View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20249_high_4 (Length: 256)
Name: NF20249_high_4
Description: NF20249
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20249_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 28 - 225
Target Start/End: Complemental strand, 37093428 - 37093237
Alignment:
| Q |
28 |
taataagtgatttgtttttagttaaaacgaatcttgtttataggatcttcatacatnnnnnnnnnnnnnnnnnnntagattatcatcaattataattcca |
127 |
Q |
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| T |
37093428 |
taataagtgatttgtttttagttaaaacgaatcttgtttataggatcttcatacataaaaagaaaaaaaaaaa--tagattatcatcaattataattcca |
37093331 |
T |
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| Q |
128 |
cttcatgtttaatcactagcttatatatagtagcattttgagaaaataagccaaatttaactttgacctcacaataattagagatataatatcatggt |
225 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
37093330 |
cttcatgtttaatcactagcttata----gtagcattttgagaaaataagccaaatttaactttgacctcacaataattagagatataatctcatggt |
37093237 |
T |
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