View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2024-Insertion-21 (Length: 97)

Name: NF2024-Insertion-21
Description: NF2024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2024-Insertion-21
NF2024-Insertion-21
[»] chr3 (27 HSPs)
chr3 (7-97)||(6236854-6236944)
chr3 (9-97)||(14494822-14494910)
chr3 (9-97)||(14976306-14976394)
chr3 (9-97)||(11398886-11398974)
chr3 (17-91)||(42244560-42244634)
chr3 (9-97)||(14660789-14660877)
chr3 (24-93)||(8685857-8685926)
chr3 (9-97)||(34053608-34053697)
chr3 (23-93)||(13069780-13069850)
chr3 (9-87)||(43842083-43842161)
chr3 (27-91)||(17023247-17023311)
chr3 (24-91)||(11869848-11869915)
chr3 (9-87)||(19656120-19656197)
chr3 (9-97)||(2721927-2722016)
chr3 (9-97)||(17041728-17041817)
chr3 (10-97)||(17050739-17050827)
chr3 (24-97)||(41545757-41545832)
chr3 (50-97)||(13605073-13605120)
chr3 (45-91)||(8531923-8531969)
chr3 (9-80)||(14348103-14348175)
chr3 (9-79)||(27407204-27407274)
chr3 (9-79)||(7908516-7908586)
chr3 (10-80)||(13418381-13418451)
chr3 (9-80)||(19567029-19567101)
chr3 (9-79)||(10850753-10850824)
chr3 (24-93)||(11577807-11577876)
chr3 (46-93)||(16703825-16703874)
[»] chr4 (21 HSPs)
chr4 (15-97)||(20059162-20059244)
chr4 (9-97)||(43701572-43701660)
chr4 (9-96)||(31593889-31593976)
chr4 (9-97)||(16951892-16951980)
chr4 (9-97)||(21275228-21275316)
chr4 (27-97)||(24125227-24125297)
chr4 (9-97)||(3355253-3355341)
chr4 (9-97)||(11902622-11902710)
chr4 (9-97)||(18286988-18287076)
chr4 (26-87)||(6518379-6518440)
chr4 (9-87)||(21102247-21102325)
chr4 (9-97)||(3772185-3772276)
chr4 (9-97)||(11888976-11889065)
chr4 (22-86)||(33331016-33331080)
chr4 (23-90)||(38652153-38652220)
chr4 (24-86)||(5675465-5675527)
chr4 (31-91)||(11922461-11922521)
chr4 (24-80)||(5513663-5513720)
chr4 (26-86)||(23793614-23793673)
chr4 (15-80)||(12808215-12808281)
chr4 (9-80)||(16953934-16954006)
[»] chr2 (27 HSPs)
chr2 (9-97)||(539192-539280)
chr2 (9-97)||(19929380-19929468)
chr2 (9-97)||(5499779-5499867)
chr2 (9-97)||(16134197-16134285)
chr2 (12-97)||(20282050-20282136)
chr2 (17-97)||(23340584-23340665)
chr2 (9-97)||(25481374-25481466)
chr2 (9-97)||(25488980-25489072)
chr2 (9-87)||(24825000-24825078)
chr2 (9-87)||(42767388-42767466)
chr2 (26-87)||(24820615-24820676)
chr2 (26-97)||(15583821-15583893)
chr2 (25-91)||(20852132-20852199)
chr2 (26-91)||(19124344-19124409)
chr2 (9-80)||(36684277-36684349)
chr2 (9-80)||(23698830-23698901)
chr2 (9-79)||(30949290-30949361)
chr2 (9-80)||(41653631-41653702)
chr2 (26-76)||(24371466-24371516)
chr2 (50-91)||(19013044-19013085)
chr2 (24-80)||(24321805-24321862)
chr2 (9-80)||(24177702-24177774)
chr2 (9-80)||(27745044-27745116)
chr2 (19-51)||(29568639-29568671)
chr2 (9-64)||(21344523-21344578)
chr2 (10-80)||(23614117-23614188)
chr2 (9-40)||(32441406-32441437)
[»] chr8 (17 HSPs)
chr8 (9-97)||(6279722-6279810)
chr8 (26-97)||(18162012-18162083)
chr8 (10-94)||(26012976-26013060)
chr8 (16-90)||(14162161-14162235)
chr8 (9-97)||(23193962-23194051)
chr8 (26-97)||(14351642-14351714)
chr8 (26-96)||(25396947-25397018)
chr8 (24-91)||(22904607-22904674)
chr8 (13-97)||(23221512-23221597)
chr8 (9-87)||(17515825-17515903)
chr8 (9-97)||(23503141-23503231)
chr8 (24-80)||(24342067-24342123)
chr8 (24-91)||(19792242-19792309)
chr8 (9-97)||(14878294-14878384)
chr8 (24-91)||(24221563-24221630)
chr8 (9-79)||(21139660-21139730)
chr8 (9-80)||(22284959-22285031)
[»] chr7 (33 HSPs)
chr7 (9-97)||(9004620-9004708)
chr7 (9-97)||(3376503-3376591)
chr7 (9-97)||(14941735-14941823)
chr7 (9-97)||(15369328-15369416)
chr7 (9-97)||(33612275-33612363)
chr7 (26-97)||(15707246-15707317)
chr7 (10-91)||(33609711-33609792)
chr7 (9-97)||(648792-648880)
chr7 (9-97)||(35964227-35964315)
chr7 (29-97)||(16097421-16097489)
chr7 (26-97)||(48340598-48340670)
chr7 (9-96)||(48355592-48355679)
chr7 (9-87)||(782792-782870)
chr7 (7-97)||(8787287-8787377)
chr7 (9-87)||(16076844-16076922)
chr7 (24-93)||(4460773-4460842)
chr7 (26-87)||(12561949-12562010)
chr7 (9-91)||(17206408-17206490)
chr7 (9-97)||(41722698-41722787)
chr7 (24-91)||(4983163-4983230)
chr7 (27-97)||(9264389-9264460)
chr7 (7-85)||(8780426-8780504)
chr7 (26-97)||(17946737-17946809)
chr7 (9-87)||(5840660-5840738)
chr7 (9-87)||(12567627-12567705)
chr7 (45-97)||(13731834-13731886)
chr7 (24-85)||(4465807-4465868)
chr7 (43-85)||(4541187-4541229)
chr7 (26-80)||(38877414-38877468)
chr7 (9-80)||(1613964-1614036)
chr7 (26-91)||(679512-679577)
chr7 (9-76)||(2325871-2325939)
chr7 (9-80)||(39271148-39271220)
[»] scaffold0371 (1 HSPs)
scaffold0371 (9-97)||(9096-9184)
[»] chr6 (35 HSPs)
chr6 (9-97)||(18195533-18195621)
chr6 (9-97)||(18233817-18233906)
chr6 (29-97)||(18184397-18184465)
chr6 (9-96)||(25949320-25949408)
chr6 (9-87)||(18844458-18844536)
chr6 (9-87)||(24218712-24218790)
chr6 (26-87)||(25402477-25402538)
chr6 (9-97)||(25963920-25964009)
chr6 (9-97)||(25968567-25968656)
chr6 (9-87)||(210156-210234)
chr6 (9-87)||(18448767-18448845)
chr6 (26-87)||(18854633-18854694)
chr6 (26-97)||(17743527-17743599)
chr6 (26-91)||(20222915-20222980)
chr6 (26-91)||(22116899-22116964)
chr6 (24-91)||(12660479-12660546)
chr6 (42-91)||(12658051-12658100)
chr6 (26-91)||(20221190-20221255)
chr6 (26-91)||(22115174-22115239)
chr6 (26-79)||(23348176-23348229)
chr6 (26-90)||(30245243-30245308)
chr6 (24-80)||(3923656-3923712)
chr6 (9-76)||(4740977-4741045)
chr6 (26-86)||(16207749-16207809)
chr6 (26-86)||(20464386-20464446)
chr6 (26-77)||(31965575-31965626)
chr6 (24-80)||(25031238-25031295)
chr6 (9-80)||(24545634-24545705)
chr6 (9-80)||(26821858-26821929)
chr6 (27-64)||(26017930-26017966)
chr6 (27-64)||(26138684-26138720)
chr6 (27-64)||(26157303-26157339)
chr6 (69-97)||(29093587-29093615)
chr6 (9-80)||(25339269-25339340)
chr6 (29-64)||(25507616-25507651)
[»] chr1 (21 HSPs)
chr1 (9-97)||(17716747-17716835)
chr1 (26-97)||(41802283-41802354)
chr1 (17-90)||(13799464-13799537)
chr1 (26-97)||(26134531-26134601)
chr1 (26-87)||(21792365-21792426)
chr1 (26-97)||(44538253-44538324)
chr1 (9-87)||(21784239-21784317)
chr1 (9-97)||(28207887-28207975)
chr1 (9-87)||(2386217-2386295)
chr1 (28-97)||(17986584-17986654)
chr1 (9-87)||(28206378-28206456)
chr1 (9-97)||(20412260-20412349)
chr1 (9-97)||(48256307-48256395)
chr1 (27-97)||(8648876-8648947)
chr1 (27-97)||(39286625-39286696)
chr1 (24-86)||(16384968-16385030)
chr1 (26-91)||(25405094-25405159)
chr1 (33-87)||(30819068-30819122)
chr1 (26-72)||(20899426-20899472)
chr1 (9-80)||(19880128-19880200)
chr1 (24-93)||(20860757-20860827)
[»] scaffold0064 (1 HSPs)
scaffold0064 (26-97)||(48803-48874)
[»] chr5 (16 HSPs)
chr5 (9-97)||(23343549-23343637)
chr5 (25-97)||(24165262-24165334)
chr5 (9-91)||(15059370-15059452)
chr5 (9-97)||(20967744-20967832)
chr5 (9-96)||(20169466-20169553)
chr5 (10-93)||(22942354-22942437)
chr5 (28-87)||(24214757-24214816)
chr5 (28-87)||(24220380-24220439)
chr5 (9-97)||(20915955-20916044)
chr5 (26-90)||(24166270-24166334)
chr5 (40-87)||(31057735-31057782)
chr5 (24-80)||(16677090-16677146)
chr5 (26-80)||(22170797-22170851)
chr5 (26-91)||(23029591-23029656)
chr5 (9-97)||(17408729-17408818)
chr5 (9-76)||(34223150-34223218)
[»] scaffold0447 (2 HSPs)
scaffold0447 (9-96)||(6414-6501)
scaffold0447 (9-96)||(11028-11115)
[»] scaffold0383 (1 HSPs)
scaffold0383 (9-96)||(9023-9110)
[»] scaffold0251 (1 HSPs)
scaffold0251 (26-97)||(18950-19021)
[»] scaffold0011 (2 HSPs)
scaffold0011 (26-97)||(163921-163992)
scaffold0011 (9-80)||(172731-172803)
[»] scaffold0471 (1 HSPs)
scaffold0471 (27-97)||(9815-9885)
[»] scaffold0138 (2 HSPs)
scaffold0138 (9-87)||(27365-27443)
scaffold0138 (9-87)||(39361-39439)
[»] scaffold0006 (1 HSPs)
scaffold0006 (31-97)||(33972-34038)
[»] scaffold0031 (4 HSPs)
scaffold0031 (24-93)||(100380-100449)
scaffold0031 (9-97)||(23260-23349)
scaffold0031 (26-97)||(199-271)
scaffold0031 (26-97)||(77851-77923)
[»] scaffold0211 (1 HSPs)
scaffold0211 (26-97)||(17651-17722)
[»] scaffold0142 (2 HSPs)
scaffold0142 (9-87)||(26862-26940)
scaffold0142 (26-87)||(21715-21776)
[»] scaffold1323 (1 HSPs)
scaffold1323 (9-87)||(1922-2000)
[»] scaffold1208 (1 HSPs)
scaffold1208 (9-87)||(1961-2039)
[»] scaffold0123 (1 HSPs)
scaffold0123 (9-87)||(2504-2582)
[»] scaffold0037 (1 HSPs)
scaffold0037 (9-87)||(48390-48468)
[»] scaffold0001 (1 HSPs)
scaffold0001 (9-87)||(425043-425121)
[»] scaffold0018 (1 HSPs)
scaffold0018 (26-87)||(18781-18842)
[»] scaffold0197 (1 HSPs)
scaffold0197 (33-93)||(8875-8935)
[»] scaffold0362 (1 HSPs)
scaffold0362 (31-97)||(9218-9285)
[»] scaffold0168 (1 HSPs)
scaffold0168 (27-97)||(8861-8932)
[»] scaffold0096 (1 HSPs)
scaffold0096 (9-87)||(37967-38045)
[»] scaffold0075 (1 HSPs)
scaffold0075 (9-87)||(19426-19504)
[»] scaffold0058 (1 HSPs)
scaffold0058 (9-87)||(61840-61918)
[»] scaffold1559 (1 HSPs)
scaffold1559 (24-91)||(1411-1478)
[»] scaffold0026 (1 HSPs)
scaffold0026 (9-87)||(13717-13795)
[»] scaffold0916 (1 HSPs)
scaffold0916 (26-97)||(3525-3597)
[»] scaffold0012 (1 HSPs)
scaffold0012 (27-97)||(49904-49975)
[»] scaffold0088 (1 HSPs)
scaffold0088 (26-80)||(38505-38559)
[»] scaffold0855 (1 HSPs)
scaffold0855 (26-93)||(3478-3544)
[»] scaffold0847 (1 HSPs)
scaffold0847 (26-93)||(3643-3709)
[»] scaffold0213 (1 HSPs)
scaffold0213 (23-93)||(21657-21728)
[»] scaffold0713 (1 HSPs)
scaffold0713 (27-64)||(6738-6774)


Alignment Details
Target: chr3 (Bit Score: 87; Significance: 3e-42; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 3e-42
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 6236854 - 6236944
Alignment:
Q  7 atctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6236854 atctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 6236944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 14494910 - 14494822
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14494910 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 14494822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 14976394 - 14976306
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14976394 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 14976306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 11398886 - 11398974
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    |||||||||||||||| ||||||||||||||  ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||    
T  11398886 ctagctatcacaacaattcatcttttgttcttggaaataataagggacaaatgtttctttgaataaaagttcacctttattttatgttc 11398974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 6e-28
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 42244634 - 42244560
Alignment:
Q  17 cacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||    
T  42244634 cacaacaaatcatcttttgttctctgaaataataagtgacaattgtttatttgaataaaagttcatctttatttt 42244560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 14660877 - 14660789
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||    
T  14660877 ctagccatcacaaagattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaattttacctttattttatgttc 14660789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 6e-25
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 8685926 - 8685857
Alignment:
Q  24 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttat 93  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8685926 aatcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcacctttattttat 8685857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 6e-25
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 34053697 - 34053608
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    |||||||||||||||| ||||||| ||||||  ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  34053697 ctagctatcacaacaattcatcttctgttcttggaaataataagtgacaattgtttctttgaatcaaagttcaacctttattttatgttc 34053608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 13069780 - 13069850
Alignment:
Q  23 aaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttat 93  Q
    |||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  13069780 aaatcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcatctttattttat 13069850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 9e-21
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 43842161 - 43842083
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | |||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  43842161 ctagccatcacaaatattcattttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcaccttta 43842083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 17023247 - 17023311
Alignment:
Q  27 catcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    |||||||||||||  ||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  17023247 catcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcatctttatttt 17023311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 11869915 - 11869848
Alignment:
Q  24 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    ||||||||||||||||  ||||||||||||||||||||||||| | |||||||||||| |||||||||    
T  11869915 aatcatcttttgttcttggaaataataagtgacaattgtttcttttaataaaagttcatctttatttt 11869848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 19656197 - 19656120
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | ||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  19656197 ctagccatcacaaatattcatcttttgttctcggaaataataagtgacaattg-ttctttgaataaaagttcaccttta 19656120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 2721927 - 2722016
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||| ||||  ||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||    
T  2721927 ctagccatcacaaatattcatcttttattcttggaaataataagtgacaattgtttctttgaataaaagttcaacctttattttctgttc 2722016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 17041728 - 17041817
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    ||||||||||| |||| ||||||||||||||  |||||||||||||||||||||||   | |||||||| || |||||||||||||||||    
T  17041728 ctagctatcactacaattcatcttttgttcttcgaaataataagtgacaattgttttctttaataaaagatcaacctttattttatgttc 17041817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 17050739 - 17050827
Alignment:
Q  10 tagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||| |||||||||   | |||||||| || |||||||||||||||||    
T  17050739 tagctatcacaacaattcatcttttgttcttggaaataataagtggcaattgttttctttaataaaagatcaacctttattttatgttc 17050827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 41545832 - 41545757
Alignment:
Q  24 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacc--tttattttatgttc 97  Q
    ||||||||||||||||  ||||| ||||||||||| ||||||| ||||||||||||| ||  ||||||||||||||    
T  41545832 aatcatcttttgttcttggaaattataagtgacaaatgtttctttgaataaaagttctcctttttattttatgttc 41545757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 13605073 - 13605120
Alignment:
Q  50 aagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  13605073 aagtgacaattgtttctttgaataaaatttcacctttattttatgttc 13605120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 8531923 - 8531969
Alignment:
Q  45 ataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||    
T  8531923 ataataagtgacatttgtttctttgaataaaagttcatctttatttt 8531969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 14348175 - 14348103
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaat--aataagtgacaattgtttctctgaataaaagttc 80  Q
    ||||| |||||||||||||||||||| |||| ||||||  |||||||||||||||| | ||| |||||||||||    
T  14348175 ctagccatcacaacaaatcatcttttattct-tgaaattcaataagtgacaattgtctttcttaataaaagttc 14348103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 27407204 - 27407274
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagtt 79  Q
    |||||||||||||||| |||||||||||||   ||||| |||||||||||||||| | ||| ||||||||||    
T  27407204 ctagctatcacaacaattcatcttttgttcctagaaatcaataagtgacaattgtct-tcttaataaaagtt 27407274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 7908516 - 7908586
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagtt 79  Q
    |||||||||| ||||||||||||||||||||  ||| | |  |||||||||||| | ||| ||||||||||    
T  7908516 ctagctatcataacaaatcatcttttgttcttggaattcaatagtgacaattgtctttcttaataaaagtt 7908586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 13418381 - 13418451
Alignment:
Q  10 tagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 80  Q
    ||||||||||||||| ||||||||||||||  ||| | |  |||||||||||| | ||| |||||||||||    
T  13418381 tagctatcacaacaattcatcttttgttcttggaattcaatagtgacaattgtctttcttaataaaagttc 13418451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 19567101 - 19567029
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaat--aataagtgacaattgtttctctgaataaaagttc 80  Q
    |||||||||| ||||| ||||||||| |||| ||||||  |||||||||||||||| | ||| |||||||||||    
T  19567101 ctagctatcataacaattcatcttttattct-tgaaattcaataagtgacaattgtctttcttaataaaagttc 19567029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 10850824 - 10850753
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaat--aataagtgacaattgtttctctgaataaaagtt 79  Q
    ||||| ||||||||||||||||||||||||| ||||||  |||||| || |||||| | ||| ||||||||||    
T  10850824 ctagccatcacaacaaatcatcttttgttct-tgaaattcaataagagaaaattgtctttcttaataaaagtt 10850753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 11577876 - 11577807
Alignment:
Q  24 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttat 93  Q
    ||||||||||||||||  | |||  || ||||||||| ||||  |||||||||| |||||||||||||||    
T  11577876 aatcatcttttgttcttgggaattctaggtgacaattatttcattgaataaaagatcacctttattttat 11577807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 16703825 - 16703874
Alignment:
Q  46 taataagtgacaattgttt-ctctgaataaaagttca-cctttattttat 93  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||||||    
T  16703825 taataagtgacaattgtttcctttgaataaaagttcatcctttattttat 16703874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 2e-37; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 20059244 - 20059162
Alignment:
Q  15 atcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20059244 atcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 20059162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 3e-36
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 43701660 - 43701572
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43701660 ctagctatcacaacaattcatcttttgttatctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 43701572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 6e-31
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 31593889 - 31593976
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgtt 96  Q
    |||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  31593889 ctagctatcataacaattcatcttttgttctttgaaataataagtgacaattgtttctttgaataaaagttcacttttattttatgtt 31593976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 16951892 - 16951980
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  16951892 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataacagttcacctttattttatgttc 16951980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 21275228 - 21275316
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  21275228 ctagccatcacaaatattcatcttttgttctctgaaataataagggacaattgtttctttgaataaaagttcacctttattttatgttc 21275316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 6e-28
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 24125297 - 24125227
Alignment:
Q  27 catcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  24125297 catcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcatctttattttatgttc 24125227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 3355253 - 3355341
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | |||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3355253 ctagccatcacaaatattcatcttttgttctataaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 3355341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 11902710 - 11902622
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    |||||||||| ||||| ||||||||||||||  ||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||    
T  11902710 ctagctatcataacaattcatcttttgttcttggaaataataagtgacaattgtttctttaaataaaagttcacatttattttatgttc 11902622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 18286988 - 18287076
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  18286988 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattctttctttgaataaaagttcacttttattttatgttc 18287076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 6e-25
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 6518379 - 6518440
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6518379 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 6518440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 9e-21
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 21102325 - 21102247
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | |||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||    
T  21102325 ctagccatcacaaatattcatcttttgttctcttaaataataagtgacaattatttctttgaataaaagttcaccttta 21102247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 3772276 - 3772185
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctct--gaaataataagtgacaattgtttctctgaataaaagttca-cctttattttatgttc 97  Q
    ||||| |||||||||||| |||||||||  |||  |||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||    
T  3772276 ctagcaatcacaacaaataatcttttgtgttcttggaaataataagtgacaattgcttctttgaataaaagttcaccctttattttatgttc 3772185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 11889065 - 11888976
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||| |  ||||||||||||||    
T  11889065 ctagccatcacaaatattcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcaatatttattttatgttc 11888976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 33331080 - 33331016
Alignment:
Q  22 caaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttt 86  Q
    |||||||||| |||||||||||||| ||||||||||||| ||||| ||||||||||||| |||||    
T  33331080 caaatcatctattgttctctgaaattataagtgacaattatttctttgaataaaagttctccttt 33331016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 38652153 - 38652220
Alignment:
Q  23 aaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattt 90  Q
    ||||||||||||||| |  ||||||||||||||||||||||||| |||||||||||||| | ||||||    
T  38652153 aaatcatcttttgttattggaaataataagtgacaattgtttctttgaataaaagttcatccttattt 38652220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 5675465 - 5675527
Alignment:
Q  24 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttt 86  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||| |||| |||||    
T  5675465 aatcatcttttgttctctgaaattataagtgacaactgtttctttgaataaatgttctccttt 5675527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 11922521 - 11922461
Alignment:
Q  31 ttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    |||||||||  ||||||||||||||||||||||||| | |||||||||||  |||||||||    
T  11922521 ttttgttcttggaaataataagtgacaattgtttcttttaataaaagttcttctttatttt 11922461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 5513720 - 5513663
Alignment:
Q  24 aatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 80  Q
    ||||||||||||||||   |||| |||||||||||||||||||| |||||||||||||    
T  5513720 aatcatcttttgttcttgtaaattaataagtgacaattgtttctttgaataaaagttc 5513663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 23793673 - 23793614
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttt 86  Q
    ||||||||||||||  ||||| ||||||| ||||||||||| |||||||||||||| ||||    
T  23793673 tcatcttttgttcttggaaattataagtg-caattgtttctttgaataaaagttcatcttt 23793614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 12808281 - 12808215
Alignment:
Q  15 atcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 80  Q
    |||||||||||||||||||||||||  ||| | ||||||||| |||||| | ||| |||||||||||    
T  12808281 atcacaacaaatcatcttttgttcttggaattcaataagtgagaattgtctttctcaataaaagttc 12808215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 16954006 - 16953934
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 80  Q
    |||||||||| ||||| |||||||||||| |  ||| | |||||||||||||||| | ||| |||||||||||    
T  16954006 ctagctatcataacaattcatcttttgttattggaattcaataagtgacaattgtctttcttaataaaagttc 16953934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 3e-36; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 3e-36
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 539192 - 539280
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  539192 ctagccatcacaacaaatcatcttttgttttctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 539280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 19929380 - 19929468
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19929380 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 19929468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 5499867 - 5499779
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5499867 ctagccatcacaaatattcatcttttgttctctaaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 5499779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 16134285 - 16134197
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16134285 ctagccatcacaaatattcatcttttgttctttgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 16134197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 6e-28
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 20282050 - 20282136
Alignment:
Q  12 gctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  20282050 gctatcacaacaattcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatgttc 20282136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 2e-27
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 23340584 - 23340665
Alignment:
Q  17 cacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  23340584 cacaacaaatcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatgttc 23340665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 9e-24
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 25481374 - 25481466
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaat----aataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | |||||||||||||||||||||    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25481374 ctagccatcacaaatattcatcttttgttctctgaaataaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 25481466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 9e-24
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 25488980 - 25489072
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaat----aataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | |||||||||||||||||||||    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25488980 ctagccatcacaaatattcatcttttgttctctgaaataaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 25489072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 24825078 - 24825000
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  24825078 ctagccatcacaaatattcatcttttgttctctgaaataataagggacaattgtttctttgaataaaagttcaccttta 24825000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 42767466 - 42767388
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42767466 ctagccatcacaaatattcatcttttgttatctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 42767388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 24820676 - 24820615
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    |||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  24820676 tcatcttttgttctttgaaataataagggacaattgtttctttgaataaaagttcaccttta 24820615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 15583821 - 15583893
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttca-cctttattttatgttc 97  Q
    ||||||||||||||  ||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||    
T  15583821 tcatcttttgttcttggaaataataagtgacaactgtttctttgaataaaagttcaccctttattttatgttc 15583893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 20852132 - 20852199
Alignment:
Q  25 atcatcttttgttctctgaaataataagtgacaattgtttctctgaat-aaaagttcacctttatttt 91  Q
    |||||||||||||||  ||||||||||||||||||||||||| ||||| ||||||||| |||||||||    
T  20852132 atcatcttttgttcttcgaaataataagtgacaattgtttctttgaataaaaagttcatctttatttt 20852199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 19124409 - 19124344
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    |||||||||||||    |||||||||||||||||||||||| |||||||||||||| |||||||||    
T  19124409 tcatcttttgttcatgaaaataataagtgacaattgtttctttgaataaaagttcatctttatttt 19124344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 36684277 - 36684349
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 80  Q
    ||||| |||||||||||||||||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  36684277 ctagccatcacaacaaatcatcttttcttcttggaattcaataagtgacaattgtctttcttaataaaagttc 36684349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 23698901 - 23698830
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 80  Q
    |||||||||||||||| ||||||||||||||  ||| | |  |||||||||||| | ||| |||||||||||    
T  23698901 ctagctatcacaacaattcatcttttgttcttggaattcaatagtgacaattgtctttcttaataaaagttc 23698830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 30949361 - 30949290
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagtt 79  Q
    |||||||||| ||||| ||||||||||||||  ||| | |||||||||||||||| | ||| ||||||||||    
T  30949361 ctagctatcataacaattcatcttttgttcttcgaattcaataagtgacaattgtctttctaaataaaagtt 30949290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 41653702 - 41653631
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 80  Q
    |||||||||||||||| ||||||||||||||  ||| | |  |||||||||||| | ||| |||||||||||    
T  41653702 ctagctatcacaacaattcatcttttgttcttggaattcaatagtgacaattgtctttcttaataaaagttc 41653631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 24371516 - 24371466
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaa 76  Q
    ||||||||||||||  ||| | ||||||||||||||||||| |||||||||    
T  24371516 tcatcttttgttcttggaatttataagtgacaattgtttctttgaataaaa 24371466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 19013085 - 19013044
Alignment:
Q  50 aagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    ||||||||||||||||| |||||||||||||| | |||||||    
T  19013085 aagtgacaattgtttctttgaataaaagttcatcattatttt 19013044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 24321805 - 24321862
Alignment:
Q  24 aatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 80  Q
    ||||||||||||||||  ||||| |||||||||||||||||| | ||| |||||||||    
T  24321805 aatcatcttttgttcttggaaattaataagtgacaattgtttatttgagtaaaagttc 24321862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 24177774 - 24177702
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 80  Q
    |||||||||| ||||  ||||||||||||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  24177774 ctagctatcataacatttcatcttttgttcttggaattcaataagtgacaattgtctttcttaataaaagttc 24177702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 27745044 - 27745116
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 80  Q
    |||||||||| ||||| ||||||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  27745044 ctagctatcataacaattcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 27745116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 29568671 - 29568639
Alignment:
Q  19 caacaaatcatcttttgttctctgaaataataa 51  Q
    |||||| ||||||||||||||||||||||||||    
T  29568671 caacaattcatcttttgttctctgaaataataa 29568639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 21344578 - 21344523
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgttt 64  Q
    |||||||||||||||| |||||||||||| |  ||| |||  ||||||||||||||    
T  21344578 ctagctatcacaacaattcatcttttgttattggaattaaatagtgacaattgttt 21344523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 23614188 - 23614117
Alignment:
Q  10 tagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 80  Q
    ||||||||||||||| ||||||| ||||||  ||||| ||||||||| || ||| | ||| |||||||||||    
T  23614188 tagctatcacaacaattcatcttctgttcttggaaatcaataagtgaaaactgtctttcttaataaaagttc 23614117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 40
Target Start/End: Complemental strand, 32441437 - 32441406
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctc 40  Q
    |||||||||||||||| |||||||||||||||    
T  32441437 ctagctatcacaacaattcatcttttgttctc 32441406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 6e-34; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 6e-34
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 6279722 - 6279810
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  6279722 ctagctatcacaacaattcatcttttgctctctgaaataataagtgacaattgtttctttgaataaaagttctcctttattttatgttc 6279810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 6e-31
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 18162012 - 18162083
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18162012 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 18162083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 26012976 - 26013060
Alignment:
Q  10 tagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatg 94  Q
    ||||||||| ||||| ||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26012976 tagctatcataacaattcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcacctttattttatg 26013060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 6e-28
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 14162235 - 14162161
Alignment:
Q  16 tcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattt 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||    
T  14162235 tcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttatttgaataaaagttcatctttattt 14162161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 1e-22
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 23194051 - 23193962
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttca-cctttattttatgttc 97  Q
    |||| ||||| ||||| ||||||||||||||  |||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||    
T  23194051 ctagttatcataacaattcatcttttgttcttggaaataataactgacaattgtttctttgaataaaagttcaccctttattttatgttc 23193962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 14351714 - 14351642
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||    
T  14351714 tcatcttttgttctatgaaataataagtgacaattgttcctttgaataaaagttcaacctttattttatgttc 14351642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 25396947 - 25397018
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgtt 96  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  25396947 tcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatgtt 25397018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 22904607 - 22904674
Alignment:
Q  24 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    ||||||||||||||||  ||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  22904607 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 22904674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 23221597 - 23221512
Alignment:
Q  13 ctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttca-cctttattttatgttc 97  Q
    |||||| ||||| ||||||||| ||||   |||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  23221597 ctatcataacaattcatcttttcttcttgaaaataataagtgacaattgtttctttgaataaaagttcaccctttgttttatgttc 23221512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 17515903 - 17515825
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | |||| ||||||| |  ||||||||||||||||||||||||| ||||||||||||||||||||    
T  17515903 ctagccatcacaaatattcatattttgttataagaaataataagtgacaattgtttctttgaataaaagttcaccttta 17515825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 23503141 - 23503231
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataa-taagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    ||||| |||||||||||||||||||||||||  |||||||  ||| ||||||||||| | ||||||||||| | |||||||||||||||||    
T  23503141 ctagccatcacaacaaatcatcttttgttcttggaaataacaaagggacaattgtttgtttgaataaaagtccaacctttattttatgttc 23503231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 24342067 - 24342123
Alignment:
Q  24 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 80  Q
    ||||||||||||||||  ||||||||||||||||||||||||| | |||||||||||    
T  24342067 aatcatcttttgttcttagaaataataagtgacaattgtttcttttaataaaagttc 24342123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 19792309 - 19792242
Alignment:
Q  24 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    |||||||||| |||||  ||||||||||||||||||||||||| | ||||||| |||| |||||||||    
T  19792309 aatcatctttagttcttggaaataataagtgacaattgtttctttaaataaaaattcatctttatttt 19792242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 14878384 - 14878294
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaat-aaaagttc-acctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||| ||||   |||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||    
T  14878384 ctagccatcacaaatattcatcttttcttcttgaaaataataagtgacaattgtttctttgaataaaaagttcaacctttattttatgttc 14878294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 24221630 - 24221563
Alignment:
Q  24 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    |||||| |||||||||  |||||  |||||||||||| ||||| ||||||||||||||  ||||||||    
T  24221630 aatcattttttgttcttggaaattctaagtgacaattatttctttgaataaaagttcatatttatttt 24221563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 21139660 - 21139730
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagtt 79  Q
    |||||||||||||||| ||||||||||||||  ||| | |  |||||||||||| | ||| ||||||||||    
T  21139660 ctagctatcacaacaattcatcttttgttcttggaattcaatagtgacaattgtctttcttaataaaagtt 21139730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 22284959 - 22285031
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 80  Q
    |||||||||| ||||| ||||||||| ||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  22284959 ctagctatcataacaattcatcttttattcttggaattcaataagtgacaattgtctttcttaataaaagttc 22285031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 6e-34; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 6e-34
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 9004620 - 9004708
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  9004620 ctagctatcataacaattcatcttttgttctctgaaataataagtgacaattggttctttgaataaaagttcacctttattttatgttc 9004708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 3376591 - 3376503
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||||||||||||||||||||  ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3376591 ctagccatcacaacaaatcatcttttgttcttggaagtaataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 3376503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 14941823 - 14941735
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14941823 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 14941735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 15369416 - 15369328
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15369416 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 15369328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 33612363 - 33612275
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33612363 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 33612275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 6e-31
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 15707317 - 15707246
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15707317 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 15707246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 33609711 - 33609792
Alignment:
Q  10 tagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  33609711 tagctatcataacaattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcatctttatttt 33609792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 648880 - 648792
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  648880 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttaacctttattttatgttc 648792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 35964315 - 35964227
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  35964315 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcccctttattttatgttc 35964227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 16097489 - 16097421
Alignment:
Q  29 tcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16097489 tcttttgttctctgaaataagaagtgacaattgtttctttgaataaaagttcacctttattttatgttc 16097421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 48340670 - 48340598
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  48340670 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatgttc 48340598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 4e-26
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 48355679 - 48355592
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgtt 96  Q
    ||||| |||||||  | |||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  48355679 ctagccatcacaaatattcatcttttgttctttgaaataataagtgacaattgtttatttgaataaaagttcacctttattttatgtt 48355592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 1e-25
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 782870 - 782792
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  782870 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 782792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 1e-25
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 8787377 - 8787287
Alignment:
Q  7 atctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||| ||||| ||||||||||||||   |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  8787377 atctatctatcaaaacaattcatcttttgttcttgaaaataataagtgacaattgtttctttgaataaaatttcacctttattttatgttc 8787287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 1e-25
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 16076922 - 16076844
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16076922 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 16076844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 6e-25
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 4460842 - 4460773
Alignment:
Q  24 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttat 93  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4460842 aatcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcacctttattttat 4460773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 6e-25
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 12561949 - 12562010
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12561949 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 12562010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 17206490 - 17206408
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    ||||| |||||||||| ||||||||||||||  ||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  17206490 ctagcaatcacaacaattcatcttttgttcttggaaataataagtgacaattgtctctttgaataaaagttcatctttatttt 17206408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 1e-22
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 41722698 - 41722787
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  41722698 ctagccatcacaaatattcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatgttc 41722787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 4983230 - 4983163
Alignment:
Q  24 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    ||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  4983230 aatcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcatctttatttt 4983163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 9264460 - 9264389
Alignment:
Q  27 catcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  9264460 catcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatgttc 9264389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 9e-21
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 8780504 - 8780426
Alignment:
Q  7 atctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctt 85  Q
    ||||||||||||||| || ||||||||||||||  |||||||||||| | |||||||||| ||||||||||||||||||    
T  8780504 atctagctatcacaataattcatcttttgttcttggaaataataagttataattgtttctttgaataaaagttcacctt 8780426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 17946737 - 17946809
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    ||||||||||||||  ||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||    
T  17946737 tcatcttttgttcttggaaataataagtgtcaattgtttctttgaataaaagttcaacctttattttatgttc 17946809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 5840660 - 5840738
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | |||| |||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  5840660 ctagccatcacaaatattcatattttgttctcggaaataataagtgacaactgtttctttgaataaaagttcaccttta 5840738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 12567627 - 12567705
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | |||||||||||||| | |||||||| ||||||||||||||| ||||||||||||||||||||    
T  12567627 ctagccatcacaaatattcatcttttgttcttttaaataatatgtgacaattgtttctttgaataaaagttcaccttta 12567705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 13731834 - 13731886
Alignment:
Q  45 ataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  13731834 ataataagtgacaattgtttctttgaataaaagttcaccgttattttatgttc 13731886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 4465868 - 4465807
Alignment:
Q  24 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctt 85  Q
    ||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||| ||||    
T  4465868 aatcatcttttgttctctgaaattaatagtgacaattgtttctttgaataaaagttctcctt 4465807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 4541187 - 4541229
Alignment:
Q  43 aaataataagtgacaattgtttctctgaataaaagttcacctt 85  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  4541187 aaataataagtgacaattgtttctttgaataaaagttcacctt 4541229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 38877414 - 38877468
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 80  Q
    ||||||||||||||  ||||| ||||||||||||||||||| |||||||||||||    
T  38877414 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc 38877468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 1613964 - 1614036
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 80  Q
    |||||||||| ||||||||||||||||||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  1613964 ctagctatcataacaaatcatcttttgttcttggaattcaataagtgacaattgtctttcttaataaaagttc 1614036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 679577 - 679512
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    ||||||||||||||   ||||  |||||||||||| ||||| |||||||||||||  |||||||||    
T  679577 tcatcttttgttcttgaaaattctaagtgacaattatttctttgaataaaagttcttctttatttt 679512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 2325939 - 2325871
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaa 76  Q
    ||||| ||||||| |||||||||||||||||  ||| | |||||||||||||||| | ||| |||||||    
T  2325939 ctagccatcacaataaatcatcttttgttcttggaattcaataagtgacaattgtctttcttaataaaa 2325871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 39271148 - 39271220
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 80  Q
    |||||||||| ||||| | ||||||||||||  ||| | |||||||||||||||| | ||| |||||||||||    
T  39271148 ctagctatcataacaattgatcttttgttcttggaattcaataagtgacaattgtctttcttaataaaagttc 39271220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 69; Significance: 2e-31; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 9184 - 9096
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9184 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 9096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 2e-31; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 18195621 - 18195533
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18195621 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 18195533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 18233906 - 18233817
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  18233906 ctagctatcacaacaattcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatgttc 18233817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 18184465 - 18184397
Alignment:
Q  29 tcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18184465 tcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 18184397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 25949320 - 25949408
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgtt 96  Q
    |||||||||| ||||| ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  25949320 ctagctatcataacaattcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatgtt 25949408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-25
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 18844458 - 18844536
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18844458 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 18844536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 1e-25
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 24218712 - 24218790
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24218712 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 24218790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 6e-25
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 25402538 - 25402477
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25402538 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 25402477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 6e-25
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 25963920 - 25964009
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    |||||||||| ||||| ||||||||||||||  ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  25963920 ctagctatcataacaattcatcttttgttcttggaaataataagtgacaattgtttctttgaattaaagttcaacctttattttatgttc 25964009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 6e-25
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 25968567 - 25968656
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    |||||||||| ||||| ||||||||||||||  ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  25968567 ctagctatcataacaattcatcttttgttcttggaaataataagtgacaattgtttctttgaattaaagttcaacctttattttatgttc 25968656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 210234 - 210156
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  210234 ctagccatcacaaatattcatcttttgttctctgaaataatgagtgacaattgtttctttgaataaaagttcaccttta 210156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 18448767 - 18448845
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  18448767 ctagccatcacaaatattcatcttttgttctctgtaataataagtgacaattgtttctttgaataaaagttcaccttta 18448845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 1e-22
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 18854633 - 18854694
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  18854633 tcatcttttgttctctgaaatattaagtgacaattgtttctttgaataaaagttcaccttta 18854694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 17743527 - 17743599
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  17743527 tcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatgttc 17743599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 20222915 - 20222980
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    ||||||||||||||  ||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  20222915 tcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcatctttatttt 20222980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 22116899 - 22116964
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    ||||||||||||||  ||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  22116899 tcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcatctttatttt 22116964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 12660546 - 12660479
Alignment:
Q  24 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    ||||||||||| ||||   |||||||||||||||||||||||| |||||||||||||| |||||||||    
T  12660546 aatcatctttttttcttgaaaataataagtgacaattgtttctttgaataaaagttcatctttatttt 12660479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 12658100 - 12658051
Alignment:
Q  42 gaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    ||||||||||| ||||||||||||| |||||||||||||| |||||||||    
T  12658100 gaaataataagcgacaattgtttctttgaataaaagttcatctttatttt 12658051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 20221190 - 20221255
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    ||||||||||||||  ||||||||||||||||||||||| | |||||||  ||||| |||||||||    
T  20221190 tcatcttttgttcttggaaataataagtgacaattgtttttttgaataagtgttcatctttatttt 20221255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 22115174 - 22115239
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    ||||||||||||||  ||||||||||||||||||||||| | |||||||  ||||| |||||||||    
T  22115174 tcatcttttgttcttggaaataataagtgacaattgtttttttgaataagtgttcatctttatttt 22115239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 23348229 - 23348176
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagtt 79  Q
    ||||||||||||||||||||| |  |||||||||||||||| ||||||||||||    
T  23348229 tcatcttttgttctctgaaattaatagtgacaattgtttctttgaataaaagtt 23348176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 30245243 - 30245308
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattt 90  Q
    |||| |||||||||  ||||||||||||||||||||||| | ||||||||||||| ||||||||||    
T  30245243 tcatattttgttcttggaaataataagtgacaattgtttatttgaataaaagttcaacctttattt 30245308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 3923656 - 3923712
Alignment:
Q  24 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 80  Q
    ||||||||||||||||||||||| |  ||||||||||||| || |||||||||||||    
T  3923656 aatcatcttttgttctctgaaattaatagtgacaattgttactttgaataaaagttc 3923712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 4740977 - 4741045
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtt-tctctgaataaaa 76  Q
    |||||||||| ||||| ||||||||||||||||||||| |  ||||||||||||| ||| |||||||||    
T  4740977 ctagctatcataacaattcatcttttgttctctgaaattaatagtgacaattgttctctttgaataaaa 4741045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 16207809 - 16207749
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttt 86  Q
    |||||||||||| || ||||| ||||||||||||||||||| ||||||||| ||| |||||    
T  16207809 tcatcttttgttttcagaaattataagtgacaattgtttctttgaataaaatttctccttt 16207749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 20464386 - 20464446
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttt 86  Q
    ||||||||||||||   |||| ||||||||||||||||||| ||||||||||||| |||||    
T  20464386 tcatcttttgttcttgaaaattataagtgacaattgtttctttgaataaaagttctccttt 20464446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 31965626 - 31965575
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaag 77  Q
    ||||||||||||||  ||||| ||||||||||||||||||| ||||||||||    
T  31965626 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaag 31965575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 25031295 - 25031238
Alignment:
Q  24 aatcatcttttgttctctgaaataataagtgacaattg-tttctctgaataaaagttc 80  Q
    ||||||||||||||||||||||| |  ||||||||||| ||||| |||||||||||||    
T  25031295 aatcatcttttgttctctgaaattaatagtgacaattgttttctttgaataaaagttc 25031238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 24545705 - 24545634
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 80  Q
    |||||||||||||||| ||||||||||||||  ||| | |  |||||||||||| | ||| |||||||||||    
T  24545705 ctagctatcacaacaattcatcttttgttcttggaattcaatagtgacaattgtctttcttaataaaagttc 24545634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 26821858 - 26821929
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 80  Q
    ||||| |||| || ||||||| |||||||||  ||| ||||||||||||||| ||||| | |||||||||||    
T  26821858 ctagcaatcataataaatcatattttgttcttggaattaataagtgacaattatttcttttaataaaagttc 26821929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 26017930 - 26017966
Alignment:
Q  27 catcttttgttctctgaaataataagtgacaattgttt 64  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  26017930 catcttttgttct-tgaaataataagtgacaattgttt 26017966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 26138684 - 26138720
Alignment:
Q  27 catcttttgttctctgaaataataagtgacaattgttt 64  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  26138684 catcttttgttct-tgaaataataagtgacaattgttt 26138720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 26157303 - 26157339
Alignment:
Q  27 catcttttgttctctgaaataataagtgacaattgttt 64  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  26157303 catcttttgttct-tgaaataataagtgacaattgttt 26157339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 97
Target Start/End: Original strand, 29093587 - 29093615
Alignment:
Q  69 gaataaaagttcacctttattttatgttc 97  Q
    |||||||||||||||||||||||||||||    
T  29093587 gaataaaagttcacctttattttatgttc 29093615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 25339340 - 25339269
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 80  Q
    ||||| |||||||||| ||||||||||||||  ||| | |  |||||||||||| | ||| |||||||||||    
T  25339340 ctagcaatcacaacaattcatcttttgttcttggaattcaatagtgacaattgtctttcttaataaaagttc 25339269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 25507616 - 25507651
Alignment:
Q  29 tcttttgttctctgaaataataagtgacaattgttt 64  Q
    |||||||||||  |||||||||||||||||||||||    
T  25507616 tcttttgttcttggaaataataagtgacaattgttt 25507651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 2e-31; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 17716747 - 17716835
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    |||||||||| ||||| | |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17716747 ctagctatcataacaatttatcttttgttctctaaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 17716835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 1e-28
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 41802283 - 41802354
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41802283 tcatcttttgttctatgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 41802354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 2e-27
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 13799537 - 13799464
Alignment:
Q  17 cacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattt 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||    
T  13799537 cacaacaaatcatcttttgttctctgaaataataagtgacaattgtttatttgaataaaagttcatctttattt 13799464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 4e-26
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 26134601 - 26134531
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  26134601 tcatcttttgttctctgaaataataagtgacaattgttt-tttgaataaaagttcacctttattttatgttc 26134531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 6e-25
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 21792426 - 21792365
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21792426 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 21792365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 9e-24
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 44538253 - 44538324
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    |||||||||||||||  ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44538253 tcatcttttgttctcaaaaatattaagtgacaattgtttctttgaataaaagttcacctttattttatgttc 44538324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 21784317 - 21784239
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  21784317 ctagccatcacaaatattcatcttttgttctctaaaataataagtgacaattgtttctttgaataaaagttcaccttta 21784239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 5e-22
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 28207887 - 28207975
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    |||||||||| ||||| |||||||||||| |   |||||||||||||| ||||||| | ||||||||||||||||||||||||||||||    
T  28207887 ctagctatcataacaattcatcttttgtttttgcaaataataagtgaccattgtttatttgaataaaagttcacctttattttatgttc 28207975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 9e-21
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 2386217 - 2386295
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | ||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||    
T  2386217 ctagccatcacaaatattcatcttttgttctcggaaataataagtgacaattgtttctttgaataaaagtttaccttta 2386295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 9e-21
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 17986584 - 17986654
Alignment:
Q  28 atcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  17986584 atcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatgttc 17986654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 9e-21
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 28206456 - 28206378
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | ||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||    
T  28206456 ctagccatcacaaatattcatcttttgttctcagaaataataagtgacaattgtttctttgaataaaaattcaccttta 28206378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 20412260 - 20412349
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||   | |||||||| || |||||||||||||||||    
T  20412260 ctagctatcacaacaattcatcttttgttcttggaaataataagtgacaattgttttctttaataaaagatcaacctttattttatgttc 20412349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 48256307 - 48256395
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    |||||||| | ||||| |||||||||||||| || |||||||||| |||||||||||| ||||||||||||| |||||||||||||||||    
T  48256307 ctagctattataacaattcatcttttgttct-tggaataataagtaacaattgtttctttgaataaaagttcaacctttattttatgttc 48256395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 8648876 - 8648947
Alignment:
Q  27 catcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    |||||||||||||   |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  8648876 catcttttgttcttgaaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatgttc 8648947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 39286696 - 39286625
Alignment:
Q  27 catcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    |||||||||||||  |||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  39286696 catcttttgttcttggaaaaaataagtgacaattgtttctttgaataaaagttcaacctttattttatgttc 39286625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 16385030 - 16384968
Alignment:
Q  24 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttt 86  Q
    |||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||    
T  16385030 aatcgtcttttgttctttgaaattataagtgacaattgtttctttgaataaaagttctccttt 16384968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 25405159 - 25405094
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    ||||||||||||||  ||||||||||||||||||||||||| | |||||||||||  |||||||||    
T  25405159 tcatcttttgttcttggaaataataagtgacaattgtttcttttaataaaagttcttctttatttt 25405094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 30819122 - 30819068
Alignment:
Q  33 ttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    |||||||  ||||||||||||||||||||||||| |||||||||||||| |||||    
T  30819122 ttgttcttggaaataataagtgacaattgtttctttgaataaaagttcatcttta 30819068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 20899472 - 20899426
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaat 72  Q
    ||||||||||||||  ||||||||||||||||||||||||| |||||    
T  20899472 tcatcttttgttcttggaaataataagtgacaattgtttctttgaat 20899426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 19880200 - 19880128
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaagttc 80  Q
    |||||||||||||||| ||||||||||||||  ||| | |||||||||||||| | | ||| |||||||||||    
T  19880200 ctagctatcacaacaattcatcttttgttcttggaattcaataagtgacaattctctttcttaataaaagttc 19880128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 20860827 - 20860757
Alignment:
Q  24 aatcatcttttgttctctgaaataataagtgacaattgtttc-tctgaataaaagttcacctttattttat 93  Q
    |||||||| |||||||  ||||| |  ||||||||||||||| | |||||||||||||| |||||||||||    
T  20860827 aatcatctcttgttcttggaaattaatagtgacaattgtttcctttgaataaaagttcatctttattttat 20860757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 68; Significance: 6e-31; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 68; E-Value: 6e-31
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 48803 - 48874
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  48803 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 48874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 4e-29; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 23343637 - 23343549
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  23343637 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacttttattttatgttc 23343549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 4e-29
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 24165262 - 24165334
Alignment:
Q  25 atcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24165262 atcatcttttgttctcttaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 24165334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 6e-28
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 15059370 - 15059452
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15059370 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 15059452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 9e-27
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 20967744 - 20967832
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||    
T  20967744 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattttttctttgaataaaagttcaactttattttatgttc 20967832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 4e-26
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 20169553 - 20169466
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgtt 96  Q
    |||||||||||||||| |||||||||||| |  |||| |||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  20169553 ctagctatcacaacaattcatcttttgttattggaaagaataagtgacaattgtttctttgaataaaagtccacctttattttatgtt 20169466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 4e-26
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 22942354 - 22942437
Alignment:
Q  10 tagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttat 93  Q
    ||||||||| ||||| ||||||||||||||  ||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  22942354 tagctatcataacaattcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaatttcacctttattttat 22942437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 24214757 - 24214816
Alignment:
Q  28 atcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  24214757 atcttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcaccttta 24214816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 24220380 - 24220439
Alignment:
Q  28 atcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  24220380 atcttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcaccttta 24220439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 8e-18
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 20916044 - 20915955
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||||||||  ||||||||||||||||||| ||||| ||||||||||||| || ||||||||||||||    
T  20916044 ctagccatcacaaatattcatcttttgttcttggaaataataagtgacaattatttctttgaataaaagttcaacatttattttatgttc 20915955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 24166270 - 24166334
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattt 90  Q
    ||||||||||||||  ||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  24166270 tcatcttttgttcttggaaatgataagtgacaattgtttctttgaataaaagttcatctttattt 24166334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 31057782 - 31057735
Alignment:
Q  40 ctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  31057782 ctgaaataataagtgacaattttttctttgaataaaagttcaccttta 31057735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 16677090 - 16677146
Alignment:
Q  24 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 80  Q
    ||||||||||| ||||||||||| |  |||||||||||||||| |||||||||||||    
T  16677090 aatcatcttttcttctctgaaattaatagtgacaattgtttctttgaataaaagttc 16677146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 22170797 - 22170851
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 80  Q
    |||||||||||| |||||||| |  |||||||||||||||| |||||||||||||    
T  22170797 tcatcttttgttatctgaaattaatagtgacaattgtttctttgaataaaagttc 22170851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 23029656 - 23029591
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    ||||||||||||||  ||||| ||||||||  ||||||||| |||||||||||||  |||||||||    
T  23029656 tcatcttttgttcttggaaattataagtgaagattgtttctttgaataaaagttcttctttatttt 23029591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 17408818 - 17408729
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    |||||||||| ||  | ||||||||||||||   |||||||||||| |||||||||   | |||||||| || |||||||||||||||||    
T  17408818 ctagctatcataaacattcatcttttgttcttcaaaataataagtgccaattgttttctttaataaaagatcaacctttattttatgttc 17408729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 34223218 - 34223150
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaat-aataagtgacaattgtttctctgaataaaa 76  Q
    |||||| ||||||||| ||||||||||||||  ||| | |||||||||||||||| | ||| |||||||    
T  34223218 ctagctgtcacaacaattcatcttttgttcttggaattcaataagtgacaattgtctttcttaataaaa 34223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 64; Significance: 1e-28; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 64; E-Value: 1e-28
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 6414 - 6501
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgtt 96  Q
    ||||| |||||||  | ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6414 ctagccatcacaaatattcatcttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgtt 6501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 64; E-Value: 1e-28
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 11028 - 11115
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgtt 96  Q
    ||||| |||||||  | ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11028 ctagccatcacaaatattcatcttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgtt 11115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 64; Significance: 1e-28; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 64; E-Value: 1e-28
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 9023 - 9110
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgtt 96  Q
    ||||| |||||||  | ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9023 ctagccatcacaaatattcatcttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgtt 9110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 64; Significance: 1e-28; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 64; E-Value: 1e-28
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 19021 - 18950
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19021 tcatctttagttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 18950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 64; Significance: 1e-28; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 64; E-Value: 1e-28
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 163992 - 163921
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  163992 tcatcttttgttctgtgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 163921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 172731 - 172803
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattg-tttctctgaataaaagttc 80  Q
    ||||| |||||||||| ||||||||||||||  ||| | |  ||||||||||| ||||||| |||||||||||    
T  172731 ctagcaatcacaacaattcatcttttgttcttggaattcaatagtgacaattgttttctcttaataaaagttc 172803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 63; Significance: 6e-28; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 63; E-Value: 6e-28
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 9885 - 9815
Alignment:
Q  27 catcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  9885 catcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcatctttattttatgttc 9815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 63; Significance: 6e-28; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 63; E-Value: 6e-28
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 27365 - 27443
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27365 ctagccatcacaaataatcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 27443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 63; E-Value: 6e-28
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 39361 - 39439
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39361 ctagccatcacaaataatcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 39439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 63; Significance: 6e-28; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 63; E-Value: 6e-28
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 33972 - 34038
Alignment:
Q  31 ttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33972 ttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 34038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 62; Significance: 2e-27; HSPs: 4)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 62; E-Value: 2e-27
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 100380 - 100449
Alignment:
Q  24 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttat 93  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  100380 aatcatcttttgttctctgaaataataagtgataattgtttctttgaataaaagttcacctttattttat 100449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 54; E-Value: 1e-22
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 23260 - 23349
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    ||||| |||||||  | ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  23260 ctagccatcacaaatattcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatgttc 23349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 199 - 271
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    ||||||||||||||  |||||| |||||||||||||||||| ||||||||| ||| |||||||||||||||||    
T  199 tcatcttttgttcttggaaatattaagtgacaattgtttctttgaataaaatttcaacctttattttatgttc 271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 77851 - 77923
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    |||||||||||| |  ||||||||||||||| ||||||||| |  |||||||||| |||||||||||||||||    
T  77851 tcatcttttgttattggaaataataagtgaccattgtttctttatataaaagttcaacctttattttatgttc 77923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 60; Significance: 4e-26; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 60; E-Value: 4e-26
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 17722 - 17651
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttatgttc 97  Q
    |||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17722 tcatctttggttctcggaaataataagtgacaattgtttctttgaataaaagttcacctttattttatgttc 17651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 59; Significance: 1e-25; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 59; E-Value: 1e-25
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 26940 - 26862
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26940 ctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 26862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 58; E-Value: 6e-25
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 21776 - 21715
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21776 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 21715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1323 (Bit Score: 55; Significance: 3e-23; HSPs: 1)
Name: scaffold1323
Description:

Target: scaffold1323; HSP #1
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 2000 - 1922
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  2000 ctagccatcacaaatattcatcttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcaccttta 1922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 55; Significance: 3e-23; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 2039 - 1961
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  2039 ctagccatcacaaatattcatcttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcaccttta 1961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 55; Significance: 3e-23; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 2504 - 2582
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  2504 ctagccatcacaaatattcatcttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcaccttta 2582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 55; Significance: 3e-23; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 48390 - 48468
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  48390 ctagccatcacaaatattcatcttttgttccctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 48468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 55; Significance: 3e-23; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 425121 - 425043
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  425121 ctagccatcacaaatattcatcttttgttccctgaaataataagtgacaattgtttctttgaataaaagttcaccttta 425043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 50; Significance: 3e-20; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 18842 - 18781
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    |||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  18842 tcatcttttgttctttgaaataataagggacaattgtttctttgaataaaagttcaccttta 18781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 49; Significance: 1e-19; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 8935 - 8875
Alignment:
Q  33 ttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttat 93  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  8935 ttgttctatgaaataataagtgacaattgtttctttgaataaaagttcatctttattttat 8875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 48; Significance: 5e-19; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 9285 - 9218
Alignment:
Q  31 ttttgttctctgaaataataagtgacaattgtttctctgaataaaagttca-cctttattttatgttc 97  Q
    |||||||||  ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  9285 ttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcaccctttattttatgttc 9218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 48; Significance: 5e-19; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 8932 - 8861
Alignment:
Q  27 catcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    ||||||||||||   ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  8932 catcttttgttcgtggaaataataagtgacaattgtttctttgaataaaagttcaacctttattttatgttc 8861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 47; Significance: 2e-18; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 38045 - 37967
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | ||||||||||||||||| ||||||||||||||||||||||| | || |||||||||||||||    
T  38045 ctagccatcacaaatattcatcttttgttctctgtaataataagtgacaattgtttctttaaacaaaagttcaccttta 37967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 47; Significance: 2e-18; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 19426 - 19504
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | ||||||||||||||| |||||||||||||||||||| |||| |||| |||||||||||||||    
T  19426 ctagccatcacaaatattcatcttttgttctcggaaataataagtgacaattggttctttgaacaaaagttcaccttta 19504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 47; Significance: 2e-18; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 61840 - 61918
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | ||||||||| ||||||||||||||||||||||||||||||| ||||||||| || |||||||    
T  61840 ctagccatcacaaatattcatcttttcttctctgaaataataagtgacaattgtttctttgaataaaaattgaccttta 61918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1559 (Bit Score: 44; Significance: 1e-16; HSPs: 1)
Name: scaffold1559
Description:

Target: scaffold1559; HSP #1
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 1411 - 1478
Alignment:
Q  24 aatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttatttt 91  Q
    ||||||||||||||||  ||||||||||||||||| ||||||| |||||||||||||| || ||||||    
T  1411 aatcatcttttgttcttggaaataataagtgacaactgtttctttgaataaaagttcatctctatttt 1478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 43; Significance: 5e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 13717 - 13795
Alignment:
Q  9 ctagctatcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcaccttta 87  Q
    ||||| |||||||  | ||||||||||||||| ||||||| ||||||||||||||| | |||||||||||||| |||||    
T  13717 ctagccatcacaaatattcatcttttgttctcggaaataaaaagtgacaattgtttatttgaataaaagttcaacttta 13795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 41; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 3525 - 3597
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    ||||||||| ||||  ||||||||||||||||||||| ||| ||||||| ||||| |||||||||||||||||    
T  3525 tcatcttttcttcttggaaataataagtgacaattgtctctttgaataatagttcaacctttattttatgttc 3597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 40; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 49904 - 49975
Alignment:
Q  27 catcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc-acctttattttatgttc 97  Q
    |||||||||||||  |||||||||||||||||||||| || ||| ||||| ||| |||||||||||||||||    
T  49904 catcttttgttcttggaaataataagtgacaattgttcctttgagtaaaaattcaacctttattttatgttc 49975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 39; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 38505 - 38559
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttc 80  Q
    ||||||||||||||  ||||| ||||||||||||||||||| |||||||||||||    
T  38505 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc 38559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 36; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 3478 - 3544
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttat 93  Q
    ||||||||||||||  ||||| |||||||||||||||||||  ||||||||||||  |||||||||||    
T  3478 tcatcttttgttcttggaaattataagtgacaattgtttcttagaataaaagttc-tctttattttat 3544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 36; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 3643 - 3709
Alignment:
Q  26 tcatcttttgttctctgaaataataagtgacaattgtttctctgaataaaagttcacctttattttat 93  Q
    ||||||||||||||  ||||| |||||||||||||||||||  ||||||||||||  |||||||||||    
T  3643 tcatcttttgttcttggaaattataagtgacaattgtttcttagaataaaagttc-tctttattttat 3709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 32; Significance: 0.000000002; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 21657 - 21728
Alignment:
Q  23 aaatcatcttttgttctctgaaataataagtgacaattg-tttctctgaataaaagttcacctttattttat 93  Q
    ||||||||||||||||| |||| | |  ||||||||||| ||||| | |||||||||||| |||||||||||    
T  21657 aaatcatcttttgttctttgaatttaatagtgacaattgttttcttttaataaaagttcatctttattttat 21728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713 (Bit Score: 30; Significance: 0.00000003; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 6774 - 6738
Alignment:
Q  27 catcttttgttctctgaaataataagtgacaattgttt 64  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  6774 catcttttgttct-tgaaataataagtgacaattgttt 6738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University