View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20244_low_20 (Length: 264)

Name: NF20244_low_20
Description: NF20244
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20244_low_20
NF20244_low_20
[»] chr7 (23 HSPs)
chr7 (16-254)||(3419010-3419244)
chr7 (70-254)||(3419321-3419503)
chr7 (55-205)||(31971783-31971933)
chr7 (55-207)||(5859931-5860083)
chr7 (63-207)||(44353220-44353364)
chr7 (56-205)||(47325534-47325682)
chr7 (56-205)||(10244463-10244612)
chr7 (57-205)||(3867398-3867545)
chr7 (56-207)||(25161090-25161240)
chr7 (56-202)||(33434480-33434626)
chr7 (57-207)||(41089396-41089543)
chr7 (95-205)||(38306543-38306653)
chr7 (62-201)||(34391469-34391608)
chr7 (62-195)||(6585179-6585312)
chr7 (62-207)||(37795277-37795422)
chr7 (62-207)||(37795605-37795750)
chr7 (62-207)||(42454389-42454534)
chr7 (62-207)||(43482186-43482330)
chr7 (56-207)||(40726140-40726305)
chr7 (62-153)||(11378776-11378866)
chr7 (62-175)||(48161696-48161808)
chr7 (62-120)||(35745487-35745545)
chr7 (55-120)||(31756318-31756383)
[»] chr8 (25 HSPs)
chr8 (56-207)||(31207011-31207162)
chr8 (56-205)||(32065934-32066082)
chr8 (56-205)||(9519789-9519938)
chr8 (56-205)||(12897925-12898074)
chr8 (63-207)||(20138707-20138851)
chr8 (56-205)||(22773904-22774053)
chr8 (63-207)||(36631104-36631247)
chr8 (62-205)||(24995050-24995193)
chr8 (62-205)||(37986510-37986653)
chr8 (62-203)||(16457130-16457270)
chr8 (87-207)||(27889127-27889247)
chr8 (87-207)||(27947785-27947905)
chr8 (57-207)||(35821537-35821685)
chr8 (62-207)||(15821032-15821176)
chr8 (62-207)||(35815899-35816044)
chr8 (62-197)||(3584028-3584164)
chr8 (56-201)||(38577435-38577580)
chr8 (62-149)||(13538324-13538411)
chr8 (62-149)||(13686063-13686150)
chr8 (111-205)||(34388711-34388805)
chr8 (55-116)||(9659474-9659535)
chr8 (55-207)||(41893051-41893204)
chr8 (55-143)||(37267882-37267964)
chr8 (56-93)||(34866309-34866346)
chr8 (68-136)||(41309933-41310002)
[»] chr1 (15 HSPs)
chr1 (56-207)||(30685573-30685724)
chr1 (63-207)||(46814121-46814265)
chr1 (55-205)||(31584688-31584837)
chr1 (55-205)||(41920740-41920890)
chr1 (62-202)||(24449586-24449725)
chr1 (55-205)||(24684141-24684290)
chr1 (62-205)||(5459443-5459581)
chr1 (56-203)||(7002474-7002619)
chr1 (62-190)||(40216161-40216289)
chr1 (63-205)||(5389084-5389221)
chr1 (63-200)||(6804825-6804962)
chr1 (107-205)||(46692519-46692618)
chr1 (62-201)||(24659217-24659345)
chr1 (56-153)||(14320658-14320755)
chr1 (62-151)||(27031496-27031585)
[»] chr4 (19 HSPs)
chr4 (55-207)||(30964718-30964870)
chr4 (56-207)||(8255308-8255459)
chr4 (56-207)||(8268726-8268877)
chr4 (56-205)||(27555579-27555729)
chr4 (55-190)||(35329305-35329440)
chr4 (56-205)||(36689454-36689603)
chr4 (56-207)||(30167212-30167365)
chr4 (72-205)||(20464872-20465005)
chr4 (55-201)||(4305994-4306137)
chr4 (56-157)||(7703018-7703118)
chr4 (56-203)||(8705789-8705932)
chr4 (62-201)||(31050316-31050453)
chr4 (62-201)||(2826071-2826207)
chr4 (56-139)||(9750116-9750198)
chr4 (62-153)||(46698434-46698525)
chr4 (62-153)||(49528421-49528512)
chr4 (56-151)||(35341000-35341097)
chr4 (57-190)||(11281375-11281508)
chr4 (62-154)||(52868766-52868859)
[»] chr3 (24 HSPs)
chr3 (63-203)||(2392159-2392299)
chr3 (63-203)||(2393922-2394062)
chr3 (62-207)||(47235979-47236124)
chr3 (55-205)||(31483163-31483313)
chr3 (55-207)||(34475406-34475558)
chr3 (56-203)||(45164139-45164285)
chr3 (56-207)||(19176787-19176938)
chr3 (56-207)||(53248181-53248332)
chr3 (56-201)||(21343635-21343779)
chr3 (83-198)||(30352115-30352230)
chr3 (56-207)||(40023218-40023369)
chr3 (62-201)||(50305229-50305368)
chr3 (64-197)||(9583710-9583843)
chr3 (86-207)||(43012658-43012779)
chr3 (63-203)||(17551242-17551382)
chr3 (62-154)||(45399119-45399211)
chr3 (62-154)||(23328003-23328095)
chr3 (55-154)||(50559978-50560077)
chr3 (62-174)||(37158618-37158731)
chr3 (56-151)||(25506719-25506814)
chr3 (56-153)||(4463734-4463831)
chr3 (56-119)||(47439284-47439347)
chr3 (55-112)||(39020990-39021046)
chr3 (55-120)||(5556947-5557012)
[»] chr5 (10 HSPs)
chr5 (56-205)||(34378382-34378531)
chr5 (55-201)||(18593529-18593675)
chr5 (63-204)||(5656749-5656890)
chr5 (95-207)||(29087759-29087871)
chr5 (55-207)||(7161662-7161814)
chr5 (62-197)||(698658-698793)
chr5 (56-163)||(7452913-7453020)
chr5 (55-149)||(18255098-18255192)
chr5 (63-207)||(18313310-18313444)
chr5 (107-158)||(41250893-41250944)
[»] chr2 (23 HSPs)
chr2 (56-207)||(387457-387608)
chr2 (56-207)||(39338510-39338662)
chr2 (56-189)||(10524397-10524529)
chr2 (56-205)||(41877201-41877350)
chr2 (62-201)||(5254540-5254678)
chr2 (62-201)||(14436922-14437059)
chr2 (62-201)||(14106178-14106314)
chr2 (66-207)||(22888552-22888692)
chr2 (55-152)||(13512487-13512584)
chr2 (62-201)||(14405487-14405624)
chr2 (55-153)||(3745676-3745774)
chr2 (55-151)||(43816095-43816191)
chr2 (72-154)||(17116553-17116635)
chr2 (62-182)||(7874582-7874703)
chr2 (62-151)||(43248882-43248971)
chr2 (55-153)||(45311452-45311550)
chr2 (57-133)||(15457817-15457893)
chr2 (62-201)||(7460965-7461101)
chr2 (56-120)||(9823697-9823761)
chr2 (63-116)||(25280971-25281024)
chr2 (63-139)||(7455601-7455676)
chr2 (138-203)||(25281030-25281095)
chr2 (149-207)||(25281085-25281143)
[»] chr6 (8 HSPs)
chr6 (56-207)||(3254238-3254389)
chr6 (56-207)||(15944280-15944431)
chr6 (62-205)||(3117777-3117920)
chr6 (63-205)||(10542114-10542255)
chr6 (62-140)||(15132495-15132573)
chr6 (99-153)||(33697789-33697843)
chr6 (154-207)||(14663361-14663414)
chr6 (62-129)||(14663414-14663479)
[»] scaffold0172 (1 HSPs)
scaffold0172 (57-207)||(19199-19349)
[»] scaffold0434 (1 HSPs)
scaffold0434 (79-205)||(2345-2471)
[»] scaffold0343 (1 HSPs)
scaffold0343 (62-203)||(5989-6131)
[»] scaffold0085 (1 HSPs)
scaffold0085 (62-207)||(48616-48761)
[»] scaffold0068 (1 HSPs)
scaffold0068 (55-109)||(35472-35526)


Alignment Details
Target: chr7 (Bit Score: 150; Significance: 2e-79; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 16 - 254
Target Start/End: Original strand, 3419010 - 3419244
Alignment:
Q  16 aaaaccacctaaaaactttaatttaaatattannnnnnngaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagat 115  Q
    |||||||||||||| |||||||||||||||||        |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  3419010 aaaaccacctaaaa-ctttaatttaaatattattttttt-aatcgacaaatattattaaacgtcatccccgcaagacgcaaggtatggacgaaacaagat 3419107  T
Q  116 acaaacgttgccgcatatagacggtacatcataaccacctaaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacagaatccnnnn 215  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  3419108 acaaacgttgccgcata--gacggtacaccataaccacctaaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacagaatccaaaa 3419205  T
Q  216 nnncaagcatcgtaaacatgatatccaccatcgttcatc 254  Q
       ||||||| ||||||||||||||||||| ||||||||    
T  3419206 aaacaagcattgtaaacatgatatccaccaccgttcatc 3419244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 70 - 254
Target Start/End: Original strand, 3419321 - 3419503
Alignment:
Q  70 attaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaacactcctga 169  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||    
T  3419321 attaaacgccatccccgcaagacgcaaggtatggacgaaacaagatacaaacgttgccgcata--gacggtacaccataaccacctaaaaacactcctga 3419418  T
Q  170 agataaactcaccaaaacacaacaccacctaaaacagaatccnnnnnnncaagcatcgtaaacatgatatccaccatcgttcatc 254  Q
    ||||||||||||||||||||||||||||||||||||||||||       ||| ||| ||||||||||||||||||| ||||||||    
T  3419419 agataaactcaccaaaacacaacaccacctaaaacagaatccaaaaaaacaancattgtaaacatgatatccaccaccgttcatc 3419503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 55 - 205
Target Start/End: Original strand, 31971783 - 31971933
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacc 154  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||    
T  31971783 gaatcggcaaatattattaaacgccatccccgcaagacgcaaggtatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataaccacc 31971882  T
Q  155 taaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    ||||||||| ||||||||||||| ||||||||||||  |||||||||||||    
T  31971883 taaaaacacccctgaagataaacccaccaaaacacataaccacctaaaaca 31971933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 207
Target Start/End: Original strand, 5859931 - 5860083
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacc 154  Q
    |||||| |||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||| | |||||||||||||||||||| ||||||||||    
T  5859931 gaatcggcaaatattattaaacgtcatccccgcaagacgcatgatatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataaccacc 5860030  T
Q  155 taaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    ||||||||| ||| ||||||| | |||||||||||| ||||||||||||||||    
T  5860031 taaaaacacccctaaagataatcccaccaaaacacatcaccacctaaaacaga 5860083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 63 - 207
Target Start/End: Original strand, 44353220 - 44353364
Alignment:
Q  63 aaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaaca 162  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||||    
T  44353220 aaatattattaaacgccatccccgcaagacgcaaagtatggacgaaacaagatacaaatggtgccgcatatagatggtacaccataaccacctaaaaaca 44353319  T
Q  163 ctcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    | | || |||||||| |||||||||||| ||||||||||||||||    
T  44353320 cccatggagataaacccaccaaaacacatcaccacctaaaacaga 44353364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 56 - 205
Target Start/End: Original strand, 47325534 - 47325682
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| |||||||||||||||| ||||| || |||||| |||||||||||||||||||||||||| | ||| |||||||||||||||| |||||||||||    
T  47325534 aatcggcaaatattattaaacgtcatcctcgtaagacgcaaggtatggacgaaacaagatacaaatggtgctgcatatagacggtacaccataaccacct 47325633  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||    
T  47325634 aaaaacact-ctgaagataaacccaccaaaacacatcaccacctaaaaca 47325682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 56 - 205
Target Start/End: Complemental strand, 10244612 - 10244463
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| ||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||||| ||||| |||||||||||    
T  10244612 aatcggcaaatattattaaactccatctccgcaagacgcaaggtatggacgaaacaagatacaaatggtgccgcatatagacagtacaccataaccacct 10244513  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    |||||||| |||||||||||   ||| |||||||| ||||||||||||||    
T  10244512 aaaaacacccctgaagataagtccacgaaaacacatcaccacctaaaaca 10244463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 57 - 205
Target Start/End: Complemental strand, 3867545 - 3867398
Alignment:
Q  57 atcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccaccta 156  Q
    |||| |||||||||||||||  |||||| |||||||||||||||| |||||||||||||||||| | |||| ||||||||||||||| |||||| || ||    
T  3867545 atcggcaaatattattaaacttcatccc-gcaagacgtaaggtattgacgaaacaagatacaaatggtgccacatatagacggtacaccataacaacata 3867447  T
Q  157 aaaacactcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    ||||||| |||||||||||||||||||||||||| ||||||| ||||||    
T  3867446 aaaacacccctgaagataaactcaccaaaacacatcaccacccaaaaca 3867398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 56 - 207
Target Start/End: Complemental strand, 25161240 - 25161090
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| |||||||||||||||| |||||||| ||||  ||||||||| |||||||||||| |||| | ||||| |||||||||||||| |||||||||||    
T  25161240 aatcggcaaatattattaaacgtcatccccgtaagatttaaggtatgaacgaaacaagatgcaaatggtgccgtatatagacggtacaccataaccacct 25161141  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    |||||||| |||| |||||||| |||||||||||| ||||||||||||||||    
T  25161140 aaaaacac-cctggagataaacccaccaaaacacatcaccacctaaaacaga 25161090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 56 - 202
Target Start/End: Original strand, 33434480 - 33434626
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| | | | | |||||||||||||| |||||||||||    
T  33434480 aatcggcaaatattattaaacgccatccccgcaatacgcaaggtatggacgaagcaagatacaaatggttctgtatatagacggtacaccataaccacct 33434579  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaa 202  Q
    |||||||| |||| | |||||| |||||||||||| |||||||||||    
T  33434580 aaaaacacccctggaaataaacccaccaaaacacatcaccacctaaa 33434626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 207
Target Start/End: Original strand, 41089396 - 41089543
Alignment:
Q  57 atcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccaccta 156  Q
    |||| |||||||||||||| |||||| | |||||||  |||||||||||||||||||||||||  || ||||||||||||||||||| ||||||||||||    
T  41089396 atcggcaaatattattaaatgccatctctgcaagac--aaggtatggacgaaacaagatacaatggt-gccgcatatagacggtacaccataaccaccta 41089492  T
Q  157 aaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    ||||||| | ||||||||||  |||||||||||| || |||||||||||||    
T  41089493 aaaacacccatgaagataaatccaccaaaacacatcatcacctaaaacaga 41089543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 95 - 205
Target Start/End: Complemental strand, 38306653 - 38306543
Alignment:
Q  95 aaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaacactcctgaagataaactcaccaaaacacaacac 194  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| ||| |||||||||  ||||||||||| |||    
T  38306653 aaggtatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataaccacctaaaaacacccctaaagataaaccaaccaaaacacatcac 38306554  T
Q  195 cacctaaaaca 205  Q
    |||||||||||    
T  38306553 cacctaaaaca 38306543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 62 - 201
Target Start/End: Complemental strand, 34391608 - 34391469
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||| |||||||||| |||| | ||||||||||||||||||||||||   ||||||||||||||| |||| |||||||||| || ||     
T  34391608 caaatattattaaacgtcatccccgcaggacgcagggtatggacgaaacaagatacaaataatgccgcatatagacgatacaccataaccaccaaacaaa 34391509  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaa 201  Q
     | ||||||||||||| |||||||||||| ||||||||||    
T  34391508 gcccctgaagataaacccaccaaaacacatcaccacctaa 34391469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 62 - 195
Target Start/End: Complemental strand, 6585312 - 6585179
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||| | |||| ||||||||||||||| |||||||||| || ||     
T  6585312 caaatattattaaacgccatccccgcaagatgcaaggaatggacgaaacaagatacaaatggtgccacatatagacggtacaccataaccaccaaacaaa 6585213  T
Q  162 actcctgaagataaactcaccaaaacacaacacc 195  Q
    || ||||||||||||  |||| ||||||| ||||    
T  6585212 acccctgaagataaagccacctaaacacatcacc 6585179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 62 - 207
Target Start/End: Complemental strand, 37795422 - 37795277
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||| | ||||| ||||||| |||||||||||||||||||||||||| | || |||   || |||||||| |||||||||||||||||    
T  37795422 caaatattattaaacgtcgtccccacaagacgcaaggtatggacgaaacaagatacaaatggtgtcgcgattaaacggtacaccataaccacctaaaaac 37795323  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    || | ||||||||||| ||| |||||| | ||||||||||||||||    
T  37795322 acccatgaagataaacccacaaaaacatatcaccacctaaaacaga 37795277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 62 - 207
Target Start/End: Complemental strand, 37795750 - 37795605
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||| | ||||| ||||||| |||||||||||||||||||||||||| | || |||   || |||||||| |||||||||||||||||    
T  37795750 caaatattattaaacgtcgtccccacaagacgcaaggtatggacgaaacaagatacaaatggtgtcgcgattaaacggtacaccataaccacctaaaaac 37795651  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    || | ||||||||||| ||| |||||| | ||||||||||||||||    
T  37795650 acccatgaagataaacccacaaaaacatatcaccacctaaaacaga 37795605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 62 - 207
Target Start/End: Original strand, 42454389 - 42454534
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||  ||||||||||||||| ||| ||| ||||||||||| |||||| | |||||||||||||| ||||| ||||||||||||||||     
T  42454389 caaatattattaaacatcatccccgcaagacgcaagatatagacgaaacaaggtacaaatggtgccgcatatagacagtacaccataaccacctaaaaaa 42454488  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    |  | ||||||||||| |||||||||||| |   ||||||||||||    
T  42454489 atccttgaagataaacccaccaaaacacatccttacctaaaacaga 42454534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 62 - 207
Target Start/End: Complemental strand, 43482330 - 43482186
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||| |||||||| | |||| ||||||||||||||| ||||||||||   ||| ||||| |||||||||| || ||||||||||||||    
T  43482330 caaatattattaaacgtcatccccgta-gacgcaaggtatggacgaaataagatacaaatagtgctgcatacagacggtacaccacaaccacctaaaaac 43482232  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    |  | |  |||||||| ||| |||||||||||||||||||||||||    
T  43482231 atccattgagataaacccacaaaaacacaacaccacctaaaacaga 43482186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 207
Target Start/End: Original strand, 40726140 - 40726305
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagataca--------------aacgttgccgcatatagacggta 141  Q
    ||||| |||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||              || | |||  |||||||||||||    
T  40726140 aatcggcaaatattattaaatgtcatccccgcaagacgcaaggtatggacgaaacaagatacacgaaacaaaatacaaatgatgctacatatagacggta 40726239  T
Q  142 catcataaccacctaaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    || ||||||||||||||||||| |||| |||||||| ||||||||||||  |||||||||||||||    
T  40726240 caccataaccacctaaaaacacccctggagataaacccaccaaaacacattaccacctaaaacaga 40726305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 11378776 - 11378866
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccac 153  Q
    ||||||||||||||||||| |||||||||||| |||||||||||| || |||||||| | | ||||||||||| |||||||| |||||||||    
T  11378776 caaatattattaaacgccaaccccgcaagacgcaaggtatggacg-aataagatacagatgatgccgcatataaacggtacaccataaccac 11378866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 175
Target Start/End: Original strand, 48161696 - 48161808
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||| |||||| |||||||  ||| |||||||||| ||| |||||||   |||||||||||||||| ||| ||||||||||||| ||     
T  48161696 caaatattattaaacgtcatccctgcaagacacaagatatggacgaa-caaaatacaaatagtgccgcatatagacggcacaccataaccacctaacaaa 48161794  T
Q  162 actcctgaagataa 175  Q
     | |||||||||||    
T  48161795 gcccctgaagataa 48161808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 35745487 - 35745545
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaa 120  Q
    |||||||||||||||| |||| ||| || ||| ||||||||||||||||||||||||||    
T  35745487 caaatattattaaacgtcatctccgtaaaacgcaaggtatggacgaaacaagatacaaa 35745545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 31756318 - 31756383
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaa 120  Q
    ||||| ||||||||||||||||| ||||||| |||| || | |  ||||||||||||| |||||||    
T  31756318 gaatcaacaaatattattaaacgtcatccccacaagtcgcaggaaatggacgaaacaatatacaaa 31756383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 4e-59; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 56 - 207
Target Start/End: Original strand, 31207011 - 31207162
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| | ||||| ||||| |||||||| |||||||||||    
T  31207011 aatcggcaaatattattaaacgccatcctcgcaagacgcaaggtatggacgaaacaagatacaaatggtgccgtatataaacggtacaccataaccacct 31207110  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31207111 aaaaacactcctgaagataaactcaccaaaacacatcaccacctaaaacaga 31207162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 56 - 205
Target Start/End: Original strand, 32065934 - 32066082
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| ||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||    
T  32065934 aatcggcaaatattattaaacgccatcaccgcaagatgcaaggtatggacgaaacaagatacaaatggtgccgcatatagacggtaca-cataaccacct 32066032  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  32066033 aaaaacacccctgaagataaacccaccaaaacacatcaccacctaaaaca 32066082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 56 - 205
Target Start/End: Complemental strand, 9519938 - 9519789
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||    
T  9519938 aatcgacaaatattattaaacaccatccctacaagacgcaaggtatggacgaaacaagatacaaatggtgccgcatatagacagtacatcataaccacct 9519839  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    |||||||| ||||| ||||||| |||||||||||  ||||||||||||||    
T  9519838 aaaaacacccctgatgataaacccaccaaaacacgtcaccacctaaaaca 9519789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 56 - 205
Target Start/End: Original strand, 12897925 - 12898074
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| |||||||||||||||| ||||||||||||| | ||| |||||||||||||||||||||| | |||||||||||||||||||| ||| |||||||    
T  12897925 aatcggcaaatattattaaacgtcatccccgcaagatgcaagatatggacgaaacaagatacaaatggtgccgcatatagacggtacaccattaccacct 12898024  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  12898025 aaaaacacccctgaagataaacccaccaaaacacatcaccacctaaaaca 12898074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 63 - 207
Target Start/End: Complemental strand, 20138851 - 20138707
Alignment:
Q  63 aaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaaca 162  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||||    
T  20138851 aaatattattaaacgccatccccgcaagacgcaaagtatggacgaaacaagatacaaatggtgccgcatatagatggtacaccataaccacctaaaaaca 20138752  T
Q  163 ctcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    | | || |||||||| |||||||||||| ||||||||||||||||    
T  20138751 cccatggagataaacccaccaaaacacatcaccacctaaaacaga 20138707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 56 - 205
Target Start/End: Complemental strand, 22774053 - 22773904
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | |||||||||||||||||||| |||||||| ||    
T  22774053 aatcggcaaatattattaaacgccatccccgcaagacgcaaggtatggacgaaactagatacaaatggtgccgcatatagacggtacaccataaccatct 22773954  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    ||||||||   ||||||||||| |||||||||| | ||||||||||||||    
T  22773953 aaaaacaccagtgaagataaacccaccaaaacatatcaccacctaaaaca 22773904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 63 - 207
Target Start/End: Complemental strand, 36631247 - 36631104
Alignment:
Q  63 aaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaaca 162  Q
    ||||||||||| |||||||||| |||||||| |||||||| | ||||||||||||||| | |||||||||||||||||||| ||||| ||||||||||||    
T  36631247 aaatattattatacgccatccctgcaagacgcaaggtatgaa-gaaacaagatacaaatggtgccgcatatagacggtacaccataatcacctaaaaaca 36631149  T
Q  163 ctcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    | ||||||||||||| |||||||||||| ||||||||||||||||    
T  36631148 cccctgaagataaacccaccaaaacacatcaccacctaaaacaga 36631104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 62 - 205
Target Start/End: Original strand, 24995050 - 24995193
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    ||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||| | |||||| ||||||| ||||| |||||||||||||||||    
T  24995050 caaatattattgaacgccatccccgtaagacgcaaggtatggacgaaacaagatacaaatggtgccgcttatagacagtacaccataaccacctaaaaac 24995149  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    || ||||||||||||| ||||||||||   ||||||||||||||    
T  24995150 acccctgaagataaacccaccaaaacatgtcaccacctaaaaca 24995193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 62 - 205
Target Start/End: Original strand, 37986510 - 37986653
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||| | ||||||||||||||| |||| | ||||||||||||||||||| | ||| |||||||||||||||| |||||||||||||||||    
T  37986510 caaatattattaaatgtcatccccgcaagacgcaaggcacggacgaaacaagatacaaatggtgctgcatatagacggtacaccataaccacctaaaaac 37986609  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    || ||| ||||||||| ||  |||||||| ||||||||||||||    
T  37986610 acccctaaagataaacccattaaaacacatcaccacctaaaaca 37986653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 62 - 203
Target Start/End: Original strand, 16457130 - 16457270
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||| ||||||||||||||||     
T  16457130 caaatattattaaacgtcatccctgcaagacgtaaggtatggacgaaacaagatacaaatggtgccacatatagacggtacaccataaccacctaaaaa- 16457228  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaaaa 203  Q
    |  | ||| ||||| | |||||||||||| ||||||||||||    
T  16457229 atccttgaggataatcgcaccaaaacacatcaccacctaaaa 16457270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 27889247 - 27889127
Alignment:
Q  87 caagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaacactcctgaagataaactcaccaaaa 186  Q
    ||||||| ||||||| |||||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||||| |||| |||||||| ||||||||    
T  27889247 caagacgcaaggtattgacgaaacaagatacaaatggtgccgcatatagactgtacaccataaccacctaaaaacacccctggagataaacccaccaaaa 27889148  T
Q  187 cacaacaccacctaaaacaga 207  Q
    |||| ||||||||||||||||    
T  27889147 cacatcaccacctaaaacaga 27889127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 27947905 - 27947785
Alignment:
Q  87 caagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaacactcctgaagataaactcaccaaaa 186  Q
    ||||||| ||||||| |||||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||||| |||| |||||||| ||||||||    
T  27947905 caagacgcaaggtattgacgaaacaagatacaaatggtgccgcatatagactgtacaccataaccacctaaaaacacccctggagataaacccaccaaaa 27947806  T
Q  187 cacaacaccacctaaaacaga 207  Q
    |||| ||||||||||||||||    
T  27947805 cacatcaccacctaaaacaga 27947785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 207
Target Start/End: Complemental strand, 35821685 - 35821537
Alignment:
Q  57 atcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccaccta 156  Q
    |||| ||||||||||||||||||||| |||||||||| |||| |||||||||||| |||||||| | |||||||||||||||||||| ||||||||| ||    
T  35821685 atcggcaaatattattaaacgccatctccgcaagacgcaagg-atggacgaaacatgatacaaatgatgccgcatatagacggtacaccataaccactta 35821587  T
Q  157 aaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    |||| ||  |||| ||||| |||||||||  ||| ||||||||||||||||    
T  35821586 aaaa-acctctgaggataatctcaccaaactacatcaccacctaaaacaga 35821537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 62 - 207
Target Start/End: Original strand, 15821032 - 15821176
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||| |||||  |||||||| |||||||||||| ||||||||||||| | |||||||||||||||||| | |||||||||| || ||     
T  15821032 caaatattattaaacgtcatcct-gcaagacgcaaggtatggacggaacaagatacaaatggtgccgcatatagacggtataccataaccaccaaataaa 15821130  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    || ||||||||||||  |||||||||||| |||||||||| |||||    
T  15821131 acccctgaagataaaaccaccaaaacacatcaccacctaagacaga 15821176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 62 - 207
Target Start/End: Original strand, 35815899 - 35816044
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||| | |||| ||||||||||||||| ||||||| || || ||     
T  35815899 caaatattattaaacgccatcctcgcaaaacgcaaggtatggacgaaacaagatacaaatggtgccacatatagacggtacaccataacccccaaacaaa 35815998  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
     | | ||||||||||| ||||||||| || |||||| ||| |||||    
T  35815999 gcccatgaagataaacccaccaaaacccatcaccacttaagacaga 35816044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 197
Target Start/End: Complemental strand, 3584164 - 3584028
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaa-gatacaaacgttgccgcatatagacggtacatcataaccacctaaaaa 160  Q
    |||||||||||||||||||||||| |||||||  ||||||| ||||||||| |||||||| | |||||||||||||||||||| |||||||||| || ||    
T  3584164 caaatattattaaacgccatccccacaagacgcgaggtatgaacgaaacaaagatacaaatggtgccgcatatagacggtacaccataaccaccaaacaa 3584065  T
Q  161 cactcctgaagataaactcaccaaaacacaacaccac 197  Q
      | ||| ||||||||| |||||| ||||| ||||||    
T  3584064 agccccttaagataaacccaccaacacacatcaccac 3584028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 56 - 201
Target Start/End: Original strand, 38577435 - 38577580
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    |||| ||||||||||||||||| |||  |||||||| |||| ||||| ||||||||| ||||||| | ||||||||||||||||||||  ||||| |||     
T  38577435 aatcaacaaatattattaaacgtcatttccgcaagatgtaatgtatgaacgaaacaatatacaaatgatgccgcatatagacggtacaaaataactacca 38577534  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaa 201  Q
    || || |  | ||||||||||| |||||||||||| ||||||||||    
T  38577535 aacaaaatacatgaagataaacccaccaaaacacatcaccacctaa 38577580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 13538411 - 13538324
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataa 149  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||| || ||||||| | | ||||||||||||||||||||||||    
T  13538411 caaatattattaaacgccatctccacaagacgcaaggtatggacgaaagaatatacaaatggtaccgcatatagacggtacatcataa 13538324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 13686063 - 13686150
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataa 149  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||| || ||||||| | | ||||||||||||||||||||||||    
T  13686063 caaatattattaaacgccatctccacaagacgcaaggtatggacgaaagaatatacaaatggtaccgcatatagacggtacatcataa 13686150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 34388711 - 34388805
Alignment:
Q  111 aagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    ||||||||||   ||| |||||||||||||||| ||||||||||||||||||| | ||||||||||| || ||||||||| ||||||||||||||    
T  34388711 aagatacaaatagtgctgcatatagacggtacaccataaccacctaaaaacacccgtgaagataaacccagcaaaacacatcaccacctaaaaca 34388805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 9659535 - 9659474
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagata 116  Q
    |||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  9659535 gaatcggcaaatattattaaacgtcatccccgcaagacgcaaggtatggacgaaacaagata 9659474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 207
Target Start/End: Original strand, 41893051 - 41893204
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgt---aaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataacc 151  Q
    ||||||||||||||||||||||| | |||||  |||| ||   |||||||| |||||| || ||||||| | || ||||||||||||||||| |||||||    
T  41893051 gaatcgacaaatattattaaacgtcgtccccataagatgtcacaaggtatgaacgaaaaaa-atacaaatggtgtcgcatatagacggtacaccataacc 41893149  T
Q  152 acctaaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    ||||||||| |  || || ||||||  |||||||||||| ||| ||||||||||||    
T  41893150 acctaaaaa-aaacccgaggataaatccaccaaaacacatcactacctaaaacaga 41893204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 37267964 - 37267882
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtaca 143  Q
    |||||||||||||||||||| |||||||||||||||| | |||||||| || ||||| | ||||     ||||||||||||||||||||    
T  37267964 gaatcgacaaatattattaa-cgccatccccgcaagatgcaaggtatgaacaaaacatgttaca-----tgccgcatatagacggtaca 37267882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 34866309 - 34866346
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacg 93  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  34866309 aatcggcaaatattattaaacgtcatccccgcaagacg 34866346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 41309933 - 41310002
Alignment:
Q  68 ttattaaacgccatccccgcaagacgtaaggtatggacga-aacaagatacaaacgttgccgcatataga 136  Q
    ||||||||||||| || ||||||||||||||||| || || |  |||||||||| | |||||||||||||    
T  41309933 ttattaaacgccaacctcgcaagacgtaaggtatagatgacataaagatacaaaagatgccgcatataga 41310002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 56 - 207
Target Start/End: Original strand, 30685573 - 30685724
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||| |||||| |||||||||||    
T  30685573 aatcggcaaatattattaaacgtcatccccgcaagacgcaaggtatggacgaaacaagatacaaatggtgccgcatatagatggtacaccataaccacct 30685672  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||||||    
T  30685673 aaaaacacccctgaagataaacccaccaaaacacatcaccacctaaaacaga 30685724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 63 - 207
Target Start/End: Original strand, 46814121 - 46814265
Alignment:
Q  63 aaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaaca 162  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||| || ||      
T  46814121 aaatattattaaacgccatcctcgcaagacgtaaggtatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataaccaccaaacaaag 46814220  T
Q  163 ctcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    | |||||||||||||  ||||||||||| |||||||||| |||||    
T  46814221 cccctgaagataaacctaccaaaacacatcaccacctaagacaga 46814265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 55 - 205
Target Start/End: Original strand, 31584688 - 31584837
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacc 154  Q
    |||||| ||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||||||| | ||||||||||||||| |||| ||||||||||    
T  31584688 gaatcggcaaatattattaaacaccatcctcgcaagacgcaaggtatg-acgaaacaagatacaaatggtgccgcatatagacgatacaccataaccacc 31584786  T
Q  155 taaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    ||||||||| ||||||||||||| ||||||||||   ||||||||||||||    
T  31584787 taaaaacacccctgaagataaacccaccaaaacatgtcaccacctaaaaca 31584837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 55 - 205
Target Start/End: Complemental strand, 41920890 - 41920740
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacc 154  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||| || |||||||   ||| |||||||||||||||| | ||||||||    
T  41920890 gaatcgacaaatattattaaacgtcatctccgcaagacgtaaggtatggacgaaataaaatacaaattgtgctgcatatagacggtacaccgtaaccacc 41920791  T
Q  155 taaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    ||||||||| | |||||||||||  ||||||| ||| ||||||||||||||    
T  41920790 taaaaacacccgtgaagataaaccaaccaaaatacaccaccacctaaaaca 41920740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 62 - 202
Target Start/End: Original strand, 24449586 - 24449725
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    ||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||| | ||| |||||||||||||||| ||||||||| |||||||    
T  24449586 caaatattattaaacgccatccc-gcaagatgcaaggtatggacgaaacaagatacaaatggtgctgcatatagacggtacaccataaccacataaaaac 24449684  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaaa 202  Q
    || |||  |||||||| |||||||||||| |||||||||||    
T  24449685 acccctagagataaacacaccaaaacacatcaccacctaaa 24449725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 55 - 205
Target Start/End: Original strand, 24684141 - 24684290
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacc 154  Q
    |||||| |||||||||||| | | |||||| |||||| | |||||||| || |||||||||||||| | |||| ||||||||||||||| ||||| ||||    
T  24684141 gaatcggcaaatattattatatgtcatccctgcaagatgcaaggtatgaac-aaacaagatacaaatggtgccacatatagacggtacaccataatcacc 24684239  T
Q  155 taaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    ||||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  24684240 taaaaacacccctgaagataaacccaccaaaacacatcaccacctaaaaca 24684290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 62 - 205
Target Start/End: Complemental strand, 5459581 - 5459443
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    ||||||||||||||||||     ||||| ||| |||||||||||||| ||| ||||||| | |||||||||||||||||||| ||||||||||||||||     
T  5459581 caaatattattaaacgcc-----cgcaatacgcaaggtatggacgaagcaacatacaaatggtgccgcatatagacggtacaccataaccacctaaaaat 5459487  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    || |||||||||||||||||||||||||| ||| || |||||||    
T  5459486 acccctgaagataaactcaccaaaacacatcactacttaaaaca 5459443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 56 - 203
Target Start/End: Complemental strand, 7002619 - 7002474
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| |||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||||||| |    
T  7002619 aatcggcaaatattattaaacgtcatcctcgcaaaatgtaaggtatggacgaaacaagatacaaaaggtgccgcatataaacggtacaccataaccactt 7002520  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaa 203  Q
    ||||| || |||  |||||||| |||||||||||| ||||||||||||    
T  7002519 aaaaa-ac-cctagagataaacccaccaaaacacatcaccacctaaaa 7002474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 190
Target Start/End: Original strand, 40216161 - 40216289
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||| ||||| |||||||||  || |||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  40216161 caaatattattaaacgtcatcctcgcaagacgccagatatggacgaatcaagatacaaatggtgccgcatatagacggtacatcataaccacctaaaaac 40216260  T
Q  162 actcctgaagataaactcaccaaaacaca 190  Q
    ||  ||| |||| ||| |||| |||||||    
T  40216261 acatctggagattaacccaccgaaacaca 40216289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 63 - 205
Target Start/End: Original strand, 5389084 - 5389221
Alignment:
Q  63 aaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaaca 162  Q
    |||||||||||||||||||||||     ||| ||||||||||||||| |||||||||| | |||||||||||||||| |||  |||||||||||||||||    
T  5389084 aaatattattaaacgccatcccc-----acgcaaggtatggacgaaataagatacaaatggtgccgcatatagacggcacactataaccacctaaaaaca 5389178  T
Q  163 ctcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    | |||  ||||||||  ||||||||||| ||||||||||||||    
T  5389179 cccctagagataaaccaaccaaaacacatcaccacctaaaaca 5389221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 63 - 200
Target Start/End: Complemental strand, 6804962 - 6804825
Alignment:
Q  63 aaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaaca 162  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||| | |||||||||||||||||||| |||||||||||||||| |    
T  6804962 aaatattattaaacgctatccccgcaagacgcaaggtatggacgaaa-aagatacaaatggtgccgcatatagacggtacaccataaccacctaaaaaaa 6804864  T
Q  163 ctcct-gaagataaactcaccaaaacacaacaccaccta 200  Q
      ||  || ||||| | |||||||||||| |||||||||    
T  6804863 aaccccgaggataatcccaccaaaacacatcaccaccta 6804825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 46692519 - 46692618
Alignment:
Q  107 aaacaagatacaaacgttgccgcatatagacggtacatcataaccacct-aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    |||||||||| ||| | ||||||||| |||||||||| ||||||||||| |||||||| ||||||||||||| | |||||||||| ||||||||||||||    
T  46692519 aaacaagataaaaatggtgccgcataaagacggtacaccataaccacctaaaaaacacccctgaagataaaccctccaaaacacatcaccacctaaaaca 46692618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 201
Target Start/End: Complemental strand, 24659345 - 24659217
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||| |||||||||||||||           |||||||||||||||| | |||||||||||||||||||| |||||||||| || ||     
T  24659345 caaatattattaaacgtcatccccgcaagacg-----------cgaaacaagatacaaatggtgccgcatatagacggtacaccataaccaccaaacaaa 24659257  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaa 201  Q
     | ||||||||||||| ||||||||||||  |||||||||    
T  24659256 gcccctgaagataaacccaccaaaacacataaccacctaa 24659217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 153
Target Start/End: Complemental strand, 14320755 - 14320658
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccac 153  Q
    ||||| |||||||||||||||| ||||||| ||||| | ||||||||||| |||| | ||||||| | || ||||||||||||||||| |||||||||    
T  14320755 aatcggcaaatattattaaacgtcatccccacaagatgcaaggtatggacaaaaccaaatacaaatggtgtcgcatatagacggtacaccataaccac 14320658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 27031496 - 27031585
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataacc 151  Q
    |||||||||||||||| ||||| ||||||||| ||| |||||||| ||||| ||| ||| | ||||||||||| |||||||| |||||||    
T  27031496 caaatattattaaacgtcatcctcgcaagacgcaagatatggacggaacaatatataaatggtgccgcatatatacggtacaccataacc 27031585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 6e-55; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 55 - 207
Target Start/End: Complemental strand, 30964870 - 30964718
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacc 154  Q
    |||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||| | ||  |||||||||||||||| ||||||||||    
T  30964870 gaatcgacaaatattattaaacaccatccctgcaagacgcaaggtatggacgaaacaagatacaaatgatgttgcatatagacggtacaccataaccacc 30964771  T
Q  155 taaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    |||||||||||||| |||||||| |||||||||||| ||||||||||||||||    
T  30964770 taaaaacactcctggagataaacccaccaaaacacatcaccacctaaaacaga 30964718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 56 - 207
Target Start/End: Complemental strand, 8255459 - 8255308
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| ||||||||||||||||| ||| ||||||||  |||||| ||||||| |||||||||||| | ||||||||||||||||||||||||||||||||    
T  8255459 aatcggcaaatattattaaacgctatctccgcaagatataaggtgtggacgagacaagatacaaatgatgccgcatatagacggtacatcataaccacct 8255360  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  8255359 aaaaacactcctgaagataaactcacaaaaacacatcaccacctaaaacaga 8255308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 56 - 207
Target Start/End: Complemental strand, 8268877 - 8268726
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| ||||||||||||||||| ||| ||||||||  |||||| ||||||| |||||||||||| | ||||||||||||||||||||||||||||||||    
T  8268877 aatcggcaaatattattaaacgctatctccgcaagatataaggtgtggacgagacaagatacaaatgatgccgcatatagacggtacatcataaccacct 8268778  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  8268777 aaaaacactcctgaagataaactcacaaaaacacatcaccacctaaaacaga 8268726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 56 - 205
Target Start/End: Original strand, 27555579 - 27555729
Alignment:
Q  56 aatcgacaaatattattaaacgccatcccc-gcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacc 154  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||   ||||||||||||| |||||| ||||||||||    
T  27555579 aatcggcaaatattattaaacgccatcccccgcaagacgcaaggtatggacgaaacaagatacaaattgtgccgcatatagatggtacaccataaccacc 27555678  T
Q  155 taaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    ||||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  27555679 taaaaacacccctgaagataaacccaccaaaacacatcaccacctaaaaca 27555729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 55 - 190
Target Start/End: Complemental strand, 35329440 - 35329305
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacc 154  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||| ||||||||||    
T  35329440 gaatcggcaaatattagtaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaatggtgctgcatatagacggtacaccataaccacc 35329341  T
Q  155 taaaaacactcctgaagataaactcaccaaaacaca 190  Q
    |||||| || | ||||||||||| ||||||||||||    
T  35329340 taaaaatacccatgaagataaacccaccaaaacaca 35329305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 56 - 205
Target Start/End: Original strand, 36689454 - 36689603
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||||||||||||||||||  ||||| ||||||||||  |||||||||||||| |||||||||| | |  |||||||||||||||||  |||||||| |    
T  36689454 aatcgacaaatattattaaataccatctccgcaagacgcgaggtatggacgaaataagatacaaatggtatcgcatatagacggtacactataaccactt 36689553  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    |||||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  36689554 aaaaacacccctgaagataaactcaccaaaacacatcaccatctaaaaca 36689603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 56 - 207
Target Start/End: Original strand, 30167212 - 30167365
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgc--cgcatatagacggtacatcataaccac 153  Q
    |||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||| | |||     ||||||||||||||  |||||||     
T  30167212 aatcgacaaatattattaaacgtcatcctcgcaagacgcaaggtatggacgaaacaagatacaaatgatgcaaaaaatatagacggtacactataaccat 30167311  T
Q  154 ctaaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    ||||||| ||  |||||||||||| |||||||||||| |||  |||||||||||    
T  30167312 ctaaaaataccactgaagataaacccaccaaaacacatcacatcctaaaacaga 30167365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 20465005 - 20464872
Alignment:
Q  72 taaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaacactcctgaag 171  Q
    |||||| ||||| | ||||| | |||||||| | ||||||||||||||| | ||||| |||||||||||||| ||||||||||||||||||| |||||||    
T  20465005 taaacgtcatcctcacaagatgcaaggtatgaaagaaacaagatacaaatggtgccgtatatagacggtacaccataaccacctaaaaacacccctgaag 20464906  T
Q  172 ataaactcaccaaaacacaacaccacctaaaaca 205  Q
    |||||| |||||| | ||| ||||||||||||||    
T  20464905 ataaacccaccaacatacatcaccacctaaaaca 20464872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 201
Target Start/End: Complemental strand, 4306137 - 4305994
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacc 154  Q
    |||||| |||||||||||||| | |||||||| |||||| |||||||| |||||| |||||| ||| | |||||||||||||||||||| ||||||||||    
T  4306137 gaatcggcaaatattattaaatgtcatccccggaagacgcaaggtatgaacgaaa-aagatataaatggtgccgcatatagacggtacaccataaccacc 4306039  T
Q  155 taaaaacactcctgaagataaactcaccaaaacacaacaccacctaa 201  Q
    |||||| | ||| || ||||| | |||||||||||| ||||||||||    
T  4306038 taaaaa-aatcc-gaggataatcccaccaaaacacatcaccacctaa 4305994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 56 - 157
Target Start/End: Complemental strand, 7703118 - 7703018
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| |||||||||||||||| ||||||||||||||  |||||||||| |||| |||||||||| | |||||||||||||||||||| |||||||||||    
T  7703118 aatcggcaaatattattaaacgtcatccccgcaagacacaaggtatggatgaaa-aagatacaaatggtgccgcatatagacggtacaccataaccacct 7703020  T
Q  156 aa 157  Q
    ||    
T  7703019 aa 7703018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 56 - 203
Target Start/End: Original strand, 8705789 - 8705932
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| |||||||||||||||| ||||||  |||||||  ||||||||||||  || |||||||| | ||| |||||||||||||||| |||||||||||    
T  8705789 aatcggcaaatattattaaacgtcatcccttcaagacgcgaggtatggacgaggcaggatacaaatggtgctgcatatagacggtacaccataaccacct 8705888  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaa 203  Q
    |||||||| | |||||||     ||| |||||||| ||||||||||||    
T  8705889 aaaaacacccttgaagat----ccacaaaaacacatcaccacctaaaa 8705932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 201
Target Start/End: Original strand, 31050316 - 31050453
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacc-taaaaa 160  Q
    |||||||||||||||| | ||||||||||| |  | ||||||||||||||||||||||| | || ||||||||||||||||| |||||||||| || ||     
T  31050316 caaatattattaaacgtcgtccccgcaagatgcgatgtatggacgaaacaagatacaaatgatgtcgcatatagacggtacaccataaccaccatacaag 31050415  T
Q  161 cactcctgaagataaactcaccaaaacacaacaccacctaa 201  Q
    ||  ||||||||| |||||| ||||||||| ||||||||||    
T  31050416 ca--cctgaagat-aactcatcaaaacacatcaccacctaa 31050453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 62 - 201
Target Start/End: Complemental strand, 2826207 - 2826071
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||| |||| | |||||||| |||||||||||| ||||||||||||| | ||||||||||| |||||||| ||||||| || || ||     
T  2826207 caaatattattaaacgtcatctctgcaagacgcaaggtatggacggaacaagatacaaatggtgccgcatatatacggtacaccataacccccaaacaaa 2826108  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaa 201  Q
    || ||||||||||| ||  |||||||||| || |||||||    
T  2826107 ac-cctgaagataacct--ccaaaacacatcatcacctaa 2826071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 139
Target Start/End: Complemental strand, 9750198 - 9750116
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacgg 139  Q
    |||||||||||||||||||||| |||||||||||||||  |||| |||||||||||||||||||| | ||||||||||||||||    
T  9750198 aatcgacaaatattattaaacgtcatccccgcaagacg-caggtttggacgaaacaagatacaaatggtgccgcatatagacgg 9750116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 46698434 - 46698525
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccac 153  Q
    |||||||||||||||| |||||  | |||||| ||||||||| |||||||||||||||| | |||||||||||||||||||| |||||||||    
T  46698434 caaatattattaaacgtcatccatgaaagacgcaaggtatggtcgaaacaagatacaaatggtgccgcatatagacggtacaccataaccac 46698525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 153
Target Start/End: Complemental strand, 49528512 - 49528421
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccac 153  Q
    ||||||| ||||||| ||| |||||||| || ||||||||||||||||||||||||||| | |||||||||||||||||||| || ||||||    
T  49528512 caaatatcattaaacaccaaccccgcaaaacataaggtatggacgaaacaagatacaaatggtgccgcatatagacggtacaccaaaaccac 49528421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 151
Target Start/End: Original strand, 35341000 - 35341097
Alignment:
Q  56 aatcgacaaatattattaaacgccatcccc--gcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataacc 151  Q
    |||| ||||||||||||||||| |||||||  |||||||| || ||||||||||||||||||||||| | |||| ||||||||||||||| |||||||    
T  35341000 aatcaacaaatattattaaacgtcatccccccgcaagacgcaatgtatggacgaaacaagatacaaatggtgccacatatagacggtacaccataacc 35341097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 57 - 190
Target Start/End: Original strand, 11281375 - 11281508
Alignment:
Q  57 atcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccaccta 156  Q
    |||| ||||||||||| |||| |||| || ||||||| ||| ||||||||||||| |||| ||| | ||| | |||||||||||| | ||||||||||||    
T  11281375 atcggcaaatattattgaacgtcatctccacaagacgcaagatatggacgaaacatgatataaatggtgctgtatatagacggtataccataaccaccta 11281474  T
Q  157 aaaacactcctgaagataaactcaccaaaacaca 190  Q
    |||||||  |||||||||| | ||| ||||||||    
T  11281475 aaaacacctctgaagataaccccactaaaacaca 11281508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 154
Target Start/End: Original strand, 52868766 - 52868859
Alignment:
Q  62 caaatattattaaa-cgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacc 154  Q
    |||||||||||||| || ||||  | |||||||||||||||| |||||  |||||||||| | || ||| ||||||||||||| ||||||||||    
T  52868766 caaatattattaaaacgtcatcttcacaagacgtaaggtatgaacgaattaagatacaaatggtgtcgcgtatagacggtacaccataaccacc 52868859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 4e-50; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 63 - 203
Target Start/End: Original strand, 2392159 - 2392299
Alignment:
Q  63 aaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaaca 162  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||    
T  2392159 aaatattattaaacgtcatccccgcaagacgcaaggtatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataaccacctaaaaaca 2392258  T
Q  163 ctcctgaagataaactcaccaaaacacaacaccacctaaaa 203  Q
    | |||||| |||||| |||||||||||| |||| |||||||    
T  2392259 cccctgaaaataaacccaccaaaacacatcaccgcctaaaa 2392299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 63 - 203
Target Start/End: Original strand, 2393922 - 2394062
Alignment:
Q  63 aaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaaca 162  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||    
T  2393922 aaatattattaaacgtcatccccgcaagacgcaaggtatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataaccacctaaaaaca 2394021  T
Q  163 ctcctgaagataaactcaccaaaacacaacaccacctaaaa 203  Q
    | |||||| |||||| |||||||||||| |||| |||||||    
T  2394022 cccctgaaaataaacccaccaaaacacatcaccgcctaaaa 2394062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 62 - 207
Target Start/End: Complemental strand, 47236124 - 47235979
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| | |||||||||||||||||| | |||||||| ||||||||    
T  47236124 caaatattattaaacgccatccctgcaagacgcaaggtatggacgaaacaagatacaaatggtgccgcatatagacggtataccataaccatctaaaaac 47236025  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    || |||| |||||||| |||||||| ||| ||||||||||||||||    
T  47236024 acccctggagataaacccaccaaaatacatcaccacctaaaacaga 47235979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 55 - 205
Target Start/End: Complemental strand, 31483313 - 31483163
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacc 154  Q
    |||||| ||||||||||||||| |||||||| ||||||| |||||||| || |||||||||||||| | ||| |||||||||||||||| ||||||||||    
T  31483313 gaatcggcaaatattattaaacaccatccccacaagacgcaaggtatgaacaaaacaagatacaaatggtgctgcatatagacggtacaccataaccacc 31483214  T
Q  155 taaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    ||||||||| |||| ||||||||||||||||||||| |||| |||||||||    
T  31483213 taaaaacacccctggagataaactcaccaaaacacatcaccgcctaaaaca 31483163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 55 - 207
Target Start/End: Original strand, 34475406 - 34475558
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacc 154  Q
    |||||| || ||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||| | |||| ||||||||||||| | ||||||||||    
T  34475406 gaatcggcacatattattaaacgtcatccccgcaagacgcagggtatgaacgaaacaagatacaaatggtgccccatatagacggtataccataaccacc 34475505  T
Q  155 taaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    ||| ||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  34475506 taagaacacccctggagataaactcaccaaaacacatcaccacctaaaacaga 34475558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 56 - 203
Target Start/End: Complemental strand, 45164285 - 45164139
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| |||||||||||||||   |||||||||||| | ||||||||||| |||||||||||||| | |||||||||||||||||||| |||||||||||    
T  45164285 aatcggcaaatattattaaacattatccccgcaagatgcaaggtatggactaaacaagatacaaatggtgccgcatatagacggtacaccataaccacct 45164186  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaa 203  Q
    |||||||| |||| |||||||| |||||||||||| ||||||||||||    
T  45164185 aaaaacac-cctggagataaacccaccaaaacacatcaccacctaaaa 45164139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 56 - 207
Target Start/End: Complemental strand, 19176938 - 19176787
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| |||||||||||||||| ||| || |||||||| || |||||||||||||| |||||||| | |||||||||||||||||||| |||||| ||||    
T  19176938 aatcggcaaatattattaaacgtcattcctgcaagacgcaaagtatggacgaaacatgatacaaatggtgccgcatatagacggtacaccataacgacct 19176839  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    ||||| || |||||||| |||| ||||||||||||  |||||||||||||||    
T  19176838 aaaaatacccctgaagacaaacccaccaaaacacataaccacctaaaacaga 19176787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 56 - 207
Target Start/End: Complemental strand, 53248332 - 53248181
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||| | || |||||||||   ||||| |||||||| ||    
T  53248332 aatcgacaaatattattaaacgtcatccccgcaaggcgtaaggtatggacaaaacaagatacaaatggtgtcgcatataggttgtacaccataaccatct 53248233  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    |||||||  ||||||||||| | ||| |||||||| ||||||||||||||||    
T  53248232 aaaaacaaccctgaagataaccccacaaaaacacatcaccacctaaaacaga 53248181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 56 - 201
Target Start/End: Complemental strand, 21343779 - 21343635
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    |||||||||||||||||||||| |||||| |||||||  |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  21343779 aatcgacaaatattattaaacgtcatcccggcaagacacaaggtatggacgaaacaagatacaaatggtgccgcatatagacggtacatcataaccacct 21343680  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaa 201  Q
    || |   | | ||||||| ||| |||||||||||| ||||||||||    
T  21343679 aacatggcccgtgaagat-aacccaccaaaacacatcaccacctaa 21343635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 30352115 - 30352230
Alignment:
Q  83 cccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaacactcctgaagataaactcacc 182  Q
    ||||||||||| |||||||||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||||| ||||||||||| | ||||    
T  30352115 cccgcaagacgcaaggtatggacgaaacaagatacaaatggtgccgcatatagaaggtacaccataaccacctaaaaacacccctgaagataagcccacc 30352214  T
Q  183 aaaacacaacaccacc 198  Q
    |||||||| |||||||    
T  30352215 aaaacacatcaccacc 30352230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 56 - 207
Target Start/End: Original strand, 40023218 - 40023369
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    |||| ||||||||||||||||  ||||||||||||||| |  ||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||     
T  40023218 aatcaacaaatattattaaacatcatccccgcaagacgcattgtatggacgaaacaagatacaaatgatgccgcatatagacggtacaccataaccacca 40023317  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    || ||  | ||||||||||||| || ||||||||| |||||||||| |||||    
T  40023318 aacaaagcccctgaagataaacccatcaaaacacatcaccacctaagacaga 40023369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 62 - 201
Target Start/End: Original strand, 50305229 - 50305368
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||| | || ||||||||||||||||| |||||||| | || ||     
T  50305229 caaatattattaaacgccattcccgcaagacgcaaggtatggacggaacaagatacaaatggtgtcgcatatagacggtacaccataaccatcaaataaa 50305328  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaa 201  Q
     | ||||||||||||| ||||||||||| |||||||||||    
T  50305329 gcccctgaagataaacccaccaaaacactacaccacctaa 50305368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 64 - 197
Target Start/End: Original strand, 9583710 - 9583843
Alignment:
Q  64 aatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaacac 163  Q
    ||||||||||||||||||| ||| |||||  ||||||| |||||||||||||||||| | ||||||||||||||| |||| |||||||||||||||| ||    
T  9583710 aatattattaaacgccatctccgtaagacacaaggtatagacgaaacaagatacaaatggtgccgcatatagacgatacaccataaccacctaaaaatac 9583809  T
Q  164 tcctgaagataaactcaccaaaacacaacaccac 197  Q
     | |||| |||||| |||||||||||| ||||||    
T  9583810 ccttgaaaataaacccaccaaaacacatcaccac 9583843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 43012779 - 43012658
Alignment:
Q  86 gcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaacactcctgaagataaactcaccaaa 185  Q
    |||||||| |||||||| ||||||||| ||||||| | ||||||||||||||| |||| |||||||||||||||||||||||||||| |||| |||||||    
T  43012779 gcaagacgcaaggtatgaacgaaacaatatacaaatggtgccgcatatagacgatacaccataaccacctaaaaacactcctgaagaaaaacccaccaaa 43012680  T
Q  186 acacaacaccacctaaaacaga 207  Q
    | ||| ||||| ||||||||||    
T  43012679 agacatcaccatctaaaacaga 43012658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 63 - 203
Target Start/End: Complemental strand, 17551382 - 17551242
Alignment:
Q  63 aaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaaca 162  Q
    |||||||||||||||  ||||| |||||| | | |||||| ||||||||| ||||||| | |||||||||||||| ||||| ||||||||||||||||||    
T  17551382 aaatattattaaacgttatccctgcaagatgcagggtatgaacgaaacaaaatacaaatggtgccgcatatagactgtacaccataaccacctaaaaaca 17551283  T
Q  163 ctcctgaagataaactcaccaaaacacaacaccacctaaaa 203  Q
    |  ||||| | |||| |||||||||||| ||||||||||||    
T  17551282 cctctgaaaaaaaacccaccaaaacacatcaccacctaaaa 17551242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 154
Target Start/End: Complemental strand, 45399211 - 45399119
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacc 154  Q
    |||||||||||||||| |||| ||| ||||||  ||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  45399211 caaatattattaaacgacatctccgaaagacgcgaggtatgaacgaaacaagatacaaacggtgccgcatatagacggtacaccataaccacc 45399119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 62 - 154
Target Start/End: Original strand, 23328003 - 23328095
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacc 154  Q
    ||||||||||||||||| ||||| |||| ||| |||||||||||||||||||||| ||| | ||||||||||| |||||||| ||||||||||    
T  23328003 caaatattattaaacgctatccctgcaatacgcaaggtatggacgaaacaagatataaatggtgccgcatatatacggtacaccataaccacc 23328095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 50560077 - 50559978
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacc 154  Q
    ||||| ||||||||||||||||| ||||| ||||| ||| ||| |||||||||||||||||||||| | ||||||| ||||||||| || ||||||||||    
T  50560077 gaatcaacaaatattattaaacgtcatcctcgcaatacgcaagatatggacgaaacaagatacaaaagatgccgcacatagacggtgcaccataaccacc 50559978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 174
Target Start/End: Complemental strand, 37158731 - 37158618
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatat-agacggt-acatcataaccacctaaaa 159  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||| | |||||||||| | | ||| |||  ||||||||||||||    
T  37158731 caaatattat-aaacgccatccccgcaagacgcaaggtatggacgaaacaggatacaaatggtgccgcatataatatggtaacactataaccacctaaaa 37158633  T
Q  160 acactcctgaagata 174  Q
    |||| ||||||||||    
T  37158632 acacccctgaagata 37158618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 151
Target Start/End: Original strand, 25506719 - 25506814
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataacc 151  Q
    |||||||||||||||||||||  ||||||||||||||  ||| |||  || |||||| ||||||| | |||||||||||||||||||| |||||||    
T  25506719 aatcgacaaatattattaaacatcatccccgcaagacccaagatataaacaaaacaatatacaaatggtgccgcatatagacggtacaccataacc 25506814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 153
Target Start/End: Original strand, 4463734 - 4463831
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccac 153  Q
    ||||| |||||||||||||||| || |||| ||||||| |||  ||||||||||||| | ||||| | ||||||||||||||||| || |||||||||    
T  4463734 aatcggcaaatattattaaacgtcaaccccacaagacgcaagacatggacgaaacaacacacaaatggtgccgcatatagacggtgcaccataaccac 4463831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 47439347 - 47439284
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaa 119  Q
    ||||| ||||||||| |||||| ||||||  |||||| ||||||||||||||||||||||||||    
T  47439347 aatcggcaaatattactaaacgtcatccctacaagacataaggtatggacgaaacaagatacaa 47439284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 39020990 - 39021046
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaa 112  Q
    ||||| |||||||||||||||||| ||||| |||||||||||| ||||||| ||||||    
T  39020990 gaatcaacaaatattattaaacgc-atccctgcaagacgtaagatatggaccaaacaa 39021046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 5557012 - 5556947
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaa 120  Q
    |||||| |||||||||||||||| |||  ||| | || ||||||| || |||||||||||||||||    
T  5557012 gaatcggcaaatattattaaacgtcatttccgtaggatgtaaggtttgaacgaaacaagatacaaa 5556947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 56 - 205
Target Start/End: Complemental strand, 34378531 - 34378382
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||||||||||||||||||||||||| |||||||||| |||| |||||||| || ||||||||| | |||||||||||||||||||| |||||||| ||    
T  34378531 aatcgacaaatattattaaacgccatctccgcaagacgcaaggcatggacgagacgagatacaaatggtgccgcatatagacggtacaccataaccatct 34378432  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    |||||||| ||||||||||||| ||| |||||||| ||||||||||||||    
T  34378431 aaaaacacccctgaagataaacccacaaaaacacatcaccacctaaaaca 34378382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 55 - 201
Target Start/End: Complemental strand, 18593675 - 18593529
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacc 154  Q
    |||||| |||||||||||||||| ||||||||||||| | |||||||||||||||||||||| | | | |||||||||||||||||||| ||||||||||    
T  18593675 gaatcggcaaatattattaaacgtcatccccgcaagatgcaaggtatggacgaaacaagataaatatggtgccgcatatagacggtacaccataaccacc 18593576  T
Q  155 taaaaacactcctgaagataaactcaccaaaacacaacaccacctaa 201  Q
    ||||||||| ||||||||||||| | |||||||||| ||||||||||    
T  18593575 taaaaacacccctgaagataaacccgccaaaacacatcaccacctaa 18593529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 63 - 204
Target Start/End: Original strand, 5656749 - 5656890
Alignment:
Q  63 aaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaaca 162  Q
    |||||||||||||||||||| |||||||||| |||||||| |||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||    
T  5656749 aaatattattaaacgccatcaccgcaagacgcaaggtatgaacgaaataagatacaaatgatgccgcatatagacggtacatgataaccacctaaaaaca 5656848  T
Q  163 ctcctgaagataaactcaccaaaacacaacaccacctaaaac 204  Q
    | ||| ||||||||  |||||||||||  |||||||||||||    
T  5656849 caccttaagataaatccaccaaaacacgccaccacctaaaac 5656890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 95 - 207
Target Start/End: Complemental strand, 29087871 - 29087759
Alignment:
Q  95 aaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaacactcctgaagataaactcaccaaaacacaacac 194  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||| ||     
T  29087871 aaggtatggacgaaacaagatacaaatggtgccgcatatagacggtacatcataaccacctaaaaacaaccctgaagataaacccaccaaaacacatcag 29087772  T
Q  195 cacctaaaacaga 207  Q
    |||||||||||||    
T  29087771 cacctaaaacaga 29087759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 55 - 207
Target Start/End: Original strand, 7161662 - 7161814
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacc 154  Q
    |||||| |||||||||||||||| | ||||| ||||||| ||| ||||||||||| ||||||||||   ||  |||||||||||||||| ||||| ||||    
T  7161662 gaatcggcaaatattattaaacgtcttccccacaagacgcaagatatggacgaaataagatacaaatagtgtagcatatagacggtacaccataatcacc 7161761  T
Q  155 taaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    ||||||||| |||||| |||||| |||||||||||| ||| ||||||||||||    
T  7161762 taaaaacacccctgaatataaacccaccaaaacacatcactacctaaaacaga 7161814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 62 - 197
Target Start/End: Complemental strand, 698793 - 698658
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||| |||| | ||||||||||||||||||| |||| | |||||||| | ||||||||||||||||||||  ||||||||||||||||    
T  698793 caaatattattaaacgacatctctgcaagacgtaaggtatggatgaaatatgatacaaatggtgccgcatatagacggtacactataaccacctaaaaac 698694  T
Q  162 actcctgaagataaactcaccaaaacacaacaccac 197  Q
    || | |||||||||||  |||||| |||| ||||||    
T  698693 acccttgaagataaacctaccaaaccacatcaccac 698658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 56 - 163
Target Start/End: Complemental strand, 7453020 - 7452913
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| |||||||||||||||  |||||  |||||||| ||||||||||| || ||||||||||| | |||||||||||||||||||| |||||||||||    
T  7453020 aatcggcaaatattattaaacatcatccatgcaagacgcaaggtatggacaaatcaagatacaaatggtgccgcatatagacggtacaccataaccacct 7452921  T
Q  156 aaaaacac 163  Q
    ||||||||    
T  7452920 aaaaacac 7452913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 18255098 - 18255192
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataa 149  Q
    |||||| |||||||| |||||||  ||||||| |||| | | ||||| ||||||||||||||||||   ||||||||||||||||||||||||||    
T  18255098 gaatcggcaaatattgttaaacgttatccccgtaagatgcagggtatagacgaaacaagatacaaatagtgccgcatatagacggtacatcataa 18255192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 207
Target Start/End: Original strand, 18313310 - 18313444
Alignment:
Q  63 aaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaaca 162  Q
    ||||||||||||||| ||| || | |||||| |||||||||| |||||||||| |||| | ||||||||||||||||||||          | |||||||    
T  18313310 aaatattattaaacgtcattcctgtaagacgcaaggtatggatgaaacaagatgcaaatggtgccgcatatagacggtaca----------ccaaaaaca 18313399  T
Q  163 ctcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    | |  | |||||||| |||||||||||| ||||||||||||||||    
T  18313400 ccctcggagataaacccaccaaaacacatcaccacctaaaacaga 18313444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 41250893 - 41250944
Alignment:
Q  107 aaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaa 158  Q
    |||||||||| ||| | |||||||||||||||||||| ||||||||| ||||    
T  41250893 aaacaagatataaatggtgccgcatatagacggtacaccataaccacgtaaa 41250944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 4e-47; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 56 - 207
Target Start/End: Complemental strand, 387608 - 387457
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    |||||||| ||||||||||||| |||| ||||||| || | |||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| |    
T  387608 aatcgacagatattattaaacgtcatcaccgcaagtcgcagggtatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataaccactt 387509  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    |||||||| | ||||||||||| |||||||||||| ||||||||||||||||    
T  387508 aaaaacacccatgaagataaacccaccaaaacacatcaccacctaaaacaga 387457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 56 - 207
Target Start/End: Original strand, 39338510 - 39338662
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| |||||||||||||||||||||  || |||||| || ||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||    
T  39338510 aatcggcaaatattattaaacgccatcatcgtaagacgcaatgtatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataaccacct 39338609  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaaca-ccacctaaaacaga 207  Q
     ||||||| ||||||||||||| |||||||||||| || ||||||||||||||    
T  39338610 gaaaacacccctgaagataaacccaccaaaacacatcacccacctaaaacaga 39338662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 56 - 189
Target Start/End: Complemental strand, 10524529 - 10524397
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| ||||||||||||||||||| ||| |||||||| |||||||||||||||||| ||||||| | ||| ||||||||| |||||| |||||||||||    
T  10524529 aatcggcaaatattattaaacgcca-ccctgcaagacgcaaggtatggacgaaacaatatacaaatggtgcagcatatagatggtacaccataaccacct 10524431  T
Q  156 aaaaacactcctgaagataaactcaccaaaacac 189  Q
    |||||||| ||||||||||||| |||||||||||    
T  10524430 aaaaacacccctgaagataaacccaccaaaacac 10524397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 56 - 205
Target Start/End: Original strand, 41877201 - 41877350
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    |||| |||||||||||||||| |||||||||||||||| ||| |||||||||||||| ||||||| | | ||| |||||||||||||| |||||||||||    
T  41877201 aatcaacaaatattattaaactccatccccgcaagacgcaagatatggacgaaacaatatacaaatggtaccgtatatagacggtacaccataaccacct 41877300  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
     ||||||| ||||||||||||| | | |||||||| |||  |||||||||    
T  41877301 gaaaacacccctgaagataaaccctctaaaacacatcactgcctaaaaca 41877350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 62 - 201
Target Start/End: Complemental strand, 5254678 - 5254540
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||| | |||||||| | |||||||||||||||||||| ||||||| || || ||     
T  5254678 caaatattattaaacgtcatcctcgcaagacgtaaggtatggacgaaata-gatacaaatggtgccgcatatagacggtacaccataacctccaaacaaa 5254580  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaa 201  Q
     ||| ||||||||||| |||||||||||| ||||||||||    
T  5254579 gctcatgaagataaacccaccaaaacacatcaccacctaa 5254540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 62 - 201
Target Start/End: Original strand, 14436922 - 14437059
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||| |||||| ||| ||| |     
T  14436922 caaatattattaaacgccatccccgcaagacgcaaggtatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataacaacc-aaacaa 14437020  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaa 201  Q
     ||||||||||| ||| ||||||| |||| || |||||||    
T  14437021 gctcctgaagat-aacccaccaaatcacatcatcacctaa 14437059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 201
Target Start/End: Original strand, 14106178 - 14106314
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||||||||| ||||||||| | |||||| ||||||||||||| ||| | |||||||||||||||||||| |||||||||| ||| |     
T  14106178 caaatattattaaacgccatcctcgcaagacgcagggtatg-acgaaacaagatagaaatggtgccgcatatagacggtacaccataaccacc-aaacaa 14106275  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaa 201  Q
     | ||||||||| ||| |||||||||||||||||||||||    
T  14106276 gcccctgaagat-aacccaccaaaacacaacaccacctaa 14106314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 22888552 - 22888692
Alignment:
Q  66 tattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaacactc 165  Q
    |||||||||| | |||||| |||||||| || ||||||| |||||||| || ||| | |||| ||||||||||||| |||||||||| |||| ||||| |    
T  22888552 tattattaaatgtcatccc-gcaagacgcaatgtatggatgaaacaaggtagaaatggtgccacatatagacggtatatcataaccaactaagaacaccc 22888650  T
Q  166 ctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    |||||||||||| ||||||||| || ||||||||||||||||    
T  22888651 ctgaagataaacccaccaaaacgcatcaccacctaaaacaga 22888692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 13512487 - 13512584
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataacca 152  Q
    ||||||| ||||||||||||||| ||| ||||||||||| || ||||||||||||||| ||||||| | |||||||||||||||||||| ||||||||    
T  13512487 gaatcgaaaaatattattaaacgtcattcccgcaagacgcaatgtatggacgaaacaaaatacaaatgatgccgcatatagacggtacaacataacca 13512584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 201
Target Start/End: Complemental strand, 14405624 - 14405487
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    ||||||||||||||||  || || ||||||||||||||||| ||||| ||||||||||| | ||| |||||||||||||||| ||||||||||||| ||     
T  14405624 caaatattattaaacgttattcctgcaagacgtaaggtatgaacgaa-caagatacaaatggtgctgcatatagacggtacaccataaccacctaacaaa 14405526  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaa 201  Q
     | ||| ||||||| || ||||||||||| ||||||||||    
T  14405525 gcccctaaagataacct-accaaaacacatcaccacctaa 14405487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 3745774 - 3745676
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccac 153  Q
    |||||| |||||||||||||| | |||||||  |||||| |||||||||||||||||||||||||| | ||| ||||||||| ||||||||||||||||    
T  3745774 gaatcggcaaatattattaaatgtcatccccataagacgcaaggtatggacgaaacaagatacaaatggtgctgcatatagatggtacatcataaccac 3745676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 43816095 - 43816191
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataacc 151  Q
    |||||| |||||||||||||||| ||| ||||||| ||| ||||||||||||||||||  |||||| | |||||||||||||||||||| |||||||    
T  43816095 gaatcggcaaatattattaaacgtcattcccgcaaaacgcaaggtatggacgaaacaaagtacaaatgatgccgcatatagacggtacaccataacc 43816191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 154
Target Start/End: Original strand, 17116553 - 17116635
Alignment:
Q  72 taaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacc 154  Q
    |||||| ||||||||||||||| ||||||||||||| |||||||||||| | ||||||||||||||||||||  |||||||||    
T  17116553 taaacgtcatccccgcaagacgcaaggtatggacgagacaagatacaaatgatgccgcatatagacggtacactataaccacc 17116635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 7874703 - 7874582
Alignment:
Q  62 caaatattattaaa-cgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaa 160  Q
    |||||||||||||| |||||||| ||||||||  ||||||| ||| |||||||||||||| |  ||||||||||||||||||| |||||||||| || ||    
T  7874703 caaatattattaaaacgccatcctcgcaagacacaaggtatagacaaaacaagatacaaatggcgccgcatatagacggtacaccataaccaccaaacaa 7874604  T
Q  161 cactcctgaagataaactcacc 182  Q
      | |||||| |||||||||||    
T  7874603 agcccctgaatataaactcacc 7874582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 43248882 - 43248971
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataacc 151  Q
    |||||||||||||||| ||||| | ||||||  |||||||||||||||||||||| ||| |  ||||||||||||||||| |||||||||    
T  43248882 caaatattattaaacgtcatcctcacaagacacaaggtatggacgaaacaagatataaatggcgccgcatatagacggtatatcataacc 43248971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 45311452 - 45311550
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccac 153  Q
    |||||| | ||||||||||||||||| |||||||||| | |||| | ||||||||||||||||||| | |||| |||||| |||| ||| |||||||||    
T  45311452 gaatcggccaatattattaaacgccaaccccgcaagatgcaaggaaaggacgaaacaagatacaaatggtgccacatatatacggaacaccataaccac 45311550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 15457893 - 15457817
Alignment:
Q  57 atcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatat 133  Q
    |||| |||||| ||||||||| ||||||||||||||| | | |||||||||||||||||||||| | ||||||||||    
T  15457893 atcggcaaataatattaaacgtcatccccgcaagacgcatgatatggacgaaacaagatacaaatggtgccgcatat 15457817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 201
Target Start/End: Complemental strand, 7461101 - 7460965
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||| ||||||||||||||| |  |||| |||||||||| ||||||| | ||  |||||||||| ||||| |||||||||| ||| |     
T  7461101 caaatattattaaacgtcatccccgcaagacgcagagtat-gacgaaacaaaatacaaatggtgttgcatatagacagtacaccataaccacc-aaacaa 7461004  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaa 201  Q
     | ||||||||| ||| ||||||| ||||||||| |||||    
T  7461003 gcccctgaagat-aacccaccaaatcacaacaccgcctaa 7460965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 9823761 - 9823697
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaa 120  Q
    ||||| ||||||||||||||||||||| |||||||||  |||||||| | |||||||||||||||    
T  9823761 aatcggcaaatattattaaacgccatctccgcaagacacaaggtatgaatgaaacaagatacaaa 9823697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 25280971 - 25281024
Alignment:
Q  63 aaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagata 116  Q
    ||||||||||||||| ||||||| ||||||| | ||||||||||||||||||||    
T  25280971 aaatattattaaacgtcatccccacaagacgcagggtatggacgaaacaagata 25281024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 139
Target Start/End: Complemental strand, 7455676 - 7455601
Alignment:
Q  63 aaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacgg 139  Q
    ||||| ||||||||| |||||||||||||||  ||||||| |||||| |||||||||| | ||||||| ||||||||    
T  7455676 aaataatattaaacgtcatccccgcaagacg-caggtatgaacgaaataagatacaaatggtgccgcaaatagacgg 7455601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 25281030 - 25281095
Alignment:
Q  138 ggtacatcataaccacctaaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaa 203  Q
    |||||| ||||||||||||||||||| |  ||| ||||||| ||||||||||  ||||||||||||    
T  25281030 ggtacaccataaccacctaaaaacaccctcgaaaataaactaaccaaaacacgtcaccacctaaaa 25281095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 25281085 - 25281143
Alignment:
Q  149 accacctaaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    ||||||||||||||| |  ||| ||||||| ||||||||||  ||||||||||||||||    
T  25281085 accacctaaaaacaccctcgaaaataaactaaccaaaacacgtcaccacctaaaacaga 25281143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 9e-45; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 56 - 207
Target Start/End: Complemental strand, 3254389 - 3254238
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| | ||||| |||||||  ||||| |||| ||||||    
T  3254389 aatcggcaaatattattaaacgtcatccccgcaagacgcaaggtatggacgaaacaagatacaaatggtgccgtatatagatagtacaccatagccacct 3254290  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    |||||||| |||||| |||||| |||||||| ||| ||||||||||||||||    
T  3254289 aaaaacacccctgaaaataaacccaccaaaatacatcaccacctaaaacaga 3254238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 56 - 207
Target Start/End: Complemental strand, 15944431 - 15944280
Alignment:
Q  56 aatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacct 155  Q
    ||||| ||||||||||||||||||||||| | |||||| |||||||||||  || |||||||||| | || ||||||||||||||||| ||||| |||||    
T  15944431 aatcggcaaatattattaaacgccatccctgtaagacgcaaggtatggacagaagaagatacaaatggtgtcgcatatagacggtacaccataaacacct 15944332  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    ||||| || |||||| |||||| |||||||||||| ||||||||||||||||    
T  15944331 aaaaatacccctgaatataaacccaccaaaacacatcaccacctaaaacaga 15944280  T

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Target: chr6; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 62 - 205
Target Start/End: Complemental strand, 3117920 - 3117777
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||| ||| || |||||||||||||||||||||||| |||||||||| | ||| ||||||||||| |||| |||||||||||||||||    
T  3117920 caaatattattaaacgtcattcctgcaagacgtaaggtatggacgaaataagatacaaatggtgcagcatatagacgctacaccataaccacctaaaaac 3117821  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    ||  |  |||||||||  |||||| |||| ||||||||||||||    
T  3117820 acctccaaagataaacctaccaaaccacatcaccacctaaaaca 3117777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 63 - 205
Target Start/End: Complemental strand, 10542255 - 10542114
Alignment:
Q  63 aaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaaca 162  Q
    |||||||||||| ||||||||| |||||| | ||| |||| ||||||||||||||||| | ||||||||||||||| |||| ||||||||||||||||||    
T  10542255 aaatattattaagcgccatccc-gcaagatgcaagatatgaacgaaacaagatacaaaaggtgccgcatatagacgatacaccataaccacctaaaaaca 10542157  T
Q  163 ctcctgaagataaactcaccaaaacacaacaccacctaaaaca 205  Q
    | ||||||||||||| || ||||  ||| ||||||||||||||    
T  10542156 cccctgaagataaacccatcaaattacaccaccacctaaaaca 10542114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 15132495 - 15132573
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggt 140  Q
    |||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||| | ||||| |||||||||||    
T  15132495 caaatattattaaacgccatcatcgcaagacgtaaggtatggacaaaacaagatacaaatgatgccgtatatagacggt 15132573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 33697789 - 33697843
Alignment:
Q  99 tatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccac 153  Q
    |||||||||||||||||||||| | |||||||||||||||||||| |||||||||    
T  33697789 tatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataaccac 33697843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 14663414 - 14663361
Alignment:
Q  154 ctaaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    |||||||||| |||| |||||||| ||| |||||||| ||||||||||||||||    
T  14663414 ctaaaaacacccctggagataaacccacgaaaacacatcaccacctaaaacaga 14663361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 14663479 - 14663414
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgc 129  Q
    |||||||||||||||| |||||  |||||||| |||||||||||| ||||||||||||| | ||||||    
T  14663479 caaatattattaaacgtcatcct-gcaagacgaaaggtatggacg-aacaagatacaaatgctgccgc 14663414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 57 - 207
Target Start/End: Complemental strand, 19349 - 19199
Alignment:
Q  57 atcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataa-ccacct 155  Q
    |||| |||||||||||||||| ||||| ||||||||| | |||||||||||||||||||||||| | |||||||||||||||||||| ||||| ||||||    
T  19349 atcggcaaatattattaaacgtcatcctcgcaagacgcatggtatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataacccacct 19250  T
Q  156 aaaaacactcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    ||||| | | |||||||||||| |||||||| ||| ||||||||||||||||    
T  19249 aaaaaaaat-ctgaagataaacccaccaaaatacatcaccacctaaaacaga 19199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 79 - 205
Target Start/End: Original strand, 2345 - 2471
Alignment:
Q  79 catccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaacactcctgaagataaact 178  Q
    ||||||| ||||||| |||||||||||||||||||||||| | | |||||||||||||||||||| ||||||||||||||||||| | |||||||||||     
T  2345 catccccacaagacgcaaggtatggacgaaacaagatacagatggtgccgcatatagacggtacaccataaccacctaaaaacacccttgaagataaacc 2444  T
Q  179 caccaaaacacaacaccacctaaaaca 205  Q
    ||||||| |||| ||||||||||||||    
T  2445 caccaaaccacatcaccacctaaaaca 2471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 62 - 203
Target Start/End: Complemental strand, 6131 - 5989
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    |||||||||||||||| ||||||||||||||| ||| |||| |||| |||||||||||| | ||||| ||||||||| ||||||||||||||||||||||    
T  6131 caaatattattaaacgtcatccccgcaagacgcaagatatgaacgagacaagatacaaatggtgccgtatatagacgttacatcataaccacctaaaaac 6032  T
Q  162 actcctgaagataaa-ctcaccaaaacacaacaccacctaaaa 203  Q
    ||  ||||||||||| | ||| |||||||| ||||||||||||    
T  6031 acctctgaagataaaccccacaaaaacacatcaccacctaaaa 5989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 62 - 207
Target Start/End: Complemental strand, 48761 - 48616
Alignment:
Q  62 caaatattattaaacgccatccccgcaagacgtaaggtatggacgaaacaagatacaaacgttgccgcatatagacggtacatcataaccacctaaaaac 161  Q
    ||||||||||| |||| | ||||||||||||  ||| ||||||| |||||||||||||| | |||||||||||||||||||| |||||||||||||||||    
T  48761 caaatattattcaacgtcctccccgcaagacacaagatatggactaaacaagatacaaatggtgccgcatatagacggtacaccataaccacctaaaaac 48662  T
Q  162 actcctgaagataaactcaccaaaacacaacaccacctaaaacaga 207  Q
    || | | ||||||| |  ||||||||||| || |||||||||||||    
T  48661 acccttaaagataatcctaccaaaacacatcatcacctaaaacaga 48616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 35472 - 35526
Alignment:
Q  55 gaatcgacaaatattattaaacgccatccccgcaagacgtaaggtatggacgaaa 109  Q
    |||||| ||||||||||| |||| |||||||| ||||||||||||||||||||||    
T  35472 gaatcggcaaatattattgaacgtcatccccgtaagacgtaaggtatggacgaaa 35526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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