View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20242_low_84 (Length: 210)
Name: NF20242_low_84
Description: NF20242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20242_low_84 |
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Alignment Details
Target: chr3 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 24 - 192
Target Start/End: Original strand, 32266856 - 32267024
Alignment:
| Q |
24 |
atagtagagaaaagtgaactaatcgtccaagaattgcttatgccatttttcttctcatacattggcataacaacaaatttaaaaggaattgccaaaaatt |
123 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32266856 |
atagtagagaaaagtgaactaatcgtccaagaattgcttatgccatttttcttctcatacattggcataacaacaaatttaaaaggaattgccaaaaatt |
32266955 |
T |
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| Q |
124 |
ggaaggtggtgtttgtatttcagagtatcttatttgttgggttcttggcaaaggttcttgcatgcgtct |
192 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32266956 |
ggaaggtggtatttgtatttcagagtatcttatttgttgggttcttggcaaaggttcttgcatgcgtct |
32267024 |
T |
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