View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2024-Insertion-14 (Length: 328)
Name: NF2024-Insertion-14
Description: NF2024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2024-Insertion-14 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 8 - 328
Target Start/End: Original strand, 34594172 - 34594491
Alignment:
| Q |
8 |
aggtaaaccccattttcatcgcaaacttgacacaaaacttcactaaagaaaaatgaatctttcnnnnnnnnnttgatcataccaaggaagattctgatgc |
107 |
Q |
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| T |
34594172 |
aggtaaaccccattttcatcgcaaacttgacacaaaacttcactaaagaaaaatgaatctttcaaaaaaa--ttgatcataccaaggaagattctgatgc |
34594269 |
T |
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| Q |
108 |
agtctttggcctcaactccagcatctacaaaacgcaatgaaaa-tatcgtataaatcacagcaaaatgacgaaacaaattcnnnnnnnnntgagtaaaaa |
206 |
Q |
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| T |
34594270 |
agtctttggcttcaaccccagcatctacaaaacgcaatgaaaaatatcgtataaatcacagcaaaatgacgaaacaaattcaacaaaaaatgagtaaaaa |
34594369 |
T |
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| Q |
207 |
tataaagaaaactcgcctatgccggaaaatccaacacggcgtttcttcttggtttcatcgttgggatctgatttcaaagcgtgcttctgcttctgaccca |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34594370 |
tataaagaaaactcgcctatgccggaaaatccaacacggcgtttcttcttggtttcatcgttgggatctgatttcaaagcgtgcttctgcttctgaccca |
34594469 |
T |
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| Q |
307 |
tttctttcggttctgtgttttc |
328 |
Q |
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|||||||||||||||||||||| |
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| T |
34594470 |
tttctttcggttctgtgttttc |
34594491 |
T |
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