View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20244_low_12 (Length: 317)
Name: NF20244_low_12
Description: NF20244
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20244_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 12 - 299
Target Start/End: Original strand, 21642303 - 21642590
Alignment:
| Q |
12 |
atgaacatgaaatccaaatgggatataaaaggtccagatccaacaaaaccgaaaatcaatgttttgttgaaccatttcaagagaaaaacactttgtgctc |
111 |
Q |
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| T |
21642303 |
atgaacatgaaatccaaatgggatataaaaggtccaaatccaacaaaaccgaaaatcaatgttttgttgaaccatttcaagagaaaaacactttgtgctc |
21642402 |
T |
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| Q |
112 |
aacttgattcattgcttcaacaaaccctaccttttcatcaagtttgggtgctttcgttcggaagtccaaacgaggcgtccctcaagagaatcgtggaaag |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
21642403 |
aacttgattcattgcttcaacaaaccctaccttttcatcaagtttgggtgctttctttcggcagtccaaacgaggcgtccctcaagagaatcgtggaaag |
21642502 |
T |
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| Q |
212 |
ctataacgattcgcggataagtttcataagctcgagttacgattttaagtactatggaaggtttcaaatggctttgcagacagaagct |
299 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21642503 |
ctataacgattcgcggataagtttcataagctcgagttatgattttaagtactatggaaggtttcaaatggctttgcagacagaagct |
21642590 |
T |
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