View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20247_high_2 (Length: 520)

Name: NF20247_high_2
Description: NF20247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20247_high_2
NF20247_high_2
[»] chr1 (36 HSPs)
chr1 (11-504)||(37446544-37447023)
chr1 (16-153)||(37036502-37036639)
chr1 (18-153)||(39887481-39887617)
chr1 (18-151)||(8225186-8225322)
chr1 (33-148)||(44571109-44571224)
chr1 (33-153)||(37447424-37447544)
chr1 (33-151)||(946811-946929)
chr1 (33-151)||(15467486-15467604)
chr1 (33-134)||(32647724-32647825)
chr1 (33-153)||(28632124-28632244)
chr1 (72-152)||(41822751-41822831)
chr1 (33-134)||(10166926-10167027)
chr1 (33-151)||(35499480-35499598)
chr1 (35-151)||(6470228-6470345)
chr1 (84-153)||(37447969-37448038)
chr1 (33-146)||(41822078-41822191)
chr1 (33-149)||(44571622-44571738)
chr1 (33-132)||(50472147-50472246)
chr1 (33-151)||(21267346-21267464)
chr1 (33-151)||(32128515-32128633)
chr1 (28-149)||(23955981-23956102)
chr1 (26-106)||(41577842-41577922)
chr1 (33-151)||(48953977-48954094)
chr1 (38-153)||(31166647-31166763)
chr1 (93-153)||(47541849-47541909)
chr1 (76-151)||(220627-220702)
chr1 (65-151)||(4663774-4663859)
chr1 (33-86)||(23969495-23969548)
chr1 (33-153)||(12293020-12293131)
chr1 (27-113)||(14406086-14406170)
chr1 (100-151)||(24273084-24273135)
chr1 (33-71)||(37448037-37448075)
chr1 (65-151)||(41480954-41481040)
chr1 (93-146)||(26500947-26501000)
chr1 (33-153)||(39588638-39588757)
chr1 (93-149)||(47165077-47165133)
[»] chr7 (29 HSPs)
chr7 (24-151)||(41442603-41442729)
chr7 (11-152)||(40495607-40495750)
chr7 (33-149)||(13814504-13814620)
chr7 (28-151)||(23548119-23548242)
chr7 (33-153)||(40496150-40496270)
chr7 (33-151)||(45984765-45984883)
chr7 (33-151)||(45989125-45989243)
chr7 (11-153)||(39342158-39342302)
chr7 (36-151)||(36328328-36328443)
chr7 (35-153)||(46699745-46699863)
chr7 (33-154)||(2411743-2411864)
chr7 (33-153)||(14602769-14602889)
chr7 (33-151)||(28538677-28538795)
chr7 (33-147)||(30080312-30080426)
chr7 (33-151)||(35456236-35456354)
chr7 (33-151)||(43791453-43791571)
chr7 (36-149)||(38320713-38320825)
chr7 (33-151)||(26416352-26416469)
chr7 (35-151)||(42816956-42817072)
chr7 (33-151)||(45181757-45181874)
chr7 (33-153)||(25188792-25188912)
chr7 (33-151)||(37460470-37460588)
chr7 (33-154)||(9784450-9784572)
chr7 (30-145)||(30587436-30587549)
chr7 (33-96)||(764879-764942)
chr7 (33-104)||(19865604-19865675)
chr7 (93-151)||(26161987-26162045)
chr7 (27-113)||(30629485-30629571)
chr7 (33-104)||(46700596-46700667)
[»] chr3 (44 HSPs)
chr3 (27-151)||(37054821-37054945)
chr3 (27-153)||(42005471-42005597)
chr3 (33-153)||(2105161-2105281)
chr3 (27-151)||(47767851-47767975)
chr3 (33-153)||(7302824-7302944)
chr3 (33-151)||(30766984-30767102)
chr3 (28-151)||(26547404-26547526)
chr3 (33-152)||(21307110-21307229)
chr3 (28-153)||(34089002-34089127)
chr3 (18-126)||(47283825-47283934)
chr3 (33-151)||(24241711-24241829)
chr3 (33-151)||(36397511-36397629)
chr3 (33-153)||(35279468-35279588)
chr3 (43-151)||(53469951-53470059)
chr3 (33-153)||(7976982-7977102)
chr3 (34-149)||(28181800-28181915)
chr3 (33-151)||(44288024-44288142)
chr3 (44-153)||(43863484-43863593)
chr3 (34-151)||(50168191-50168308)
chr3 (33-153)||(671186-671306)
chr3 (28-151)||(48948008-48948131)
chr3 (8-145)||(645741-645879)
chr3 (33-153)||(52527441-52527561)
chr3 (33-121)||(55460697-55460785)
chr3 (33-121)||(6836590-6836678)
chr3 (36-124)||(13339118-13339206)
chr3 (34-153)||(21731351-21731470)
chr3 (33-147)||(34396148-34396262)
chr3 (19-148)||(48824637-48824767)
chr3 (33-126)||(31188944-31189037)
chr3 (36-124)||(13176218-13176306)
chr3 (40-100)||(15760157-15760217)
chr3 (44-153)||(38506482-38506591)
chr3 (50-106)||(46636297-46636353)
chr3 (18-73)||(31022087-31022141)
chr3 (33-96)||(47000159-47000222)
chr3 (27-114)||(53129463-53129550)
chr3 (93-151)||(19475968-19476026)
chr3 (65-145)||(28092127-28092206)
chr3 (93-153)||(33871762-33871822)
chr3 (93-153)||(47714428-47714488)
chr3 (93-151)||(8762278-8762336)
chr3 (33-118)||(46707055-46707141)
chr3 (65-142)||(36636290-36636367)
[»] chr5 (38 HSPs)
chr5 (28-151)||(22303388-22303511)
chr5 (28-147)||(37241163-37241282)
chr5 (11-154)||(10315057-10315201)
chr5 (33-153)||(15270415-15270535)
chr5 (33-153)||(32249647-32249767)
chr5 (33-151)||(17541884-17542002)
chr5 (27-153)||(41761742-41761868)
chr5 (33-151)||(15579998-15580118)
chr5 (33-153)||(22304732-22304852)
chr5 (33-153)||(927732-927852)
chr5 (33-149)||(28489893-28490009)
chr5 (33-151)||(6771823-6771941)
chr5 (33-151)||(12480331-12480449)
chr5 (35-152)||(8255395-8255507)
chr5 (33-153)||(33995442-33995562)
chr5 (34-150)||(37091019-37091135)
chr5 (65-148)||(22304646-22304729)
chr5 (33-153)||(28490337-28490458)
chr5 (33-151)||(33146512-33146630)
chr5 (90-151)||(35111699-35111760)
chr5 (93-153)||(25935149-25935209)
chr5 (35-149)||(14835224-14835338)
chr5 (33-153)||(1209097-1209215)
chr5 (27-151)||(8264871-8264995)
chr5 (93-153)||(12064316-12064376)
chr5 (33-149)||(17492691-17492807)
chr5 (33-123)||(30519386-30519475)
chr5 (33-123)||(30559726-30559815)
chr5 (93-151)||(37722754-37722812)
chr5 (11-77)||(35111632-35111700)
chr5 (108-153)||(40089410-40089455)
chr5 (33-96)||(9893750-9893813)
chr5 (100-151)||(13390962-13391013)
chr5 (37-96)||(24402314-24402373)
chr5 (33-115)||(18442933-18443015)
chr5 (93-151)||(20320529-20320587)
chr5 (33-113)||(31368283-31368363)
chr5 (35-99)||(34105466-34105530)
[»] chr8 (42 HSPs)
chr8 (28-149)||(24045390-24045511)
chr8 (28-151)||(24051698-24051821)
chr8 (34-151)||(28324223-28324340)
chr8 (19-151)||(44890015-44890147)
chr8 (33-154)||(36624807-36624928)
chr8 (28-153)||(33986423-33986548)
chr8 (27-153)||(1087844-1087970)
chr8 (33-151)||(44346221-44346339)
chr8 (28-153)||(33376827-33376952)
chr8 (33-153)||(14669-14789)
chr8 (27-155)||(10593498-10593625)
chr8 (33-153)||(43185411-43185531)
chr8 (41-151)||(9983087-9983197)
chr8 (33-151)||(29256913-29257031)
chr8 (33-151)||(35978592-35978710)
chr8 (33-145)||(40733641-40733753)
chr8 (11-151)||(29482341-29482482)
chr8 (65-150)||(31980047-31980132)
chr8 (33-149)||(26519984-26520100)
chr8 (38-153)||(31976116-31976231)
chr8 (65-150)||(31976666-31976751)
chr8 (33-149)||(13145015-13145131)
chr8 (33-151)||(34009120-34009238)
chr8 (33-157)||(14013263-14013386)
chr8 (33-151)||(29611757-29611872)
chr8 (27-119)||(35404318-35404410)
chr8 (65-154)||(8049640-8049729)
chr8 (33-149)||(10605952-10606068)
chr8 (90-150)||(26520509-26520568)
chr8 (33-153)||(7669075-7669187)
chr8 (88-134)||(8469885-8469931)
chr8 (93-153)||(30444804-30444864)
chr8 (93-149)||(36103252-36103308)
chr8 (43-153)||(28190229-28190339)
chr8 (93-134)||(7079780-7079821)
chr8 (112-153)||(13823458-13823499)
chr8 (33-86)||(15718587-15718640)
chr8 (28-77)||(26520567-26520616)
chr8 (33-113)||(34390382-34390463)
chr8 (250-322)||(2487143-2487215)
chr8 (75-151)||(6460496-6460572)
chr8 (262-322)||(10033463-10033522)
[»] chr2 (37 HSPs)
chr2 (33-149)||(7167190-7167306)
chr2 (41-149)||(7611421-7611529)
chr2 (16-153)||(30698694-30698832)
chr2 (33-151)||(32839188-32839306)
chr2 (27-153)||(3092671-3092797)
chr2 (33-151)||(45094009-45094120)
chr2 (33-151)||(35047201-35047319)
chr2 (43-151)||(32839715-32839823)
chr2 (27-153)||(769457-769583)
chr2 (33-151)||(13018176-13018294)
chr2 (33-151)||(14306364-14306482)
chr2 (27-153)||(33188787-33188913)
chr2 (33-153)||(1583330-1583450)
chr2 (33-153)||(7309434-7309554)
chr2 (33-157)||(44256065-44256189)
chr2 (33-151)||(8735965-8736083)
chr2 (27-96)||(7227615-7227684)
chr2 (33-153)||(19231015-19231134)
chr2 (33-153)||(39630657-39630777)
chr2 (33-151)||(28021706-28021824)
chr2 (27-153)||(17906067-17906193)
chr2 (36-153)||(2925085-2925202)
chr2 (19-145)||(6749500-6749618)
chr2 (33-154)||(41585191-41585312)
chr2 (33-149)||(11141736-11141852)
chr2 (33-125)||(11595236-11595328)
chr2 (33-149)||(21504881-21504997)
chr2 (76-153)||(19072305-19072382)
chr2 (33-125)||(11607138-11607230)
chr2 (39-126)||(30265768-30265855)
chr2 (33-118)||(29278619-29278702)
chr2 (33-148)||(19193746-19193861)
chr2 (41-125)||(2274335-2274419)
chr2 (73-153)||(31703921-31704001)
chr2 (59-151)||(31941413-31941505)
chr2 (110-151)||(7227577-7227618)
chr2 (27-95)||(3271393-3271461)
[»] chr4 (36 HSPs)
chr4 (19-151)||(16516589-16516716)
chr4 (19-153)||(54566589-54566724)
chr4 (33-153)||(24705760-24705880)
chr4 (27-151)||(42775780-42775904)
chr4 (27-151)||(30303544-30303668)
chr4 (33-151)||(2126268-2126386)
chr4 (13-147)||(53760328-53760452)
chr4 (33-153)||(46242620-46242740)
chr4 (28-151)||(40547768-40547891)
chr4 (33-148)||(47108650-47108765)
chr4 (28-151)||(35470549-35470672)
chr4 (33-149)||(46242169-46242284)
chr4 (33-151)||(21782403-21782521)
chr4 (33-153)||(17727841-17727962)
chr4 (33-153)||(28751742-28751862)
chr4 (27-126)||(26534912-26535011)
chr4 (43-153)||(41139912-41140022)
chr4 (33-150)||(27284221-27284338)
chr4 (33-148)||(42776515-42776630)
chr4 (27-150)||(56118170-56118293)
chr4 (35-96)||(29685650-29685711)
chr4 (41-148)||(5579654-5579761)
chr4 (84-151)||(29091606-29091673)
chr4 (33-115)||(16299813-16299895)
chr4 (33-153)||(9449410-9449528)
chr4 (33-121)||(31948003-31948091)
chr4 (84-143)||(56339549-56339608)
chr4 (93-154)||(10633183-10633244)
chr4 (33-121)||(13088344-13088432)
chr4 (46-150)||(13318216-13318319)
chr4 (99-154)||(21012436-21012491)
chr4 (99-151)||(31474007-31474059)
chr4 (44-95)||(24934570-24934621)
chr4 (73-151)||(19461266-19461344)
chr4 (65-121)||(17727508-17727564)
chr4 (103-151)||(41983368-41983416)
[»] scaffold0400 (1 HSPs)
scaffold0400 (33-151)||(4020-4138)
[»] scaffold0365 (1 HSPs)
scaffold0365 (33-151)||(4664-4782)
[»] scaffold0047 (1 HSPs)
scaffold0047 (18-149)||(49838-49970)
[»] chr6 (15 HSPs)
chr6 (18-149)||(15833022-15833154)
chr6 (33-149)||(31413291-31413407)
chr6 (33-153)||(15615918-15616038)
chr6 (28-151)||(1368902-1369025)
chr6 (33-153)||(6357823-6357943)
chr6 (33-152)||(8475560-8475679)
chr6 (55-153)||(724809-724907)
chr6 (35-151)||(10105439-10105555)
chr6 (69-153)||(1195771-1195855)
chr6 (33-133)||(28918588-28918688)
chr6 (88-153)||(9697874-9697939)
chr6 (41-106)||(26901384-26901449)
chr6 (93-151)||(34244843-34244901)
chr6 (99-151)||(13487433-13487485)
chr6 (93-153)||(34364896-34364956)
[»] scaffold0337 (2 HSPs)
scaffold0337 (33-126)||(15962-16055)
scaffold0337 (33-134)||(15503-15604)
[»] scaffold0318 (1 HSPs)
scaffold0318 (33-151)||(3288-3406)
[»] scaffold0169 (1 HSPs)
scaffold0169 (36-153)||(4453-4570)
[»] scaffold0301 (1 HSPs)
scaffold0301 (33-134)||(7583-7684)
[»] scaffold0129 (1 HSPs)
scaffold0129 (33-125)||(19333-19425)
[»] scaffold0417 (1 HSPs)
scaffold0417 (35-148)||(11499-11612)
[»] scaffold0065 (2 HSPs)
scaffold0065 (73-126)||(3004-3057)
scaffold0065 (33-134)||(2545-2646)
[»] scaffold0002 (1 HSPs)
scaffold0002 (36-124)||(130682-130770)


Alignment Details
Target: chr1 (Bit Score: 383; Significance: 0; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 11 - 504
Target Start/End: Complemental strand, 37447023 - 37446544
Alignment:
Q  11 ccaagaatatgacaatattttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataa 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37447023 ccaaaaatatgacaatattttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataa 37446924  T
Q  111 attcttcaaaatttcttaattaccccatccaaacacactctaatgttaccaatgaactcgtccaaaatcatgtggttaggtttagcacatttcacagtta 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37446923 attcttcaaaatttcttaattaccccatccaaacacactctaatgttaccaatgaactcgtccaaaatcatgtggttaggtttagcaaatttcacagtta 37446824  T
Q  211 accaaagattacctagcnnnnnnnnnnnnnngtgcgcattagtattgttaatttttatgttgaaagtgaggatcaaactcttgacctacttatcacttca 310  Q
    |||||||||||||||||              ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  37446823 accaaagattacctagc----tatatatatagtgcgcattagtattgttaatttttatgttgaaagtgaggatcaagctcttgacctccttatcacttca 37446728  T
Q  311 cttcttaactcttgacaatgaaatgtaaaatggaaattactataaaccttatatacctacaaatataatttccattttacatttttctattattctcttt 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37446727 cttcttaactcttgacaatgaaatgtaaaatggaaattactataaaccttatatacctacaaatataatttccattttacatttttctattattctcttt 37446628  T
Q  411 tcaacgactttatcaagagtagtaatatgtgcgacatgtacatttgttttatatgcaataaaataatatattcattttgttagttaaagaagaa 504  Q
    |||||||||||||||||||||         || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  37446627 tcaacgactttatcaagagta---------gcaacatgtacatttgttttatatgcaat-aaataatatattcattttgttagttaaaaaagaa 37446544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 37036639 - 37036502
Alignment:
Q  16 aatatgacaatattttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattct 115  Q
    ||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37036639 aatatgaaaatattttttttattattccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattct 37036540  T
Q  116 tcaaaatttcttaattaccccatccaaacacactctaa 153  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37036539 tcaaaatttcttaattaccccatccaaacacactctaa 37036502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 39887481 - 39887617
Alignment:
Q  18 tatgacaatattt-tgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattctt 116  Q
    ||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  39887481 tatgacaatatttgtttttatttctccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctaaaattctaaattctt 39887580  T
Q  117 caaaatttcttaattaccccatccaaacacactctaa 153  Q
    |||||||||| |||||| |||||||||||||||||||    
T  39887581 caaaatttctcaattactccatccaaacacactctaa 39887617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 8225186 - 8225322
Alignment:
Q  18 tatgacaatatttt---gtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattc 114  Q
    ||||||||||||||   ||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||| |||||||    
T  8225186 tatgacaatattttttagtttatttctccatccaaacaataatattaaggaatgaaagcaatttaattgattcatttgaattacctaaaattctaaattc 8225285  T
Q  115 ttcaaaatttcttaattaccccatccaaacacactct 151  Q
    |||||||||||| |||||| |||||||||||||||||    
T  8225286 ttcaaaatttctcaattactccatccaaacacactct 8225322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 44571109 - 44571224
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||    
T  44571109 tttattgctccatccaaacaataatatttaagaatgaaagcaatttaattgaatcatttgaattacctagaattttaaattcttcaaaatttctcaaata 44571208  T
Q  133 ccccatccaaacacac 148  Q
    | ||||||||||||||    
T  44571209 ctccatccaaacacac 44571224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 37447544 - 37447424
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| || ||    
T  37447544 tttattactccatccaaataataatatttaagaataaaagcaatttaattgaatcatttaaattacctagaattctaaattcttcaaaatttctcaaata 37447445  T
Q  133 ccccatccaaacacactctaa 153  Q
    |  ||||||||||||||||||    
T  37447444 cttcatccaaacacactctaa 37447424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 946811 - 946929
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| |  |||||| |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| ||||||||| |||||    
T  946811 tttattacttcatccaaacaaaagaatttagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaatta 946910  T
Q  133 ccccatccaaacacactct 151  Q
    || ||||||||||||||||    
T  946911 cctcatccaaacacactct 946929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 15467604 - 15467486
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||| ||||||| |  ||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| |||||||||||||||    
T  15467604 tttattacttcattcaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttcttaatta 15467505  T
Q  133 ccccatccaaacacactct 151  Q
    || ||||||||||||||||    
T  15467504 cctcatccaaacacactct 15467486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 33 - 134
Target Start/End: Original strand, 32647724 - 32647825
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||||||||||||| | ||||||| |||||||| |||||||||||||||||| ||||  |||||||| ||||||||| ||||||||| |||||    
T  32647724 tttattactccatccaaacaaaagtatttagaaatgaaagtaatttaattgaatcatttaaattttctagaattctaaattctttaaaatttctcaatta 32647823  T
Q  133 cc 134  Q
    ||    
T  32647824 cc 32647825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 28632244 - 28632124
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| || ||| || |||||||| |||||||||||||||||| |||| ||||||||| |||||| || | ||||||| |||||    
T  28632244 tttattacttcatccaaacaaaaaaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattttttataatttctcaatta 28632145  T
Q  133 ccccatccaaacacactctaa 153  Q
     | ||||||||||||||||||    
T  28632144 tctcatccaaacacactctaa 28632124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 72 - 152
Target Start/End: Complemental strand, 41822831 - 41822751
Alignment:
Q  72 gcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactcta 152  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| ||| ||||||||||||||    
T  41822831 gcaatttaattgaatcatttgaattacctataattctaaattcttcaaaatttcttaaatactccacccaaacacactcta 41822751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 33 - 134
Target Start/End: Original strand, 10166926 - 10167027
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||| | ||||||||||||||||||||| ||||||  || ||||||||||||||||||||| ||||||||| ||||||||| ||||||| | |||||    
T  10166926 tttattagtacatccaaacaataatatttagaaatgaagacattttaattgaatcatttgaattgcctagaattttaaattctttaaaatttatcaatta 10167025  T
Q  133 cc 134  Q
    ||    
T  10167026 cc 10167027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 35499480 - 35499598
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||||||||||||||| || | |||| || |||||| | |||||||||||||||||| ||||| |||||||| ||||||||| |||||||   |||||    
T  35499480 tttattactccatccaaataaaagtattgagaaatgaatgtaatttaattgaatcatttaaattatctagaattctaaattctttaaaattttcaaatta 35499579  T
Q  133 ccccatccaaacacactct 151  Q
    |  ||||||||||||||||    
T  35499580 cttcatccaaacacactct 35499598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 6470345 - 6470228
Alignment:
Q  35 tattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattc-ttcaaaatttcttaattac 133  Q
    ||||||||||||||||||| | |||| |  |||||||  ||||||||| |||||||| |||||||||||||| ||||||| || ||||||||| |||| |    
T  6470345 tattactccatccaaacaaaactattgaaaaatgaaaataatttaattaaatcatttaaattacctagaattctaaattctttaaaaatttctcaattgc 6470246  T
Q  134 cccatccaaacacactct 151  Q
    | ||||||||||||||||    
T  6470245 ctcatccaaacacactct 6470228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 37448038 - 37447969
Alignment:
Q  84 aatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactctaa 153  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  37448038 aatcatttgaattccctagaattctaaattcatcaaaatttctcaattaccccatccaaacacactctaa 37447969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 41822191 - 41822078
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||||||||||||| | |||| || |||||||||| ||||| ||||| |||| |||| ||||||||| ||||||||  ||||||||| |||||    
T  41822191 tttattactccatccaaacaaaagtattgagaaatgaaagcattttaaatgaattatttaaattgcctagaattctaaattctgtaaaatttctcaatta 41822092  T
Q  133 ccccatccaaacac 146  Q
    |  |||||||||||    
T  41822091 cttcatccaaacac 41822078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 149
Target Start/End: Original strand, 44571622 - 44571738
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||| |||||||||||||| |||||| || ||| |||| |||||||||||||| ||| |||||||||| ||| ||||||||| | ||||||  |||||    
T  44571622 tttatttctccatccaaacaaaaatattgagaaataaaagtaatttaattgaatcgtttaaattacctaggattctaaattctttataatttcccaatta 44571721  T
Q  133 ccccatccaaacacact 149  Q
    || |||| |||||||||    
T  44571722 cctcatcgaaacacact 44571738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 33 - 132
Target Start/End: Original strand, 50472147 - 50472246
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||||||||||||| | |||| |  |||||||| ||||||||||||| |||| |||| |||| |||| ||||||||| ||||||||| |||||    
T  50472147 tttattactccatccaaacaaaagtattgaaaaatgaaagtaatttaattgaataatttaaattgcctaaaattctaaattctttaaaatttctcaatta 50472246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 21267464 - 21267346
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||| ||||||| |  ||| || |||||||| |||||||||||||||| | |||| |||| ||||  |||||||| ||||||||| |||||    
T  21267464 tttattacttcatacaaacaaaagaattgagaaatgaaagtaatttaattgaatcatctaaattgcctataattcgaaattctttaaaatttctcaatta 21267365  T
Q  133 ccccatccaaacacactct 151  Q
     | ||||||||||||||||    
T  21267364 tctcatccaaacacactct 21267346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 32128515 - 32128633
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||||  || |||| | |||| || ||| |||| |||||||||||||||||  ||||||||| |||| ||||||||| ||||||||| |||||    
T  32128515 tttattactccacgcagacaaaagtattgagaaattaaaggaatttaattgaatcattaaaattacctaaaattttaaattctttaaaatttctcaatta 32128614  T
Q  133 ccccatccaaacacactct 151  Q
    || | | ||||||||||||    
T  32128615 cctcgttcaaacacactct 32128633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 28 - 149
Target Start/End: Complemental strand, 23956102 - 23955981
Alignment:
Q  28 ttttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttctt 127  Q
    |||| ||||||||||||| ||||||| |||||| || ||| |||| |||||||||||||||||| ||||  ||| |||| |||||| || |||||||| |    
T  23956102 ttttttttattactccattcaaacaaaaatattaagaaataaaagtaatttaattgaatcatttaaattgactaaaattctaaattttttaaaatttcct 23956003  T
Q  128 aattaccccatccaaacacact 149  Q
    |||| || | |||||| |||||    
T  23956002 aattgcctcttccaaatacact 23955981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 41577922 - 41577842
Alignment:
Q  26 tattttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaatt 106  Q
    |||||| ||||| ||| ||||||||||| |||||| || |||||||| |||||||||||||||||| |||| |||||||||    
T  41577922 tattttttttatcacttcatccaaacaaaaatattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaatt 41577842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 48953977 - 48954094
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||| ||| |||||| |  |||||||| ||||||||||||||||||  ||  |||| || | ||||||||||||||||||| |||||    
T  48953977 tttattacttcatccaa-caaaaatattaaaaaatgaaagtaatttaattgaatcatttagatagcctaaaactctaaattcttcaaaatttctcaatta 48954075  T
Q  133 ccccatccaaacacactct 151  Q
     | |||||||||| |||||    
T  48954076 gctcatccaaacatactct 48954094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 31166647 - 31166763
Alignment:
Q  38 tactccatccaaacaataatatttaggaatgaaagcaatttaattgaatc-atttgaattacctagaattataaattcttcaaaatttcttaattacccc 136  Q
    |||||||| ||||||| | |||| || |||||||| |||||||| ||||| |||| ||||  ||||| || ||||||||| | ||||||| |||||||      
T  31166647 tactccattcaaacaaaagtattgagaaatgaaagtaatttaatcgaatccatttaaattgactagatttctaaattctttacaatttctcaattacctg 31166746  T
Q  137 atccaaacacactctaa 153  Q
    |||||||||||||||||    
T  31166747 atccaaacacactctaa 31166763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 47541909 - 47541849
Alignment:
Q  93 aattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactctaa 153  Q
    |||| ||||||||| ||||||||| ||||||||| ||||||| ||||||||||||||||||    
T  47541909 aattgcctagaattttaaattctttaaaatttctaaattacctcatccaaacacactctaa 47541849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 220627 - 220702
Alignment:
Q  76 tttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    |||||||||||||||| |||| ||||||||| ||||||||  | ||||| | ||||||| ||||||||||||||||    
T  220627 tttaattgaatcatttaaattgcctagaattctaaattctctataatttttcaattacctcatccaaacacactct 220702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 4663774 - 4663859
Alignment:
Q  65 aatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    |||||||||| ||||||||||| ||||||| | | ||||||| ||||||| | ||||||| | ||||||| |||||||||| |||||    
T  4663774 aatgaaagcattttaattgaataatttgaa-tgcttagaattttaaattccttaaaatttgtcaattacctcatccaaacaaactct 4663859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 23969548 - 23969495
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaat 86  Q
    |||||| |||||| ||||||||||||||||| |||||| | |||||||||||||    
T  23969548 tttattcctccatacaaacaataatatttagaaatgaatgtaatttaattgaat 23969495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 12293131 - 12293020
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||| || |||||||||| ||||||||  |||||| |||||||||||||||         | ||||||||| |||||||||  | |||||  |||||    
T  12293131 tttattagtcaatccaaacaagaatatttacaaatgaaggcaatttaattgaat---------tgcctagaattctaaattctttgagatttcccaatta 12293041  T
Q  133 ccccatccaaacacactctaa 153  Q
    || ||||||||||||||||||    
T  12293040 cctcatccaaacacactctaa 12293020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 14406170 - 14406086
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaatt 113  Q
    ||||| ||||||||||  |||||| || || |||||| ||| |||| |||| ||||||||||||| ||||||||| |||| ||||||    
T  14406170 attttttttattactc--tccaaataaaaacatttagaaataaaagaaattcaattgaatcatttaaattacctaaaattctaaatt 14406086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 24273135 - 24273084
Alignment:
Q  100 tagaattataaattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    ||||||| ||||||||| ||||||||  ||||||| ||||||||||||||||    
T  24273135 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 24273084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 37448075 - 37448037
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaa 71  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  37448075 tttattacttcatccaaacaataatatttaagaatgaaa 37448037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 41481040 - 41480954
Alignment:
Q  65 aatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    |||||||  ||||||||||||| ||||||| | |||| |||| ||||| ||| ||||  | | ||||||| ||||||||||||||||    
T  41481040 aatgaaattaatttaattgaataatttgaactgcctaaaattttaaatgctttaaaaaatttaaattacctcatccaaacacactct 41480954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 26501000 - 26500947
Alignment:
Q  93 aattacctagaattataaattcttcaaaatttcttaattaccccatccaaacac 146  Q
    |||||||||||||| ||||||||| |||||||   ||||||| |||||||||||    
T  26501000 aattacctagaattttaaattctttaaaattttcaaattacctcatccaaacac 26500947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 39588757 - 39588638
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaag-caatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatt 131  Q
    |||||||||||||| |||||| ||||||||  ||| |||| ||||| |||||||| |||||||||   || |||| | | || || |||||||| |||||    
T  39588757 tttattactccatctaaacaaaaatattta-aaattaaagacaattcaattgaataatttgaatttattaaaattctcatttttttaaaatttc-taatt 39588660  T
Q  132 accccatccaaacacactctaa 153  Q
    || | |||||||||||||||||    
T  39588659 actcgatccaaacacactctaa 39588638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 47165133 - 47165077
Alignment:
Q  93 aattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacact 149  Q
    ||||||||| |||| ||||||||| |||||||   ||||||| ||||||||||||||    
T  47165133 aattacctaaaattttaaattctttaaaattttcaaattacctcatccaaacacact 47165077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 1e-51; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 24 - 151
Target Start/End: Complemental strand, 41442729 - 41442603
Alignment:
Q  24 aatattttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatt 123  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41442729 aatatttt-tttattactccatccaaacaataatatttaggaatgaaggcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatt 41442631  T
Q  124 tcttaattaccccatccaaacacactct 151  Q
    ||| |||||||| |||||||||||||||    
T  41442630 tctcaattacccaatccaaacacactct 41442603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 40495607 - 40495750
Alignment:
Q  11 ccaagaatatgacaata--ttttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattat 108  Q
    |||| ||||||||||||  |||| ||||||||| |||||||||||||| ||||| |||||||| ||||| |||||||||||||||||| |||| |||| |    
T  40495607 ccaaaaatatgacaataatttttttttattacttcatccaaacaataacatttaagaatgaaaacaattgaattgaatcatttgaattccctataattct 40495706  T
Q  109 aaattcttcaaaatttcttaattaccccatccaaacacactcta 152  Q
    |||||||||||||||||| ||||||| |||||||||||||||||    
T  40495707 aaattcttcaaaatttctcaattacctcatccaaacacactcta 40495750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 33 - 149
Target Start/End: Complemental strand, 13814620 - 13814504
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||| |||||    
T  13814620 tttattacttcatccaaacaataacatttaagaatgaaagcaattgaattgaatcatttgaattccctagaattctaaattcttcaaaatttctcaatta 13814521  T
Q  133 ccccatccaaacacact 149  Q
    ||| || ||||||||||    
T  13814520 ccctattcaaacacact 13814504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 23548242 - 23548119
Alignment:
Q  28 ttttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttctt 127  Q
    |||| ||||||||||||||||||||| | ||||||| |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| |||||||||     
T  23548242 ttttttttattactccatccaaacaaaagtatttagaaatgaaagtaatttaattgaatcatttaaatttcctagaattctaaattctttaaaatttctc 23548143  T
Q  128 aattaccccatccaaacacactct 151  Q
    ||||||| ||||||||||||||||    
T  23548142 aattacctcatccaaacacactct 23548119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 40496150 - 40496270
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| |  ||| || |||||||| |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  40496150 tttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattataaattctttaaaatttcttaatta 40496249  T
Q  133 ccccatccaaacacactctaa 153  Q
    || |||||||||| |||||||    
T  40496250 cctcatccaaacatactctaa 40496270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 45984765 - 45984883
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||| ||||||||| | |||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| |||||||||  ||||    
T  45984765 tttattactccgtccaaacaaaagtattaagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctctatta 45984864  T
Q  133 ccccatccaaacacactct 151  Q
    |||||||||||||||||||    
T  45984865 ccccatccaaacacactct 45984883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 45989125 - 45989243
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||| ||||||||| | |||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| |||||||||  ||||    
T  45989125 tttattactccgtccaaacaaaagtattaagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctctatta 45989224  T
Q  133 ccccatccaaacacactct 151  Q
    |||||||||||||||||||    
T  45989225 ccccatccaaacacactct 45989243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 153
Target Start/End: Complemental strand, 39342302 - 39342158
Alignment:
Q  11 ccaagaatatgacaat--attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattat 108  Q
    |||| |||||||||||  ||||| ||||||||| ||||||||||| |  ||| |  |||||||| |||||||||||||||||| |||| ||||||||| |    
T  39342302 ccaaaaatatgacaatgaattttttttattacttcatccaaacaaaagaattgaaaaatgaaagtaatttaattgaatcatttaaattgcctagaattct 39342203  T
Q  109 aaattcttcaaaatttcttaattaccccatccaaacacactctaa 153  Q
    |||||||| ||||||||| ||||||| ||||||||||||||||||    
T  39342202 aaattctttaaaatttctcaattacctcatccaaacacactctaa 39342158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 36 - 151
Target Start/End: Complemental strand, 36328443 - 36328328
Alignment:
Q  36 attactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccc 135  Q
    |||||||||||||||||| | |||| || |||||||| |||||||||||||||||| |||| ||||||||| |||||| || ||||||||| |||||||     
T  36328443 attactccatccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattttttaaaatttctcaattacct 36328344  T
Q  136 catccaaacacactct 151  Q
    ||||||||||||||||    
T  36328343 catccaaacacactct 36328328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 35 - 153
Target Start/End: Complemental strand, 46699863 - 46699745
Alignment:
Q  35 tattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattacc 134  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||||| ||||||||| | || |||| ||||||||||||||||||| || || |    
T  46699863 tattactccatccaaacaataatatttagaaatgaaggtaatttaattgaataatttgaattgcataaaattctaaattcttcaaaatttctcaactatc 46699764  T
Q  135 ccatccaaacacactctaa 153  Q
    || || |||||||||||||    
T  46699763 ccgtctaaacacactctaa 46699745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 33 - 154
Target Start/End: Original strand, 2411743 - 2411864
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| |  ||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| ||||||||| |||||    
T  2411743 tttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaatta 2411842  T
Q  133 ccccatccaaacacactctaat 154  Q
    || ||||||||||| |||||||    
T  2411843 cctcatccaaacactctctaat 2411864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 14602889 - 14602769
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||||||||||||| |  ||| || |||||||| ||||||||||||| |||| |||| ||||||||| ||||||||| ||||||| | |||||    
T  14602889 tttattactccatccaaacaaaagaattgagaaatgaaagtaatttaattgaattatttaaattgcctagaattctaaattctttaaaatttttcaatta 14602790  T
Q  133 ccccatccaaacacactctaa 153  Q
    || ||||||||||||||||||    
T  14602789 cctcatccaaacacactctaa 14602769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 28538795 - 28538677
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| |  ||| || |||||||| |||||||||||||||||| |||| |||| |||| ||||||||| ||||||||| |||||    
T  28538795 tttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctaaaattctaaattctttaaaatttctcaatta 28538696  T
Q  133 ccccatccaaacacactct 151  Q
    || ||||||||||||||||    
T  28538695 cctcatccaaacacactct 28538677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 30080426 - 30080312
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||||||||||||| | |||| || ||| |||| |||||||||||||||||| |||| | ||||||| ||||||||||||||||||| |||||    
T  30080426 tttattactccatccaaacaaaagtattgagaaataaaagtaatttaattgaatcatttaaattgcttagaattctaaattcttcaaaatttctcaatta 30080327  T
Q  133 ccccatccaaacaca 147  Q
    || |||| |||||||    
T  30080326 cctcatcaaaacaca 30080312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 35456236 - 35456354
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||||||||||||| |  ||| || |||||||| ||||||||||||| |||| |||| ||||||||| ||||||||| |||| || | |||||    
T  35456236 tttattactccatccaaacaaaagaattgagaaatgaaagtaatttaattgaattatttaaattgcctagaattctaaattctttaaaaattttcaatta 35456335  T
Q  133 ccccatccaaacacactct 151  Q
    || ||||||||||||||||    
T  35456336 cctcatccaaacacactct 35456354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 43791453 - 43791571
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||||||||||||| | |||| || |||||||  |||||||||||||||||| |||| || |||||| ||||||||| |||||||   |||||    
T  43791453 tttattactccatccaaacaaaagtattgagaaatgaaaataatttaattgaatcatttaaattgccaagaattctaaattctttaaaattttccaatta 43791552  T
Q  133 ccccatccaaacacactct 151  Q
    || ||||||||||||||||    
T  43791553 cctcatccaaacacactct 43791571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 38320713 - 38320825
Alignment:
Q  36 attactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccc 135  Q
    |||||||||| |||| |||||||||||  ||||||  ||||||||||| |||||||||||| ||||||||| ||||||||| ||||||| | |||||||     
T  38320713 attactccatacaaataataatatttaaaaatgaagacaatttaattgtatcatttgaattgcctagaattttaaattctttaaaattt-tcaattacca 38320811  T
Q  136 catccaaacacact 149  Q
    ||||||||||||||    
T  38320812 catccaaacacact 38320825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 26416352 - 26416469
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| | |||| |  |||||||| ||||||||||||| ||||  ||| ||||||||| ||||||||||||||||||| |||||    
T  26416352 tttattacttcatccaaacaaaagtattaaaaaatgaaagtaatttaattgaattatttagattgcctagaattctaaattcttcaaaatttctcaatta 26416451  T
Q  133 ccccatccaaacacactct 151  Q
    || ||| ||||||||||||    
T  26416452 cctcat-caaacacactct 26416469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 42816956 - 42817072
Alignment:
Q  35 tattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattacc 134  Q
    |||||||  |||||||||| |  ||| || |||||||| |||| ||||||||||||| |||| ||||||||| ||||||||| ||||||||| |||||||    
T  42816956 tattactttatccaaacaaaagaattgagaaatgaaagtaattcaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacc 42817055  T
Q  135 ccatccaaacacactct 151  Q
     ||||| ||||||||||    
T  42817056 tcatcctaacacactct 42817072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 45181874 - 45181757
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||||||| |||||||||| || |||||| |||||| |||| |||||||||| |||| |||| ||||||||| |||| |||  ||||||| | |||||    
T  45181874 tttattactctatccaaacaaaaagatttagaaatgaaggcaaattaattgaataatttcaattgcctagaattctaaactctctaaaattt-tcaatta 45181776  T
Q  133 ccccatccaaacacactct 151  Q
    || ||||||||||||||||    
T  45181775 cctcatccaaacacactct 45181757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 25188912 - 25188792
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||||||||||||| ||||||||  ||| || ||||||||||||| |||||| ||||  |||||||| |||||| |||||||    | |||||    
T  25188912 tttattactccatccaaacaaaaatatttaaaaattaaggcaatttaattgagtcatttaaattgtctagaattctaaattattcaaaaaaattcaatta 25188813  T
Q  133 ccccatccaaacacactctaa 153  Q
    || |||||||| |||||||||    
T  25188812 ccacatccaaatacactctaa 25188792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 37460588 - 37460470
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||| ||||||||||||| | |||| || ||| |||||| ||| ||||||| |||||||||  |||||||| ||||||||| |||| || | |||||    
T  37460588 tttattattccatccaaacaaaagtattgagaaattaaagcatttttattgaattatttgaattgtctagaattttaaattctttaaaaattttcaatta 37460489  T
Q  133 ccccatccaaacacactct 151  Q
    || |||||||| |||||||    
T  37460488 cctcatccaaatacactct 37460470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 33 - 154
Target Start/End: Complemental strand, 9784572 - 9784450
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattc-ttcaaaatttcttaatt 131  Q
    ||||||||| ||||||||||| |  ||| || ||| |||| |||||||||||||||| | |||| |||| |||| ||||||| || ||||||||| ||||    
T  9784572 tttattacttcatccaaacaaaagaattgagaaataaaagtaatttaattgaatcatctaaattgcctaaaattttaaattcttttaaaatttctcaatt 9784473  T
Q  132 accccatccaaacacactctaat 154  Q
    ||  | |||||||||||| ||||    
T  9784472 acttcgtccaaacacactttaat 9784450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 145
Target Start/End: Complemental strand, 30587549 - 30587436
Alignment:
Q  30 ttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaa 129  Q
    |||||| || |||||||||||||| |||  | || |||||||| |||||||||||||| ||| |||| ||||||||| ||||||||  |||||||   ||    
T  30587549 ttgttttttgctccatccaaacaagaat--tgagaaatgaaagtaatttaattgaatcttttaaattgcctagaattctaaattctctaaaattttccaa 30587452  T
Q  130 ttaccccatccaaaca 145  Q
    ||||| | ||||||||    
T  30587451 ttacctcgtccaaaca 30587436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 764879 - 764942
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaatt 96  Q
    |||||||||  |||||||||| ||||||||| ||| |||| ||||||||||||| |||||||||    
T  764879 tttattactttatccaaacaaaaatatttagaaattaaagtaatttaattgaataatttgaatt 764942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 19865675 - 19865604
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaa 104  Q
    |||||||||| |||||||||| | |||  || |||||||  |||||||||||||||||| ||||||||||||    
T  19865675 tttattactcaatccaaacaaaagtatcgagaaatgaaattaatttaattgaatcatttaaattacctagaa 19865604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 151
Target Start/End: Complemental strand, 26162045 - 26161987
Alignment:
Q  93 aattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    |||| ||||||||| ||||||||| ||||||||  ||||||| ||||||||||||||||    
T  26162045 aattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 26161987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 30629485 - 30629571
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaatt 113  Q
    ||||| ||||||||| ||||||||||| |  ||| |  |||||||| |||||||||||||||||| |||| |||| |||| ||||||    
T  30629485 attttttttattacttcatccaaacaaaagaattgaaaaatgaaagtaatttaattgaatcatttaaattgcctaaaattttaaatt 30629571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 46700596 - 46700667
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaa 104  Q
    |||||||||||| |||||||| | |||| |  |||||||  |||||||||||||||||| |||| |||||||    
T  46700596 tttattactccacccaaacaaaagtattgaaaaatgaaataaatttaattgaatcatttaaattgcctagaa 46700667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 8e-50; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 37054821 - 37054945
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttct 126  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37054821 attttttttattactccatccaaacaataatatttaagaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttct 37054920  T
Q  127 taattaccccatccaaacacactct 151  Q
     || ||| |||||||||||||||||    
T  37054921 caaatactccatccaaacacactct 37054945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 42005597 - 42005471
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttct 126  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42005597 attttttttattactccatccaaacaatagtatttaagaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttct 42005498  T
Q  127 taattaccccatccaaacacactctaa 153  Q
     || ||| |||||||||||||||||||    
T  42005497 caaatactccatccaaacacactctaa 42005471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 2105161 - 2105281
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  2105161 tttatttctccatccaaacaataatatttaagaatgaaaccaatttaattgaatcatttaaattacctagaattataaattcttcaaaatttctcaatta 2105260  T
Q  133 ccccatccaaacacactctaa 153  Q
    | |||||||||||||||||||    
T  2105261 ctccatccaaacacactctaa 2105281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 47767851 - 47767975
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttct 126  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||    
T  47767851 attttttttattactccatccaaacaataatatttaagaatgaaagcaatttaattgaatcatttgaattatcttgaattctaaattcttcaaaatttct 47767950  T
Q  127 taattaccccatccaaacacactct 151  Q
     || ||| |||||||||||||||||    
T  47767951 caaatactccatccaaacacactct 47767975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 7302824 - 7302944
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||| || ||    
T  7302824 tttattactccatccaaacaataatatttaagaatgaaagcaatttaattgaatcatatgaattatctagaattctaaattcttcaaaatttctcaaata 7302923  T
Q  133 ccccatccaaacacactctaa 153  Q
    | | |||||||||||||||||    
T  7302924 ctcaatccaaacacactctaa 7302944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 30766984 - 30767102
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||  |    
T  30766984 tttattactccatccaaacaataatatttaagaatgaaaacaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaaca 30767083  T
Q  133 ccccatccaaacacactct 151  Q
    | |||| ||||||||||||    
T  30767084 ctccattcaaacacactct 30767102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 26547404 - 26547526
Alignment:
Q  28 ttttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttctt 127  Q
    |||| ||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||||| |||| |||| ||||||| |||||| ||||     
T  26547404 ttttttttattacttcatccaaacaataacatttaagaatgaaagcaattgaattgaatcatttgaattccctaaaattctaaattcatcaaaa-ttctc 26547502  T
Q  128 aattaccccatccaaacacactct 151  Q
    ||||||||||||||||||||||||    
T  26547503 aattaccccatccaaacacactct 26547526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 33 - 152
Target Start/End: Complemental strand, 21307229 - 21307110
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||||||||||||| |||||| || |||||||||| |||||||||||||||| ||||| ||| |||| ||||||||| ||||||||  |||||    
T  21307229 tttattactccatccaaacaaaaatattgagaaatgaaagcattttaattgaatcatttcaattatctaaaattctaaattctttaaaatttcccaatta 21307130  T
Q  133 ccccatccaaacacactcta 152  Q
    || |||||||||||||||||    
T  21307129 cctcatccaaacacactcta 21307110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 34089002 - 34089127
Alignment:
Q  28 ttttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttctt 127  Q
    |||| ||||||||| ||||||||||| || ||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| |||||||||     
T  34089002 ttttttttattacttcatccaaacaaaaaaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctc 34089101  T
Q  128 aattaccccatccaaacacactctaa 153  Q
    ||||||  ||||||||||||||||||    
T  34089102 aattacatcatccaaacacactctaa 34089127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 47283934 - 47283825
Alignment:
Q  18 tatgacaatattt-tgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattctt 116  Q
    ||||||||||||| | |||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||| || |||| |||||||||    
T  47283934 tatgacaatatttgtttttatttctccatccaaacaataatatttaagaatgaaagcaatttaaatgaatcatttaaattacttaaaattttaaattctt 47283835  T
Q  117 caaaatttct 126  Q
    ||||||||||    
T  47283834 caaaatttct 47283825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 24241829 - 24241711
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||| |||||||||||||| |||||| || |||||||| |||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||||    
T  24241829 tttatttctccatccaaacaaaaatattgagaaatgaaagtaatttaattgaatcatttaaattgtctaggattctaaattctttaaaatttctcaatta 24241730  T
Q  133 ccccatccaaacacactct 151  Q
    || ||||||||||||||||    
T  24241729 cctcatccaaacacactct 24241711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 36397629 - 36397511
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| || ||| || |||||||| |||||||||||||||||| ||||  |||||||| ||||||||| ||||||||| |||||    
T  36397629 tttattacttcatccaaacaaaaaaattgagaaatgaaagtaatttaattgaatcatttaaattgtctagaattctaaattctttaaaatttctcaatta 36397530  T
Q  133 ccccatccaaacacactct 151  Q
    || ||||||||||||||||    
T  36397529 cctcatccaaacacactct 36397511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 35279588 - 35279468
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| || ||| || |||||||| |||||||||||||||||| |||||| ||||||| ||||||||| ||||||||  ||||     
T  35279588 tttattacttcatccaaacaaaaaaattgagaaatgaaagtaatttaattgaatcatttaaattacttagaattctaaattctttaaaatttcccaattg 35279489  T
Q  133 ccccatccaaacacactctaa 153  Q
    || ||||||||||||||||||    
T  35279488 cctcatccaaacacactctaa 35279468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 53470059 - 53469951
Alignment:
Q  43 catccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaa 142  Q
    ||||||||||| |  ||| || |||||||| |||||||||||||||||| |||||||||||||| ||||||||| ||||||||| ||||||| |||||||    
T  53470059 catccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattacctagaattctaaattctttaaaatttctcaattacctcatccaa 53469960  T
Q  143 acacactct 151  Q
    |||||||||    
T  53469959 acacactct 53469951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 7976982 - 7977102
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||| |||||||||||||| |||||| || |||||||| |||| ||||||||||||| |||| ||||| |||  |||||||| ||||||||  |||||    
T  7976982 tttatttctccatccaaacaaaaatattgagaaatgaaagtaattgaattgaatcatttaaattgcctaggattcgaaattctttaaaatttcccaatta 7977081  T
Q  133 ccccatccaaacacactctaa 153  Q
    || ||||||||||||||||||    
T  7977082 cctcatccaaacacactctaa 7977102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 149
Target Start/End: Complemental strand, 28181915 - 28181800
Alignment:
Q  34 ttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattac 133  Q
    |||||||||||||||||||| | |||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| |||||||   ||||||    
T  28181915 ttattactccatccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaattttccaattac 28181816  T
Q  134 cccatccaaacacact 149  Q
    | | ||||||||||||    
T  28181815 ctcgtccaaacacact 28181800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 44288142 - 44288024
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||| ||||| || ||||| | ||||||| |||||| |||||||||||||||| ||||||||  ||| ||||||||||| ||||||||||| ||||||    
T  44288142 tttatttctccacccgaacaaaattatttagaaatgaaggcaatttaattgaatcttttgaattgtctaaaattataaatttttcaaaatttcctaatta 44288043  T
Q  133 ccccatccaaacacactct 151  Q
    || | ||||||||||||||    
T  44288042 cctcgtccaaacacactct 44288024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 44 - 153
Target Start/End: Complemental strand, 43863593 - 43863484
Alignment:
Q  44 atccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaa 143  Q
    |||||||||| |  ||| || |||||||  |||||||||||||||||| |||||||||||||| ||||||||| ||||||||| ||||||| | ||||||    
T  43863593 atccaaacaaaagaattgagaaatgaaaataatttaattgaatcatttaaattacctagaattctaaattctttaaaatttctcaattacctcgtccaaa 43863494  T
Q  144 cacactctaa 153  Q
    ||||||||||    
T  43863493 cacactctaa 43863484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 50168308 - 50168191
Alignment:
Q  34 ttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattac 133  Q
    |||||||||||||||||||| ||||||||| ||||||  |||||||||||||  |||| |||| || |||||| |  |||||| ||||||||| ||||||    
T  50168308 ttattactccatccaaacaagaatatttagaaatgaagacaatttaattgaagtatttaaattgccaagaattctcgattctttaaaatttctcaattac 50168209  T
Q  134 cccatccaaacacactct 151  Q
    | ||||||||||||||||    
T  50168208 ctcatccaaacacactct 50168191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 671306 - 671186
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| |  ||| || |||||||| |||||||||||||||||| ||||  ||| |||| || |||||| ||||||||| |||||    
T  671306 tttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgtctataattttatattctttaaaatttctcaatta 671207  T
Q  133 ccccatccaaacacactctaa 153  Q
    || ||||||||||||||||||    
T  671206 cctcatccaaacacactctaa 671186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 48948008 - 48948131
Alignment:
Q  28 ttttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttctt 127  Q
    |||| ||||||| | ||||||||||| |  ||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| ||||||| |     
T  48948008 ttttttttattatttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttttc 48948107  T
Q  128 aattaccccatccaaacacactct 151  Q
    ||||||| |||||||||| |||||    
T  48948108 aattacctcatccaaacatactct 48948131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 645879 - 645741
Alignment:
Q  8 tgtccaagaatatgacaat-attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaatt 106  Q
    ||||||| ||||||||||| | ||| ||||||||||||| ||||||| | |||| || |||||||  |||||||| |||||||||||||||| | |||||    
T  645879 tgtccaaaaatatgacaattagtttttttattactccatacaaacaaaagtattgagaaatgaaaataatttaatcgaatcatttgaattacttggaatt 645780  T
Q  107 ataaattcttcaaaatttcttaattaccccatccaaaca 145  Q
     ||||||||| |||||||   ||||||| ||||||||||    
T  645779 ctaaattctttaaaattttccaattacctcatccaaaca 645741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 52527441 - 52527561
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||||||||||||| | ||||||  ||| |||| |||||||||||||||||| ||||   ||||||| |||||| || |||||||   |||||    
T  52527441 tttattactccatccaaacaaaagtatttaaaaataaaagtaatttaattgaatcatttaaattttttagaattctaaattttttaaaattttccaatta 52527540  T
Q  133 ccccatccaaacacactctaa 153  Q
    || ||||||||||||||||||    
T  52527541 cctcatccaaacacactctaa 52527561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 55460697 - 55460785
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaa 121  Q
    |||||||||||||||||||||  |||||||| |||||| |||||||||||||| |||||||||| |||| |||| ||||||||| ||||    
T  55460697 tttattactccatccaaacaaatatatttagtaatgaaggcaatttaattgaaacatttgaattgcctaaaattctaaattcttaaaaa 55460785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 6836678 - 6836590
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaa 121  Q
    |||||| |||||||||||||| |||||| |  |||||||||| ||||||||||||||||||||| |||| |||| ||||||||| ||||    
T  6836678 tttattgctccatccaaacaaaaatattgataaatgaaagcattttaattgaatcatttgaattgcctaaaattctaaattctttaaaa 6836590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 13339206 - 13339118
Alignment:
Q  36 attactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaattt 124  Q
    |||||||||||||||||| ||||||||  ||| |||  |||||||||||||||||| |||| |||| |||| |||||||||||||||||    
T  13339206 attactccatccaaacaaaaatatttaaaaataaaaaaaatttaattgaatcatttaaattgcctaaaattctaaattcttcaaaattt 13339118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 34 - 153
Target Start/End: Original strand, 21731351 - 21731470
Alignment:
Q  34 ttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattac 133  Q
    ||||||||| |||||||||| || ||| |  ||| |||| ||||||||||||| |||| |||| ||||||||| ||||||||   |||||| | ||||||    
T  21731351 ttattactctatccaaacaaaaaaattgaaaaataaaagtaatttaattgaattatttaaattgcctagaattttaaattctcttaaatttatcaattac 21731450  T
Q  134 cccatccaaacacactctaa 153  Q
    | ||||||||||||||||||    
T  21731451 ctcatccaaacacactctaa 21731470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 34396262 - 34396148
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||||||| | |||||||| | |||| || |||||||  |||||||||||||||||| |||| ||||||||| |||| |||| |||||||   |||||    
T  34396262 tttattactctacccaaacaaaagtattgagaaatgaaaagaatttaattgaatcatttaaattgcctagaattttaaactctttaaaattttccaatta 34396163  T
Q  133 ccccatccaaacaca 147  Q
    || ||||||||||||    
T  34396162 cctcatccaaacaca 34396148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 48824767 - 48824637
Alignment:
Q  19 atgacaata-ttttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttc 117  Q
    ||||||||| |||| |||||| || ||||||||||| | |||| |  |||||||  |||||||||||||||||| |||| |||| |||| |||||||||     
T  48824767 atgacaataattttttttattgcttcatccaaacaagagtattgataaatgaaaataatttaattgaatcatttaaattgcctaaaattctaaattcttt 48824668  T
Q  118 aaaatttcttaattaccccatccaaacacac 148  Q
    |||||||   |||||||  ||||||||||||    
T  48824667 aaaattttccaattaccttatccaaacacac 48824637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 126
Target Start/End: Complemental strand, 31189037 - 31188944
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttct 126  Q
    |||||| |||||||||||||| ||||||||| |||   | ||||||||||||||||||||||||   ||||||| ||| ||||| |||||||||    
T  31189037 tttatttctccatccaaacaaaaatatttagaaatcctaacaatttaattgaatcatttgaattgtttagaattctaatttctttaaaatttct 31188944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 13176306 - 13176218
Alignment:
Q  36 attactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaattt 124  Q
    ||||||||||| |||||| ||||||||  ||| | || |||||||||||||||||| ||||  ||| |||| |||||||||||||||||    
T  13176306 attactccatcgaaacaaaaatatttaaaaataacagaaatttaattgaatcatttaaattggctaaaattctaaattcttcaaaattt 13176218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 15760217 - 15760157
Alignment:
Q  40 ctccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacct 100  Q
    |||||||||||||| | |||| || ||||||| ||||||||||||||||||||||||||||    
T  15760217 ctccatccaaacaaaagtattcagaaatgaaaacaatttaattgaatcatttgaattacct 15760157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 153
Target Start/End: Complemental strand, 38506591 - 38506482
Alignment:
Q  44 atccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaa 143  Q
    |||||||||| | |||| || ||||||| || ||||| |||||||||| |||| |||| |||| ||||||||| |||||||   ||||||  ||| ||||    
T  38506591 atccaaacaaaagtattgagaaatgaaaacattttaaatgaatcatttaaattgcctaaaattctaaattctttaaaattttccaattacttcattcaaa 38506492  T
Q  144 cacactctaa 153  Q
    ||||||||||    
T  38506491 cacactctaa 38506482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 46636297 - 46636353
Alignment:
Q  50 acaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaatt 106  Q
    |||| ||||||||  |||||| ||||||||||||||||||||||||| |||||||||    
T  46636297 acaagaatatttaaaaatgaatgcaatttaattgaatcatttgaattgcctagaatt 46636353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 31022087 - 31022141
Alignment:
Q  18 tatgacaatattttgtttattactccatccaaacaataatatttaggaatgaaagc 73  Q
    ||||||||| |||| ||||||  |||||||||||||||||||||||||||||||||    
T  31022087 tatgacaat-ttttatttatttatccatccaaacaataatatttaggaatgaaagc 31022141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 47000159 - 47000222
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaatt 96  Q
    |||||||||| |||||||||| ||||||||  |||||| |  ||||||||||||||||||||||    
T  47000159 tttattactcaatccaaacaaaaatatttaaaaatgaatgtcatttaattgaatcatttgaatt 47000222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 53129550 - 53129463
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattc 114  Q
    ||||| ||||||||| ||||||||||| |  ||| || |||||||| |||||||||||||||||| |||| |||  |||| |||||||    
T  53129550 attttttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgccttaaattctaaattc 53129463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 151
Target Start/End: Original strand, 19475968 - 19476026
Alignment:
Q  93 aattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    |||| ||||||||| ||||||||| ||||||||  ||||||| ||||||||||||||||    
T  19475968 aattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 19476026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 145
Target Start/End: Original strand, 28092127 - 28092206
Alignment:
Q  65 aatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaaca 145  Q
    |||||||| |||||||||||||||| | |||| ||||||||| ||||||||| |||||||   ||||| | ||||||||||    
T  28092127 aatgaaagaaatttaattgaatcatataaattgcctagaatt-taaattctttaaaattttccaattagctcatccaaaca 28092206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 33871822 - 33871762
Alignment:
Q  93 aattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactctaa 153  Q
    |||| ||||||||| ||||||||| ||||||||  ||||||| |||||| |||||||||||    
T  33871822 aattgcctagaattttaaattctttaaaatttccaaattacctcatccacacacactctaa 33871762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 153
Target Start/End: Original strand, 47714428 - 47714488
Alignment:
Q  93 aattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactctaa 153  Q
    |||| |||||||||  |||||||| ||||||||  ||||||| ||||||||||||||||||    
T  47714428 aattgcctagaatttgaaattctttaaaatttccaaattacctcatccaaacacactctaa 47714488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 151
Target Start/End: Original strand, 8762278 - 8762336
Alignment:
Q  93 aattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    |||| ||||||||| ||||||||| |||||||   ||||||| ||||||||||||||||    
T  8762278 aattgcctagaattttaaattctttaaaattttcaaattacctcatccaaacacactct 8762336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 46707055 - 46707141
Alignment:
Q  33 tttattactccatccaaacaataa-tatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttca 118  Q
    ||||||||||| |||||| || || |||| |  |||||||| ||||||||||||| |||| |||| | ||||||| |||||||||||    
T  46707055 tttattactccgtccaaataaaaagtattgaaaaatgaaagtaatttaattgaataatttaaattgcttagaattctaaattcttca 46707141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 36636290 - 36636367
Alignment:
Q  65 aatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaa 142  Q
    |||||||| |||| |||||||| |||| | ||  |||||||||||| ||||| ||||||||| ||||| | |||||||    
T  36636290 aatgaaagtaattaaattgaataatttaatttgtctagaattataatttctttaaaatttctcaattatcgcatccaa 36636367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 3e-49; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 22303511 - 22303388
Alignment:
Q  28 ttttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttctt 127  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  22303511 ttttttttattactccatccaaacaataatatttaagaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctc 22303412  T
Q  128 aattaccccatccaaacacactct 151  Q
    || ||| |||||||||||||||||    
T  22303411 aaatactccatccaaacacactct 22303388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 37241282 - 37241163
Alignment:
Q  28 ttttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttctt 127  Q
    |||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||| |||||||| |||||||||||||||||||     
T  37241282 ttttttttattactccatccaaacaataatatttagaaatgaaaacaatttaattgaataatttgaattaactagaattctaaattcttcaaaatttctc 37241183  T
Q  128 aattaccccatccaaacaca 147  Q
    ||||||||||||||||||||    
T  37241182 aattaccccatccaaacaca 37241163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 11 - 154
Target Start/End: Original strand, 10315057 - 10315201
Alignment:
Q  11 ccaagaatatgacaatat-tttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattata 109  Q
    |||| ||||||||||||  ||| ||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||||| |||| |||| ||    
T  10315057 ccaaaaatatgacaataactttttttattacttcatccaaacaataacatttaagaatgaaagcaattgaattgaatcatttgaattccctataattcta 10315156  T
Q  110 aattcttcaaaatttcttaattaccccatccaaacacactctaat 154  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||    
T  10315157 aattcttcaaaatttctcaattaccccatccaaacacactttaat 10315201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 15270535 - 15270415
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||||||| |||||||||| |||||| || |||||||||| |||||||||||||||| |||||||||||||| ||||||||| |||||||   |||||    
T  15270535 tttattactctatccaaacaaaaatattgagaaatgaaagcattttaattgaatcatttcaattacctagaattctaaattctttaaaattttccaatta 15270436  T
Q  133 ccccatccaaacacactctaa 153  Q
    || ||| |||||||| |||||    
T  15270435 cctcattcaaacacattctaa 15270415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 32249767 - 32249647
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||||||||||||| | |||| || ||| |||| |||||||||||||||||| |||| ||||||||| ||||||||| |||||||   |||||    
T  32249767 tttattactccatccaaacaaaagtattgagaaataaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaattttcaaatta 32249668  T
Q  133 ccccatccaaacacactctaa 153  Q
    || ||||||||||||||||||    
T  32249667 cctcatccaaacacactctaa 32249647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 17542002 - 17541884
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||| |||||||||||||| |||||| || ||| |||| |||||||||||||||||| ||||  |||| ||| ||||||||| ||||||||| |||||    
T  17542002 tttatttctccatccaaacaaaaatattgagaaattaaagtaatttaattgaatcatttaaattgtctaggattctaaattctttaaaatttctcaatta 17541903  T
Q  133 ccccatccaaacacactct 151  Q
    || ||||||||||||||||    
T  17541902 cctcatccaaacacactct 17541884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 41761868 - 41761742
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttct 126  Q
    ||||| ||||||||| ||||||||||| |  ||| |  |||||||| |||||||||||||||||| |||| |||| |||| ||||||||| |||||||||    
T  41761868 attttttttattacttcatccaaacaaaagaattgaaaaatgaaagtaatttaattgaatcatttaaattgcctaaaattctaaattctttaaaatttct 41761769  T
Q  127 taattaccccatccaaacacactctaa 153  Q
     ||||||| ||||||||||||||||||    
T  41761768 caattacctcatccaaacacactctaa 41761742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 15580118 - 15579998
Alignment:
Q  33 tttattactccatccaaacaataa-tatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatt 131  Q
    ||||||||||||||||||||| || |||| || |||||||| |||||||||||||||||| ||||  |||||||| |||||| || |||||||| |||||    
T  15580118 tttattactccatccaaacaaaaagtattgagaaatgaaaggaatttaattgaatcatttaaattgtctagaattttaaattttttaaaatttcctaatt 15580019  T
Q  132 accc-catccaaacacactct 151  Q
    |||| ||||||||||||||||    
T  15580018 accctcatccaaacacactct 15579998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 22304852 - 22304732
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||| |||||||||||||| |||||| || |||||||| |||||||||||||||||| |||| ||||| ||| ||||||||| ||||||||  |||||    
T  22304852 tttatttctccatccaaacaaaaatattgagaaatgaaagtaatttaattgaatcatttaaattgcctaggattctaaattctttaaaatttcccaatta 22304753  T
Q  133 ccccatccaaacacactctaa 153  Q
    || |||| ||| |||||||||    
T  22304752 cctcatcaaaatacactctaa 22304732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 927732 - 927852
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| |  ||| || |||||||| ||||||||| |||||||| ||||  |||||||| ||||||||| ||||||||| |||||    
T  927732 tttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattaaatcatttaaattgtctagaattctaaattctttaaaatttctcaatta 927831  T
Q  133 ccccatccaaacacactctaa 153  Q
    || ||| ||||||||||||||    
T  927832 cctcattcaaacacactctaa 927852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 33 - 149
Target Start/End: Original strand, 28489893 - 28490009
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||| |||||||||||||| |||||| || |||||| | |||||||||||||||||| |||| ||||| ||| ||||||| | |||||||  ||||||    
T  28489893 tttatttctccatccaaacaaaaatattgagaaatgaacgtaatttaattgaatcatttaaattgcctaggattctaaattccttaaaattttctaatta 28489992  T
Q  133 ccccatccaaacacact 149  Q
    || ||||||||||||||    
T  28489993 cctcatccaaacacact 28490009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 6771941 - 6771823
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||| ||||||||||||||  | |||| || |||||||  ||||||||||||||||||||||| | ||||||| ||||||||| ||||||||  |||||    
T  6771941 tttatcactccatccaaacagaagtattgagaaatgaaaataatttaattgaatcatttgaattgcatagaattctaaattctttaaaatttcccaatta 6771842  T
Q  133 ccccatccaaacacactct 151  Q
     | ||||||||||||||||    
T  6771841 actcatccaaacacactct 6771823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 12480331 - 12480449
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||| ||||| | |||| || |||||||| |||||||||||||||||| |||| | ||||||| ||||||||| |||||||   |||||    
T  12480331 tttattacttcatcctaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattgcttagaattctaaattctttaaaattttccaatta 12480430  T
Q  133 ccccatccaaacacactct 151  Q
    || ||||||||||||||||    
T  12480431 cctcatccaaacacactct 12480449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 35 - 152
Target Start/End: Original strand, 8255395 - 8255507
Alignment:
Q  35 tattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattacc 134  Q
    ||||||||||||||||||| ||||||||| ||||| | |     ||||||||||||| |||| |||| |||||||||||||||||||||||| ||||| |    
T  8255395 tattactccatccaaacaagaatatttagaaatgataac-----aattgaatcatttaaattgcctaaaattataaattcttcaaaatttctcaattatc 8255489  T
Q  135 ccatccaaacacactcta 152  Q
     |||||||||| ||||||    
T  8255490 tcatccaaacatactcta 8255507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 33995562 - 33995442
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||||||||||||||| || | || | || |||| ||||| ||||||||||||||||||||| |||| |||| ||| ||||| ||||||| | |||||    
T  33995562 tttattactccatccaaaaaaaagtaatgagaaatggaagcattttaattgaatcatttgaattgcctaaaattctaatttctttaaaatttgtcaatta 33995463  T
Q  133 ccccatccaaacacactctaa 153  Q
    |  ||||||||||||||||||    
T  33995462 catcatccaaacacactctaa 33995442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 34 - 150
Target Start/End: Original strand, 37091019 - 37091135
Alignment:
Q  34 ttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattac 133  Q
    |||||||| ||||||||||  | |||| || |||||||| |||||||||||||||||| ||||||||||| || ||||||||| || ||||   ||||||    
T  37091019 ttattacttcatccaaacataagtattaagaaatgaaagtaatttaattgaatcattttaattacctagagttctaaattctttaagatttaccaattac 37091118  T
Q  134 cccatccaaacacactc 150  Q
    | |||||||||||||||    
T  37091119 ctcatccaaacacactc 37091135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 148
Target Start/End: Original strand, 22304646 - 22304729
Alignment:
Q  65 aatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacac 148  Q
    |||||||| |||||||||||||||||| ||||  |||||||| ||||||||| ||||||||| ||||||| |||||||||||||    
T  22304646 aatgaaagtaatttaattgaatcatttaaattgtctagaattctaaattctttaaaatttctcaattacctcatccaaacacac 22304729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 28490337 - 28490458
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaa---tttcttaa 129  Q
    ||||||| ||||||||||||| | |||| || |||||||| |||||||||||||||||| |||| ||| ||||| ||||||||| ||||   ||||  ||    
T  28490337 tttattattccatccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattgccttgaattttaaattctttaaaaaaatttc--aa 28490434  T
Q  130 ttaccccatccaaacacactctaa 153  Q
    ||||| ||||||||||||||||||    
T  28490435 ttacctcatccaaacacactctaa 28490458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 33146512 - 33146630
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||| |||||||||||||| |||||| || |||||||| || |||||||||| |||| |||| ||||  ||| |||||||||  |||||||| || ||    
T  33146512 tttatttctccatccaaacaaaaatattgagaaatgaaagtaacttaattgaattatttaaattgcctaagattctaaattctttgaaatttctcaacta 33146611  T
Q  133 ccccatccaaacacactct 151  Q
    || ||||||||||||||||    
T  33146612 cctcatccaaacacactct 33146630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 35111699 - 35111760
Alignment:
Q  90 ttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    ||||||| ||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  35111699 ttgaattccctagaattctaaattctttaaaatttctcaattaccccatccaaacacactct 35111760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 25935209 - 25935149
Alignment:
Q  93 aattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactctaa 153  Q
    |||| ||||||||| ||||||||| ||||||||| ||||||| ||||||||||||||||||    
T  25935209 aattgcctagaattttaaattctttaaaatttctaaattacctcatccaaacacactctaa 25935149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 35 - 149
Target Start/End: Original strand, 14835224 - 14835338
Alignment:
Q  35 tattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattacc 134  Q
    ||||||| ||||||||||| | |||| || ||||| |  | |||||||||||||||| ||||||||| | || ||||||||| ||||||||  ||||||     
T  14835224 tattactacatccaaacaaaagtattgagaaatgataatattttaattgaatcatttaaattacctaaacttctaaattctttaaaatttcccaattact 14835323  T
Q  135 ccatccaaacacact 149  Q
      |||||||||||||    
T  14835324 ttatccaaacacact 14835338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 1209097 - 1209215
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||| ||||||| | |||| |  |||||||| |||||||||||||||||| ||||  ||| | || ||||||||| ||||||||| |||      
T  1209097 tttattacttcattcaaacaaaagtattgaaaaatgaaagtaatttaattgaatcatttaaattgtctaaatttctaaattctttaaaatttctcaat-- 1209194  T
Q  133 ccccatccaaacacactctaa 153  Q
     | ||||||||||||||||||    
T  1209195 gctcatccaaacacactctaa 1209215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 8264871 - 8264995
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttct 126  Q
    ||||| ||||||||||||||||||||| | |||| |  ||||| || |||||||||||||||||| |||| | ||||||   |||||||| ||||    |    
T  8264871 attttttttattactccatccaaacaaaagtattgaaaaatgagagtaatttaattgaatcatttaaattgcttagaatataaaattctttaaaaaaatt 8264970  T
Q  127 taattaccccatccaaacacactct 151  Q
     ||||| | ||||||||||||||||    
T  8264971 caattagctcatccaaacacactct 8264995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 12064376 - 12064316
Alignment:
Q  93 aattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactctaa 153  Q
    |||| ||||||||| ||||||||| ||||||||  ||||||| ||||||||||||||||||    
T  12064376 aattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 12064316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 149
Target Start/End: Complemental strand, 17492807 - 17492691
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||||||||| |||||||| ||||||||| ||||||  |||| ||||| ||| ||||||||| | || | |   ||||| || |||||||  ||||||    
T  17492807 tttattactccagccaaacaaaaatatttagaaatgaagacaatgtaatttaataatttgaattgcttatattctaaaattttttaaaattttctaatta 17492708  T
Q  133 ccccatccaaacacact 149  Q
    || ||||||||||||||    
T  17492707 cctcatccaaacacact 17492691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 30519386 - 30519475
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatt 123  Q
    |||||||||||| |||||||| | |||| |  |||||||| |||||||| ||||||||| |||| |||| |||| ||||||||| ||||||    
T  30519386 tttattactccacccaaacaaaagtattgaaaaatgaaagaaatttaatcgaatcatttaaattgcctaaaatt-taaattctttaaaatt 30519475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 30559726 - 30559815
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatt 123  Q
    |||||||||||| |||||||| | |||| |  |||||||| |||||||| ||||||||| |||| |||| |||| ||||||||| ||||||    
T  30559726 tttattactccacccaaacaaaagtattgaaaaatgaaagaaatttaatcgaatcatttaaattgcctaaaatt-taaattctttaaaatt 30559815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 151
Target Start/End: Complemental strand, 37722812 - 37722754
Alignment:
Q  93 aattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    |||||||||||||| ||||||||| ||||||||  |||||| | |||||||||||||||    
T  37722812 aattacctagaattttaaattctttaaaatttccaaattactcaatccaaacacactct 37722754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 35111632 - 35111700
Alignment:
Q  11 ccaagaatatgacaata--ttttgtttattactccatccaaacaataatatttaggaatgaaagcaatt 77  Q
    |||| ||||||||||||  |||| ||||||||| |||| ||||||||| ||||| ||||||||||||||    
T  35111632 ccaaaaatatgacaataatttttttttattacttcatctaaacaataacatttaagaatgaaagcaatt 35111700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 40089455 - 40089410
Alignment:
Q  108 taaattcttcaaaatttcttaattaccccatccaaacacactctaa 153  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||||    
T  40089455 taaattctttaaaatttcctaattacctcatccaaacacactctaa 40089410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 9893813 - 9893750
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaatt 96  Q
    |||||||||||| |||||||| | |||| |  |||||||| |||||||||||||||||| ||||    
T  9893813 tttattactccacccaaacaaaagtattgaaaaatgaaagaaatttaattgaatcatttaaatt 9893750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 13391013 - 13390962
Alignment:
Q  100 tagaattataaattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    ||||||| ||||||||| ||||||||  ||||||| ||||||||||||||||    
T  13391013 tagaattctaaattctttaaaatttcccaattacctcatccaaacacactct 13390962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 24402373 - 24402314
Alignment:
Q  37 ttactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaatt 96  Q
    ||||| ||||||||||| |||||||||  || ||| |||||||||||||||| |||||||    
T  24402373 ttacttcatccaaacaagaatatttagatattaaaacaatttaattgaatcaattgaatt 24402314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 115
Target Start/End: Original strand, 18442933 - 18443015
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattct 115  Q
    |||| |||| |||||||| || ||||||||  ||||||  |||||||||||||| ||||||||||   |||||| ||||||||    
T  18442933 tttactacttcatccaaataaaaatatttaaaaatgaagacaatttaattgaatgatttgaattaatcagaattctaaattct 18443015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 151
Target Start/End: Complemental strand, 20320587 - 20320529
Alignment:
Q  93 aattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    |||| ||||||||| ||||||||| |||||||   ||||||| ||||||||||||||||    
T  20320587 aattgcctagaattttaaattctttaaaattttcaaattacctcatccaaacacactct 20320529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 31368283 - 31368363
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaatt 113  Q
    |||||||||| ||||||| || | |||| |  |||||||| |||||||||||||||||| ||||   ||||||| ||||||    
T  31368283 tttattactctatccaaaaaaaattattgaaaaatgaaagaaatttaattgaatcatttaaattgtttagaattctaaatt 31368363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 34105466 - 34105530
Alignment:
Q  35 tattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacc 99  Q
    ||||||||||||||||||| | |||| || | | ||| || ||||||||||| ||||||||||||    
T  34105466 tattactccatccaaacaaaagtattgagaattaaaatcattttaattgaataatttgaattacc 34105530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 5e-48; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 28 - 149
Target Start/End: Original strand, 24045390 - 24045511
Alignment:
Q  28 ttttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttctt 127  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  24045390 ttttttttattactccatccaaacaataatatttaagaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctc 24045489  T
Q  128 aattaccccatccaaacacact 149  Q
    || ||| |||||||||||||||    
T  24045490 aaatactccatccaaacacact 24045511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 24051698 - 24051821
Alignment:
Q  28 ttttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttctt 127  Q
    |||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  24051698 ttttttttattactccatccaaacaataatatttaaaaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctc 24051797  T
Q  128 aattaccccatccaaacacactct 151  Q
    || ||| |||||||||||||||||    
T  24051798 aaatactccatccaaacacactct 24051821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 28324340 - 28324223
Alignment:
Q  34 ttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattac 133  Q
    ||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||    
T  28324340 ttattactccatccaaaaaataatatttaagaatgaaaacaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaatac 28324241  T
Q  134 cccatccaaacacactct 151  Q
     |||||||||||||||||    
T  28324240 tccatccaaacacactct 28324223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 44890015 - 44890147
Alignment:
Q  19 atgacaatattttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttca 118  Q
    ||||||||| ||| |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||    
T  44890015 atgacaataatttttttactactccatccaaacaataatatttaagaatgaaagcaatttaatttaataatttgaattacctagaattctaaatttttca 44890114  T
Q  119 aaatttcttaattaccccatccaaacacactct 151  Q
    |||||||| |||||||  |||||||||||||||    
T  44890115 aaatttctcaattaccttatccaaacacactct 44890147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 33 - 154
Target Start/End: Complemental strand, 36624928 - 36624807
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||||| | ||||||| ||||||||||||||||||| |||||    
T  36624928 tttattacttcatccaaacaataacatttaagaatgaaagcaattgaattgaatcatttgaattccttagaattctaaattcttcaaaatttctcaatta 36624829  T
Q  133 ccccatccaaacacactctaat 154  Q
     |||||| ||||||||||||||    
T  36624828 tcccatctaaacacactctaat 36624807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 33986423 - 33986548
Alignment:
Q  28 ttttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttctt 127  Q
    |||| ||||||||||||||||||||| | |||| || |||||||| |||||||||||||||||| |||| |||||||||   ||||||| |||||||||     
T  33986423 ttttttttattactccatccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattccgaattctttaaaatttctc 33986522  T
Q  128 aattaccccatccaaacacactctaa 153  Q
    ||||||| ||||||||||||||||||    
T  33986523 aattacctcatccaaacacactctaa 33986548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 1087970 - 1087844
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttct 126  Q
    ||||| ||||||||||||||||||||| | ||||||| ||| |||| |||||||||||||||||| |||| |||| |||| ||||||||| |||||||||    
T  1087970 attttttttattactccatccaaacaaaagtatttagaaataaaagtaatttaattgaatcatttaaatttcctaaaattctaaattctttaaaatttct 1087871  T
Q  127 taattaccccatccaaacacactctaa 153  Q
     ||||||| ||| |||||| |||||||    
T  1087870 caattacctcattcaaacatactctaa 1087844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 44346339 - 44346221
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| |  ||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| ||||||||| |||||    
T  44346339 tttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaatta 44346240  T
Q  133 ccccatccaaacacactct 151  Q
    || ||||||||||||||||    
T  44346239 cctcatccaaacacactct 44346221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 33376952 - 33376827
Alignment:
Q  28 ttttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttctt 127  Q
    |||| ||||||| | ||||||||||| |  ||| || |||||||| |||||||||||||||||| |||||||||||||| ||||||||| ||||||| |     
T  33376952 ttttttttattatttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattacctagaattctaaattctttaaaatttatc 33376853  T
Q  128 aattaccccatccaaacacactctaa 153  Q
    ||||||| ||||||||||||||||||    
T  33376852 aattacctcatccaaacacactctaa 33376827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 14669 - 14789
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| |  ||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| ||||||||| ||||     
T  14669 tttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattt 14768  T
Q  133 ccccatccaaacacactctaa 153  Q
    || ||||||||||||||||||    
T  14769 cctcatccaaacacactctaa 14789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 27 - 155
Target Start/End: Original strand, 10593498 - 10593625
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttct 126  Q
    ||||| ||||||||||||||||||||| | |||| |  |||||||| |||||||||||||||||| |||| ||||||||| |||||| || |||||||||    
T  10593498 attttttttattactccatccaaacaaaagtattaaaaaatgaaagtaatttaattgaatcatttaaattgcctagaattttaaatt-tttaaaatttct 10593596  T
Q  127 taattaccccatccaaacacactctaatg 155  Q
     ||||||| ||||||||||||||| ||||    
T  10593597 caattacctcatccaaacacactcaaatg 10593625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 43185411 - 43185531
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| |  ||| || |||||||| |||||||||||||||||| ||||  |||||||| ||||||||| ||||||||| |||||    
T  43185411 tttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgtctagaattctaaattctttaaaatttctcaatta 43185510  T
Q  133 ccccatccaaacacactctaa 153  Q
    || ||||||||||||||||||    
T  43185511 cctcatccaaacacactctaa 43185531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 9983087 - 9983197
Alignment:
Q  41 tccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatcc 140  Q
    |||||||||||||  |||||||  ||||||| ||||| ||||||||||||||||||   ||||||| ||||||||||||||||||| ||||||| |||||    
T  9983087 tccatccaaacaaggatatttaaaaatgaaatcaattcaattgaatcatttgaattgattagaattctaaattcttcaaaatttctcaattacctcatcc 9983186  T
Q  141 aaacacactct 151  Q
    |||||||||||    
T  9983187 aaacacactct 9983197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 29257031 - 29256913
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| |  ||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| ||||||||| |||||    
T  29257031 tttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaatta 29256932  T
Q  133 ccccatccaaacacactct 151  Q
    || | ||||||||||||||    
T  29256931 cctcgtccaaacacactct 29256913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 35978710 - 35978592
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||||||||| |||||||| | |||| || |||||||| |||||||||||||||||| ||||  |||||||| ||||||||| ||||||||| ||||     
T  35978710 tttattactccacccaaacaaaagtattgagaaatgaaaggaatttaattgaatcatttaaattgactagaattttaaattctttaaaatttctcaattg 35978611  T
Q  133 ccccatccaaacacactct 151  Q
    || ||||||||||||||||    
T  35978610 cctcatccaaacacactct 35978592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 33 - 145
Target Start/End: Complemental strand, 40733753 - 40733641
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| |  ||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| ||||||||| |||||    
T  40733753 tttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattttaaattctttaaaatttctcaatta 40733654  T
Q  133 ccccatccaaaca 145  Q
    || ||||||||||    
T  40733653 cctcatccaaaca 40733641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 29482482 - 29482341
Alignment:
Q  11 ccaagaatatgacaat-attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattata 109  Q
    |||| ||||||||||| | ||| || |||| | ||||||||||| |  ||| || |||||||| |||||||||||||||||| |||| |||| |||| ||    
T  29482482 ccaaaaatatgacaatgaattttttaattagttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaatttcctataattcta 29482383  T
Q  110 aattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||    
T  29482382 aattctttaaaatttctcaattacctcatccaaacacactct 29482341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 65 - 150
Target Start/End: Complemental strand, 31980132 - 31980047
Alignment:
Q  65 aatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactc 150  Q
    |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| ||||||||| ||||||| |||||||||||||||    
T  31980132 aatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactc 31980047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 33 - 149
Target Start/End: Complemental strand, 26520100 - 26519984
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||||||||||||| | |||| || |||||||| | |||||||||||||||| |||| ||||||||| ||||||||| ||||||| | |||||    
T  26520100 tttattactccatccaaacaaaagtattgagaaatgaaagtagtttaattgaatcatttaaattgcctagaattttaaattctttaaaatttatcaatta 26520001  T
Q  133 ccccatccaaacacact 149  Q
    |   |||||||||||||    
T  26520000 ctttatccaaacacact 26519984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 31976231 - 31976116
Alignment:
Q  38 tactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattacccca 137  Q
    |||||| ||||||||| | |||| || ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |   ||| | ||||||| ||    
T  31976231 tactccgtccaaacaaaagtattgagaaataaaagcaatttaattgaatcatttgaattacctagaattctaaattcttaattttttttcaattacctca 31976132  T
Q  138 tccaaacacactctaa 153  Q
    |||||||||| |||||    
T  31976131 tccaaacacattctaa 31976116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 65 - 150
Target Start/End: Complemental strand, 31976751 - 31976666
Alignment:
Q  65 aatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactc 150  Q
    |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| ||||||||| ||||||| |||||||| ||||||    
T  31976751 aatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaattacctcatccaaaaacactc 31976666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 149
Target Start/End: Original strand, 13145015 - 13145131
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||||||||| |||||||| |||||| || ||| |||| ||||||||| |||||||| |||| ||||||||| ||||||||| ||| ||||  |||||    
T  13145015 tttattactccacccaaacaaaaatattgagaaataaaaggaatttaattaaatcatttaaattgcctagaattttaaattctttaaattttcccaatta 13145114  T
Q  133 ccccatccaaacacact 149  Q
    || || |||||||||||    
T  13145115 cctcacccaaacacact 13145131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 34009120 - 34009238
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||| |||||||||||||| |||||| || |||||||| || |||||||||| |||| |||| ||||  ||| |||||||||  |||||||| || ||    
T  34009120 tttatttctccatccaaacaaaaatattgagaaatgaaagtaacttaattgaattatttaaattgcctaagattctaaattctttgaaatttctcaacta 34009219  T
Q  133 ccccatccaaacacactct 151  Q
    || ||||||||||||||||    
T  34009220 cctcatccaaacacactct 34009238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 33 - 157
Target Start/End: Complemental strand, 14013386 - 14013263
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||| || ||||||||||||| |||||| |||||| ||||||||| |||||| |||  ||| ||||||||| ||||||| |||||||||  ||||||    
T  14013386 tttattaatctatccaaacaataagatttagaaatgaaggcaatttaa-tgaatcttttatattgcctagaattctaaattcatcaaaattttctaatta 14013288  T
Q  133 ccccatccaaacacactctaatgtt 157  Q
     | | |||||| |||||||||||||    
T  14013287 actcgtccaaatacactctaatgtt 14013263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 29611757 - 29611872
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| |   || || |||||||| |||||||||||||||||| |||| |||| |||| ||||||||| |||||||   |||||    
T  29611757 tttattacttcatccaaacaaaa---ttgagaaatgaaagtaatttaattgaatcatttaaattgcctaaaattctaaattctttaaaattttccaatta 29611853  T
Q  133 ccccatccaaacacactct 151  Q
    || ||||||||||||||||    
T  29611854 ccacatccaaacacactct 29611872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 35404410 - 35404318
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaa 119  Q
    ||||| |||||||||  |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||| ||||  |||||| ||||    
T  35404410 attttttttattactgtatccaaacaataatatttaaaaatgaaatcaatttaattgaatgatttgaattacctaaaattcaaaattcctcaa 35404318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 8049640 - 8049729
Alignment:
Q  65 aatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactctaat 154  Q
    ||||||| || ||||||||||||||||||||||| ||||| | ||||||||| ||||  | | ||||||| |||||||||||||| ||||    
T  8049640 aatgaaaacattttaattgaatcatttgaattacatagaactctaaattctttaaaaaatttcaattacctcatccaaacacactataat 8049729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 149
Target Start/End: Original strand, 10605952 - 10606068
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||| | ||| ||||||  ||||||||  ||| || | |||||||||||||||||||||||  ||| |||| ||||||||||||||    |||||||    
T  10605952 tttattatttcatgcaaacacgaatatttaaaaattaaggtaatttaattgaatcatttgaattgactaaaattctaaattcttcaaaaaaaattaatta 10606051  T
Q  133 ccccatccaaacacact 149  Q
    || ||||||||||||||    
T  10606052 cctcatccaaacacact 10606068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 26520568 - 26520509
Alignment:
Q  90 ttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactc 150  Q
    ||||||| ||||||||| ||||| ||||||||||||| |||||||||||||||||||||||    
T  26520568 ttgaattccctagaattctaaat-cttcaaaatttctcaattaccccatccaaacacactc 26520509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 7669075 - 7669187
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||| ||||| ||||||| ||||||||| ||| ||  ||||||||||||||        || |||||| || |||||||||  |||||||| |||||    
T  7669075 tttattattccattcaaacaagaatatttagaaataaagtcaatttaattgaat--------tttcctagagttctaaattctttgaaatttctcaatta 7669166  T
Q  133 ccccatccaaacacactctaa 153  Q
    |||||||||||||||||||||    
T  7669167 ccccatccaaacacactctaa 7669187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 8469885 - 8469931
Alignment:
Q  88 atttgaattacctagaattataaattcttcaaaatttcttaattacc 134  Q
    ||||||||||||||||||| ||||||||| ||||||||| |||||||    
T  8469885 atttgaattacctagaattctaaattctttaaaatttctcaattacc 8469931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 30444864 - 30444804
Alignment:
Q  93 aattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactctaa 153  Q
    |||| ||||||||| ||||||||| ||||||||  ||||||  ||||||||||||||||||    
T  30444864 aattgcctagaattttaaattctttaaaatttccaaattacttcatccaaacacactctaa 30444804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 36103252 - 36103308
Alignment:
Q  93 aattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacact 149  Q
    |||| ||||||||| ||||||||| ||||||||  ||||||| ||||||||||||||    
T  36103252 aattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacact 36103308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 28190339 - 28190229
Alignment:
Q  43 catccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaa 142  Q
    ||||||||||| |||||| || ||| | || |||||||||||||||||| |||| | ||||||| ||| |||||  ||||||   ||||| | ||| |||    
T  28190339 catccaaacaaaaatattgagaaataagagtaatttaattgaatcatttaaattgcgtagaattctaagttctttcaaattttcgaattatctcattcaa 28190240  T
Q  143 acacactctaa 153  Q
    | |||||||||    
T  28190239 atacactctaa 28190229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 7079780 - 7079821
Alignment:
Q  93 aattacctagaattataaattcttcaaaatttcttaattacc 134  Q
    |||||||||||||| ||||||||| ||||||||| |||||||    
T  7079780 aattacctagaattttaaattctttaaaatttctcaattacc 7079821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 153
Target Start/End: Original strand, 13823458 - 13823499
Alignment:
Q  112 ttcttcaaaatttcttaattaccccatccaaacacactctaa 153  Q
    ||||||||||||||| ||||||  ||||||||||||||||||    
T  13823458 ttcttcaaaatttctcaattacttcatccaaacacactctaa 13823499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 15718587 - 15718640
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaat 86  Q
    ||||||||||||||||||||| | |||| || |||||||| |||| ||||||||    
T  15718587 tttattactccatccaaacaaaagtattgagaaatgaaagtaattaaattgaat 15718640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 26520616 - 26520567
Alignment:
Q  28 ttttgtttattactccatccaaacaataatatttaggaatgaaagcaatt 77  Q
    |||| ||||||||| |||||||||||||| ||||| ||| ||||||||||    
T  26520616 ttttttttattacttcatccaaacaataacatttaagaacgaaagcaatt 26520567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 34390382 - 34390463
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatca-tttgaattacctagaattataaatt 113  Q
    |||||| ||||||| |||||| | |||| || ||| |||| ||||||||||||||| ||| |||| ||||||||| ||||||    
T  34390382 tttatttctccatcaaaacaaaagtattgagaaataaaagtaatttaattgaatcattttaaatttcctagaattctaaatt 34390463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 322
Target Start/End: Original strand, 2487143 - 2487215
Alignment:
Q  250 tagtattgttaatttttatgttgaaagtgaggatcaaactcttgacctacttatcacttcacttcttaactct 322  Q
    ||||||||||| |||||||| |||  ||| ||||| |||  ||||||| ||||||||| |||| |||||||||    
T  2487143 tagtattgttagtttttatgctgagggtggggatcgaacaattgacctccttatcactccactccttaactct 2487215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 6460572 - 6460496
Alignment:
Q  75 atttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    |||| ||||||||||||||||| |||| |||| ||||||||   |||||| ||||||  | |||| |||||||||||    
T  6460572 atttgattgaatcatttgaatttcctaaaattttaaattctattaaattttttaattgtctcatcaaaacacactct 6460496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 10033463 - 10033522
Alignment:
Q  262 tttttatgttgaaagtgaggatcaaactcttgacctacttatcacttcacttcttaactct 322  Q
    ||||||||||||  ||| ||||||| |||||||||| ||||||||| |||| |||||||||    
T  10033463 tttttatgttgagggtggggatcaa-ctcttgacctccttatcactccactccttaactct 10033522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 2e-47; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 33 - 149
Target Start/End: Complemental strand, 7167306 - 7167190
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||    
T  7167306 tttattactccatccaaacaataatatttaagaatgaaagcaatttaattgaatcatttgaattacctagaattctaaattcttcaaaatttctcaaata 7167207  T
Q  133 ccccatccaaacacact 149  Q
    | |||||||||||||||    
T  7167206 ctccatccaaacacact 7167190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 41 - 149
Target Start/End: Complemental strand, 7611529 - 7611421
Alignment:
Q  41 tccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatcc 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||    
T  7611529 tccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattttaaattcttcaaaatttctcaattactccatcc 7611430  T
Q  141 aaacacact 149  Q
    |||||||||    
T  7611429 aaacacact 7611421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 30698694 - 30698832
Alignment:
Q  16 aatatgacaatat-tttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattc 114  Q
    ||||||||||||  ||| |||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||    
T  30698694 aatatgacaataaatttttttattactctatccaaacaataatatttaagaatgaaagcaatttaattaaatcatttgaattacctaaaattctaaattc 30698793  T
Q  115 ttcaaaatttcttaattaccccatccaaacacactctaa 153  Q
    |||||||||||| || ||| |||||||||||||||||||    
T  30698794 ttcaaaatttctcaaatactccatccaaacacactctaa 30698832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 32839306 - 32839188
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||||    
T  32839306 tttattacaccatccaaacaataatatttatgaatgaaagcaatttaattgaatcatttgaattgcctagaattttaaattctttaaaatttctcaatta 32839207  T
Q  133 ccccatccaaacacactct 151  Q
    || |||| |||||||||||    
T  32839206 cctcatctaaacacactct 32839188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 27 - 153
Target Start/End: Original strand, 3092671 - 3092797
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttct 126  Q
    ||||| ||||||||||||||||||||| | ||||||| ||| |||| |||||||||||||||||| |||| ||||||||| ||||||||| |||||||||    
T  3092671 attttttttattactccatccaaacaaaagtatttagaaataaaagtaatttaattgaatcatttaaatttcctagaattctaaattctttaaaatttct 3092770  T
Q  127 taattaccccatccaaacacactctaa 153  Q
     ||||||| ||||||||||||||||||    
T  3092771 caattacctcatccaaacacactctaa 3092797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 45094120 - 45094009
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||       |||||||||||||||||||||||    
T  45094120 tttattacttcatccaaacaataatatttaggaatgaaagcgattgaattgaatcatttgaattacctag-------aattcttcaaaatttcttaatta 45094028  T
Q  133 ccccatccaaacacactct 151  Q
    |||||| ||||||||||||    
T  45094027 ccccattcaaacacactct 45094009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 35047319 - 35047201
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| |  ||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| ||||||||| |||||    
T  35047319 tttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattttaaattctttaaaatttctcaatta 35047220  T
Q  133 ccccatccaaacacactct 151  Q
    |||||||||||||||||||    
T  35047219 ccccatccaaacacactct 35047201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 32839823 - 32839715
Alignment:
Q  43 catccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaa 142  Q
    |||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||  |||||||| ||||||||||||||||||| |||||||||| ||||    
T  32839823 catccaaacaataacatttaagaattaaagcaattgaattgaatcatttgaattctctagaattctaaattcttcaaaatttctcaattaccccacccaa 32839724  T
Q  143 acacactct 151  Q
    ||| |||||    
T  32839723 acaaactct 32839715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 27 - 153
Target Start/End: Original strand, 769457 - 769583
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttct 126  Q
    ||||| ||||||||| ||||||||||| |  ||| |  |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| |||||||||    
T  769457 attttttttattacttcatccaaacaaaagaattgaaaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttct 769556  T
Q  127 taattaccccatccaaacacactctaa 153  Q
     ||||||| ||||||||||||||||||    
T  769557 caattacctcatccaaacacactctaa 769583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 13018176 - 13018294
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||||||||||||| |  ||| || |||||||| ||||||||||||| |||| |||||||||||||| ||||||||| | ||||||| |||||    
T  13018176 tttattactccatccaaacaaaagaattgagaaatgaaagtaatttaattgaattatttaaattacctagaattttaaattctttataatttctcaatta 13018275  T
Q  133 ccccatccaaacacactct 151  Q
    || ||||||||||||||||    
T  13018276 cctcatccaaacacactct 13018294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 14306482 - 14306364
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||||||||||||| | |||| || |||||||||| |||||||||| ||||| ||||  |||||||| ||||||||| ||||||||| |||||    
T  14306482 tttattactccatccaaacaaaagtattgagaaatgaaagcattttaattgaaccattttaattgtctagaattctaaattctttaaaatttctcaatta 14306383  T
Q  133 ccccatccaaacacactct 151  Q
    || ||||||||||||||||    
T  14306382 cctcatccaaacacactct 14306364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 33188913 - 33188787
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttct 126  Q
    ||||| ||||||||| ||||||||||| |  ||| |  |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| |||||||||    
T  33188913 attttttttattacttcatccaaacaaaagaattgaaaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttct 33188814  T
Q  127 taattaccccatccaaacacactctaa 153  Q
     ||||||| ||||||||||||||||||    
T  33188813 caattacctcatccaaacacactctaa 33188787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 1583450 - 1583330
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| |  ||| || |||||||| |||||||| ||||||||| |||| ||||||||| ||||||||| ||||||||| |||||    
T  1583450 tttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaatggaatcatttaaattgcctagaattctaaattctttaaaatttctcaatta 1583351  T
Q  133 ccccatccaaacacactctaa 153  Q
    || ||||||||||||||||||    
T  1583350 cctcatccaaacacactctaa 1583330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 7309554 - 7309434
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| |  ||| || |||||||| |||||||||||||||||| |||| | ||||||| ||||||||| ||||||||| |||||    
T  7309554 tttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcttagaattctaaattctttaaaatttctcaatta 7309455  T
Q  133 ccccatccaaacacactctaa 153  Q
    || ||||||||||||||||||    
T  7309454 cctcatccaaacacactctaa 7309434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 33 - 157
Target Start/End: Original strand, 44256065 - 44256189
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| |  ||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| ||||||||| |||||    
T  44256065 tttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaatta 44256164  T
Q  133 ccccatccaaacacactctaatgtt 157  Q
    || |||||||||| |||||| ||||    
T  44256165 cctcatccaaacatactctattgtt 44256189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 8736083 - 8735965
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||| |||||||||||||| |||||| || |||||||| |||||||||||||||||| |||| | ||| ||| ||||||||| ||||||||  |||||    
T  8736083 tttatttctccatccaaacaaaaatattgagaaatgaaagtaatttaattgaatcatttaaattgcttaggattctaaattctttaaaatttcccaatta 8735984  T
Q  133 ccccatccaaacacactct 151  Q
    || ||||||||||||||||    
T  8735983 cctcatccaaacacactct 8735965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 7227684 - 7227615
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaatt 96  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7227684 attttttttattactccatccaaacaataatatttaagaatgaaagcaatttaattgaatcatttgaatt 7227615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 19231134 - 19231015
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||| || ||||||||||| | |||| || |||||||| |||||||||||||||||| |||| ||||||||| | ||||||| ||||||||| |||||    
T  19231134 tttatttcttcatccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattct-aattctttaaaatttctcaatta 19231036  T
Q  133 ccccatccaaacacactctaa 153  Q
    || ||||||||||||||||||    
T  19231035 cctcatccaaacacactctaa 19231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 39630657 - 39630777
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| |||||||| || |  ||| || |||||||| |||||||||||||||||| |||| ||||||||| |||||| || ||||||||| |||||    
T  39630657 tttattacttcatccaaataaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattttaaattttttaaaatttctcaatta 39630756  T
Q  133 ccccatccaaacacactctaa 153  Q
    || ||||||||||||||||||    
T  39630757 cctcatccaaacacactctaa 39630777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 28021824 - 28021706
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| | |||| || ||| |||||| |||||||||||||||||||||  | |||||| ||||||||| ||||||||| |||||    
T  28021824 tttattactacatccaaacaaaagtattgagaaataaaagcattttaattgaatcatttgaattgtcaagaattctaaattctttaaaatttctcaatta 28021725  T
Q  133 ccccatccaaacacactct 151  Q
     | ||||||||||||||||    
T  28021724 gctcatccaaacacactct 28021706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 153
Target Start/End: Original strand, 17906067 - 17906193
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttct 126  Q
    ||||| |||||||||||||| |||||| |  ||| || |||||||| ||||||||||||| |||| ||||| ||| |||| ||||||||| | ||||| |    
T  17906067 attttttttattactccatctaaacaaaagaattgagaaatgaaagtaatttaattgaattatttaaattatctataattttaaattctttataattttt 17906166  T
Q  127 taattaccccatccaaacacactctaa 153  Q
     ||||||| ||||||||||||||||||    
T  17906167 caattacctcatccaaacacactctaa 17906193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 2925085 - 2925202
Alignment:
Q  36 attactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccc 135  Q
    ||||||||||| |||||| | |||| || ||||||| || ||||| |||||||||| |||| ||||||||| ||||||||| ||||||||  ||||||      
T  2925085 attactccatcaaaacaaaagtattgagaaatgaaaacattttaaatgaatcatttaaattgcctagaattctaaattctttaaaatttcccaattactt 2925184  T
Q  136 catccaaacacactctaa 153  Q
    ||||||||||||||||||    
T  2925185 catccaaacacactctaa 2925202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 6749500 - 6749618
Alignment:
Q  19 atgacaata-ttttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttc 117  Q
    ||||||||| |||| ||||||||| |||||||||||||| ||||| |||||||| ||||| ||||||||         | ||||||||| ||||||||||    
T  6749500 atgacaataattttttttattacttcatccaaacaataacatttaagaatgaaaacaattgaattgaat---------tccctagaattctaaattcttc 6749590  T
Q  118 aaaatttcttaattaccccatccaaaca 145  Q
    ||||||||| ||||||||||||||||||    
T  6749591 aaaatttctcaattaccccatccaaaca 6749618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 33 - 154
Target Start/End: Complemental strand, 41585312 - 41585191
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| |  ||| || |||||||| ||||||| |||||||||| ||||  | |||||| ||||||||| ||||||| | |||||    
T  41585312 tttattacttcatccaaacaaaataattgagaaatgaaagtaatttaaatgaatcatttaaattgtcaagaattctaaattctttaaaatttatcaatta 41585213  T
Q  133 ccccatccaaacacactctaat 154  Q
    || |||||||| ||||||||||    
T  41585212 cctcatccaaagacactctaat 41585191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 33 - 149
Target Start/End: Original strand, 11141736 - 11141852
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| |  ||| || |||||||  |||||||| ||||||||| ||||  |||| ||| ||||||||| ||||||||| |||||    
T  11141736 tttattacttcatccaaacaaaagaattaagaaatgaaattaatttaatggaatcatttaaattgtctaggattctaaattctttaaaatttctcaatta 11141835  T
Q  133 ccccatccaaacacact 149  Q
    || ||||||||||||||    
T  11141836 cctcatccaaacacact 11141852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 33 - 125
Target Start/End: Original strand, 11595236 - 11595328
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttc 125  Q
    |||| ||||||| |||||||| | |||| || |||||||| |||||||||||||||||| |||||| ||||||| ||||||||| ||||||||    
T  11595236 tttaatactccaaccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattacttagaattctaaattctttaaaatttc 11595328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 33 - 149
Target Start/End: Original strand, 21504881 - 21504997
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||| |||||||||||||||| | |||| || |||| ||| ||||||||| || ||||| |||| | ||||||| ||||||||| ||||||||  |||||    
T  21504881 tttactactccatccaaacaaaattattgagaaatgcaagtaatttaattaaaacatttaaattgcttagaattctaaattctttaaaatttcccaatta 21504980  T
Q  133 ccccatccaaacacact 149  Q
    || ||||||||||||||    
T  21504981 cctcatccaaacacact 21504997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 19072305 - 19072382
Alignment:
Q  76 tttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactctaa 153  Q
    |||| ||||||||||| |||||||||| ||| ||||||||| ||||||||| ||||| | ||||||||||||||||||    
T  19072305 tttacttgaatcatttaaattacctaggattctaaattctttaaaatttctcaattatctcatccaaacacactctaa 19072382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 125
Target Start/End: Original strand, 11607138 - 11607230
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttc 125  Q
    |||| |||| || |||||||| | |||| || |||||||| |||||||||||||||||| |||||| ||||||| ||||||||| ||||||||    
T  11607138 tttaatactgcaaccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattacttagaattctaaattctttaaaatttc 11607230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 30265768 - 30265855
Alignment:
Q  39 actccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttct 126  Q
    |||| ||| |||||| ||||||||| ||||||  |||||||||| ||||||||||||| | ||||||| ||||||||| |||||||||    
T  30265768 actctatcaaaacaaaaatatttagaaatgaagacaatttaatttaatcatttgaattgcttagaattctaaattctttaaaatttct 30265855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 29278702 - 29278619
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttca 118  Q
    |||| |||||||||||||||| ||||||||| |  ||||||||||||||||| |||||| ||||  |||||||| |||||||||||    
T  29278702 tttactactccatccaaacaaaaatatttagaa--gaaagcaatttaattgattcattttaattgtctagaattctaaattcttca 29278619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 19193861 - 19193746
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||||||||||||| | |||| || |||||||| ||||||||  || ||||| |||| |||| |||| ||| || || |||||||   |||||    
T  19193861 tttattactccatccaaacaaaagtattgagaaatgaaagtaatttaatcaaaacatttaaattgcctaaaattttaatttttttaaaattttccaatta 19193762  T
Q  133 ccccatccaaacacac 148  Q
    || |||||||||||||    
T  19193761 cctcatccaaacacac 19193746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 2274419 - 2274335
Alignment:
Q  41 tccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttc 125  Q
    ||||||||||||| ||| || || ||||||  ||||||||||||||||||| ||||  ||| ||||||||||| || ||||||||    
T  2274419 tccatccaaacaagaattttgagaaatgaagtcaatttaattgaatcatttaaattgtctaaaattataaattatttaaaatttc 2274335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 31704001 - 31703921
Alignment:
Q  73 caatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactctaa 153  Q
    ||||||||||||||||||||||||  |||||||| |||||| |  |||||||   ||||||| ||| ||||||||||||||    
T  31704001 caatttaattgaatcatttgaattgactagaattctaaattatctaaaattttccaattacctcattcaaacacactctaa 31703921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 151
Target Start/End: Original strand, 31941413 - 31941505
Alignment:
Q  59 tttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    ||||| ||| || ||||||||||||||| |||||||||  ||| |||| ||||||||| ||||||| | ||||||| | || |||||||||||    
T  31941413 tttagaaataaatgcaatttaattgaataatttgaattgtctataattctaaattcttgaaaatttatcaattacctcgtcaaaacacactct 31941505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 7227618 - 7227577
Alignment:
Q  110 aattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  7227618 aattcttcaaaatttcttaaatactccatccaaacacactct 7227577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 3271393 - 3271461
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaat 95  Q
    ||||| |||||||||  ||||| |||| ||||||||| |||||| | |||| |||||||||||||||||    
T  3271393 attttttttattactttatccacacaaaaatatttagaaatgaaggaaattcaattgaatcatttgaat 3271461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 3e-40; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 16516589 - 16516716
Alignment:
Q  19 atgacaatattttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttca 118  Q
    ||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||     ||||||||||||||||| |||||| |||||||||||    
T  16516589 atgacaataatttttttattacttcatccaaacaataatatttaggaatgaaagcaatt-----gaatcatttgaattaccaagaattctaaattcttca 16516683  T
Q  119 aaatttcttaattaccccatccaaacacactct 151  Q
    |||||||| ||||||| ||||||||||||||||    
T  16516684 aaatttctcaattacctcatccaaacacactct 16516716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 19 - 153
Target Start/End: Original strand, 54566589 - 54566724
Alignment:
Q  19 atgacaata-ttttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttc 117  Q
    ||||||||| |||| ||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||||| ||| ||||| ||||||| |     
T  54566589 atgacaataattttttttattacttcatccaaacaataacatttaagaatgaaagcaattgaattgaatcatttgaattcccttgaattttaaattcatt 54566688  T
Q  118 aaaatttcttaattaccccatccaaacacactctaa 153  Q
    ||||||||| ||||||||||||||||||||||||||    
T  54566689 aaaatttctcaattaccccatccaaacacactctaa 54566724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 24705760 - 24705880
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| |||||||||||||| |||||  ||||||||||||| |||||||||||||||||| |||| |||| ||||||||||||||||| | |||||    
T  24705760 tttattacttcatccaaacaataacatttaaaaatgaaagcaattgaattgaatcatttgaattccctaaaattctaaattcttcaaaatttttcaatta 24705859  T
Q  133 ccccatccaaacacactctaa 153  Q
    |||||||||||||||||||||    
T  24705860 ccccatccaaacacactctaa 24705880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 42775904 - 42775780
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttct 126  Q
    ||||| ||||||||||||||||||||| | ||||||| |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| |||||||||    
T  42775904 attttttttattactccatccaaacaaaagtatttagaaatgaaagtaatttaattgaatcatttaaatttcctagaattctaaattctttaaaatttct 42775805  T
Q  127 taattaccccatccaaacacactct 151  Q
     ||||||| ||||||||||||||||    
T  42775804 caattacctcatccaaacacactct 42775780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 30303544 - 30303668
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttct 126  Q
    ||||| ||||||||||||||||||||| ||||||||| |||||| | | ||||||||||||||||||||| ||||||||| ||||||||| |||||||||    
T  30303544 attttttttattactccatccaaacaaaaatatttagaaatgaaggtagtttaattgaatcatttgaattgcctagaattttaaattctttaaaatttct 30303643  T
Q  127 taattaccccatccaaacacactct 151  Q
     ||||| | ||||||||||||||||    
T  30303644 caattatctcatccaaacacactct 30303668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 2126268 - 2126386
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| |  ||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| ||||||||| |||||    
T  2126268 tttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaatta 2126367  T
Q  133 ccccatccaaacacactct 151  Q
    |||||||||||||||||||    
T  2126368 ccccatccaaacacactct 2126386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 147
Target Start/End: Complemental strand, 53760452 - 53760328
Alignment:
Q  13 aagaatatgacaatattt-tgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaa 111  Q
    |||| ||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||    
T  53760452 aagattatgacaatatttgtttttatttctccatccaaacaataatatttaggaatgaaagcaatttaattgaa-----------acctagaattataaa 53760364  T
Q  112 ttcttcaaaatttcttaattaccccatccaaacaca 147  Q
    ||||||||||||||| |||||| |||||||||||||    
T  53760363 ttcttcaaaatttctcaattactccatccaaacaca 53760328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 46242740 - 46242620
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||||||||||||| |||||| |  |||||||| ||||||||| |||||||| |||| | ||||||||||||||||| ||||||||  |||||    
T  46242740 tttattactccatccaaacaaaaatattgaaaaatgaaagtaatttaattcaatcatttaaattgcttagaattataaattctttaaaatttcccaatta 46242641  T
Q  133 ccccatccaaacacactctaa 153  Q
    || ||||||||||||||||||    
T  46242640 cctcatccaaacacactctaa 46242620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 40547891 - 40547768
Alignment:
Q  28 ttttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttctt 127  Q
    |||| ||||||||| ||||||||||| |  ||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| |||||||||     
T  40547891 ttttttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattttaaattctttaaaatttctc 40547792  T
Q  128 aattaccccatccaaacacactct 151  Q
    ||||||| ||||||||||||||||    
T  40547791 aattacctcatccaaacacactct 40547768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 47108650 - 47108765
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||||||||||||| |||||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| |||||||   |||||    
T  47108650 tttattactccatccaaacaaaaatattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaattttccaatta 47108749  T
Q  133 ccccatccaaacacac 148  Q
    || |||||||||||||    
T  47108750 cctcatccaaacacac 47108765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 35470549 - 35470672
Alignment:
Q  28 ttttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttctt 127  Q
    |||| ||||||||| ||||||||||| |  ||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| |||||||||     
T  35470549 ttttttttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctc 35470648  T
Q  128 aattaccccatccaaacacactct 151  Q
    ||||||  ||||||||||||||||    
T  35470649 aattacatcatccaaacacactct 35470672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 33 - 149
Target Start/End: Complemental strand, 46242284 - 46242169
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| | |||| || | ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| ||| ||||||    
T  46242284 tttattacttcatccaaacaaaagtattgagaagtgaaagcaatttaattgaatcatttaaattatctagaattctaaattcttcaaaa-ttcctaatta 46242186  T
Q  133 ccccatccaaacacact 149  Q
    |  ||||||||||||||    
T  46242185 cttcatccaaacacact 46242169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 21782403 - 21782521
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| | |||| || |||||||| | |||||| ||||||||||||||  |||||||| ||||||||| ||||||||  |||||    
T  21782403 tttattactacatccaaacaaaagtattaagaaatgaaagtattttaatggaatcatttgaattgtctagaattctaaattctttaaaatttcacaatta 21782502  T
Q  133 ccccatccaaacacactct 151  Q
    || ||||||||||||||||    
T  21782503 cctcatccaaacacactct 21782521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 17727841 - 17727962
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttctt-aatt 131  Q
    ||||||| ||||||||||||| ||||||||| ||||||  |||||||||||||| ||||||||| | ||||||| ||||||||||||||    || ||||    
T  17727841 tttattattccatccaaacaagaatatttagaaatgaagtcaatttaattgaataatttgaattgcttagaattctaaattcttcaaaaaaaattcaatt 17727940  T
Q  132 accccatccaaacacactctaa 153  Q
    ||| ||||||||||||||||||    
T  17727941 acctcatccaaacacactctaa 17727962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 28751862 - 28751742
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||  || ||| |  |||||||| |||||||||||||||||| |||| |||| |||| |||||| || ||||||||| |||||    
T  28751862 tttattacttcatccaaacacaaaaattgaaaaatgaaagtaatttaattgaatcatttaaattgcctataattctaaattttttaaaatttctcaatta 28751763  T
Q  133 ccccatccaaacacactctaa 153  Q
     | ||||||||||||||||||    
T  28751762 tctcatccaaacacactctaa 28751742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 26534912 - 26535011
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttct 126  Q
    ||||| ||||| ||||||||||||||| | |||| |  |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| |||||||||    
T  26534912 attttttttatcactccatccaaacaaaagtattgaaaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttct 26535011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 43 - 153
Target Start/End: Original strand, 41139912 - 41140022
Alignment:
Q  43 catccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaa 142  Q
    ||||||||||| | |||| || |||||||  |||||||||||||||||| |||| | ||||||| ||||||||| ||||||||| ||||||  | |||||    
T  41139912 catccaaacaaaagtattgagaaatgaaaataatttaattgaatcatttaaattgcttagaattttaaattctttaaaatttctcaattacttcttccaa 41140011  T
Q  143 acacactctaa 153  Q
    |||||||||||    
T  41140012 acacactctaa 41140022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 33 - 150
Target Start/End: Complemental strand, 27284338 - 27284221
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| || ||| || |||||||| |||||||||||| ||||| |||| ||||||||| ||||||||| |||||||   |||||    
T  27284338 tttattacttcatccaaacaaaaaaattgagaaatgaaagtaatttaattgaaccatttaaattgcctagaattctaaattctttaaaattttcaaatta 27284239  T
Q  133 ccccatccaaacacactc 150  Q
       |||||||||||||||    
T  27284238 tatcatccaaacacactc 27284221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 42776515 - 42776630
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||| |||||||||||||| |||||| |  |||||||| |||| ||||||||||||| |||| | ||| ||| ||||||||| |||||||   |||||    
T  42776515 tttatttctccatccaaacaaaaatattgaaaaatgaaagtaattgaattgaatcatttaaattgcttaggattctaaattctttaaaattttccaatta 42776614  T
Q  133 ccccatccaaacacac 148  Q
    || |||||||||||||    
T  42776615 cctcatccaaacacac 42776630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 150
Target Start/End: Complemental strand, 56118293 - 56118170
Alignment:
Q  27 attttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttct 126  Q
    ||||| ||||||||||||||||||||| |  ||| || ||| |||| ||||||||| |||||||| |||| ||||||||| | | ||||  ||||||| |    
T  56118293 attttttttattactccatccaaacaaaagaattgagaaataaaagtaatttaattaaatcatttaaattgcctagaattctgagttctctaaaatttgt 56118194  T
Q  127 taattaccccatccaaacacactc 150  Q
     ||||||| |||||||||||||||    
T  56118193 caattacctcatccaaacacactc 56118170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 29685711 - 29685650
Alignment:
Q  35 tattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaatt 96  Q
    ||||||||||||||||||| ||||||||| | |||| |||||||||||||||||||||||||    
T  29685711 tattactccatccaaacaaaaatatttagaagtgaatgcaatttaattgaatcatttgaatt 29685650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 41 - 148
Target Start/End: Complemental strand, 5579761 - 5579654
Alignment:
Q  41 tccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatcc 140  Q
    |||||||||| || | |||| || |||||||| |||||||||||||||||| ||||   | ||||| |||||||||||||||||  |||||||| ||| |    
T  5579761 tccatccaaataaaagtattgagaaatgaaaggaatttaattgaatcatttaaattgtttggaattttaaattcttcaaaattttctaattacctcattc 5579662  T
Q  141 aaacacac 148  Q
    ||||||||    
T  5579661 aaacacac 5579654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 84 - 151
Target Start/End: Original strand, 29091606 - 29091673
Alignment:
Q  84 aatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    ||||||||||||| ||||||||| |||||| |||||||||||| || ||||| |||||||||||||||    
T  29091606 aatcatttgaattccctagaattctaaatttttcaaaatttctcaaataccctatccaaacacactct 29091673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 115
Target Start/End: Complemental strand, 16299895 - 16299813
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattct 115  Q
    ||||||||| ||||||||||| |||||| |  | |||||| |||||||||||||||||| ||||| |||||||| ||||||||    
T  16299895 tttattactgcatccaaacaaaaatattgataactgaaagtaatttaattgaatcatttaaattaactagaattttaaattct 16299813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 9449528 - 9449410
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||| ||||||||| |||||| ||||||||| |  ||||||||||||||||| |||||| ||||  |||||||| | ||||||||| ||    | |||||    
T  9449528 tttactactccatctaaacaaaaatatttagaa--gaaagcaatttaattgattcattttaattgtctagaattctgaattcttcacaaaaaatcaatta 9449431  T
Q  133 ccccatccaaacacactctaa 153  Q
    || ||||||||||||||||||    
T  9449430 cctcatccaaacacactctaa 9449410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 31948003 - 31948091
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaa 121  Q
    |||||||||||| |||||||| | |||| || |||||| | |||||||||||||||||| |||| |||| |||| ||||||||| ||||    
T  31948003 tttattactccacccaaacaaaagtattgagaaatgaatggaatttaattgaatcatttaaattgcctaaaattttaaattctttaaaa 31948091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 56339549 - 56339608
Alignment:
Q  84 aatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaa 143  Q
    |||||||||||||||||| |||| ||||||||||||||||||| |||||| || ||||||    
T  56339549 aatcatttgaattacctataattctaaattcttcaaaatttctcaattactccctccaaa 56339608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 10633183 - 10633244
Alignment:
Q  93 aattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactctaat 154  Q
    |||| ||||||||| ||||||||| ||||||||  ||||||| |||||||||||||||||||    
T  10633183 aattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaat 10633244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 13088432 - 13088344
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaa 121  Q
    ||||||||| || ||| | || ||||||||| ||| ||| |||||||||| ||||||||||||| |||| |||| |||||| |||||||    
T  13088432 tttattacttcacccatataaaaatatttagaaataaaaacaatttaattaaatcatttgaattgcctaaaattctaaattattcaaaa 13088344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 13318319 - 13318216
Alignment:
Q  46 ccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaaca 145  Q
    |||||||| | |||| || |||||||| |||||||||||||||||| |||| | || || | ||||||||| ||||||||| || |||  ||||||||||    
T  13318319 ccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattccata-aaatctaaattctttaaaatttctcaaatacatcatccaaaca 13318221  T
Q  146 cactc 150  Q
    |||||    
T  13318220 cactc 13318216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 21012491 - 21012436
Alignment:
Q  99 ctagaattataaattcttcaaaatttcttaattaccccatccaaacacactctaat 154  Q
    |||||||| ||||||||| ||||||| | ||||||| |||||||||||||||||||    
T  21012491 ctagaattttaaattctttaaaatttttaaattacctcatccaaacacactctaat 21012436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 31474007 - 31474059
Alignment:
Q  99 ctagaattataaattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    |||||||| ||||||||| ||||||||  ||||||| ||||||||||||||||    
T  31474007 ctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 31474059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 24934621 - 24934570
Alignment:
Q  44 atccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaat 95  Q
    |||||||||| ||||||||| ||| |||| |||||||||||| |||||||||    
T  24934621 atccaaacaaaaatatttagcaataaaagtaatttaattgaagcatttgaat 24934570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 73 - 151
Target Start/End: Complemental strand, 19461344 - 19461266
Alignment:
Q  73 caatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    ||||||||||||||||| | |||| |||| |||| ||||||||| ||||  |  |||||||| ||| ||||||||||||    
T  19461344 caatttaattgaatcatctaaattgcctaaaattttaaattctttaaaaaattctaattacctcattcaaacacactct 19461266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 17727508 - 17727564
Alignment:
Q  65 aatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaa 121  Q
    |||||||| |||||||||||||||||| |||||||   |||| ||||||||| ||||    
T  17727508 aatgaaagtaatttaattgaatcatttaaattaccctaaattctaaattctttaaaa 17727564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 41983368 - 41983416
Alignment:
Q  103 aattataaattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    |||| ||||||||| ||||||||| ||||| ||||| ||||||||||||    
T  41983368 aattctaaattctttaaaatttctcaattatcccattcaaacacactct 41983416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 4138 - 4020
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||  | | || ||    
T  4138 tttattactccatccaaacaataatatttaagaatgaaagcaatttaattgaatcatttgaataacctagaattctaaattcttcaaaaaatttcaaata 4039  T
Q  133 ccccatccaaacacactct 151  Q
    | |||||||||||||||||    
T  4038 ctccatccaaacacactct 4020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 4782 - 4664
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||  | | || ||    
T  4782 tttattactccatccaaacaataatatttaagaatgaaagcaatttaattgaatcatttgaataacctagaattctaaattcttcaaaaaatttcaaata 4683  T
Q  133 ccccatccaaacacactct 151  Q
    | |||||||||||||||||    
T  4682 ctccatccaaacacactct 4664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 49970 - 49838
Alignment:
Q  18 tatgacaatattttgtt-tattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattctt 116  Q
    |||||||||||||  || |||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||  |||| |||||||||    
T  49970 tatgacaatatttgtttctatttctccatccaaacaataatatttaggaatgaaattaatttaattgaatcatttgagttaccttaaattctaaattctt 49871  T
Q  117 caaaatttcttaattaccccatccaaacacact 149  Q
    |||||||||| |||||| |||||||||||||||    
T  49870 caaaatttctcaattactccatccaaacacact 49838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 7e-38; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 15833022 - 15833154
Alignment:
Q  18 tatgacaatattttgttt-attactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattctt 116  Q
    |||||||||||||| ||| ||| || ||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||| |||| | |||||||    
T  15833022 tatgacaatattttttttgatttctacatccaaactataatatttaagaatgaaagcaatttaattaaatcatttgaattacctaaaattctgaattctt 15833121  T
Q  117 caaaatttcttaattaccccatccaaacacact 149  Q
    |||||||||| |||||| |||||||||||||||    
T  15833122 caaaatttctcaattactccatccaaacacact 15833154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 33 - 149
Target Start/End: Original strand, 31413291 - 31413407
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| |||||||||||||| ||||| |||| ||||||| | |||| ||||||||||||| ||||||||| ||||||||||||||||||| |||||    
T  31413291 tttattacttcatccaaacaataacatttaagaattaaagcaactgaatttaatcatttgaattccctagaattctaaattcttcaaaatttctcaatta 31413390  T
Q  133 ccccatccaaacacact 149  Q
    |||||||||||||||||    
T  31413391 ccccatccaaacacact 31413407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 15616038 - 15615918
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||||||||||||| |||||| || |||||||| ||||||||||| ||||||||||| ||||  ||| ||||||||| ||||||| | |||||    
T  15616038 tttattactccatccaaacaaaaatattgagaaatgaaagtaatttaattgattcatttgaattgcctaatattttaaattctttaaaatttatcaatta 15615939  T
Q  133 ccccatccaaacacactctaa 153  Q
    || ||||||||||||||||||    
T  15615938 cctcatccaaacacactctaa 15615918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 1368902 - 1369025
Alignment:
Q  28 ttttgtttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttctt 127  Q
    |||| ||||||||||||||||||||| |  ||| || |||||||| |||||||||||||||||| |||||||||||||| ||||||||| | |||||||     
T  1368902 ttttttttattactccatccaaacaaaagaattcagaaatgaaagtaatttaattgaatcatttaaattacctagaattttaaattctttataatttctc 1369001  T
Q  128 aattaccccatccaaacacactct 151  Q
    ||||||| | ||||||||||||||    
T  1369002 aattacctcgtccaaacacactct 1369025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 6357943 - 6357823
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||||||| |||||||||| | |||| || |||||||  |||||||||||||||||| |||||| || |||| ||||||||||||||||||  |||||    
T  6357943 tttattactctatccaaacaaaagtattaagaaatgaaaataatttaattgaatcatttaaattacttaaaattctaaattcttcaaaatttcccaatta 6357844  T
Q  133 ccccatccaaacacactctaa 153  Q
    || | ||||||||||||||||    
T  6357843 cctcgtccaaacacactctaa 6357823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 33 - 152
Target Start/End: Original strand, 8475560 - 8475679
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||||||  |||||||||| |  ||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| ||||||||| |||||    
T  8475560 tttattactttatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaatta 8475659  T
Q  133 ccccatccaaacacactcta 152  Q
    || |||| ||||||||||||    
T  8475660 cctcatctaaacacactcta 8475679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 724907 - 724809
Alignment:
Q  55 aatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactctaa 153  Q
    |||||| || |||||||||| ||| ||| ||||||||||||||||||||||| ||||||||| |||| |||| ||||||| ||||||||||||||||||    
T  724907 aatattgagaaatgaaagcattttcatttaatcatttgaattacctagaattctaaattcttaaaaaattctcaattacctcatccaaacacactctaa 724809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 10105439 - 10105555
Alignment:
Q  35 tattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattacc 134  Q
    |||||||| |||||||||| | |||| || ||||||| || ||||||||||||||| ||||| |||| || | ||||||||| ||||||||| |||||||    
T  10105439 tattactcaatccaaacaaaagtattgagaaatgaaatcattttaattgaatcattggaattgcctacaagtctaaattctttaaaatttctcaattacc 10105538  T
Q  135 ccatccaaacacactct 151  Q
     ||||||||||||||||    
T  10105539 tcatccaaacacactct 10105555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 1195771 - 1195855
Alignment:
Q  69 aaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactctaa 153  Q
    |||||||||||||||||| |||| |||| |||||||||  |||||||  ||||||||| ||||||| ||| ||||||||||||||    
T  1195771 aaagcaatttaattgaattatttaaattgcctagaatttcaaattctctaaaatttctcaattacctcattcaaacacactctaa 1195855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 133
Target Start/End: Original strand, 28918588 - 28918688
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||||||||||||||| |  ||| |  |||||||| |||||||||||||||||| |||| | ||||||| |||||| || | ||||||| |||||    
T  28918588 tttattactccatccaaacaaaagaattgaaaaatgaaagtaatttaattgaatcatttaaattgcatagaattttaaattatttataatttctcaatta 28918687  T
Q  133 c 133  Q
    |    
T  28918688 c 28918688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 153
Target Start/End: Original strand, 9697874 - 9697939
Alignment:
Q  88 atttgaattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactctaa 153  Q
    |||| ||||| ||| |||| ||||||||| ||||||||| |||||| |||||||||||||||||||    
T  9697874 atttaaattatctaaaattctaaattctttaaaatttctcaattactccatccaaacacactctaa 9697939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 26901449 - 26901384
Alignment:
Q  41 tccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaatt 106  Q
    ||||||||||||| ||||||||| || ||||  |||||| |||||||||||||||| |||||||||    
T  26901449 tccatccaaacaaaaatatttagaaaagaaaaaaatttatttgaatcatttgaattgcctagaatt 26901384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 151
Target Start/End: Complemental strand, 34244901 - 34244843
Alignment:
Q  93 aattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    |||| ||||||||| ||||||||| ||||||||  ||||||| ||||||||||||||||    
T  34244901 aattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 34244843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 13487433 - 13487485
Alignment:
Q  99 ctagaattataaattcttcaaaatttcttaattaccccatccaaacacactct 151  Q
    |||||||| ||||||||| ||||||||  ||||||| ||||||||||||||||    
T  13487433 ctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 13487485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 153
Target Start/End: Original strand, 34364896 - 34364956
Alignment:
Q  93 aattacctagaattataaattcttcaaaatttcttaattaccccatccaaacacactctaa 153  Q
    |||| ||||||||| ||||||||| |||||||   ||||||| ||||||||||||||||||    
T  34364896 aattgcctagaattttaaattctttaaaattttcaaattacctcatccaaacacactctaa 34364956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 33 - 126
Target Start/End: Complemental strand, 16055 - 15962
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttct 126  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  16055 tttattactcaatccaaacaataatatttaagaatgaaagcaatttaattgaatcatttaaattacctagaattctaaattcttcaaaatttct 15962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 134
Target Start/End: Complemental strand, 15604 - 15503
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||||||||| |||||||| | |||  || |||||||| ||||| |||||||||||| |||   |||||||| ||||||||| ||||||||  |||||    
T  15604 tttattactccacccaaacaaaagtatcgagaaatgaaaggaattttattgaatcatttaaatagtctagaattttaaattctttaaaatttcacaatta 15505  T
Q  133 cc 134  Q
    ||    
T  15504 cc 15503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 3288 - 3406
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| | |||| || |||||||| |||||||||||||||||| ||||| ||| |||| ||||||||| ||||||||| |||||    
T  3288 tttattacttcatccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattaactaaaattctaaattctttaaaatttctcaatta 3387  T
Q  133 ccccatccaaacacactct 151  Q
    || |||||||| |||||||    
T  3388 cctcatccaaagacactct 3406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 4453 - 4570
Alignment:
Q  36 attactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattaccc 135  Q
    |||||||||||||||||| | |||| || |||||||||| ||||| |||||||||| |||| ||||||||| ||||||||| ||||||||  |||||       
T  4453 attactccatccaaacaaaagtattgagaaatgaaagcattttaaatgaatcatttaaattgcctagaattctaaattctttaaaatttcccaattagtt 4552  T
Q  136 catccaaacacactctaa 153  Q
    ||||||||||||||||||    
T  4553 catccaaacacactctaa 4570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 33 - 134
Target Start/End: Original strand, 7583 - 7684
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    ||||||||| ||||||||||| |  ||| || |||||||| |||||||||||||||||| |||| ||||||||| ||||||||| ||||||||| |||||    
T  7583 tttattacttcatccaaacaaaagaattgagaaatgaaagtaatttaattgaatcatttaaattgcctagaattctaaattctttaaaatttctcaatta 7682  T
Q  133 cc 134  Q
    ||    
T  7683 cc 7684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 19425 - 19333
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttc 125  Q
    ||||||||||||||||||||| | |||| || |||||||| |||||||||||||||||| |||| |||| |||| ||||||||| ||||||||    
T  19425 tttattactccatccaaacaaaagtattgagaaatgaaagtaatttaattgaatcatttaaattgcctaaaattctaaattctttaaaatttc 19333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 35 - 148
Target Start/End: Complemental strand, 11612 - 11499
Alignment:
Q  35 tattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaattacc 134  Q
    |||||||||||| |||||| | |||| |  |||||||| ||||||||| |||||||| |||||| ||||||| ||||||||| |||||||   || ||||    
T  11612 tattactccatctaaacaaaagtattgacaaatgaaagtaatttaattaaatcatttaaattacttagaattctaaattctttaaaattttccaaatacc 11513  T
Q  135 ccatccaaacacac 148  Q
     |||||||||||||    
T  11512 tcatccaaacacac 11499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 3057 - 3004
Alignment:
Q  73 caatttaattgaatcatttgaattacctagaattataaattcttcaaaatttct 126  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  3057 caatttaattgaatcatttaaattacctagaattctaaattcttcaaaatttct 3004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 134
Target Start/End: Complemental strand, 2646 - 2545
Alignment:
Q  33 tttattactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaatttcttaatta 132  Q
    |||||||||||| |||||||| | |||  || |||||||| ||||| |||||||||||| |||   |||||||| ||||||||| ||||||||  |||||    
T  2646 tttattactccacccaaacaaaagtatcgagaaatgaaaggaattttattgaatcatttaaatagtctagaattttaaattctttaaaatttcacaatta 2547  T
Q  133 cc 134  Q
    ||    
T  2546 cc 2545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 130682 - 130770
Alignment:
Q  36 attactccatccaaacaataatatttaggaatgaaagcaatttaattgaatcatttgaattacctagaattataaattcttcaaaattt 124  Q
    ||||||||||| |||||| ||||||||  ||| | || |||||||||||||||||| ||||  ||| |||| |||||||||||||||||    
T  130682 attactccatcgaaacaaaaatatttaaaaataacagaaatttaattgaatcatttaaattggctaaaattctaaattcttcaaaattt 130770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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