View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20246_low_19 (Length: 203)
Name: NF20246_low_19
Description: NF20246
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20246_low_19 |
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Alignment Details
Target: chr4 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 52558292 - 52558124
Alignment:
| Q |
18 |
atgaaacgataaatatataatgattgtaatatttacgatgatgaagtaggctacgtatggggtttgtaaatcactcttgtacacgtttgaggcttgtggc |
117 |
Q |
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| T |
52558292 |
atgaaacgataaatatataatgattgtaatatttacgatgatgaagtaggctacgtatggggtttgtaaatcactcttgtacacgtttgaggcttgtggc |
52558193 |
T |
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| Q |
118 |
aatgctgtctctgacaatgacttggtgagaaaattataatgtaatttctgtctgtaatatagagtaagt |
186 |
Q |
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| T |
52558192 |
aatgctgtctctgacaatgacttggtgagaaaattataatgtaatttctgtctgtaatatagagtaagt |
52558124 |
T |
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