View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2024-Insertion-13 (Length: 337)
Name: NF2024-Insertion-13
Description: NF2024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2024-Insertion-13 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 43867719 - 43867384
Alignment:
| Q |
8 |
tgttgaaactagacaatgtgatgaaggagacacactagtgtcagtaggtacnnnnnnnnctt------ctctctgcccatgcacttttggtaatttgcta |
101 |
Q |
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| T |
43867719 |
tgttgaaactagacaatgtgatgaaggagacacactagtgtcagtaggtactttttttttttttttttctctctgcccatgcacttttggtaatttgcta |
43867620 |
T |
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| Q |
102 |
caggaatattaatggaggttaatgggacccaccaattggtatgatcttagtgttgattggctagagagttgaagttaatcttattctctgaattctaatt |
201 |
Q |
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| T |
43867619 |
caggaatattaatggaggttaatgggacccaccaattggtatgatcttagtgttgattggctagagagttgaagttaatcttattctctgaattctaatt |
43867520 |
T |
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| Q |
202 |
ggttgtctttttaattataggatttcttatggacccattagggtttgtgcattaaatttttgagtaagacatatttgttgtgttacatgtataataattc |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43867519 |
ggttgtctttttaattataggatttcttatggacccattagggtttgtgcattaaatttttgagtaagacatatttgttgtgttacatgtataataattc |
43867420 |
T |
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| Q |
302 |
aataatgtctgctatttgaggtcccctctccttagg |
337 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
43867419 |
aataatgtctgctatttgaggtcccctctccttagg |
43867384 |
T |
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