View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20240_low_20 (Length: 275)

Name: NF20240_low_20
Description: NF20240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20240_low_20
NF20240_low_20
[»] chr8 (4 HSPs)
chr8 (23-252)||(18951647-18951876)
chr8 (23-259)||(18965693-18965927)
chr8 (23-124)||(36167191-36167292)
chr8 (23-124)||(41481192-41481293)
[»] scaffold0003 (1 HSPs)
scaffold0003 (23-124)||(342745-342846)
[»] chr7 (9 HSPs)
chr7 (23-124)||(25857658-25857759)
chr7 (23-124)||(4836069-4836170)
chr7 (23-124)||(24379789-24379890)
chr7 (23-124)||(4843174-4843275)
chr7 (40-99)||(4603262-4603321)
chr7 (18-124)||(27341455-27341561)
chr7 (23-110)||(38994617-38994705)
chr7 (34-124)||(17845444-17845534)
chr7 (65-115)||(13466196-13466246)
[»] scaffold0479 (1 HSPs)
scaffold0479 (23-124)||(2311-2412)
[»] chr3 (5 HSPs)
chr3 (23-124)||(54967735-54967836)
chr3 (23-124)||(44783047-44783148)
chr3 (23-124)||(54980367-54980468)
chr3 (24-124)||(39298368-39298468)
chr3 (40-124)||(17645370-17645454)
[»] chr5 (1 HSPs)
chr5 (40-124)||(22764039-22764123)
[»] chr4 (5 HSPs)
chr4 (23-124)||(37287385-37287486)
chr4 (23-101)||(3346345-3346423)
chr4 (27-88)||(42683366-42683427)
chr4 (40-121)||(9757735-9757815)
chr4 (35-124)||(38394105-38394194)
[»] chr2 (1 HSPs)
chr2 (23-97)||(37037555-37037629)
[»] scaffold0045 (1 HSPs)
scaffold0045 (23-124)||(26933-27034)
[»] chr1 (1 HSPs)
chr1 (43-124)||(27641318-27641400)


Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 23 - 252
Target Start/End: Original strand, 18951647 - 18951876
Alignment:
Q  23 atacactacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggac 122  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18951647 atacactacaccatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggtcatgtggcaatggctggac 18951746  T
Q  123 ccacaataatttctctcaaaaagtaaaatttgaaaaatttatcttttaacactctcaatcactactacaattttagttatttatagtgccactttaatag 222  Q
    ||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18951747 ccataataatttctctcaaaaagtaaaatttcaaaaatttctcttttaacactctcaatcactactacaattttagttatttatagtgccactttaatag 18951846  T
Q  223 ccctttctataacatgatcctagtacaaaa 252  Q
    ||||||| ||||||||||||||||| ||||    
T  18951847 ccctttcaataacatgatcctagtaaaaaa 18951876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 23 - 259
Target Start/End: Complemental strand, 18965927 - 18965693
Alignment:
Q  23 atacactacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggac 122  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||| | || ||||||||||||||||  |||||||||||||| ||||||||||||    
T  18965927 atacactacaccatgtgtacaccatgcatcttgctacttgtcatcacatactacgttccattttgtcaaatacatgttggccatgtgacaatggctggac 18965828  T
Q  123 ccacaataatttctctcaaaaagtaaaatttgaaaaatttatcttttaacactctcaatcactactacaattttagttatttatagtgccactttaatag 222  Q
    ||||||||||||||||||||||  ||||||| |||| ||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  18965827 ccacaataatttctctcaaaaaacaaaatttcaaaattttctcttttaaca--ctcaatcactactacaattttagttatttatagtgccactttaatag 18965730  T
Q  223 ccctttctataacatgatcctagtacaaaataattga 259  Q
    | ||||| ||||||||||||||||| |||| ||||||    
T  18965729 cgctttcaataacatgatcctagtaaaaaaaaattga 18965693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 36167292 - 36167191
Alignment:
Q  23 atacactacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggac 122  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  36167292 atacactacaccatgtgtacaccatgcatcttgctacttgtcatcacatgcaaccttccatcttgtcaaatgtatgttggacatgtggcaatggctggac 36167193  T
Q  123 cc 124  Q
    ||    
T  36167192 cc 36167191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 41481293 - 41481192
Alignment:
Q  23 atacactacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggac 122  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||    
T  41481293 atacactacaccatgtgtacaccatgcatcttgctacttgtcatcacatgcaaccttccatcttgtcaaatgtatgttggacatgtagcaatggctggac 41481194  T
Q  123 cc 124  Q
    ||    
T  41481193 cc 41481192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 342745 - 342846
Alignment:
Q  23 atacactacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggac 122  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  342745 atacactacaccatgtgtacaccatgcatcttgctacttgtcatcacatgcaaccttccattttgtcaaatgtatgttggacatgtggcaatggctggac 342844  T
Q  123 cc 124  Q
    ||    
T  342845 cc 342846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 1e-43; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 25857658 - 25857759
Alignment:
Q  23 atacactacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggac 122  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25857658 atacactacaccatgtgtacaccatgcatcttgctacttgtcatcacatgcaaccttccattttgtcaaatgtatgttggacatgtggcaatggctggac 25857757  T
Q  123 cc 124  Q
    ||    
T  25857758 cc 25857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 4836069 - 4836170
Alignment:
Q  23 atacactacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggac 122  Q
    |||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4836069 atacactacaccatgtgtacaccatgcaccttgctacttgtcatcacatgcaaccttccatcttgtcaaatgtatgttggccatgtggcaatggctggac 4836168  T
Q  123 cc 124  Q
    ||    
T  4836169 cc 4836170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 24379789 - 24379890
Alignment:
Q  23 atacactacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggac 122  Q
    |||||||||| |||||||||||||||||||||||| ||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24379789 atacactacaccatgtgtacaccatgcatcttgctgcttgttatcagatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggac 24379888  T
Q  123 cc 124  Q
    ||    
T  24379889 cc 24379890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 4843174 - 4843275
Alignment:
Q  23 atacactacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggac 122  Q
    |||||||||| ||||||||||| ||||| |||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  4843174 atacactacaccatgtgtacacaatgcaccttgctacttctcatcacatgcaaccttccatcttgccaaatgtatgttggccatgtggcaatggctggac 4843273  T
Q  123 cc 124  Q
    ||    
T  4843274 cc 4843275  T

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Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 4603321 - 4603262
Alignment:
Q  40 tacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgt 99  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4603321 tacaccatgcatcttgctacttgtcatcacatgcaaccttccattttgtcaaatgtatgt 4603262  T

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Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 27341455 - 27341561
Alignment:
Q  18 aactaatacactacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggc 117  Q
    |||| ||| |||||| ||||||||||||||||  |||||||||| ||||| | |||||| |||| |||||||||||| || |||||||||||||||||||    
T  27341455 aactcatatactacaccatgtgtacaccatgccccttgctacttgtcatctcgtgcaactttcccttttgtcaaatgcatattggccatgtggcaatggc 27341554  T
Q  118 tggaccc 124  Q
    | |||||    
T  27341555 tagaccc 27341561  T

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Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 38994617 - 38994705
Alignment:
Q  23 atacactacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttcca-ttttgtcaaatgtatgttggccatgtgg 110  Q
    ||||||||| ||||||||||  |||||| |||||||||| |||||||||||||| ||||| |||||||||||||||||| | |||||||    
T  38994617 atacactacttcatgtgtacttcatgcaccttgctacttgtcatcacatgcaacattccatttttgtcaaatgtatgttcgtcatgtgg 38994705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 17845534 - 17845444
Alignment:
Q  34 catgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggaccc 124  Q
    ||||||||||||||||| |||  ||||| || ||||||||||||||| ||||| |||||| ||||||||| ||||| ||||||||| ||||    
T  17845534 catgtgtacaccatgcaccttattacttgtcttcacatgcaaccttctattttatcaaatatatgttggcgatgtgacaatggctgaaccc 17845444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 13466196 - 13466246
Alignment:
Q  65 atcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatg 115  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||| |||||    
T  13466196 atcacatgcaaccttctattttgtcaaatatatgttgtccatgtgacaatg 13466246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 2412 - 2311
Alignment:
Q  23 atacactacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggac 122  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||    
T  2412 atacactacaccatgtgtacaccatgcatcttgctacttgtcatcacatgaaaccttccatcttgtcaaatgtatgttggacatgtggcaatggctggac 2313  T
Q  123 cc 124  Q
    ||    
T  2312 cc 2311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 9e-39; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 54967735 - 54967836
Alignment:
Q  23 atacactacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggac 122  Q
    |||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  54967735 atacactacaccatgtgtacaccatgcatcctgctacttatcatcacatgcaaccttccatcttgtcaaatgtatgttggacatgtggcaatggctggac 54967834  T
Q  123 cc 124  Q
    ||    
T  54967835 cc 54967836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 44783047 - 44783148
Alignment:
Q  23 atacactacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggac 122  Q
    |||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  44783047 atacactacaccatgtgtacaccatgcatcttgctacttgtcaccacatgcaaccttccatcttgtcaaatgtatgttgaacatgtggcaatggctggac 44783146  T
Q  123 cc 124  Q
    ||    
T  44783147 cc 44783148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 54980367 - 54980468
Alignment:
Q  23 atacactacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggac 122  Q
    |||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  54980367 atacactacaccatgtgtacaccatgcatcctgctacttgtcatcacatgcaaccttccatcttgtcaaatgtatgttggacatgcggcaatggctggac 54980466  T
Q  123 cc 124  Q
    ||    
T  54980467 cc 54980468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 39298468 - 39298368
Alignment:
Q  24 tacactacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggacc 123  Q
    |||||||||  |||||||||||||||| |||  ||||| ||||||||||||| ||||||||||||||||  |||||||||||||||| | | ||||||||    
T  39298468 tacactacactatgtgtacaccatgcaccttaatacttatcatcacatgcaatcttccattttgtcaaacctatgttggccatgtgggagttgctggacc 39298369  T
Q  124 c 124  Q
    |    
T  39298368 c 39298368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 17645454 - 17645370
Alignment:
Q  40 tacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggaccc 124  Q
    |||||||| || | |||||||| | |||||||||||||||| | ||||||||||  | |||||||| |||||||| | |||||||    
T  17645454 tacaccatacaccctgctacttgtgatcacatgcaaccttcgagtttgtcaaatacaagttggccacgtggcaatcgatggaccc 17645370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 22764123 - 22764039
Alignment:
Q  40 tacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggaccc 124  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  22764123 tacaccatgcatcttgctacttgtcatcacatgcaaccttccattttgtcaaatgtatgttggacatgtggcaatggttggaccc 22764039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 37287385 - 37287486
Alignment:
Q  23 atacactacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggac 122  Q
    |||||||||| ||||||||||| ||||| ||| | |  | |||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||    
T  37287385 atacactacaccatgtgtacactatgcaccttaccatatctcatcacatgcaaccttctattttatcaaatgtatgttggctatgtggcaatggctggac 37287484  T
Q  123 cc 124  Q
    ||    
T  37287485 cc 37287486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 3346423 - 3346345
Alignment:
Q  23 atacactacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttg 101  Q
    |||||||||| ||| |||||| |||||| ||||||| || |||||||| ||||||||||||||||||||||||||||||    
T  3346423 atacactacaccatatgtacatcatgcaccttgctatttgtcatcacaagcaaccttccattttgtcaaatgtatgttg 3346345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 42683366 - 42683427
Alignment:
Q  27 actacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgt 88  Q
    |||||||||||||||||||||||| |||| ||||| ||||||||| ||||||| ||||||||    
T  42683366 actacatcatgtgtacaccatgcaccttgttacttgtcatcacatacaacctttcattttgt 42683427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 9757735 - 9757815
Alignment:
Q  40 tacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctgga 121  Q
    ||||||||| ||||| |||||| ||||||||| | |||||||||||||||||| ||||| ||  ||||||||||||| ||||    
T  9757735 tacaccatgtatcttactacttgtcatcacatactaccttccattttgtcaaa-gtatgctgtacatgtggcaatggttgga 9757815  T

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Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 38394105 - 38394194
Alignment:
Q  35 atgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggaccc 124  Q
    ||||||||| | ||||  ||||||||| |||||||||||||| ||| ||||| |||||||||||||| ||| ||| ||||| || |||||    
T  38394105 atgtgtacatcgtgcacgttgctacttgtcatcacatgcaacattctattttatcaaatgtatgttgaccacgtgacaatgactagaccc 38394194  T

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Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 37037629 - 37037555
Alignment:
Q  23 atacactacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtat 97  Q
    |||||||||| ||||||||||||||||| ||| |||||| ||||||||||||||||| |||||||||||||||||    
T  37037629 atacactacaccatgtgtacaccatgcaccttactacttgtcatcacatgcaacctttcattttgtcaaatgtat 37037555  T

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Target: scaffold0045 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 26933 - 27034
Alignment:
Q  23 atacactacatcatgtgtacaccatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtggcaatggctggac 122  Q
    ||||||||||  || |||||||||| || |||||||||| ||||||||||||||||| |||||||||||||||||||||||   |||||||| | |||||    
T  26933 atacactacactatttgtacaccatacaccttgctacttgtcatcacatgcaacctttcattttgtcaaatgtatgttggcggcgtggcaatagttggac 27032  T
Q  123 cc 124  Q
    ||    
T  27033 cc 27034  T

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Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 124
Target Start/End: Complemental strand, 27641400 - 27641318
Alignment:
Q  43 accatgcatcttgctacttttcatcacatgcaaccttccattttgtcaaatgtatgttggccatgtgg-caatggctggaccc 124  Q
    ||||||||  ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| ||||||||    
T  27641400 accatgcacattgctacttgtcatcacatgcaaccttccatgttgtcaaatgtatgttggccaagtggccaatgactggaccc 27641318  T

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