17232164
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaag 107  Q
    |||||||| || ||||||  |||| || || |||| |||||||| |||||||||||||||||||| ||||| || |||||||    
T  17232245 aagctaaagtaacccacccgaattagcgtctgagagaattgaacctgagaccttaaggaagaacatactcctatgtcccaag 17232164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 111
Target Start/End: Complemental strand, 54990813 - 54990728
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaa 111  Q
    ||||||||||||||||||||||||| |||||  || ||| |||| ||||||||| |||| || ||| |||| |  |||||||||||    
T  54990813 aagctaaattagcccacctaaattgccatcgaggagaatcgaacctgagaccttgaggaggagcacgctccaaggtcccaagccaa 54990728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 28531023 - 28531111
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatac 114  Q
    |||||||||||||||||| |||||| || | |||| |||||| | | ||||||  |||| || || ||||||| |||||||||||||||    
T  28531023 aagctaaattagcccacccaaattgacaccagagagaattgagcctaagacctcgaggaggagcatactcccagatcccaagccaatac 28531111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 30232440 - 30232348
Alignment:
Q  27 agctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||||||||| | ||||||||| |||||| ||| |||| ||||||| | |||| || |||| | ||| ||| ||| ||||||||||||    
T  30232440 agctaaattagcccaaccaaattggcaccggagagaatggaacctgagaccatgaggaggagcacagttccagatcgcaaaccaataccacca 30232348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 32639051 - 32638963
Alignment:
Q  31 aaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||| |||| ||||||| ||  ||||||||| |||| ||||||||  | || |||||||||||||  | |||||||||||||||||    
T  32639051 aaattaggccacttaaattgacactggagaaaatcgaacctgagacctcgaagatgaacacactcccagtttccaagccaataccacca 32638963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 46518720 - 46518648
Alignment:
Q  45 aaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||||||| |||| |||  ||| ||| ||||| |||| || |||||||||| ||||||||||||||||||    
T  46518720 aaattggcatcagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccac 46518648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 19307880 - 19307931
Alignment:
Q  24 aaaagctaaattagcccacctaaattggcatcggagaaaattgaacatgaga 75  Q
    ||||| |||||||| |||||||||||| || |||| ||||||||||||||||    
T  19307880 aaaagataaattagtccacctaaattgacaccggaaaaaattgaacatgaga 19307931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 31520568 - 31520663
Alignment:
Q  24 aaaagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||||  |||||| ||  ||||| |||  ||| | ||||||  |||| || |||||||||| ||||||||||||| ||||||    
T  31520568 aaaagctaaattagcccactcaaattgacactggagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagccaatgccacca 31520663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 2597184 - 2597278
Alignment:
Q  26 aagctaaattag-cccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||| ||||||||||||  ||| | ||| | | |||| |||||||| ||||| || |||||||| | |||| |||||||||||||||    
T  2597184 aagctaaattagtcccacctaaatttacatagtagagattcgaacctgagacctcaaggaggagcacactcctaaatccgaagccaataccacca 2597278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 112
Target Start/End: Original strand, 10445104 - 10445190
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaat 112  Q
    |||||||||||||||||  ||||| ||| | |||| ||| |||| ||||||||  |||| || ||||||||||  ||||||||||||    
T  10445104 aagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaat 10445190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 19716308 - 19716214
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccaccat 120  Q
    |||||||||||||||||| |||||| || ||| || ||| ||||  |||||||| |||| || ||||||||    ||||||||||| ||||||||    
T  19716308 aagctaaattagcccacccaaattgtcaccggggagaatcgaaccagagaccttgaggaggagcacactccatggtcccaagccaacaccaccat 19716214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 31510686 - 31510776
Alignment:
Q  29 ctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||||||||||||||| ||| ||| || ||| |||| | ||||| || ||| || || |||||||  ||||||| |||||||||||    
T  31510686 ctaaattagcccacctaaattagcaccggggagaatcgaactttagaccgtatggaggagcatactcccaagtcccaagtcaataccacca 31510776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 33861699 - 33861773
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccata 100  Q
    |||||||||||||||||||||||||  || || || ||| |||||| ||||||  |||| || ||||||||||||    
T  33861699 aagctaaattagcccacctaaattgatattggggagaatcgaacattagacctcgaggaggagcacactcccata 33861773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 52769948 - 52770026
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatccc 104  Q
    ||||||||||||||||||||||||| ||    ||| ||| |||| |||||||| ||||| || |||||||||| |||||    
T  52769948 aagctaaattagcccacctaaattgacactaaagagaatcgaacctgagacctcaaggaggagcacactcccagatccc 52770026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 4222238 - 4222161
Alignment:
Q  40 cacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||||||| || | |||| ||| |||| | |||| || |||| || |||||||||| ||||||||||||||||||    
T  4222238 cacctaaattgacaccagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccac 4222161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 14186748 - 14186668
Alignment:
Q  36 agcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||||||||||| || |||||| ||| |||| ||||||||| |||| || |||||| |||  ||||||| |||||||||    
T  14186748 agcccacctaaattgacaccggagagaatcgaacctgagaccttgaggaggagcacact-ccaggtcccaagacaataccac 14186668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 17554842 - 17554789
Alignment:
Q  66 gaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||| |||| |||| ||||||| ||||||||||  |||||||||||||||||||    
T  17554842 gaacctgagcccttgaggaagagcacactcccaggtcccaagccaataccacca 17554789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 40063711 - 40063642
Alignment:
Q  45 aaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatac 114  Q
    |||||||||  ||||| ||| |||| |||||||||||||| || || |||| || |||||||||||||||    
T  40063711 aaattggcactggagagaatcgaacttgagaccttaaggaggagcatactctcagatcccaagccaatac 40063642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 40268599 - 40268507
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||| || |||||| ||||||||||||| || ||| |||| ||||||||||| || || | |||||| |  ||||||||||| |||||||    
T  40268599 aagctaaactaacccaccgaaattggcatcggggagaatcgaacctgagaccttaa-gaggagcccactccaaggtcccaagccaacaccacca 40268507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 43417389 - 43417336
Alignment:
Q  62 aattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacc 115  Q
    |||||||||||||||||| |||| || |||||||| | |||||||| |||||||    
T  43417389 aattgaacatgagaccttgaggatgatcacactccaagatcccaagacaatacc 43417336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 57; Significance: 3e-23; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 533 - 609
Target Start/End: Complemental strand, 34579 - 34503
Alignment:
Q  533 gttttatcccatgtttgaatttaactgacactagatatattataatattgtctccctcaactagggcgaaattctag 609  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||| | |||||||||||    
T  34579 gttttatcccatgtttgaatttaactgacactagatacatcataatattgtctccatcaactatgacgaaattctag 34503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 5e-22; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 533 - 611
Target Start/End: Complemental strand, 49878138 - 49878060
Alignment:
Q  533 gttttatcccatgtttgaatttaactgacactagatatattataatattgtctccctcaactagggcgaaattctagtc 611  Q
    ||||||||||||||||||||||||||||||||| |||  | |||||||||||||||||||||| | |||||||||||||    
T  49878138 gttttatcccatgtttgaatttaactgacactatatacgtcataatattgtctccctcaactatgacgaaattctagtc 49878060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 533 - 605
Target Start/End: Original strand, 45920630 - 45920702
Alignment:
Q  533 gttttatcccatgtttgaatttaactgacactagatatattataatattgtctccctcaactagggcgaaatt 605  Q
    ||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||| | |||||||    
T  45920630 gttttatcccatgtttgaatttaactgacactaaatacatcataatattgtctccctcaactatgacgaaatt 45920702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 51814605 - 51814515
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacca 116  Q
    |||||||||||||||||| ||||||||| |||||| ||| |||| ||||||||| |||| || ||||||| || ||| |||| ||||||||    
T  51814605 aagctaaattagcccacccaaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaatacca 51814515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 9643793 - 9643866
Alignment:
Q  45 aaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacc 118  Q
    |||||| || |||||| |||||||  ||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  9643793 aaattgacaccggagataattgaatctgagaccttgaggatgaacacactcccagatcccaagccaataccacc 9643866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 52116746 - 52116839
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||||||||||||| ||||||||   | || |||||||| |||||| || |||| || ||||||||||  |||||||||||||||||||    
T  52116746 aagctaaattagcccaccttaattggcactagggagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccacca 52116839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 21547449 - 21547536
Alignment:
Q  30 taaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||| ||||||||||||||||||||| |||| ||| |||| ||| ||||  |||| || ||| ||||||| |||||||||||||||||    
T  21547449 taaactagcccacctaaattggcatcagagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaataccac 21547536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 52336743 - 52336830
Alignment:
Q  30 taaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||||||| | |||||| || | |||| ||| |||| ||||| |||||||| || |||||||||| ||||||||||||||||||    
T  52336743 taaattagcccatccaaattgacaccagagataatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaataccac 52336830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 16893505 - 16893415
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacca 116  Q
    |||||||||||||||||  |||||| || |||||||||| |||| ||||||||  |||| ||  ||||||||| ||| |||||||||||||    
T  16893505 aagctaaattagcccactcaaattgacaccggagaaaatcgaacctgagacctcgaggaggagtacactcccaaatctcaagccaatacca 16893415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 952622 - 952529
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||||| ||||||||||||| |||||| || |||  ||| |||||| || |||| || ||||||||||  ||||||||||| |||||||    
T  952622 aagctaaattaacccacctaaattgacatcggggagaatctaacctgagactttgaggatgagcacactcccaggtcccaagccaacaccacca 952529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 12587380 - 12587288
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||||||||| ||| |||||| ||| |||| ||||||||  |||| || ||||||| || |||||||| ||||| |||||    
T  12587380 aagctaaattagcccacctaaatt-gcaccggagagaatcgaacctgagacctcgaggaggagcacactcacagatcccaagtcaatatcacca 12587288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 15065076 - 15065007
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactc 95  Q
    |||||||||||||||||| |||||| || ||| ||||||||||| ||||||||| |||| || |||||||    
T  15065076 aagctaaattagcccacccaaattgacaccggggaaaattgaacctgagaccttgaggatgagcacactc 15065007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 40257510 - 40257417
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||| ||||||||| |||||| || |||| | |||||||| ||||||||  |||| || ||||||||||  || ||||||||||||||||    
T  40257510 aagctaaactagcccacccaaattgacaccggatagaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccacca 40257417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 30203192 - 30203250
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaagga 84  Q
    ||||||||||||||  || |||||||||||||||| |||||||| ||||||||| ||||    
T  30203192 aagctaaattagccagccaaaattggcatcggagagaattgaacctgagaccttgagga 30203250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 42983339 - 42983433
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccaccat 120  Q
    |||||||||||| |||| |||||||||| | |||| ||| |||| |  ||||| ||||| || |||||||||| ||| |||| ||||||||||||    
T  42983339 aagctaaattagtccacttaaattggcacctgagagaatcgaacctcggacctcaaggaggaccacactcccagatctcaagtcaataccaccat 42983433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 9879545 - 9879456
Alignment:
Q  30 taaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||| |||||| |||  |||| ||| |||  |||||||| ||||||||  |||||| || ||||||||||||||| ||||    
T  9879545 taaattagcccacccaaattgacataagagataatcgaatctgagacctcaaggaagagtacactctcagatcccaagccaatacaacca 9879456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 33700756 - 33700829
Alignment:
Q  44 taaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||||| | |||| ||| |||| ||||||||| |||| || |||||||||| || |||||||||||||||    
T  33700756 taaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccac 33700829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 8177166 - 8177238
Alignment:
Q  45 aaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||||| | |||| ||| |||| ||| ||||| |||| || |||||||||| ||||||||||||||||||    
T  8177166 aaattggcaccagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccac 8177238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 9165179 - 9165251
Alignment:
Q  45 aaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||||| | |||| |||||||| |||||| || |||| || ||||||||||  |||||||||||||||||    
T  9165179 aaattggcaccagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccac 9165251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 31383771 - 31383855
Alignment:
Q  34 ttagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacc 118  Q
    |||||||||| ||||||||| |  ||| ||| |||| |||||||  ||||| || ||||||||||  ||||||||||||||||||    
T  31383771 ttagcccacccaaattggcacctaagagaatcgaacctgagaccccaaggaggagcacactcccaggtcccaagccaataccacc 31383855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 43446076 - 43446004
Alignment:
Q  24 aaaagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcc 96  Q
    |||||||||| ||||||||  ||||||||| ||| || ||| |||||||||||||| |||| || ||||||||    
T  43446076 aaaagctaaactagcccactcaaattggcaccggggagaatcgaacatgagaccttgaggaggagcacactcc 43446004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 6122905 - 6122814
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||||||||||||| |||||| ||   |||  ||| |||| ||||||||| |||| || ||||||||||  ||||||||| |||||||    
T  6122905 aagctaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccac 6122814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 28411423 - 28411348
Alignment:
Q  44 taaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||| | |||| |||||||  |||||||| || || || ||||||| ||||||||||| |||||||||||    
T  28411423 taaattggcaccagagagaattgaatctgagacctcaaagaggagcacactctcatatcccaagtcaataccacca 28411348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 31794229 - 31794320
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||||||||||||| |||||| || | |||  ||| ||||   ||||||| |||| || ||||||||||  |||||||||||||||||    
T  31794229 aagctaaattagcccacccaaattgacaccagagggaatcgaactctagaccttgaggaggagcacactcccaagtcccaagccaataccac 31794320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 48835096 - 48835139
Alignment:
Q  240 aactttcccatagtggaaaagaatttccctttcccatgctaaac 283  Q
    ||||||||||| |||||||| |||| ||||||||||||||||||    
T  48835096 aactttcccatggtggaaaacaattcccctttcccatgctaaac 48835139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 19940837 - 19940907
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcc 96  Q
    ||||||||  ||||||| |||||||||| |||||| |||  ||| |||||||||||||| || ||||||||    
T  19940837 aagctaaaccagcccacataaattggcaccggagagaatcaaacctgagaccttaaggaggagcacactcc 19940907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 27476736 - 27476826
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacca 116  Q
    ||||||||||||||||||||||| |||| | |||| |||  ||| ||||| ||  |||| || |||||||| |  ||||||||||||||||    
T  27476736 aagctaaattagcccacctaaatcggcaccagagagaatcaaacttgagatctcgaggaggagcacactcctaagtcccaagccaatacca 27476826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 48619178 - 48619268
Alignment:
Q  30 taaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccaccat 120  Q
    |||||||| ||||  |||||| || |||||| ||| |||| ||||| ||| ||||| ||||||||||||  || |||| ||||||||||||    
T  48619178 taaattagtccactcaaattgacaccggagataatagaacctgagatcttgaggaaaaacacactcccaagtctcaagtcaataccaccat 48619268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 112
Target Start/End: Complemental strand, 50901692 - 50901607
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaat 112  Q
    |||||||||||||||||||||||||||| | |||| ||| |||  ||||||||  |||| || |||||| |||  ||||||||||||    
T  50901692 aagctaaattagcccacctaaattggca-ctgagagaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaat 50901607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 1690082 - 1690135
Alignment:
Q  66 gaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||| |||||||| ||||| ||||| |||||||  |||||||||||||||||||    
T  1690082 gaacttgagacctcaaggaggaacagactcccaggtcccaagccaataccacca 1690135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 8904506 - 8904437
Alignment:
Q  45 aaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatac 114  Q
    ||||||||| | |||| ||| |||| ||||||||| |||| || ||||||| ||||||||||| ||||||    
T  8904506 aaattggcaccagagagaatcgaacttgagaccttgaggaggagcacactcacatatcccaagtcaatac 8904437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 18037578 - 18037627
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgaga 75  Q
    ||||||||||||||||||||||| |||| |||||| ||| |||| |||||    
T  18037578 aagctaaattagcccacctaaatcggcaccggagagaatcgaacttgaga 18037627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 34228984 - 34228892
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||| ||| ||||||||| ||||||||| |||||| |||  ||| ||||||||| || | ||||||||||| |  ||||||||||| |||||||    
T  34228984 aagccaaactagcccaccaaaattggcaccggagagaatccaacctgagaccttgag-aggaacacactccgaggtcccaagccaacaccacca 34228892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 34460877 - 34460942
Alignment:
Q  29 ctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacact 94  Q
    ||||||||| ||||||||||||| | | |||| |||||||  ||||||||| |||| |||||||||    
T  34460877 ctaaattagtccacctaaattggaaccagagataattgaatctgagaccttcaggaggaacacact 34460942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 37400385 - 37400292
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||| ||| ||| | ||||||||| |||| | ||| |||| |||||||||||||| || ||||||  ||  || ||||||||||||||||    
T  37400385 aagctaaactagtccatccaaattggcaccggatagaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaataccacca 37400292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 15288 - 15381
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| ||||||||  |||| || ||||||||||  |||||||||||||||||||    
T  15288 aagctaaattagcccacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccacca 15381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 53; Significance: 8e-21; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 533 - 609
Target Start/End: Original strand, 2980 - 3056
Alignment:
Q  533 gttttatcccatgtttgaatttaactgacactagatatattataatattgtctccctcaactagggcgaaattctag 609  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||  | |||||||||||    
T  2980 gttttatcccatgtttgaatttaactgacactagatacatcataatattgtctacctcaactttgacgaaattctag 3056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 3e-20; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 279919 - 280005
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaata 113  Q
    |||||||||||||||||| ||||||||| |||||| |||||||| |||||||||||||| ||  ||||||||| ||||||||||||||    
T  279919 aagctaaattagcccacccaaattggcaccggagagaattgaacctgagaccttaaggaggagtacactccca-atcccaagccaata 280005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 30579446 - 30579353
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||||||||||||| | |||||||| |||| ||||||||| |||| |   |||||||||  || ||||||||||||||||    
T  30579446 aagctaaattagcccacctaaattggcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccacca 30579353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 48772049 - 48771956
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||||||||||| |   | || ||| |||| |||||||| ||||| || |||||||||| ||||||||||||||||||||    
T  48772049 aagctaaattagcccacctaaattggtacttgggataatcgaacctgagacctcaaggaggagcacactcccagatcccaagccaataccacca 48771956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 11735446 - 11735530
Alignment:
Q  29 ctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaata 113  Q
    |||||||| ||||| ||||||| ||||||||| ||| |||||| | ||||||||||||| |||||||||| ||| ||||||||||    
T  11735446 ctaaattatcccacttaaattgtcatcggagagaatcgaacataaaaccttaaggaagaccacactcccaaatctcaagccaata 11735530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 45709673 - 45709764
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||| |||||||||||||||||| |||||||| ||| |||| ||||||||  |||| || ||||||| || ||||||||| ||||||||    
T  45709673 aagctaagttagcccacctaaattggtatcggagataatcgaacctgagacctcgaggaggagcacactctcagatcccaagctaataccac 45709764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 2446419 - 2446329
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacca 116  Q
    ||||||||||||||||||||||| |||| |||||| ||| |||| ||||| ||  |||| || ||||||||||  ||||||||||||||||    
T  2446419 aagctaaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaatacca 2446329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 42712069 - 42711978
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||||||||||||||||||||| ||   | || ||| |||||||||||||| |||| || ||||||||||| | |||||| ||||||||    
T  42712069 aagctaaattagcccacctaaattgacactagggagaatcgaacatgagaccttgaggaggagcacactcccatgtaccaagctaataccac 42711978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 22760967 - 22760881
Alignment:
Q  33 attagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||||  ||||||||||||| || ||| |||| ||||||||| |||| || ||||||||||  ||||||| |||||||||||    
T  22760967 attagcccactcaaattggcatcggggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccacca 22760881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 37085518 - 37085608
Alignment:
Q  30 taaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccaccat 120  Q
    ||||||||||||| |||||||| || || || ||| |||| ||| ||||  |||| || |||||||||| |||||||||||||||||||||    
T  37085518 taaattagcccacttaaattggtattggggagaatcgaacctgaaacctcgaggatgagcacactcccaaatcccaagccaataccaccat 37085608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 41487470 - 41487380
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||||||||||||| |||  | ||| |||| ||||||||| ||| |||  |||||||||  |||||||||||||||||||    
T  41487470 aagctaaattagcccacctaaattggcaccgggaagaatcgaacctgagaccttgagg-aga--acactcccaagtcccaagccaataccacca 41487380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 11720925 - 11721018
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||| |||||||||  || || ||| |||  ||| |||||||||| || |||| |||||  |||||||||||||||||||    
T  11720925 aagctaaattagcccacccaaattggcactggggagaatcgaatctgataccttaaggaggagcacattcccaggtcccaagccaataccacca 11721018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 19553564 - 19553472
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||| ||||||||||||||||| | ||| || |||||||| | ||||||| |||| || ||||||||||  | |||||||||||||||||    
T  19553564 aagctaaagtagcccacctaaattggaaccggggagaattgaacctaagaccttgaggaggagcacactcccaggt-ccaagccaataccacca 19553472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 43591018 - 43590925
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||||||||||||| ||||||||   | || ||| |||| |||||| || |||| || ||||||||||  |||||||||||||||||||    
T  43591018 aagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccacca 43590925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 26703233 - 26703149
Alignment:
Q  29 ctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaata 113  Q
    ||||||||||||||||||||||||||  | || || ||||| ||||||||  || | || |||||||||| ||||||||||||||    
T  26703233 ctaaattagcccacctaaattggcattagggataaatgaacctgagacctcgagaaggagcacactcccagatcccaagccaata 26703149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 24513904 - 24513817
Alignment:
Q  30 taaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||||||||| |||||| |||| | |||||| |||| |||||||| |||||  |  ||||||||| ||| ||||||||||||||    
T  24513904 taaattagcccacccaaattgacatcagtgaaaatcgaacctgagacctcaaggagaagtacactcccaaatctcaagccaataccac 24513817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 35513577 - 35513486
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||||||| |||||||||||  ||||||||||||| ||||||||||  |  |||| || ||||||| ||  |||||||| ||||||||    
T  35513577 aagctaaattagtccacctaaattaccatcggagaaaatcgaacatgagatatcgaggaggagcacactctcaagtcccaagcaaataccac 35513486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 41519230 - 41519320
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||||||||||||||||||||| || | |||| ||  |||| ||||||||| |||| || |||||||| | |||||||| |||||||||    
T  41519230 aagctaaattagcccacctaaattgaca-cagagagaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccac 41519320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 5934229 - 5934147
Alignment:
Q  29 ctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaa 111  Q
    ||||||||| |||||||||||| || | |||  ||| |||||||| |||| ||||| || |||||||||| ||||||||||||    
T  5934229 ctaaattagtccacctaaattgacaccagagggaatcgaacatgaaacctcaaggaggagcacactcccagatcccaagccaa 5934147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 25590722 - 25590632
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacca 116  Q
    |||||||||||||||||  |||||| || || ||||||| ||||  |||||||  |||| || |||||||||| ||| |||||||||||||    
T  25590722 aagctaaattagcccactcaaattgacaccgaagaaaatcgaacccgagacctcgaggaggagcacactcccagatctcaagccaatacca 25590632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 115
Target Start/End: Original strand, 20335800 - 20335885
Alignment:
Q  30 taaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacc 115  Q
    |||||||||||| | |||||| |||||| || ||| |||| ||||||||  |||| || ||||||||||  |||||||||||||||    
T  20335800 taaattagcccatccaaattgacatcggtgagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacc 20335885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 38374564 - 38374657
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||| ||||||||||||||||||| ||| || ||| |||| | ||||||| |||| || |||||||  |  ||||||||||| |||||||    
T  38374564 aagctaaactagcccacctaaattggcaccggggagaatcgaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccacca 38374657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 48125140 - 48125232
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||| ||| ||||||||| ||||||||| ||| ||||||||||| |||||||||  ||| || |||||||| |  ||||||||||| |||||||    
T  48125140 aagccaaactagcccaccgaaattggcaccggggaaaattgaacctgagacctt-cggaggagcacactccaaggtcccaagccaacaccacca 48125232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 26459394 - 26459466
Alignment:
Q  45 aaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||||| | |||| ||| |||| ||||||||| |||| || ||||||||||  |||||||||||||||||    
T  26459394 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccac 26459466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 37233582 - 37233630
Alignment:
Q  71 tgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||| || |||||||||| |||||||||||||| |||||    
T  37233582 tgagaccttaaggaggagcacactcccacatcccaagccaatatcacca 37233630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 119
Target Start/End: Complemental strand, 7801293 - 7801198
Alignment:
Q  24 aaaagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||| ||||||||||||| ||||||| ||||||||    | |||| ||||||||| | || || ||||||||||  ||||||| |||||||||||    
T  7801293 aaaagttaaattagcccacttaaattgacatcggaggggttcgaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccacca 7801198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 17040977 - 17041068
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||||||  |||||| |||||||||   |||| ||| |||| ||||||||| |||| || |||||| ||| ||||||||||||| ||||    
T  17040977 aagctaaattgacccacccaaattggcacttgagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccac 17041068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 39499724 - 39499775
Alignment:
Q  66 gaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||||||||||| || |||||||||| ||  |||||||||||||||||    
T  39499724 gaacatgagaccttaaagaggaacacactcacaggtcccaagccaataccac 39499775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 45976892 - 45976979
Alignment:
Q  30 taaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||| || || |||||||||||| |||| || ||||| | | |||||||||| || ||||||||||  || ||||||||||||||    
T  45976892 taaattaacctacttaaattggcatcagagataaatgaacttaaaaccttaaggaggagcacactcccaggtcacaagccaataccac 45976979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 3280451 - 3280544
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccaccat 120  Q
    |||||||||||| ||| ||||||||||| ||| || ||| |||  ||||||||| |||| || ||||||| |   ||||||||||||||||||||    
T  3280451 aagctaaattagtccatctaaattggcaccggggataatcgaat-tgagaccttgaggaggagcacactctcgggtcccaagccaataccaccat 3280544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 5668536 - 5668626
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacca 116  Q
    ||||||||||||||||| ||||||  |  |||||| ||| || | ||||||||  |||| || |||||| |||| ||||||||||||||||    
T  5668536 aagctaaattagcccacataaattaactccggagagaatcgatcctgagacctcgaggaggagcacacttccatgtcccaagccaatacca 5668626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 282
Target Start/End: Complemental strand, 6729447 - 6729405
Alignment:
Q  240 aactttcccatagtggaaaagaatttccctttcccatgctaaa 282  Q
    |||||||||||||||||||| ||||  ||||||||||||||||    
T  6729447 aactttcccatagtggaaaacaattctcctttcccatgctaaa 6729405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 14629868 - 14629818
Alignment:
Q  240 aactttcccatagtggaaaagaatttccctttcccatgctaaactctacca 290  Q
    |||||||||||  |||||||||| ||||||||||||| |||||||| ||||    
T  14629868 aactttcccatgatggaaaagaacttccctttcccatactaaactccacca 14629818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 119
Target Start/End: Complemental strand, 15137661 - 15137571
Alignment:
Q  29 ctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||||||||| |||||| || | |||| |||  ||| ||||||||| |||| || |||||||| | |||||||| || ||||||||    
T  15137661 ctaaattagcccacccaaattgacaccagagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccacca 15137571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 18056743 - 18056833
Alignment:
Q  29 ctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||||||||| ||||| ||| ||| || ||| |||| ||||||||| |||| || |||||||| |   |||||| |||||||||||    
T  18056743 ctaaattagcccacccaaattagcaccggggagaatcgaacctgagaccttcaggaggagcacactccgaagacccaagtcaataccacca 18056833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 21558239 - 21558181
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaagga 84  Q
    ||||||||||| |||||||||||||||| | |||| ||| |||| ||||||||| ||||    
T  21558239 aagctaaattaacccacctaaattggcaccagagagaatcgaacctgagaccttgagga 21558181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 631 - 677
Target Start/End: Complemental strand, 30153192 - 30153146
Alignment:
Q  631 tctctttaaattgcatattccatttagtttgttaaatgaagaggatc 677  Q
    |||||| ||||||||||||||||||  ||||||||||| ||||||||    
T  30153192 tctcttcaaattgcatattccatttgttttgttaaatggagaggatc 30153146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 48582802 - 48582860
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaagga 84  Q
    ||||||||||||| |||| ||||||||||| |||| | |||||| ||||||||| ||||    
T  48582802 aagctaaattagctcacccaaattggcatcagagagagttgaacttgagaccttgagga 48582860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 2883052 - 2882991
Alignment:
Q  35 tagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcc 96  Q
    |||||||||||||||| || | |||| |||||||| ||||||||| |||| || ||||||||    
T  2883052 tagcccacctaaattgccaccagagagaattgaacctgagaccttgaggaggagcacactcc 2882991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 5273555 - 5273648
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||| ||||||||| ||||||||| |||||| |||  ||| | ||||||| |||| || |||||||  |  ||||||||||| |||||||    
T  5273555 aagctaaactagcccacccaaattggcaccggagacaatcaaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccacca 5273648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 539 - 608
Target Start/End: Complemental strand, 7939702 - 7939633
Alignment:
Q  539 tcccatgtttgaatttaactgacactagatatattataatattgtctccctcaactagggcgaaattcta 608  Q
    |||||||||||||||||||||||||  |||| || ||| |||| ||||| |||| || | ||||||||||    
T  7939702 tcccatgtttgaatttaactgacaccggatacatcatactattatctccttcaattatgacgaaattcta 7939633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 8108652 - 8108599
Alignment:
Q  66 gaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||| |||||||| ||||| || | ||||||||||||||||| |||||||||||    
T  8108652 gaacctgagacctcaaggaggagcgcactcccatatcccaagtcaataccacca 8108599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 15905639 - 15905727
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacc 115  Q
    ||||||||||| |||||| |||||| |||  | || ||| |||| |||||||| ||||| || ||||||||||  |||||||||||||||    
T  15905639 aagctaaattaacccacccaaattgacattagggagaatcgaacctgagacct-aaggaggagcacactcccaggtcccaagccaatacc 15905727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 5e-19; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 533 - 610
Target Start/End: Original strand, 14211598 - 14211675
Alignment:
Q  533 gttttatcccatgtttgaatttaactgacactagatatattataatattgtctccctcaactagggcgaaattctagt 610  Q
    ||||| |||||||||||||||||||| |||||||||| || |||||||||||||||||||||| |  |||||||||||    
T  14211598 gttttgtcccatgtttgaatttaactaacactagatacatcataatattgtctccctcaactatgatgaaattctagt 14211675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 33549215 - 33549122
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||||||| |||||||||||||||| |||| ||| |||| ||||||||  |||| || ||||||||||  |||||||||||||||||||    
T  33549215 aagctaaattagctcacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccacca 33549122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 6385973 - 6385881
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacc 118  Q
    |||||||||||||||||| ||||| ||| |||||| ||| |||| |||||||||||||| || |||| |||||  ||||||| ||||||||||    
T  6385973 aagctaaattagcccacccaaattagcaccggagagaatcgaacctgagaccttaaggaggagcacagtcccaggtcccaagtcaataccacc 6385881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 30127511 - 30127418
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||||| || ||||||||||||| |||| | ||| |||| ||||||||  | || || |||||||||| | ||||||||||||||||||    
T  30127511 aagctaaattaacctacctaaattggcaccggaaagaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccacca 30127418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 8597712 - 8597770
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaagga 84  Q
    |||||||||||||||||| |||||||||  ||||| |||||||| ||||||||| ||||    
T  8597712 aagctaaattagcccacccaaattggcactggagagaattgaacttgagaccttgagga 8597770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 24333990 - 24334080
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacca 116  Q
    |||||||| ||||||||| ||||||||| ||| || |||||||| ||||||||| |||| || || ||| | || ||||||||||| ||||    
T  24333990 aagctaaactagcccacccaaattggcaccggtgagaattgaacctgagaccttgaggaggagcatactgcaatgtcccaagccaacacca 24334080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 6758387 - 6758480
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||| |||||||||||||| || | |||| ||| || | ||||||||  |||  || |||||||||| |||| |||||||||||||||    
T  6758387 aagctaaatttgcccacctaaattgacaccagagagaatcgatcttgagacctcgaggtggagcacactcccaaatcctaagccaataccacca 6758480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 21418581 - 21418488
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||||||||||||| ||||||||   | || ||| |||| |||||| |  |||| || ||||||||||  |||||||||||||||||||    
T  21418581 aagctaaattagcccaccttaattggcactagggagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagccaataccacca 21418488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 12633120 - 12633028
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacc 118  Q
    |||||||||||| |||| ||||||| ||| ||||| ||| |||||||||| ||  | || || |||||||||| |||||||| ||||| ||||    
T  12633120 aagctaaattagtccacttaaattgacattggagagaatcgaacatgagatctcgaagaggagcacactcccaaatcccaagtcaatatcacc 12633028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 118
Target Start/End: Original strand, 31622956 - 31623048
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacc 118  Q
    |||||||||||||||||| |||||| || |||||  | |  ||| ||||||||  |||| || ||||||||||  ||||||||||||||||||    
T  31622956 aagctaaattagcccacccaaattgacaccggagtgattcaaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccacc 31623048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 21943395 - 21943480
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaata 113  Q
    ||||||||||| ||||||||||||||| ||||||  |||||||| | ||||||  ||||||||||||||| ||  ||||||| |||||    
T  21943395 aagctaaattaacccacctaaattggc-tcggag-gaattgaaccttagacctcgaggaagaacacactctcaggtcccaagtcaata 21943480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 30709491 - 30709529
Alignment:
Q  208 gagtgaataggcaaaaacccctataaaattgtaactttc 246  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  30709491 gagtgaataggcaaaaacccctctgaaattgtaactttc 30709529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 20744504 - 20744565
Alignment:
Q  56 ggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||| ||| |||||||||||||| |||| ||||||||| |||||||  || ||||||||||    
T  20744504 ggagataatcgaacatgagaccttgaggaggaacacacttccatatcaaaatccaataccac 20744565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 1e-16; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 51250487 - 51250580
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||| ||||||||| |||||  ||| |||| ||||| ||| |||  || |||||||||| ||||||||||||||||||||    
T  51250487 aagctaaattagcccacccaaattggcaccggagggaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccacca 51250580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 533 - 609
Target Start/End: Complemental strand, 6552065 - 6551989
Alignment:
Q  533 gttttatcccatgtttgaatttaactgacactagatatattataatattgtctccctcaactagggcgaaattctag 609  Q
    |||||||| |||||||||||||||||||||||| ||| || ||||||||||||||||| |||| |  ||||||||||    
T  6552065 gttttatctcatgtttgaatttaactgacactacatacatcataatattgtctccctcgactatgatgaaattctag 6551989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 19531969 - 19532057
Alignment:
Q  28 gctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacca 116  Q
    |||||||||||||||||||||||||||| |||| ||| |||| ||| | |||||||| || ||| |||| || ||||||||||||||||    
T  19531969 gctaaattagcccacctaaattggcatcagagagaatcgaacctgaaaacttaaggaggagcacgctcctatgtcccaagccaatacca 19532057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 533 - 608
Target Start/End: Complemental strand, 312235 - 312160
Alignment:
Q  533 gttttatcccatgtttgaatttaactgacactagatatattataatattgtctccctcaactagggcgaaattcta 608  Q
    ||||||||||| |||||||||||||||||| || ||| || |||||||||| ||||||||||| | ||||||||||    
T  312235 gttttatcccacgtttgaatttaactgacaataaatacatcataatattgtatccctcaactatgacgaaattcta 312160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 7949419 - 7949508
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacc 115  Q
    ||||||||||||||||||||||||| || | |||| ||| |||| ||||||||| |||| || |||||||| |  |||||||||||||||    
T  7949419 aagctaaattagcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaatacc 7949508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 13015538 - 13015447
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||||||| ||||||||||||| || | |||| ||| ||||||||||| |  |||| || ||||||||||  |||||||||||||||||    
T  13015538 aagctaaattaacccacctaaattgacacctgagagaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagccaataccac 13015447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 13901853 - 13901762
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||||||| ||||||||||||  |||  || | |||||||| |||||||| ||||| |||||||||||||  || ||||||||||||||    
T  13901853 aagctaaattaacccacctaaattaacattagatagaattgaacttgagacctcaaggaggaacacactcccaggtctcaagccaataccac 13901762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 42815662 - 42815736
Alignment:
Q  29 ctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcc 103  Q
    |||||| |||||||  |||||||||||  ||  ||| ||||||||||||||||||||||||||||||||| ||||    
T  42815662 ctaaataagcccacacaaattggcatcaaagtgaatcgaacatgagaccttaaggaagaacacactcccagatcc 42815736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 19238542 - 19238635
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||| ||||||| | ||| || ||| ||||  |||||||  |||| || ||||||||||  |||||||||||||||||||    
T  19238542 aagctaaattagcccacccaaattggtaccggggagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccacca 19238635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 28635807 - 28635714
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||| ||||||||| | |||| ||| |||| | ||||||  |||| || |||||||||| |||||||| || ||||||||    
T  28635807 aagctaaattagcccacccaaattggcaccagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccacca 28635714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 111
Target Start/End: Complemental strand, 46295208 - 46295123
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaa 111  Q
    |||||||| ||||||||| ||||||||| ||| || ||| |||| ||||||||| |||| || |||||||| || |||||||||||    
T  46295208 aagctaaactagcccacccaaattggcaccggggagaatcgaacctgagaccttgaggaggagcacactccaatgtcccaagccaa 46295123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 24234755 - 24234664
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacc 118  Q
    |||||||||||||| |||||| ||| | || |||| ||| |||| ||||||||| |||| || ||||||||||  ||||||||||||||||||    
T  24234755 aagctaaattagcctacctaatttgac-tctgagagaatcgaacttgagaccttcaggatgagcacactcccaagtcccaagccaataccacc 24234664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 42644875 - 42644963
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatac 114  Q
    |||||||||||| ||| | ||||| |||| ||||| ||| |||| |||||| || ||||||||||||||| || |||||||| ||||||    
T  42644875 aagctaaattagtccaaccaaattagcattggagataatcgaacctgagactttgaggaagaacacactctcagatcccaagtcaatac 42644963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 30938184 - 30938275
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||| || ||||||||||||||||| || || ||| |||| ||||||||  |||| || |||||||| | ||||||| ||||||||||    
T  30938184 aagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatcccaaaccaataccac 30938275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 39509182 - 39509091
Alignment:
Q  25 aaagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacca 116  Q
    |||||||||||| ||||||||||||| ||  || || ||| |||| ||||||||  |||| || |||||||||| ||||||||||| |||||    
T  39509182 aaagctaaattaacccacctaaattgccactggggagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccattacca 39509091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 112
Target Start/End: Original strand, 37274424 - 37274510
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaat 112  Q
    ||||||||||||||||| |||||| ||| | |||| ||| |||| | ||||||| |||| || ||||||||||  ||||||||||||    
T  37274424 aagctaaattagcccacttaaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaat 37274510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 14451711 - 14451792
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaag 107  Q
    ||||||||||| ||||| ||||||| || |||  |||||||||| | ||||||| |||| || ||||||| |||||||||||    
T  14451711 aagctaaattatcccacttaaattgacaccgggaaaaattgaacctaagaccttgaggaggagcacactctcatatcccaag 14451792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 21660109 - 21660202
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||| | |||||||||| ||   |||| ||| |||| ||||||||  ||||||| |||||||||| ||| |||| |||||||||||    
T  21660109 aagctaaattagtctacctaaattgacactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccacca 21660202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 21668873 - 21668966
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||| | |||||||||| ||   |||| ||| |||| ||||||||  ||||||| |||||||||| ||| |||| |||||||||||    
T  21668873 aagctaaattagtctacctaaattgacactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccacca 21668966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 49576867 - 49576952
Alignment:
Q  34 ttagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||| ||||| |||||| ||| ||||| ||| |||| ||||||||| |||| || ||||||||||  ||| |||||||||||||||    
T  49576867 ttagtccacccaaattgacattggagagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaataccacca 49576952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 55427165 - 55427258
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||| ||||||||| ||  || ||| |||| ||||||||  || | || || |||||||  |||||||||||||||||||    
T  55427165 aagctaaattagcccacccaaattggcaccgcggagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccacca 55427258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 37109335 - 37109407
Alignment:
Q  45 aaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||||| | |||| ||| |||| ||||||||| |||| || ||||||||||  |||||||||||||||||    
T  37109335 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccac 37109407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 38869860 - 38869788
Alignment:
Q  45 aaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    ||||||||| | |||  ||| |||| ||||||||| |||| || |||||||||| ||||||||||||||||||    
T  38869860 aaattggcaccagagggaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaataccac 38869788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 43728507 - 43728412
Alignment:
Q  24 aaaagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccaccat 120  Q
    ||||||||||||||||||||||| ||| ||  ||| | |||||||| |||||| || |||| || |||||||||| |||  ||| ||||||||||||    
T  43728507 aaaagctaaattagcccacctaagttgacactgga-agaattgaacctgagactttgaggaggagcacactcccagatcataagtcaataccaccat 43728412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 8030169 - 8030260
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||||||||||||| |||||| ||   |||  ||| |||| ||||||||| |||| || ||||||||||  ||||||||| |||||||    
T  8030169 aagctaaattagcccacccaaattgacactagagggaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcctataccac 8030260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 24124038 - 24124108
Alignment:
Q  44 taaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatac 114  Q
    |||||||||| || ||| ||| |||| | |||||| ||||| || |||||||||| |||||||||||||||    
T  24124038 taaattggcaccgaagataatcgaacctcagacctcaaggaggaccacactcccaaatcccaagccaatac 24124108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 52254369 - 52254459
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacca 116  Q
    |||||||| |||||| |||| |||||||  ||||| |||  ||| ||| |||| ||||| || ||||||| ||||||||||| ||||||||    
T  52254369 aagctaaactagcccgcctacattggcactggagagaatctaacctgaaacctcaaggaggagcacactctcatatcccaagtcaatacca 52254459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 56236899 - 56236973
Alignment:
Q  45 aaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||||||||| |||| |||  | || | |||| || || ||||||||||||||||||| |||||||||||    
T  56236899 aaattggcatcggaggaaatcgaatctaaggctttaaagaggagcacactcccatatcccaagtcaataccacca 56236973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 4482317 - 4482406
Alignment:
Q  30 taaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||| | ||||||||||||| || ||| |||  ||| |||||||  || ||||||||| || |||  |||||||||||||||    
T  4482317 taaattagcccatccaaattggcatcggggagaatcgaatctgacaccttaaataaaaacacactctcagatcataagccaataccacca 4482406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 12822079 - 12821986
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    ||||||||||| || ||||||||| | ||||||| |||| |||  ||||||||| |  | || |||||||||| |||||||| ||||| |||||    
T  12822079 aagctaaattaacctacctaaattagaatcggaggaaatcgaatctgagaccttgaacaggagcacactcccagatcccaagtcaatatcacca 12821986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 17618392 - 17618299
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||| ||||| |||||||||||   |||||  ||  |||||||||||||  |||| || ||||||||||  || ||||||||||||||||    
T  17618392 aagctaaactagccaacctaaattggtgccggagggaaacgaacatgagacctcgaggaggagcacactcccaggtctcaagccaataccacca 17618299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 53
Target Start/End: Original strand, 29312227 - 29312256
Alignment:
Q  24 aaaagctaaattagcccacctaaattggca 53  Q
    ||||||||||||||||||||||||||||||    
T  29312227 aaaagctaaattagcccacctaaattggca 29312256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 34372278 - 34372323
Alignment:
Q  240 aactttcccatagtggaaaagaatttccctttcccatgctaaactc 285  Q
    |||||||||||||| ||||| |||| |||||||||||| |||||||    
T  34372278 aactttcccatagttgaaaacaattcccctttcccatgttaaactc 34372323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 46545824 - 46545731
Alignment:
Q  24 aaaagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||| ||||||||| ||| |||||||| |||| |||||||| |||  ||||| ||| |||| || ||||||| ||  || ||||||||||||||    
T  46545824 aaaaactaaattagtccatctaaattgacatcagagaaaatcgaatctgagatcttgaggaggagcacactctcaggtctcaagccaataccac 46545731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 51954225 - 51954132
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||| |||||| || |||||| |||  ||| ||||||||  |||| || || |||||||  ||||||| |||| ||||||    
T  51954225 aagctaaattagcccacccaaattgacaccggagataatcaaacctgagacctcgaggaggagcatactcccaagtcccaagtcaatgccacca 51954132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 13021 - 13104
Alignment:
Q  36 agcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||| |||||| ||||||||| ||| |||| ||||||||| |||| || |||||||||| ||| ||||||||||||||||    
T  13021 agcccacccaaattgacatcggagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaataccacca 13104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 533 - 605
Target Start/End: Original strand, 20612 - 20687
Alignment:
Q  533 gttttatcccatgtttgaatttaactgac---actagatatattataatattgtctccctcaactagggcgaaatt 605  Q
    |||||||||||||||||||||||||||||   |||| ||| || |||||||||||||||||||||| | |||||||    
T  20612 gttttatcccatgtttgaatttaactgacactactacatacatcataatattgtctccctcaactatgacgaaatt 20687  T

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Target: scaffold0101 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 43294 - 43391
Alignment:
Q  23 caaaagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccaccat 120  Q
    |||||| |||||||||||| | |||||| ||  | ||  ||| ||||||||||||||||| | |||||||||||||  ||||||||||||||||||||    
T  43294 caaaagttaaattagcccatccaaattgacactgaagggaatcgaacatgagaccttaagaaggaacacactcccaagtcccaagccaataccaccat 43391  T

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Target: scaffold0032 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 112393 - 112300
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||| ||||||||||||||| |||||| ||| |||| | |||||| || || || |||||||||| || |||||||||||| ||||    
T  112393 aagctaaattagtccacctaaattggcaccggagagaatcgaacctcagacctcaaagaggaccacactcccagattccaagccaatacaacca 112300  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 19812 - 19902
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacca 116  Q
    |||||||| ||||||||| |||||  ||||||| | ||| |||| |||||||| ||||| || || ||||||| |||||||||||||||||    
T  19812 aagctaaactagcccacccaaattaacatcggaaagaatcgaacttgagacctcaaggaggagcagactcccagatcccaagccaatacca 19902  T

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Target: scaffold0172 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 15742 - 15835
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||||||||||||| ||||||||| ||  || |||  ||| ||||||||| |||| || || ||||| | ||||||||||||||||||||    
T  15742 aagctaaattagcccacccaaattggcaccgcggagaatcaaacttgagaccttgaggaggagcatactccaaaatcccaagccaataccacca 15835  T

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Target: scaffold0118 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 41600 - 41689
Alignment:
Q  28 gctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||||||||||| |||||| |||| |||| |||||||| ||||||||  |||| || || |||| || ||| ||||||||||||||    
T  41600 gctaaattagcccacccaaattgacatcagagagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaataccac 41689  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 94954 - 95027
Alignment:
Q  44 taaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccac 117  Q
    |||||||||| | |||| |||||||| ||||||||| |||| || ||||||||||  | |||||||||||||||    
T  94954 taaattggcaccagagataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaataccac 95027  T

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Target: scaffold0074 (Bit Score: 33; Significance: 0.000000007; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 45736 - 45812
Alignment:
Q  38 cccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatac 114  Q
    ||||||||||||| || | |||| ||| ||||||||||||| ||||| ||||||||||| |  ||||||| ||||||    
T  45736 cccacctaaattgacaccagagagaatcgaacatgagacctcaaggaggaacacactcctaggtcccaaggcaatac 45812  T

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Target: scaffold0471 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 8625 - 8695
Alignment:
Q  44 taaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatac 114  Q
    |||||||||| || ||| ||| |||| | |||||| ||||| || |||||||||| |||||||||||||||    
T  8625 taaattggcaccgaagataatcgaacctcagacctcaaggaggaccacactcccaaatcccaagccaatac 8695  T

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Target: scaffold0299 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 119
Target Start/End: Complemental strand, 11608 - 11546
Alignment:
Q  57 gagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||| ||| |||| ||||||||  |||| || |||||||||| ||||||||||||||||||||    
T  11608 gagagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaataccacca 11546  T

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Target: scaffold0517 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 7691 - 7784
Alignment:
Q  26 aagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaataccacca 119  Q
    |||||||| ||| ||| | ||||||||| |||| | ||| |||| |||||||||||||| || ||||||  ||  || ||||||||||||||||    
T  7691 aagctaaactagtccatccaaattggcaccggatagaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaataccacca 7784  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 156952 - 157042
Alignment:
Q  24 aaaagctaaattagcccacctaaattggcatcggagaaaattgaacatgagaccttaaggaagaacacactcccatatcccaagccaatacca 116  Q
    |||||||||||||||||||  |||||| || || ||||||| |||| |  |||||  |||| || |||||||||| ||| |||||||||||||    
T  156952 aaaagctaaattagcccactcaaattgacaccgaagaaaatcgaacct--gacctcgaggaggagcacactcccagatctcaagccaatacca 157042  T

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