View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20244_low_23 (Length: 238)
Name: NF20244_low_23
Description: NF20244
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20244_low_23 |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 40058320 - 40058097
Alignment:
| Q |
1 |
atgaatagattcacttacactaaatttggtatgaagacacctagaagagatgtgtttggtcatgctccaaaccttaaaaatatgagagtttttggttgtg |
100 |
Q |
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| T |
40058320 |
atgaatagattcacttacactaaatttggtatgaagacac-tagaagagatgtggttggtcatgctccaaaccttaaaaatatgagagtttttggttgtg |
40058222 |
T |
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| Q |
101 |
tcccctatatgcacatataaaacggacaatcttaaatcaagggttgaaattgtatgtttttgaggtatcattaaggtgtaaaagagtacaaatatggtgc |
200 |
Q |
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| T |
40058221 |
tcccctatatgcacatataaaacggacaatcttaaatcaagggttgaaattgtatgtttttgaggtatcattaaggtgtaaaagagtacaaatatggtgc |
40058122 |
T |
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| Q |
201 |
atggagaaaggggagacttaggtat |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
40058121 |
atggagaaaggggagacttaggtat |
40058097 |
T |
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