View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20246_low_12 (Length: 292)
Name: NF20246_low_12
Description: NF20246
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20246_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 15 - 281
Target Start/End: Original strand, 31847408 - 31847674
Alignment:
| Q |
15 |
aggaggaactgaaattagagtgtggataatacaagggagaacgagaaacaagttttagtagaaaaaggataatcaaaaacaatttcatctgatcaatatt |
114 |
Q |
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| T |
31847408 |
aggaggaactgaaattagagtgtggataatacaagggagaacgagaaacaagttttagtagaaaaaggataatcaaaaacaatttcatctgatcaatatt |
31847507 |
T |
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| Q |
115 |
ttaaagagcttggaattcaggtatttgcctctttaatatgctcaaatattacaatatgtgaaatttttgtttgcttatggctaaagatatgcttttagtc |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31847508 |
ttaaagagcttggaattcaggtatttgcctctttaatatgctcaaatattacaatatgtgaaatttttgtttgcttatggctaaagatatgcttttagtc |
31847607 |
T |
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| Q |
215 |
ctgtttttccaatgtttatgactagtagcgtgtcatcaactcatccttaatgtgtgaaaccattcat |
281 |
Q |
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| T |
31847608 |
ctgtttttccaatgtttatgactagtagcgtgtcatcaactcatccataatgtgtgaaactattcat |
31847674 |
T |
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