View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20246_low_14 (Length: 261)
Name: NF20246_low_14
Description: NF20246
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20246_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 406514 - 406277
Alignment:
| Q |
9 |
agcagagaatagtttgactacaaaaggcttcattattaagaggctgacatcctttgttgcaatttgtaagtagctgtaattatgaacgtgactaattcta |
108 |
Q |
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| T |
406514 |
agcaaagaatagtttgactacaaaaggcttcattattaagaggctgacatcctttgttgcaatttgtaagtagctgtaattatgaacgtgactaattcta |
406415 |
T |
|
| Q |
109 |
ggcttcagcatttgattattaatgaaatttgctttaatttaaaaatttggcttaatctttttccgttccttgattatctgatactaatatctttgcattg |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
406414 |
ggcttcagcatttgattattaatgaaatttgctttaatttaaaaatttggcttaatctttttccgttccttgattatccgatactaatatctttgcattg |
406315 |
T |
|
| Q |
209 |
ttatgaacttttaattattaatatgatgtagtaccttg |
246 |
Q |
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|||||||||||||||| ||||||||||||||||||||| |
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| T |
406314 |
ttatgaacttttaattcttaatatgatgtagtaccttg |
406277 |
T |
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