View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20249_low_12 (Length: 228)

Name: NF20249_low_12
Description: NF20249
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20249_low_12
NF20249_low_12
[»] chr8 (58 HSPs)
chr8 (53-227)||(23638179-23638357)
chr8 (55-227)||(24622641-24622817)
chr8 (1-45)||(16487609-16487653)
chr8 (3-47)||(37392147-37392191)
chr8 (3-43)||(39211054-39211094)
chr8 (7-46)||(1068604-1068643)
chr8 (7-46)||(2730995-2731034)
chr8 (7-46)||(5772006-5772045)
chr8 (7-50)||(26026890-26026933)
chr8 (7-46)||(33107901-33107940)
chr8 (7-46)||(34435771-34435810)
chr8 (1-43)||(895935-895977)
chr8 (7-44)||(5601021-5601058)
chr8 (7-44)||(5639562-5639599)
chr8 (7-48)||(5740808-5740849)
chr8 (7-44)||(7598708-7598745)
chr8 (3-44)||(9047089-9047130)
chr8 (3-48)||(30439524-30439569)
chr8 (7-43)||(10839516-10839552)
chr8 (7-47)||(26629144-26629184)
chr8 (7-51)||(41273508-41273552)
chr8 (7-46)||(5771910-5771949)
chr8 (7-46)||(7678730-7678769)
chr8 (7-46)||(20288531-20288570)
chr8 (7-46)||(21075160-21075199)
chr8 (11-46)||(28772162-28772197)
chr8 (7-46)||(30170763-30170802)
chr8 (3-46)||(30925673-30925716)
chr8 (3-46)||(41541867-41541910)
chr8 (5-47)||(888277-888319)
chr8 (7-45)||(4671990-4672028)
chr8 (3-45)||(5502370-5502412)
chr8 (7-45)||(5849600-5849638)
chr8 (1-43)||(9630136-9630178)
chr8 (8-46)||(13885773-13885811)
chr8 (7-48)||(4658297-4658338)
chr8 (7-44)||(4721729-4721766)
chr8 (7-44)||(12659052-12659089)
chr8 (7-44)||(13106477-13106514)
chr8 (121-225)||(17624771-17624876)
chr8 (7-44)||(25987821-25987858)
chr8 (1-46)||(29107993-29108038)
chr8 (7-44)||(30943873-30943910)
chr8 (7-44)||(34018808-34018845)
chr8 (5-46)||(36874131-36874172)
chr8 (3-48)||(42996485-42996530)
chr8 (3-47)||(324113-324157)
chr8 (8-44)||(1065417-1065453)
chr8 (7-47)||(7376503-7376543)
chr8 (8-48)||(22852874-22852914)
chr8 (7-47)||(24479233-24479272)
chr8 (3-43)||(32020484-32020524)
chr8 (3-43)||(32954853-32954893)
chr8 (7-47)||(33100503-33100543)
chr8 (7-47)||(35500987-35501027)
chr8 (7-47)||(41293755-41293795)
chr8 (7-47)||(43066628-43066668)
chr8 (7-43)||(44061718-44061754)
[»] scaffold0123 (1 HSPs)
scaffold0123 (65-224)||(33199-33353)
[»] chr6 (26 HSPs)
chr6 (51-168)||(6777791-6777913)
chr6 (7-46)||(17551413-17551452)
chr6 (3-48)||(28748120-28748165)
chr6 (7-48)||(31517203-31517244)
chr6 (7-44)||(33712320-33712357)
chr6 (2-46)||(1897695-1897739)
chr6 (3-47)||(12588400-12588444)
chr6 (7-43)||(24900776-24900812)
chr6 (7-47)||(31883338-31883378)
chr6 (3-46)||(1196056-1196099)
chr6 (7-46)||(8505808-8505847)
chr6 (7-45)||(9954547-9954585)
chr6 (7-49)||(15666807-15666849)
chr6 (3-44)||(1286923-1286964)
chr6 (7-44)||(2056783-2056820)
chr6 (7-48)||(9188978-9189019)
chr6 (7-44)||(11635569-11635606)
chr6 (1-46)||(12427244-12427289)
chr6 (7-44)||(18065124-18065161)
chr6 (7-48)||(29383553-29383594)
chr6 (3-44)||(32644623-32644664)
chr6 (7-47)||(1156718-1156757)
chr6 (3-47)||(5028284-5028328)
chr6 (7-47)||(22079598-22079637)
chr6 (7-47)||(33421757-33421797)
chr6 (7-43)||(35077124-35077160)
[»] chr1 (47 HSPs)
chr1 (7-46)||(9987949-9987988)
chr1 (7-46)||(27742615-27742654)
chr1 (3-46)||(45272179-45272222)
chr1 (7-46)||(48858821-48858860)
chr1 (7-46)||(48983702-48983741)
chr1 (7-46)||(50148944-50148983)
chr1 (3-45)||(4857921-4857963)
chr1 (7-45)||(9566995-9567033)
chr1 (7-44)||(19947775-19947812)
chr1 (3-44)||(48872047-48872088)
chr1 (3-52)||(51571407-51571456)
chr1 (7-47)||(15083085-15083124)
chr1 (7-47)||(24806256-24806296)
chr1 (3-47)||(33358177-33358221)
chr1 (3-47)||(50781588-50781632)
chr1 (7-46)||(4213070-4213109)
chr1 (3-46)||(8200085-8200128)
chr1 (3-46)||(14983782-14983825)
chr1 (7-46)||(35529414-35529453)
chr1 (3-46)||(40596073-40596116)
chr1 (3-46)||(43612099-43612142)
chr1 (3-46)||(49453489-49453532)
chr1 (6-44)||(7919095-7919133)
chr1 (7-49)||(33100803-33100844)
chr1 (3-45)||(48220162-48220204)
chr1 (3-45)||(49241523-49241565)
chr1 (3-47)||(110744-110786)
chr1 (7-44)||(649768-649805)
chr1 (7-48)||(6829817-6829858)
chr1 (7-52)||(10435832-10435877)
chr1 (3-44)||(11597648-11597689)
chr1 (7-48)||(11947791-11947832)
chr1 (7-48)||(27687542-27687583)
chr1 (3-44)||(40139126-40139167)
chr1 (7-44)||(40439874-40439911)
chr1 (3-44)||(41507213-41507254)
chr1 (3-48)||(44632536-44632581)
chr1 (7-44)||(47642641-47642678)
chr1 (7-47)||(3826838-3826878)
chr1 (7-47)||(10890080-10890120)
chr1 (8-44)||(13813558-13813594)
chr1 (3-43)||(19969580-19969620)
chr1 (7-47)||(24774972-24775012)
chr1 (7-47)||(37843466-37843506)
chr1 (3-47)||(42539415-42539459)
chr1 (3-43)||(45065920-45065960)
chr1 (7-47)||(50226913-50226953)
[»] chr4 (56 HSPs)
chr4 (7-45)||(50721779-50721817)
chr4 (7-44)||(32012896-32012933)
chr4 (3-43)||(5386385-5386425)
chr4 (7-47)||(51255743-51255783)
chr4 (7-46)||(7632496-7632535)
chr4 (3-45)||(42490919-42490961)
chr4 (7-44)||(5932798-5932835)
chr4 (8-45)||(19473979-19474016)
chr4 (3-44)||(39241320-39241361)
chr4 (7-44)||(44925164-44925201)
chr4 (1-45)||(2109442-2109486)
chr4 (4-44)||(10147089-10147129)
chr4 (3-47)||(28657459-28657503)
chr4 (3-47)||(46173547-46173591)
chr4 (8-48)||(51717317-51717357)
chr4 (7-46)||(5208361-5208400)
chr4 (3-46)||(43769721-43769764)
chr4 (7-46)||(50831790-50831829)
chr4 (11-46)||(54000696-54000731)
chr4 (7-45)||(1796365-1796403)
chr4 (7-45)||(2004223-2004261)
chr4 (65-139)||(12458619-12458692)
chr4 (1-43)||(28676169-28676211)
chr4 (3-45)||(31657657-31657699)
chr4 (3-45)||(32621637-32621679)
chr4 (2-44)||(37547065-37547107)
chr4 (3-45)||(39605978-39606019)
chr4 (3-45)||(41119500-41119542)
chr4 (7-45)||(45082980-45083017)
chr4 (7-45)||(48494935-48494973)
chr4 (7-45)||(51377327-51377365)
chr4 (7-45)||(55268035-55268073)
chr4 (3-44)||(1840595-1840636)
chr4 (7-44)||(7037518-7037555)
chr4 (7-48)||(14010152-14010193)
chr4 (7-44)||(14443198-14443235)
chr4 (7-44)||(23220335-23220372)
chr4 (7-48)||(23369367-23369407)
chr4 (7-44)||(24045244-24045281)
chr4 (8-45)||(27001444-27001481)
chr4 (3-44)||(30778283-30778324)
chr4 (3-44)||(32365686-32365727)
chr4 (7-48)||(42853935-42853976)
chr4 (14-51)||(50506386-50506423)
chr4 (7-44)||(56215605-56215642)
chr4 (7-47)||(4896534-4896574)
chr4 (4-44)||(12387685-12387725)
chr4 (7-47)||(20118778-20118818)
chr4 (7-43)||(21014055-21014091)
chr4 (14-46)||(22813751-22813783)
chr4 (1-41)||(29974344-29974384)
chr4 (1-45)||(30973596-30973640)
chr4 (7-47)||(37297046-37297085)
chr4 (16-48)||(44539732-44539764)
chr4 (3-43)||(45143691-45143731)
chr4 (3-43)||(45152460-45152500)
[»] scaffold0054 (1 HSPs)
scaffold0054 (3-48)||(31619-31664)
[»] chr2 (44 HSPs)
chr2 (3-48)||(27695977-27696021)
chr2 (9-53)||(7485450-7485494)
chr2 (7-46)||(1352386-1352425)
chr2 (3-46)||(28013965-28014008)
chr2 (7-46)||(37731234-37731273)
chr2 (3-48)||(3012864-3012909)
chr2 (1-46)||(39430663-39430708)
chr2 (7-47)||(14871844-14871884)
chr2 (7-47)||(29168722-29168762)
chr2 (3-47)||(29795444-29795488)
chr2 (7-47)||(38821363-38821403)
chr2 (3-46)||(694278-694321)
chr2 (7-62)||(1052530-1052585)
chr2 (10-45)||(2308359-2308394)
chr2 (3-46)||(6646833-6646876)
chr2 (3-46)||(8482251-8482294)
chr2 (3-46)||(19695710-19695753)
chr2 (7-46)||(27490765-27490803)
chr2 (7-46)||(28481779-28481818)
chr2 (3-46)||(42081046-42081089)
chr2 (7-45)||(18510674-18510712)
chr2 (7-45)||(37966366-37966404)
chr2 (7-45)||(43057063-43057101)
chr2 (7-48)||(3299139-3299180)
chr2 (7-48)||(3585622-3585663)
chr2 (1-46)||(4263881-4263925)
chr2 (7-44)||(11965793-11965830)
chr2 (7-44)||(15123970-15124007)
chr2 (7-44)||(15260307-15260344)
chr2 (7-44)||(24727624-24727661)
chr2 (7-44)||(25507255-25507292)
chr2 (7-44)||(25801836-25801873)
chr2 (7-44)||(30487503-30487540)
chr2 (11-44)||(36587506-36587539)
chr2 (3-44)||(37737996-37738036)
chr2 (9-46)||(40504222-40504259)
chr2 (1-46)||(42283267-42283312)
chr2 (3-44)||(45202151-45202192)
chr2 (7-44)||(45376255-45376292)
chr2 (7-47)||(14876954-14876994)
chr2 (7-47)||(33296105-33296145)
chr2 (3-47)||(33737352-33737396)
chr2 (7-47)||(39737720-39737760)
chr2 (1-41)||(44422981-44423021)
[»] chr7 (44 HSPs)
chr7 (7-47)||(12007220-12007260)
chr7 (3-46)||(26749015-26749057)
chr7 (7-46)||(47448824-47448863)
chr7 (7-45)||(2008892-2008930)
chr7 (11-45)||(44649364-44649398)
chr7 (3-45)||(45420079-45420121)
chr7 (7-44)||(32777741-32777778)
chr7 (11-48)||(37352106-37352143)
chr7 (3-47)||(22330650-22330694)
chr7 (5-45)||(35293127-35293167)
chr7 (3-47)||(41985119-41985163)
chr7 (3-46)||(2469701-2469744)
chr7 (7-46)||(30864451-30864490)
chr7 (7-46)||(31274563-31274602)
chr7 (7-46)||(33845040-33845079)
chr7 (3-46)||(37352009-37352052)
chr7 (7-46)||(37392041-37392080)
chr7 (7-46)||(38344758-38344797)
chr7 (7-46)||(48395246-48395285)
chr7 (7-45)||(10656631-10656669)
chr7 (7-45)||(13152592-13152629)
chr7 (7-45)||(22195164-22195202)
chr7 (1-47)||(28862098-28862144)
chr7 (2-44)||(47391344-47391385)
chr7 (3-44)||(8459614-8459655)
chr7 (7-48)||(13729722-13729763)
chr7 (7-44)||(22605359-22605396)
chr7 (1-46)||(26041319-26041364)
chr7 (7-44)||(28109957-28109994)
chr7 (1-46)||(34992352-34992397)
chr7 (9-42)||(35072398-35072431)
chr7 (9-42)||(35098739-35098772)
chr7 (3-48)||(41989761-41989805)
chr7 (3-44)||(43444635-43444676)
chr7 (7-44)||(49069249-49069286)
chr7 (3-43)||(3062343-3062383)
chr7 (7-47)||(4971287-4971327)
chr7 (3-43)||(7817650-7817690)
chr7 (7-47)||(9055264-9055304)
chr7 (3-47)||(11352992-11353036)
chr7 (45-97)||(19065593-19065644)
chr7 (7-43)||(23910285-23910321)
chr7 (7-43)||(37325853-37325889)
chr7 (7-47)||(37856188-37856228)
[»] chr5 (39 HSPs)
chr5 (7-46)||(13089816-13089855)
chr5 (3-46)||(14206398-14206441)
chr5 (3-41)||(21210833-21210871)
chr5 (7-44)||(4719650-4719687)
chr5 (7-44)||(21155987-21156024)
chr5 (7-52)||(32872932-32872977)
chr5 (7-47)||(1274355-1274394)
chr5 (7-47)||(11148508-11148548)
chr5 (7-47)||(18660756-18660795)
chr5 (3-46)||(13734379-13734422)
chr5 (3-46)||(14923081-14923123)
chr5 (7-46)||(27487885-27487924)
chr5 (7-45)||(844035-844073)
chr5 (3-45)||(6865806-6865848)
chr5 (7-45)||(9594477-9594515)
chr5 (7-45)||(17097836-17097874)
chr5 (130-172)||(20846449-20846491)
chr5 (3-45)||(31683514-31683556)
chr5 (3-45)||(39458667-39458709)
chr5 (7-45)||(42446325-42446363)
chr5 (7-45)||(43057434-43057472)
chr5 (7-44)||(2629818-2629855)
chr5 (7-44)||(3263542-3263579)
chr5 (1-46)||(5007748-5007793)
chr5 (7-48)||(7076421-7076461)
chr5 (7-48)||(8097245-8097286)
chr5 (7-44)||(8728615-8728652)
chr5 (7-44)||(9599762-9599799)
chr5 (7-44)||(12718414-12718451)
chr5 (7-44)||(12779640-12779677)
chr5 (7-44)||(26754672-26754709)
chr5 (7-44)||(30574411-30574448)
chr5 (9-46)||(35075612-35075649)
chr5 (7-44)||(41621962-41621999)
chr5 (7-51)||(1293120-1293164)
chr5 (7-47)||(19376166-19376206)
chr5 (7-47)||(22647595-22647635)
chr5 (8-48)||(23991169-23991209)
chr5 (3-43)||(33910107-33910147)
[»] chr3 (34 HSPs)
chr3 (7-45)||(28700471-28700509)
chr3 (7-45)||(32362932-32362970)
chr3 (1-47)||(44937216-44937262)
chr3 (7-48)||(3069608-3069649)
chr3 (51-104)||(3295128-3295180)
chr3 (1-45)||(11056939-11056983)
chr3 (3-47)||(55361252-55361296)
chr3 (7-46)||(32146020-32146059)
chr3 (7-46)||(34456788-34456827)
chr3 (7-46)||(36818954-36818993)
chr3 (1-48)||(43883309-43883356)
chr3 (3-46)||(46952947-46952990)
chr3 (3-50)||(47683795-47683842)
chr3 (3-46)||(49761317-49761360)
chr3 (12-46)||(4140613-4140647)
chr3 (145-227)||(4655559-4655641)
chr3 (7-45)||(9862532-9862570)
chr3 (7-45)||(10811134-10811172)
chr3 (8-46)||(20714241-20714279)
chr3 (7-45)||(32931952-32931990)
chr3 (7-45)||(36869871-36869909)
chr3 (10-48)||(49457561-49457599)
chr3 (3-45)||(50876381-50876423)
chr3 (7-44)||(25188499-25188536)
chr3 (3-48)||(29846910-29846955)
chr3 (7-44)||(32457789-32457826)
chr3 (7-48)||(43169776-43169817)
chr3 (7-48)||(48405406-48405447)
chr3 (3-48)||(52564664-52564709)
chr3 (3-47)||(3483129-3483173)
chr3 (7-47)||(32008030-32008070)
chr3 (3-43)||(53871051-53871091)
chr3 (1-45)||(54195350-54195394)
chr3 (7-43)||(55151751-55151786)
[»] scaffold0347 (1 HSPs)
scaffold0347 (130-226)||(3787-3879)
[»] scaffold0128 (1 HSPs)
scaffold0128 (7-46)||(10934-10973)
[»] scaffold0110 (1 HSPs)
scaffold0110 (7-46)||(28361-28400)
[»] scaffold0100 (1 HSPs)
scaffold0100 (3-46)||(44784-44827)
[»] scaffold0034 (1 HSPs)
scaffold0034 (7-46)||(101940-101979)
[»] scaffold0014 (1 HSPs)
scaffold0014 (119-221)||(201995-202098)
[»] scaffold0299 (1 HSPs)
scaffold0299 (51-117)||(10333-10398)
[»] scaffold0194 (1 HSPs)
scaffold0194 (5-47)||(29793-29835)
[»] scaffold0098 (1 HSPs)
scaffold0098 (16-48)||(49291-49323)
[»] scaffold0020 (1 HSPs)
scaffold0020 (7-47)||(165470-165509)


Alignment Details
Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 53 - 227
Target Start/End: Original strand, 23638179 - 23638357
Alignment:
Q  53 ttcatgcataggacatatacatactcaacaatccgtagaatactaacatcacgtgaacattatctccaatacaa-----attatgttatcatatttatat 147  Q
    ||||||||||  |||||||||||||||||| ||| ||||||||||| ||| | |||| |||||| ||||| | |     || ||| ||||| | || |||    
T  23638179 ttcatgcatatcacatatacatactcaacattcc-tagaatactaatatctcatgaatattatccccaattccatatacatcatgctatcaaaattctat 23638277  T
Q  148 catagaacatcaagcatattcattcttcaatcaaattatcaacagaatacatcacttaacaatatcaatcaatataagaa 227  Q
    ||||| ||||||||||||||||| ||| |||||||| ||||||| | |||||||||||| ||||||||||||||||||||    
T  23638278 catagcacatcaagcatattcatcctttaatcaaatcatcaacaaagtacatcacttaataatatcaatcaatataagaa 23638357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 227
Target Start/End: Original strand, 24622641 - 24622817
Alignment:
Q  55 catgcataggacatatacatactcaacaatccgtagaatactaacatcacgtgaacattatctccaat---aca--aattatgttatcatatttatatca 149  Q
    ||||||||| |||||||||||||||||| ||| |||||||||| |||||| |  | |||||| ||| |   |||  ||| | ||||||||| || |||||    
T  24622641 catgcatagtacatatacatactcaacattcc-tagaatactaccatcacatatatattatccccagttcgacattaatcaggttatcatacttctatca 24622739  T
Q  150 tagaacatcaagcatattcattcttcaatcaaattatcaacagaatacatcacttaacaatatcaatcaatataagaa 227  Q
    ||| | ||||||||||||||  ||| |||||||| |||||||    |||||||||||||| |||||||| ||||||||    
T  24622740 tagcatatcaagcatattcaccctttaatcaaatcatcaacaaggcacatcacttaacaacatcaatcattataagaa 24622817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16487653 - 16487609
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||    
T  16487653 aaagagaaagttgtcataaaatggttgttcaaatatcatttctct 16487609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 37392147 - 37392191
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||    
T  37392147 agagaaagttgtcaaaaaatggttgtacaaatatcatttctctta 37392191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 39211094 - 39211054
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  39211094 agagaaagttgtcaaaaaatggttgttcaaatatcatttct 39211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 1068643 - 1068604
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  1068643 aaagttgtcaaaaagtggttgttcaaatatcatttctctt 1068604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 2730995 - 2731034
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  2730995 aaagttgtcaaaaagtggttgttcaaatatcatttctctt 2731034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 5772006 - 5772045
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  5772006 aaagttgtcaaaaaatggttgttcaaatatcatttctctt 5772045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 26026933 - 26026890
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaaga 50  Q
    |||||||||||||| ||||||||||||||||||||||| |||||    
T  26026933 aaagttgtcaaaaaatggttgttcaaatatcatttctcataaga 26026890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 33107901 - 33107940
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  33107901 aaagttgtcaaaaagtggttgttcaaatatcatttctctt 33107940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 34435771 - 34435810
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  34435771 aaagttgtcaaaaagtggttgttcaaatatcatttctctt 34435810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 895977 - 895935
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||||||||||||||||| ||||||| ||||||||||||||    
T  895977 aaagagaaagttgtcaaaaagtggttgtacaaatatcatttct 895935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 5601021 - 5601058
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| |||||||||||||||||||||||    
T  5601021 aaagttgtcaaaaaatggttgttcaaatatcatttctc 5601058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 5639599 - 5639562
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| |||||||||||||||||||||||    
T  5639599 aaagttgtcaaaaaatggttgttcaaatatcatttctc 5639562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 5740808 - 5740849
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||||||||| ||||||| |||||||||||||||||||    
T  5740808 aaagttgtcaaaaagtggttgtacaaatatcatttctcttaa 5740849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 7598745 - 7598708
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| |||||||||||||||||||||||    
T  7598745 aaagttgtcaaaaaatggttgttcaaatatcatttctc 7598708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 9047089 - 9047130
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||||||| ||||||| |||||||||||||||    
T  9047089 agagaaagttgtcaaaaagtggttgtacaaatatcatttctc 9047130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 30439524 - 30439569
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||||    
T  30439524 agagaaagttgtcacaaaatggatgttcaaatatcatttctcttaa 30439569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 10839516 - 10839552
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||||| ||||||||||||||||||||||||||||    
T  10839516 aaagttgttaaaaattggttgttcaaatatcatttct 10839552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 26629144 - 26629184
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||| ||||||| ||||||||||||||||||    
T  26629144 aaagttgtcaaaaagtggttgtacaaatatcatttctctta 26629184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 41273552 - 41273508
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaagaa 51  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||    
T  41273552 aaagttgtcacaaattgtttgtacaaatatcatttctcttaagaa 41273508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 5771910 - 5771949
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  5771910 aaagttgtcacaaaatggttgttcaaatatcatttctctt 5771949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 7678769 - 7678730
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  7678769 aaagttgtcaaaaagtggttgtacaaatatcatttctctt 7678730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 20288570 - 20288531
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  20288570 aaagttgtcacaaattggttgtacaaatatcatttctctt 20288531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 21075199 - 21075160
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  21075199 aaagttgtcacaaattggttgtacaaatatcatttctctt 21075160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 28772162 - 28772197
Alignment:
Q  11 ttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||| |||||||||||||||||||||||||    
T  28772162 ttgtcaaaaaatggttgttcaaatatcatttctctt 28772197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 30170763 - 30170802
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  30170763 aaagttgtcaaaaagtggttgtacaaatatcatttctctt 30170802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 30925673 - 30925716
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| |||| |||||| |||||||||||||||||    
T  30925673 agagaaagttgtcataaatcggttgtccaaatatcatttctctt 30925716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 41541910 - 41541867
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||    
T  41541910 agagaaagttgtcacaaaatggatgttcaaatatcatttctctt 41541867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 888277 - 888319
Alignment:
Q  5 agaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||| ||||||| |||| |||||||||||||||||    
T  888277 agaaagttgtcacaaattggatgtttaaatatcatttctctta 888319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 4672028 - 4671990
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  4672028 aaagttgtcaaaaaatggttgttcaaatatcgtttctct 4671990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 5502412 - 5502370
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||    
T  5502412 agagaaagttgtcacaaagtggttgtacaaatatcatttctct 5502370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 5849600 - 5849638
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  5849600 aaagttatcaaaaaatggttgttcaaatatcatttctct 5849638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9630178 - 9630136
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||||||||||| ||||| || |||||||||||||||||||    
T  9630178 aaagagaaagttgttaaaaaatgattgttcaaatatcatttct 9630136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 13885811 - 13885773
Alignment:
Q  8 aagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  13885811 aagttgtcaaaaattggttatacaaatatcatttctctt 13885773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 4658297 - 4658338
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||||| ||| ||| |||||||||||||||||||||||    
T  4658297 aaagttgtcataaaatggatgttcaaatatcatttctcttaa 4658338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 4721766 - 4721729
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  4721766 aaagttgtcaaaatttggttgtacaaatatcatttctc 4721729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 12659089 - 12659052
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  12659089 aaagttgttaaaaattggttgtacaaatatcatttctc 12659052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 13106514 - 13106477
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  13106514 aaagttgtccaaaaatggttgttcaaatatcatttctc 13106477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 17624876 - 17624771
Alignment:
Q  121 atacaaattatgttatcatatttatatcatagaacatcaagcatattcattcttcaa-tcaaattatcaacagaatacatcacttaacaatatcaatcaa 219  Q
    ||||| || ||| ||||| | |||||| | || |||||||||||||||||  || || |||||| |||||||   ||||||||||||||| ||||| |||    
T  17624876 atacacatcatgctatcacaattatattagagtacatcaagcatattcatcatttaaatcaaatcatcaacacggtacatcacttaacaacatcaaccaa 17624777  T
Q  220 tataag 225  Q
    ||||||    
T  17624776 tataag 17624771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 25987821 - 25987858
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  25987821 aaagttgtaaaaaaatggttgttcaaatatcatttctc 25987858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29108038 - 29107993
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||||| || |||| |||||||||||||||||    
T  29108038 aaagagaaagttgttaaaaaatgattgtacaaatatcatttctctt 29107993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 30943873 - 30943910
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  30943873 aaagttgttaaaaattggttgtacaaatatcatttctc 30943910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 34018845 - 34018808
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  34018845 aaagttgtcagaaaatggttgttcaaatatcatttctc 34018808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 36874131 - 36874172
Alignment:
Q  5 agaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    ||||| |||||||||| | |||||||||||||||||||||||    
T  36874131 agaaaattgtcaaaaaattgttgttcaaatatcatttctctt 36874172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 42996530 - 42996485
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    ||||||||||| || ||| ||||||| |||||||||||||||||||    
T  42996530 agagaaagttgacagaaagtggttgtacaaatatcatttctcttaa 42996485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 324113 - 324157
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||||||| ||| ||| || |||||||||||||||    
T  324113 agagaaagttgtcaaaaagtggatgtacatatatcatttctctta 324157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 1065453 - 1065417
Alignment:
Q  8 aagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  1065453 aagttgtcacaaattggttgtacaaatatcatttctc 1065417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 7376543 - 7376503
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||| | ||||||||||| ||||||||||||||||||    
T  7376543 aaagttgttagaaattggttgtacaaatatcatttctctta 7376503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 22852874 - 22852914
Alignment:
Q  8 aagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    ||||||||| ||| ||||||| |||||||||||||||||||    
T  22852874 aagttgtcacaaagtggttgtacaaatatcatttctcttaa 22852914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 24479272 - 24479233
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  24479272 aaagttatcaaaaat-ggttgttcaaatatcatttctctta 24479233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 32020484 - 32020524
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||||||| ||||||| ||||||| ||||||||||||||    
T  32020484 agagaaagttatcaaaaaatggttgtacaaatatcatttct 32020524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 32954893 - 32954853
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||||||||||| ||| ||| ||||||||||||||||||    
T  32954893 agagaaagttgtcacaaaatggatgttcaaatatcatttct 32954853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 33100503 - 33100543
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||| | ||| ||||||||||||||||||||||||||    
T  33100503 aaagttgttataaaatggttgttcaaatatcatttctctta 33100543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 35500987 - 35501027
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||| |||||||  |||||||||||||||||    
T  35500987 aaagttgtcaaaaagtggttgtataaatatcatttctctta 35501027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 41293755 - 41293795
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||| |||||||||||  |||||||||||||||||    
T  41293755 aaagttgtcacaaattggttgtaaaaatatcatttctctta 41293795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 43066628 - 43066668
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||| ||||| ||||||| ||||||||||||||||||    
T  43066628 aaagttgttaaaaagtggttgtacaaatatcatttctctta 43066668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 44061754 - 44061718
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  44061754 aaagttatcaaaaaatggttgttcaaatatcatttct 44061718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 224
Target Start/End: Original strand, 33199 - 33353
Alignment:
Q  65 acatatacatactcaacaatccgtagaatactaacatcacgtgaacattatctccaatacaaattatgttatcatatttatatcatagaacatcaagcat 164  Q
    |||||||||||||||  | ||| |||||||||||||||||  ||||||||     |||| |||| |||||||||||||| ||||||||   |||||||||    
T  33199 acatatacatactcattactcc-tagaatactaacatcacaagaacatta-----aatataaatcatgttatcatatttctatcatagcttatcaagcat 33292  T
Q  165 attcattcttcaatcaaattatcaacagaat-acatcacttaacaatatcaatcaatataa 224  Q
    |||| |||||  ||||||  |||| || |||   |||||||||||| ||||||||||||||    
T  33293 attcgttcttatatcaaagcatcatcaaaatcttatcacttaacaacatcaatcaatataa 33353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 168
Target Start/End: Original strand, 6777791 - 6777913
Alignment:
Q  51 atttcatgcataggacatatacatactcaacaatccgtagaatactaacatcacgtgaacattatc------tccaatacaaattatgttatcatattta 144  Q
    ||||||||||||| ||||||||||||||||||| || |||| ||||||| |||| |||| ||||||      | |||| ||||| ||||||||||| ||     
T  6777791 atttcatgcatagcacatatacatactcaacaa-ccctagattactaacttcacatgaatattatcttcaaattcaattcaaatcatgttatcatacttc 6777889  T
Q  145 tatcatagaacatcaagcatattc 168  Q
    ||||| || |||||||||||||||    
T  6777890 tatcaaagcacatcaagcatattc 6777913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 17551413 - 17551452
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  17551413 aaagttgtcaaaaaatggttgttcaaatatcatttctctt 17551452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 28748165 - 28748120
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||||    
T  28748165 agagaaagttgtcacaaaatggatgttcaaatatcatttctcttaa 28748120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 31517203 - 31517244
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||||||||| ||||||| |||||||||||||||||||    
T  31517203 aaagttgtcaaaaagtggttgtacaaatatcatttctcttaa 31517244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 33712357 - 33712320
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| |||||||||||||||||||||||    
T  33712357 aaagttgtcaaaaagtggttgttcaaatatcatttctc 33712320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 1897739 - 1897695
Alignment:
Q  2 aagagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||||    
T  1897739 aagagaaagttgtcataaagtggttgtacaaatatcatttctctt 1897695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 12588400 - 12588444
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    ||||||| |||||||||||||||||||||||||| |||| |||||    
T  12588400 agagaaaattgtcaaaaattggttgttcaaatattatttttctta 12588444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 24900812 - 24900776
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||||||||||| ||||||||||||||||||||||    
T  24900812 aaagttgtcaaaaaatggttgttcaaatatcatttct 24900776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 31883338 - 31883378
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||| ||||||| ||||||||||||||||||    
T  31883338 aaagttgtcaaaaagtggttgtacaaatatcatttctctta 31883378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 1196099 - 1196056
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||||||| || |||| |||||||||||||||||    
T  1196099 agagaaagttgtcaaaaagtgattgtacaaatatcatttctctt 1196056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 8505808 - 8505847
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| || ||||||||||||||||||||||    
T  8505808 aaagttgtcaaaaaatgattgttcaaatatcatttctctt 8505847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 9954585 - 9954547
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  9954585 aaagttgtcacaaattggttgtacaaatatcatttctct 9954547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 15666807 - 15666849
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaag 49  Q
    |||||||||| ||| ||||||| ||||||||||||||||||||    
T  15666807 aaagttgtcagaaaatggttgtacaaatatcatttctcttaag 15666849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 1286964 - 1286923
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||||||| |  ||||||||||||||||||||    
T  1286964 agagaaagttgtcaaaaaataattgttcaaatatcatttctc 1286923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 2056820 - 2056783
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  2056820 aaagttgtcacaaattggttgtacaaatatcatttctc 2056783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 9188978 - 9189019
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||| ||||| ||||||| |||||||||||||||||||    
T  9188978 aaagttgttaaaaaatggttgtacaaatatcatttctcttaa 9189019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 11635569 - 11635606
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| || ||||||||||||||||||||    
T  11635569 aaagttgtcaaaaaatgattgttcaaatatcatttctc 11635606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12427244 - 12427289
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    ||||||||||||||| |||| ||| ||| |||||||||||||||||    
T  12427244 aaagagaaagttgtcgaaaagtggatgtacaaatatcatttctctt 12427289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 18065124 - 18065161
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| || ||||||||||||||||||||    
T  18065124 aaagttgtcaaaaagtgattgttcaaatatcatttctc 18065161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 29383594 - 29383553
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||||| ||| ||||||| |||||||||||||||||||    
T  29383594 aaagttgtcagaaagtggttgtacaaatatcatttctcttaa 29383553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 32644664 - 32644623
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||||||| | ||||| |||||||||||||||    
T  32644664 agagaaagttgtcaaaaaatagttgtacaaatatcatttctc 32644623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 1156757 - 1156718
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  1156757 aaagttgtaaaaaat-ggttgttcaaatatcatttctctta 1156718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 5028284 - 5028328
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||| ||| ||| |||| |||||||||||||||||    
T  5028284 agagaaagttgtcacaaaatggatgtttaaatatcatttctctta 5028328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 22079598 - 22079637
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  22079598 aaagttgtaaaaaat-ggttgttcaaatatcatttctctta 22079637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 33421797 - 33421757
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  33421797 aaagttgtcacaaaatggatgttcaaatatcatttctctta 33421757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 35077160 - 35077124
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||||||||||| | ||||||||||||||||||||    
T  35077160 aaagttgtcaaaaaattgttgttcaaatatcatttct 35077124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 9987988 - 9987949
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9987988 aaagttgtcaaaaattggttgttcaaatatcatttctctt 9987949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 27742654 - 27742615
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  27742654 aaagttgtcaaaaagtggttgttcaaatatcatttctctt 27742615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 45272179 - 45272222
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||||||| ||||||| |||||||||||||||||    
T  45272179 agagaaagttgtcaaaaagtggttgtacaaatatcatttctctt 45272222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 48858860 - 48858821
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  48858860 aaagttgtcaaaaagtggttgttcaaatatcatttctctt 48858821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 48983702 - 48983741
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  48983702 aaagttgtcaaaaaatggttgttcaaatatcatttctctt 48983741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 50148983 - 50148944
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  50148983 aaagttgtcaaaaattggttgttcaaatatcgtttctctt 50148944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 4857963 - 4857921
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||||||| || |||||||||||||||||||||    
T  4857963 agagaaagttgtcaaaaagtgattgttcaaatatcatttctct 4857921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 9566995 - 9567033
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  9566995 aaagttgtcaaaaaatggttgttcaaatatcatttctct 9567033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 19947775 - 19947812
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| |||||||||||||||||||||||    
T  19947775 aaagttgtcaaaaaatggttgttcaaatatcatttctc 19947812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 48872047 - 48872088
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||||||| ||||||| |||||||||||||||    
T  48872047 agagaaagttgtcaaaaaatggttgtacaaatatcatttctc 48872088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 51571456 - 51571407
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctcttaagaat 52  Q
    |||||||||||||||||| ||||||| ||||||||||||||  |||||||    
T  51571456 agagaaagttgtcaaaaagtggttgtacaaatatcatttcttgtaagaat 51571407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 15083085 - 15083124
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  15083085 aaagttgtcaaaaat-ggttgttcaaatatcatttctctta 15083124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 24806256 - 24806296
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  24806256 aaagttgtcaaaaagtggttattcaaatatcatttctctta 24806296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 33358177 - 33358221
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||||    
T  33358177 agagaaagttgtcacaaaatggatgttcaaatatcatttctctta 33358221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 50781588 - 50781632
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||||    
T  50781588 agagaaagttgtcataaaatggatgttcaaatatcatttctctta 50781632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 4213109 - 4213070
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||| ||||||| |||||||||||||||||||||||||    
T  4213109 aaagttatcaaaaaatggttgttcaaatatcatttctctt 4213070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 8200128 - 8200085
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||    
T  8200128 agagaaagttgtcacaaaatggatgttcaaatatcatttctctt 8200085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 14983825 - 14983782
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||    
T  14983825 agagaaagttgttaaaaagtggttgtacaaatatcatttctctt 14983782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 35529414 - 35529453
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  35529414 aaagttgtctaaaatcggttgttcaaatatcatttctctt 35529453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 40596073 - 40596116
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||    
T  40596073 agagaaagttgtcacaaaatggttgtacaaatatcatttctctt 40596116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 43612099 - 43612142
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||    
T  43612099 agagaaagttgtcataaaatggttgtacaaatatcatttctctt 43612142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 49453532 - 49453489
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||    
T  49453532 agagaaagttgtcacaaagtggttgtacaaatatcatttctctt 49453489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 7919095 - 7919133
Alignment:
Q  6 gaaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  7919095 gaaagttatcaaaaattgattgttcaaatatcatttctc 7919133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 33100844 - 33100803
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaag 49  Q
    |||||||| |||||| |||||||||||||||||||||||||||    
T  33100844 aaagttgtaaaaaat-ggttgttcaaatatcatttctcttaag 33100803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 48220162 - 48220204
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  48220162 agagaaagttgtcacaaaatggatgttcaaatatcatttctct 48220204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 49241523 - 49241565
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  49241523 agagaaagttgtcacaaagtggatgttcaaatatcatttctct 49241565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 110786 - 110744
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||    
T  110786 agagaaagttgtcaaaaat--gttgtacaaatatcatttctctta 110744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 649805 - 649768
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  649805 aaagttgtaaaaaaatggttgttcaaatatcatttctc 649768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 6829817 - 6829858
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||||| ||||| ||||| |||||||||||||||||||    
T  6829817 aaagttgtcacaaattagttgtacaaatatcatttctcttaa 6829858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 10435832 - 10435877
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaagaat 52  Q
    |||||||||| ||| ||||||| | |||||||||||||||||||||    
T  10435832 aaagttgtcacaaaatggttgtacgaatatcatttctcttaagaat 10435877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 11597689 - 11597648
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| ||||||||||| || ||||||||||||    
T  11597689 agagaaagttgtcacaaattggttgtacagatatcatttctc 11597648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 11947832 - 11947791
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||||| ||| ||||||| |||||||||||||||||||    
T  11947832 aaagttgtcataaaatggttgtacaaatatcatttctcttaa 11947791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 27687542 - 27687583
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||||| ||| ||||||| |||||||||||||||||||    
T  27687542 aaagttgtcacaaaatggttgtacaaatatcatttctcttaa 27687583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 40139167 - 40139126
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| ||| ||||||| |||||||||||||||    
T  40139167 agagaaagttgtcataaaatggttgtacaaatatcatttctc 40139126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 40439874 - 40439911
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  40439874 aaagttgtcaaaaaatggttgttcaagtatcatttctc 40439911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 41507213 - 41507254
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| ||| ||||||| |||||||||||||||    
T  41507213 agagaaagttgtcacaaaatggttgtacaaatatcatttctc 41507254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 44632581 - 44632536
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    ||||||||||||||  || ||| |||||||||||||||||||||||    
T  44632581 agagaaagttgtcaccaaatggatgttcaaatatcatttctcttaa 44632536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 47642641 - 47642678
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  47642641 aaagttatcaaaaaatggttgttcaaatatcatttctc 47642678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 3826838 - 3826878
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||| ||||||| ||||| ||||||||||||||||||    
T  3826838 aaagttgttaaaaattagttgtacaaatatcatttctctta 3826878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 10890080 - 10890120
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  10890080 aaagttgtcataaaatggatgttcaaatatcatttctctta 10890120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 13813594 - 13813558
Alignment:
Q  8 aagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  13813594 aagttgtcacaaattggttgtacaaatatcatttctc 13813558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 19969580 - 19969620
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||||||||||| ||| ||| ||||||||||||||||||    
T  19969580 agagaaagttgtcataaaatggatgttcaaatatcatttct 19969620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 24775012 - 24774972
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||| | ||| ||||||||||||||||||||||||||    
T  24775012 aaagttgtaataaagtggttgttcaaatatcatttctctta 24774972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 37843466 - 37843506
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||| | ||||| ||||||||||||||||||    
T  37843466 aaagttgtcaaaaagtagttgtacaaatatcatttctctta 37843506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 42539459 - 42539415
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||| | | ||||||| ||||||||||||||||||    
T  42539459 agagaaagttgtcacataatggttgtacaaatatcatttctctta 42539415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 45065920 - 45065960
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||||||||||| ||| ||| ||||||||||||||||||    
T  45065920 agagaaagttgtcacaaaatggatgttcaaatatcatttct 45065960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 50226913 - 50226953
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||| ||| ||||||| ||||||||||||||||||    
T  50226913 aaagttgtcacaaagtggttgtacaaatatcatttctctta 50226953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 50721779 - 50721817
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||||||||||||||||||||||||||||    
T  50721779 aaagttgtcaaaaattggttgttcaaatatcatttctct 50721817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 32012933 - 32012896
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32012933 aaagttgtcaaaaattggttgttcaaatatcatttctc 32012896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 5386425 - 5386385
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  5386425 agagaaagttgtcaaaaaatggttgttcaaatatcatttct 5386385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 51255783 - 51255743
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  51255783 aaagttgtcaaaaaatggttgttcaaatatcatttctctta 51255743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 7632496 - 7632535
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  7632496 aaagttgtcaaaaattgattgttcaaatatcatttctctt 7632535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 42490961 - 42490919
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||||||| ||||||| ||||||||||||||||    
T  42490961 agagaaagttgtcaaaaagtggttgtacaaatatcatttctct 42490919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 5932798 - 5932835
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| |||||||||||||||||||||||    
T  5932798 aaagttgtcaaaaagtggttgttcaaatatcatttctc 5932835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 19473979 - 19474016
Alignment:
Q  8 aagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  19473979 aagttgtcaaaaaatggttgttcaaatatcatttctct 19474016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 39241320 - 39241361
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  39241320 agagaaagttgtcacaaattggttgtacaaatatcatttctc 39241361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 44925164 - 44925201
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| |||||||||||||||||||||||    
T  44925164 aaagttgtcaaaaagtggttgttcaaatatcatttctc 44925201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2109486 - 2109442
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||    
T  2109486 aaagagaaagttgtcaaaagatggttgtacaaatatcatttctct 2109442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 10147089 - 10147129
Alignment:
Q  4 gagaaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  10147089 gagagagttgtcaaaaaatggttgttcaaatatcatttctc 10147129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 28657459 - 28657503
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||||    
T  28657459 agagaaagttgtcacaaaatggatgttcaaatatcatttctctta 28657503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 46173591 - 46173547
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||||    
T  46173591 agagaaagttgtcacaaagtggttgtacaaatatcatttctctta 46173547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 51717317 - 51717357
Alignment:
Q  8 aagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    ||||||||| ||||||||||| |||||||||||||||||||    
T  51717317 aagttgtcacaaattggttgtacaaatatcatttctcttaa 51717357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 5208361 - 5208400
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  5208361 aaagttgtcacaaattggttgtacaaatatcatttctctt 5208400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 43769764 - 43769721
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||    
T  43769764 agagaaagttgtcacaaaatggatgttcaaatatcatttctctt 43769721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 50831790 - 50831829
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  50831790 aaagttgtcaaaaagtggttgtacaaatatcatttctctt 50831829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 54000731 - 54000696
Alignment:
Q  11 ttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||| |||||||||||||||||||||||||    
T  54000731 ttgtcaaaaagtggttgttcaaatatcatttctctt 54000696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 1796403 - 1796365
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  1796403 aaagttgtcacaaattggttgtacaaatatcatttctct 1796365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 2004223 - 2004261
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  2004223 aaagttgttaaaaaatggttgttcaaatatcatttctct 2004261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 12458619 - 12458692
Alignment:
Q  65 acatatacatactcaacaatccgtagaatactaacatcacgtgaacattatctccaatacaaattatgttatcat 139  Q
    |||| |||||||||| || ||| |||||||||||||||| ||||| ||||||| ||||||| || || |||||||    
T  12458619 acatgtacatactcatcattcc-tagaatactaacatcatgtgaatattatcttcaatacagatcatattatcat 12458692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28676169 - 28676211
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||    
T  28676169 aaagagaaagttgtcacaaaatggttgtacaaatatcatttct 28676211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 31657699 - 31657657
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  31657699 agagaaagttgtcacaaaatggatgttcaaatatcatttctct 31657657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 32621679 - 32621637
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||    
T  32621679 agagaaagttgtcacaaaatggttgtgcaaatatcatttctct 32621637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 37547107 - 37547065
Alignment:
Q  2 aagagaaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||    
T  37547107 aagagaaagttgtcacaaagtggttgtacaaatatcatttctc 37547065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 39606019 - 39605978
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  39606019 agagaaagttgtcaaaaat-ggttgttcatatatcatttctct 39605978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 41119500 - 41119542
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||    
T  41119500 agagaaagttgtcacaaagtggttgtacaaatatcatttctct 41119542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 45083017 - 45082980
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  45083017 aaagttgtcaaaaat-ggttgttcaaatatcatttctct 45082980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 48494935 - 48494973
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  48494935 aaagttgttaaaaagtggttgttcaaatatcatttctct 48494973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 51377327 - 51377365
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  51377327 aaagttgtcacaaattggttgtacaaatatcatttctct 51377365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 55268035 - 55268073
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  55268035 aaagttgtcacaaattggttgtacaaatatcatttctct 55268073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 1840636 - 1840595
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||| ||| ||| |||||||||||||||||||||||    
T  1840636 agagaaagttatcacaaaatggttgttcaaatatcatttctc 1840595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 7037518 - 7037555
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  7037518 aaagttgtcacaaattggttgtacaaatatcatttctc 7037555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 14010152 - 14010193
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||||| ||| ||| |||||||||||||||||||||||    
T  14010152 aaagttgtcacaaaatggatgttcaaatatcatttctcttaa 14010193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 14443235 - 14443198
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| || ||||||||||||||||||||    
T  14443235 aaagttgtcaaaaaatgattgttcaaatatcatttctc 14443198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 23220372 - 23220335
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  23220372 aaagttgtcaaaaaatggttgtacaaatatcatttctc 23220335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 23369367 - 23369407
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||| |||||| ||||||||||||||||||||||||||    
T  23369367 aaagttgtaaaaaat-ggttgttcaaatatcatttctcttaa 23369407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 24045281 - 24045244
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  24045281 aaagttgtaaaaaattggttgtgcaaatatcatttctc 24045244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 27001444 - 27001481
Alignment:
Q  8 aagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    ||||||||| ||||||||||| ||||||||||||||||    
T  27001444 aagttgtcacaaattggttgtacaaatatcatttctct 27001481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 30778283 - 30778324
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| ||||||| ||| |||||||||||||||    
T  30778283 agagaaagttgtcacaaattggctgtacaaatatcatttctc 30778324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 32365686 - 32365727
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| ||| ||||||| |||||||||||||||    
T  32365686 agagaaagttgtcacaaaatggttgtacaaatatcatttctc 32365727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 42853976 - 42853935
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||||||||| | ||||| |||||||||||||||||||    
T  42853976 aaagttgtcaaaaaatagttgtacaaatatcatttctcttaa 42853935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 50506423 - 50506386
Alignment:
Q  14 tcaaaaattggttgttcaaatatcatttctcttaagaa 51  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  50506423 tcaaaaaatggttgttcaaatatcatttctctaaagaa 50506386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 56215642 - 56215605
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  56215642 aaagttgtcaaaaagtggttgtacaaatatcatttctc 56215605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 4896534 - 4896574
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||| ||| ||||||| ||||||||||||||||||    
T  4896534 aaagttgtcacaaagtggttgtacaaatatcatttctctta 4896574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 12387685 - 12387725
Alignment:
Q  4 gagaaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    ||||||||||||||||| || |||| |||||||||||||||    
T  12387685 gagaaagttgtcaaaaaatgattgtacaaatatcatttctc 12387725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 20118818 - 20118778
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||| | ||| ||||||||||||||||||||||||||    
T  20118818 aaagttgttataaaatggttgttcaaatatcatttctctta 20118778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 21014091 - 21014055
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||||||||||| || |||||||||||||||||||    
T  21014091 aaagttgtcaaaaaatgattgttcaaatatcatttct 21014055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 22813751 - 22813783
Alignment:
Q  14 tcaaaaattggttgttcaaatatcatttctctt 46  Q
    ||||||| |||||||||||||||||||||||||    
T  22813751 tcaaaaaatggttgttcaaatatcatttctctt 22813783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29974344 - 29974384
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcattt 41  Q
    |||||||||||||||| ||| | ||||||||||||||||||    
T  29974344 aaagagaaagttgtcacaaaatagttgttcaaatatcattt 29974384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30973640 - 30973596
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    ||||| |||||||||| ||| ||||||| ||||||||||||||||    
T  30973640 aaagaaaaagttgtcataaagtggttgtacaaatatcatttctct 30973596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 37297085 - 37297046
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  37297085 aaagttgtaaaaaat-ggttgttcaaatatcatttctctta 37297046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 44539764 - 44539732
Alignment:
Q  16 aaaaattggttgttcaaatatcatttctcttaa 48  Q
    ||||| |||||||||||||||||||||||||||    
T  44539764 aaaaaatggttgttcaaatatcatttctcttaa 44539732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 45143691 - 45143731
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||||||||||| ||| ||| ||||||||||||||||||    
T  45143691 agagaaagttgtcataaaatggatgttcaaatatcatttct 45143731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 45152460 - 45152500
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||||||||||| ||| ||| ||||||||||||||||||    
T  45152460 agagaaagttgtcataaaatggatgttcaaatatcatttct 45152500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 31619 - 31664
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||    
T  31619 agagaaagttgtcaaaaaatggttgtacaaatatcatttctcttaa 31664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 27695977 - 27696021
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  27695977 agagaaagttgtcaaaaat-ggttgttcaaatatcatttctcttaa 27696021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 7485494 - 7485450
Alignment:
Q  9 agttgtcaaaaattggttgttcaaatatcatttctcttaagaatt 53  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||    
T  7485494 agttgtcacaaagtggttgttcaaatatcatttctcttaagaatt 7485450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 1352425 - 1352386
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  1352425 aaagttgtcaaaaattgattgttcaaatatcatttctctt 1352386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 28014008 - 28013965
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||||||||||||||| ||||||| |||||||||    
T  28014008 agagaaagttgtcaaaaattggttgtacaaatataatttctctt 28013965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 37731234 - 37731273
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  37731234 aaagttgtcaaaaagtggttgttcaaatatcatttctctt 37731273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 3012864 - 3012909
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||||    
T  3012864 agagaaagttgtcacaaaatggatgttcaaatatcatttctcttaa 3012909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 39430708 - 39430663
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||||| |||||| |||||||||||||||| |||||    
T  39430708 aaagagaaagttgtcagaaattgattgttcaaatatcattactctt 39430663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 14871884 - 14871844
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||| |||||||||| |||||||||||||||    
T  14871884 aaagttgtcaaaaaatggttgttcacatatcatttctctta 14871844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 29168762 - 29168722
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||| ||||||| ||||||||||||||||||    
T  29168762 aaagttgtcaaaaaatggttgtacaaatatcatttctctta 29168722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 29795488 - 29795444
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||||    
T  29795488 agagaaagttgtcacaaaatggttgtacaaatatcatttctctta 29795444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 38821403 - 38821363
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||| ||| ||||||||||||||||||||||||||    
T  38821403 aaagttgtcataaaatggttgttcaaatatcatttctctta 38821363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 694321 - 694278
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    ||||||| |||||||||| ||||||| |||||||||||||||||    
T  694321 agagaaaattgtcaaaaaatggttgtacaaatatcatttctctt 694278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 1052530 - 1052585
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaagaatttcatgcata 62  Q
    |||||||| ||||| ||||||| ||||||||||||||||||| || |||| |||||    
T  1052530 aaagttgttaaaaaatggttgtacaaatatcatttctcttaataaattcacgcata 1052585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 2308359 - 2308394
Alignment:
Q  10 gttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    ||||||||||||||||||| ||||||||||||||||    
T  2308359 gttgtcaaaaattggttgtacaaatatcatttctct 2308394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 6646876 - 6646833
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||    
T  6646876 agagaaagttgtcacaaaatggatgttcaaatatcatttctctt 6646833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 8482251 - 8482294
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||    
T  8482251 agagaaagttgtcataaagtggttgtacaaatatcatttctctt 8482294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 19695710 - 19695753
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||||||| || |||| |||||||||||||||||    
T  19695710 agagaaagttgtcaaaaagtgattgtacaaatatcatttctctt 19695753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 27490765 - 27490803
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  27490765 aaagttgtcaaaaat-ggttgttcaaatatcatttctctt 27490803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 28481818 - 28481779
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||||||||||||||| |||||||||    
T  28481818 aaagttgtcaaaaaatggttgttcaaatattatttctctt 28481779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 42081089 - 42081046
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||    
T  42081089 agagaaagttgtcaaaaagtggctgtacaaatatcatttctctt 42081046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 18510712 - 18510674
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  18510712 aaagttgtcaaaaaatagttgttcaaatatcatttctct 18510674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 37966404 - 37966366
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  37966404 aaagttgtcacaaattggttgtacaaatatcatttctct 37966366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 43057101 - 43057063
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  43057101 aaagttgttaaaaagtggttgttcaaatatcatttctct 43057063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 3299139 - 3299180
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||||| ||| ||||||| |||||||||||||||||||    
T  3299139 aaagttgtcataaaatggttgtacaaatatcatttctcttaa 3299180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 3585663 - 3585622
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||| | ||||||||||| |||||||||||||||||||    
T  3585663 aaagttgttagaaattggttgtgcaaatatcatttctcttaa 3585622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4263881 - 4263925
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||||||||| | ||||| |||||||||||||||||    
T  4263881 aaagagaaagttgtcaaaaaat-gttgtacaaatatcatttctctt 4263925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 11965830 - 11965793
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| || ||||||||||||||||||||    
T  11965830 aaagttgtcaaaaagtgattgttcaaatatcatttctc 11965793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 15123970 - 15124007
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  15123970 aaagttgtcaaaaaatggttgtacaaatatcatttctc 15124007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 15260344 - 15260307
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  15260344 aaagttgtctaaaagtggttgttcaaatatcatttctc 15260307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 24727624 - 24727661
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  24727624 aaagttgtcaaaaagtggttgtacaaatatcatttctc 24727661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 25507292 - 25507255
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  25507292 aaagttgtcaaaaagtggttgtacaaatatcatttctc 25507255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 25801836 - 25801873
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  25801836 aaagttgtcacaaattggttgtacaaatatcatttctc 25801873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 30487503 - 30487540
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  30487503 aaagttgtcacaaattggttgtacaaatatcatttctc 30487540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 36587506 - 36587539
Alignment:
Q  11 ttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||| |||||||||||||||||||||||    
T  36587506 ttgtcaaaaaatggttgttcaaatatcatttctc 36587539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 37737996 - 37738036
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  37737996 agagaaagttgtcgaaaat-ggttgttcaaatatcatttctc 37738036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 40504259 - 40504222
Alignment:
Q  9 agttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  40504259 agttgtcataaaatggttgttcaaatatcatttctctt 40504222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 42283267 - 42283312
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    ||||||| |||||||| ||| ||||||| |||||||||||||||||    
T  42283267 aaagagagagttgtcacaaagtggttgtacaaatatcatttctctt 42283312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 45202151 - 45202192
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||| ||||| ||||||| |||||||||||||||    
T  45202151 agagaaagttgtaaaaaaatggttgtacaaatatcatttctc 45202192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 45376255 - 45376292
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  45376255 aaagttgtcaaaaagtggttgtacaaatatcatttctc 45376292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 14876994 - 14876954
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||| | |||||||| |||||||||||||||    
T  14876994 aaagttgtcaaaaaatagttgttcacatatcatttctctta 14876954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 33296105 - 33296145
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||| ||| ||||||| ||||||||||||||||||    
T  33296105 aaagttgtcacaaagtggttgtacaaatatcatttctctta 33296145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 33737352 - 33737396
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    ||||||| |||||| ||| |||| |||||||||||||||||||||    
T  33737352 agagaaatttgtcacaaaatggtagttcaaatatcatttctctta 33737396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 39737720 - 39737760
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||| | ||||||||||| ||||||||||||||||||    
T  39737720 aaagttgttagaaattggttgtacaaatatcatttctctta 39737760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44423021 - 44422981
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcattt 41  Q
    |||||||||||||| ||||| ||||||| ||||||||||||    
T  44423021 aaagagaaagttgttaaaaagtggttgtacaaatatcattt 44422981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000005; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 12007220 - 12007260
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  12007220 aaagttgtcaaaaaatggttgttcaaatatcatttctctta 12007260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 26749057 - 26749015
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  26749057 agagaaagttgtcaaaaattg-ttgttcaaatatcatttctctt 26749015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 47448863 - 47448824
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  47448863 aaagttgtcaaaaaatggttgttcaaatatcatttctctt 47448824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 2008892 - 2008930
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  2008892 aaagttgtcaaaaagtggttgttcaaatatcatttctct 2008930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 45
Target Start/End: Original strand, 44649364 - 44649398
Alignment:
Q  11 ttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||||||||||||||||||||||||    
T  44649364 ttgtcaaaaattggttgttcaaatatcatttctct 44649398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 45420079 - 45420121
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||||||| | ||||||||||||||||||||||    
T  45420079 agagaaagttgtcaaaaaatagttgttcaaatatcatttctct 45420121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 32777741 - 32777778
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| |||||||||||||||||||||||    
T  32777741 aaagttgtcaaaaaatggttgttcaaatatcatttctc 32777778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 37352143 - 37352106
Alignment:
Q  11 ttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||||| |||||||||||||||||||||||||||    
T  37352143 ttgtcaaaaaatggttgttcaaatatcatttctcttaa 37352106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 22330650 - 22330694
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||||    
T  22330650 agagaaagttgtcacaaagtggttgtacaaatatcatttctctta 22330694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 35293167 - 35293127
Alignment:
Q  5 agaaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  35293167 agaaagttgtcaaaaaatggatgttcaaatatcatttctct 35293127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 41985119 - 41985163
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||| |||||| |||| ||||||||||||||||||    
T  41985119 agagaaagttgtcacaaattgattgtacaaatatcatttctctta 41985163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 2469744 - 2469701
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||    
T  2469744 agagaaagttgtcacaaagtggttgtacaaatatcatttctctt 2469701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 30864451 - 30864490
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  30864451 aaagttgtcacaaattggttgtacaaatatcatttctctt 30864490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 31274563 - 31274602
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  31274563 aaagttgtcacaaattggttgtacaaatatcatttctctt 31274602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 33845079 - 33845040
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  33845079 aaagttgtcaaaaagtggttattcaaatatcatttctctt 33845040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 37352009 - 37352052
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||    
T  37352009 agagaaagttgtcacaaagtggttgtacaaatatcatttctctt 37352052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 37392080 - 37392041
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  37392080 aaagttgtcaaaaaatggttgtacaaatatcatttctctt 37392041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 38344797 - 38344758
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  38344797 aaagttgtcaaaaattgattgttcaaatataatttctctt 38344758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 48395285 - 48395246
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  48395285 aaagttgtcaaaaagtggttgtacaaatatcatttctctt 48395246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 10656669 - 10656631
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  10656669 aaagttgtcagaaattggttgtacaaatatcatttctct 10656631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 13152629 - 13152592
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  13152629 aaagttgtcaaaaat-ggttgttcaaatatcatttctct 13152592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 22195164 - 22195202
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  22195164 aaagttgtcaaaaatcagttgttcaaatatcatttctct 22195202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28862098 - 28862144
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||||| ||| ||| ||| ||||||||||||||||||    
T  28862098 aaagagaaagttgtcataaaatggatgtacaaatatcatttctctta 28862144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 47391344 - 47391385
Alignment:
Q  2 aagagaaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    ||||||||||||| |||||| ||||||||||||||||||||||    
T  47391344 aagagaaagttgttaaaaat-ggttgttcaaatatcatttctc 47391385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 8459655 - 8459614
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||| ||||| ||||||| |||||||||||||||    
T  8459655 agagaaagttgttaaaaagtggttgtacaaatatcatttctc 8459614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 13729763 - 13729722
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||||| ||| ||| |||||||||||||||||||||||    
T  13729763 aaagttgtcacaaaatggatgttcaaatatcatttctcttaa 13729722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 22605396 - 22605359
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  22605396 aaagttgttaaaaattagttgttcaaatatcatttctc 22605359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 26041364 - 26041319
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||||| ||| ||||||| | |||||||||||||||    
T  26041364 aaagagaaagttgtcataaaatggttgtacgaatatcatttctctt 26041319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 28109994 - 28109957
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  28109994 aaagttgtcaaaaagtggttgtacaaatatcatttctc 28109957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34992352 - 34992397
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    ||||||| |||||||| ||| ||||||| |||||||||||||||||    
T  34992352 aaagagagagttgtcataaaatggttgtacaaatatcatttctctt 34992397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 35072398 - 35072431
Alignment:
Q  9 agttgtcaaaaattggttgttcaaatatcatttc 42  Q
    |||||||||||| |||||||||||||||||||||    
T  35072398 agttgtcaaaaaatggttgttcaaatatcatttc 35072431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 35098739 - 35098772
Alignment:
Q  9 agttgtcaaaaattggttgttcaaatatcatttc 42  Q
    |||||||||||| |||||||||||||||||||||    
T  35098739 agttgtcaaaaaatggttgttcaaatatcatttc 35098772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 41989761 - 41989805
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||||||| |||||| ||||||| ||||||||||||||||||    
T  41989761 agagaaagttgtaaaaaat-ggttgttaaaatatcatttctcttaa 41989805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 43444676 - 43444635
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| ||| ||||||| |||||||||||||||    
T  43444676 agagaaagttgtcataaagtggttgtacaaatatcatttctc 43444635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 49069286 - 49069249
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  49069286 aaagttgtcaaaaagtggttgtacaaatatcatttctc 49069249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 3062383 - 3062343
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||||||||||| ||| ||| ||||||||||||||||||    
T  3062383 agagaaagttgtcacaaaatggatgttcaaatatcatttct 3062343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 4971327 - 4971287
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||| ||| ||||||| ||||||||||||||||||    
T  4971327 aaagttgtcacaaaatggttgtacaaatatcatttctctta 4971287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 7817690 - 7817650
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||||||||||| ||| ||| ||||||||||||||||||    
T  7817690 agagaaagttgtcacaaaatggatgttcaaatatcatttct 7817650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 9055304 - 9055264
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||| | ||||||||||| ||||||||||||||||||    
T  9055304 aaagttgttagaaattggttgtacaaatatcatttctctta 9055264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 11352992 - 11353036
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||| ||| | | ||||||||||||||||||||||    
T  11352992 agagaaagttgtcacaaaattgatgttcaaatatcatttctctta 11353036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 19065593 - 19065644
Alignment:
Q  45 ttaagaatttcatgcataggacatatacatactcaacaatccgtagaatacta 97  Q
    ||||| ||||||||||||  |||||||||||||||||| ||| ||||||||||    
T  19065593 ttaaggatttcatgcatatcacatatacatactcaacattcc-tagaatacta 19065644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 23910285 - 23910321
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  23910285 aaagttgtcaaaaaatggttgtacaaatatcatttct 23910321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 37325853 - 37325889
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  37325853 aaagttgtcacaaattggttgtacaaatatcatttct 37325889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 37856188 - 37856228
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||| ||| ||||||| ||||||||||||||||||    
T  37856188 aaagttgtcacaaaatggttgtacaaatatcatttctctta 37856228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 13089816 - 13089855
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  13089816 aaagttgtcaaaaaatggttgttcaaatatcatttctctt 13089855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 14206441 - 14206398
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||||||| ||||||| |||||||||||||||||    
T  14206441 agagaaagttgtcaaaaaatggttgtacaaatatcatttctctt 14206398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 21210871 - 21210833
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcattt 41  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  21210871 agagaaagttgtcaaaaagtggttgttcaaatatcattt 21210833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 4719687 - 4719650
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||||||||||| |||||||||||||||    
T  4719687 aaagttgtcaaaaattggttgtacaaatatcatttctc 4719650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 21156024 - 21155987
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| |||||||||||||||||||||||    
T  21156024 aaagttgtcaaaaaatggttgttcaaatatcatttctc 21155987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 32872932 - 32872977
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaagaat 52  Q
    |||||||||||||| | |||||||||||||||||||||||| ||||    
T  32872932 aaagttgtcaaaaaatagttgttcaaatatcatttctcttaggaat 32872977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 1274394 - 1274355
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  1274394 aaagttgtcaaaaat-ggttgttcaaatatcatttctctta 1274355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 11148548 - 11148508
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  11148548 aaagttgtcaaaaattgattgtacaaatatcatttctctta 11148508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 18660795 - 18660756
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  18660795 aaagttgtcaaaaat-ggttgttcaaatatcatttctctta 18660756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 13734379 - 13734422
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||    
T  13734379 agagaaagttgtcataaagtggttgtacaaatatcatttctctt 13734422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 14923123 - 14923081
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||| |||||| ||||||||||||||||||||||||    
T  14923123 agagaaagttgtaaaaaat-ggttgttcaaatatcatttctctt 14923081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 27487924 - 27487885
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||| |||||||| ||||||||||||||||||||||    
T  27487924 aaagttgttaaaaattgattgttcaaatatcatttctctt 27487885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 844073 - 844035
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  844073 aaagttgtcaaaaaatggttgtgcaaatatcatttctct 844035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 6865806 - 6865848
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||    
T  6865806 agagaaagttgtcacaaagtggttgtacaaatatcatttctct 6865848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 9594515 - 9594477
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  9594515 aaagttgtcacaaattggttgtacaaatatcatttctct 9594477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 17097836 - 17097874
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  17097836 aaagttatcaaaaaatggttgttcaaatatcatttctct 17097874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 20846491 - 20846449
Alignment:
Q  130 atgttatcatatttatatcatagaacatcaagcatattcattc 172  Q
    |||||||||||||| |||||||| | |||||||||||||||||    
T  20846491 atgttatcatatttctatcatagcatatcaagcatattcattc 20846449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 31683514 - 31683556
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||| ||||||| ||||||||||||| ||||||||||    
T  31683514 agagaaagttatcaaaaagtggttgttcaaatgtcatttctct 31683556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 39458709 - 39458667
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||||||| ||||||| || |||||||||||||    
T  39458709 agagaaagttgtcaaaaactggttgtacagatatcatttctct 39458667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 42446325 - 42446363
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  42446325 aaagttgtcaaaaaatagttgttcaaatatcatttctct 42446363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 43057472 - 43057434
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  43057472 aaagttgtcaaaaagtggttgtacaaatatcatttctct 43057434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 2629855 - 2629818
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  2629855 aaagttgtcaaaaaatggttgtacaaatatcatttctc 2629818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 3263542 - 3263579
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  3263542 aaagttgtcacaaattggttgtacaaatatcatttctc 3263579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5007748 - 5007793
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    ||||||||| |||||| ||| | |||||||||||||||||||||||    
T  5007748 aaagagaaaattgtcacaaaattgttgttcaaatatcatttctctt 5007793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 7076461 - 7076421
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||| |||||| ||||||||||||||||||||||||||    
T  7076461 aaagttgtaaaaaat-ggttgttcaaatatcatttctcttaa 7076421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 8097286 - 8097245
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||| ||||||||||||||| |||||||||||| ||||||    
T  8097286 aaagttatcaaaaattggttgtacaaatatcatttatcttaa 8097245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 8728615 - 8728652
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  8728615 aaagttgtcaaaaagtggttgtacaaatatcatttctc 8728652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 9599762 - 9599799
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  9599762 aaagttgtcacaaattggttgtacaaatatcatttctc 9599799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 12718414 - 12718451
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  12718414 aaagttgtcacaaattggttgtacaaatatcatttctc 12718451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 12779640 - 12779677
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  12779640 aaagttgtcacaaattggttgtacaaatatcatttctc 12779677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 26754672 - 26754709
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  26754672 aaagttgtcaaaatttggttgtacaaatatcatttctc 26754709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 30574411 - 30574448
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  30574411 aaagttgtcacaaattggttgtacaaatatcatttctc 30574448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 35075612 - 35075649
Alignment:
Q  9 agttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||| || ||||||||||||||||||||||    
T  35075612 agttgtcaaaaaatgattgttcaaatatcatttctctt 35075649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 41621962 - 41621999
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  41621962 aaagttgtcaaaaagtggttgtacaaatatcatttctc 41621999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 1293120 - 1293164
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaagaa 51  Q
    |||||||| ||||| ||||||| |||||||||||||||| |||||    
T  1293120 aaagttgttaaaaaatggttgtacaaatatcatttctctgaagaa 1293164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 19376166 - 19376206
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||| ||| ||||||| ||||||||||||||||||    
T  19376166 aaagttgtcagaaagtggttgtacaaatatcatttctctta 19376206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 22647595 - 22647635
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||| | ||||||||||| ||||||||||||||||||    
T  22647595 aaagttgttagaaattggttgtgcaaatatcatttctctta 22647635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 23991169 - 23991209
Alignment:
Q  8 aagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    ||||||||| ||| ||||||| |||||||||||||||||||    
T  23991169 aagttgtcacaaagtggttgtacaaatatcatttctcttaa 23991209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 33910107 - 33910147
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    |||||||||||||||||| ||||||  ||||||||||||||    
T  33910107 agagaaagttgtcaaaaaatggttgaacaaatatcatttct 33910147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000008; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 28700509 - 28700471
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  28700509 aaagttgtcaaaaaatggttgttcaaatatcatttctct 28700471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 32362970 - 32362932
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  32362970 aaagttgtcaaaaaatggttgttcaaatatcatttctct 32362932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44937262 - 44937216
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||||||||| | ||||| ||||||||||||||||||    
T  44937262 aaagagaaagttgtcaaaaaattgttgtacaaatatcatttctctta 44937216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 3069608 - 3069649
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||||| ||||||||||| |||||||||||||||||||    
T  3069608 aaagttgtcacaaattggttgtacaaatatcatttctcttaa 3069649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 3295180 - 3295128
Alignment:
Q  51 atttcatgcataggacatatacatactcaacaatccgtagaatactaacatcac 104  Q
    ||||||||||||  |||||||||||||||||| ||| |||||||||||||||||    
T  3295180 atttcatgcataacacatatacatactcaacattcc-tagaatactaacatcac 3295128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11056939 - 11056983
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||||||||| | ||||| ||||||||||||||||    
T  11056939 aaagagaaagttgtcaaaaaattgttgtacaaatatcatttctct 11056983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 55361252 - 55361296
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    ||||||||||||||| || ||||||| ||||||||||||||||||    
T  55361252 agagaaagttgtcaagaaatggttgtacaaatatcatttctctta 55361296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 32146020 - 32146059
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| | |||||||||||||||||||||||    
T  32146020 aaagttgtcaaaaaatagttgttcaaatatcatttctctt 32146059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 34456827 - 34456788
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  34456827 aaagttgtcaaaaagtggttattcaaatatcatttctctt 34456788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 36818993 - 36818954
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  36818993 aaagttgtcacaaattggttgtacaaatatcatttctctt 36818954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 43883356 - 43883309
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    ||||||||| |||||||||| ||||||| |||||||||||||| ||||    
T  43883356 aaagagaaaattgtcaaaaaatggttgtacaaatatcatttctattaa 43883309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 46952990 - 46952947
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||| ||||||| ||||||| |||||||||||||||||    
T  46952990 agagaaagttatcaaaaaatggttgtacaaatatcatttctctt 46952947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 47683842 - 47683795
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctcttaaga 50  Q
    |||||||||||||| ||| ||||||| |||||||||||||||| ||||    
T  47683842 agagaaagttgtcacaaaatggttgtacaaatatcatttctctaaaga 47683795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 49761360 - 49761317
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||    
T  49761360 agagaaagttgtcacaaaatggatgttcaaatatcatttctctt 49761317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 46
Target Start/End: Original strand, 4140613 - 4140647
Alignment:
Q  12 tgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    ||||| |||||||||||||||||||||||||||||    
T  4140613 tgtcacaaattggttgttcaaatatcatttctctt 4140647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 4655559 - 4655641
Alignment:
Q  145 tatcatagaacatcaagcatattcattcttcaatcaaattatcaacagaatacatcacttaacaatatcaatcaatataagaa 227  Q
    |||||||| ||||||||||||||| | |   ||||||||  |||||| | ||||||||||||||  ||||||| |||||||||    
T  4655559 tatcatagcacatcaagcatattcctccaataatcaaatcgtcaacaaagtacatcacttaacagcatcaatccatataagaa 4655641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 9862570 - 9862532
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    ||||||| |||||| ||||||||||||||||||||||||    
T  9862570 aaagttgacaaaaaatggttgttcaaatatcatttctct 9862532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 10811172 - 10811134
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  10811172 aaagttgtcataaaatggttgttcaaatatcatttctct 10811134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 20714279 - 20714241
Alignment:
Q  8 aagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  20714279 aagttgtcacaaattggttgtacaaatatcatttctctt 20714241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 32931952 - 32931990
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  32931952 aaagttgtcacaaattggttgtacaaatatcatttctct 32931990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 36869871 - 36869909
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  36869871 aaagttgtcaaaaaatggttgtacaaatatcatttctct 36869909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 49457599 - 49457561
Alignment:
Q  10 gttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  49457599 gttgtcaaaaagtggttgtacaaatatcatttctcttaa 49457561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 50876381 - 50876423
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    |||||||||||||||||| | ||||| ||||||||||||||||    
T  50876381 agagaaagttgtcaaaaaattgttgtacaaatatcatttctct 50876423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 25188499 - 25188536
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| | |||||||||||||||||||||    
T  25188499 aaagttgtcaaaaaatagttgttcaaatatcatttctc 25188536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 29846910 - 29846955
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    ||||||||||||  |||| ||||||| |||||||||||||||||||    
T  29846910 agagaaagttgtacaaaaatggttgtacaaatatcatttctcttaa 29846955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 32457789 - 32457826
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctc 44  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  32457789 aaagttgtcaaaaagtggttgtacaaatatcatttctc 32457826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 43169776 - 43169817
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||||| ||| ||||||| |||||||||||||||||||    
T  43169776 aaagttgtcacaaaatggttgtacaaatatcatttctcttaa 43169817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 48405447 - 48405406
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    |||||||||| ||| ||||||| |||||||||||||||||||    
T  48405447 aaagttgtcacaaaatggttgtacaaatatcatttctcttaa 48405406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 52564664 - 52564709
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctcttaa 48  Q
    ||||||| |||||| ||| ||||||| |||||||||||||||||||    
T  52564664 agagaaaattgtcacaaaatggttgtacaaatatcatttctcttaa 52564709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 3483173 - 3483129
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    ||||||||| |||| ||| ||||||| ||||||||||||||||||    
T  3483173 agagaaagtcgtcacaaagtggttgtacaaatatcatttctctta 3483129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 32008070 - 32008030
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||| | ||||||||||| ||||||||||||||||||    
T  32008070 aaagttgttagaaattggttgtgcaaatatcatttctctta 32008030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 53871051 - 53871091
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    ||||||| |||||| ||| ||||||||||||||||||||||    
T  53871051 agagaaaattgtcataaaatggttgttcaaatatcatttct 53871091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 54195394 - 54195350
Alignment:
Q  1 aaagagaaagttgtcaaaaattggttgttcaaatatcatttctct 45  Q
    ||||||||||||||||  || ||| ||||||||||||||||||||    
T  54195394 aaagagaaagttgtcactaaatggatgttcaaatatcatttctct 54195350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 55151751 - 55151786
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttct 43  Q
    ||||||||||||||| |||||||||||||||||||||    
T  55151751 aaagttgtcaaaaat-ggttgttcaaatatcatttct 55151786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 226
Target Start/End: Original strand, 3787 - 3879
Alignment:
Q  130 atgttatcatatttatatcatagaacatcaagcatattcattcttcaatcaaattatcaacagaatacatcacttaacaatatcaatcaatataaga 226  Q
    ||||||||||| || ||||||| |||||||||||||||||| |     | |||| |||| ||  || ||||||||||||| ||||||||||||||||    
T  3787 atgttatcatacttctatcataaaacatcaagcatattcatac----cttaaatcatcatcaagattcatcacttaacaacatcaatcaatataaga 3879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 10973 - 10934
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  10973 aaagttgtcaaaaagtggttgttcaattatcatttctctt 10934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 28361 - 28400
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||| ||||||| |||||||||||||||||||||||||    
T  28361 aaagttatcaaaaagtggttgttcaaatatcatttctctt 28400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 44827 - 44784
Alignment:
Q  3 agagaaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||    
T  44827 agagaaagttgtcacaaaatggatgttcaaatatcatttctctt 44784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 101940 - 101979
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctt 46  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  101940 aaagttgtcaaaaaatggttgttcagatatcatttctctt 101979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 221
Target Start/End: Original strand, 201995 - 202098
Alignment:
Q  119 caatacaaattatgttatcatatttatatcatagaacatcaagcatattcattcttcaatcaaattatcaacagaatacatca-cttaacaatatcaatc 217  Q
    |||||||||| ||| ||||||| || |||||||  | ||||||||||||||||||| || ||||| |||  || ||| ||| | |||||||| |||||||    
T  201995 caatacaaatcatgatatcatacttctatcataacatatcaagcatattcattctttaaccaaatcatcgtcaaaattcattatcttaacaacatcaatc 202094  T
Q  218 aata 221  Q
    ||||    
T  202095 aata 202098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 10398 - 10333
Alignment:
Q  51 atttcatgcataggacatatacatactcaacaatccgtagaatactaacatcacgtgaacattatct 117  Q
    ||||||||||||  |||||||||||||||||| ||| ||||||||||||  ||| |||| |||||||    
T  10398 atttcatgcataacacatatacatactcaacagtcc-tagaatactaactccacatgaatattatct 10333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 29793 - 29835
Alignment:
Q  5 agaaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||||||||||| |||||||  |||||||||||||||||    
T  29793 agaaagttgtcaaaaagtggttgtataaatatcatttctctta 29835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 49323 - 49291
Alignment:
Q  16 aaaaattggttgttcaaatatcatttctcttaa 48  Q
    ||||| |||||||||||||||||||||||||||    
T  49323 aaaaaatggttgttcaaatatcatttctcttaa 49291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 165509 - 165470
Alignment:
Q  7 aaagttgtcaaaaattggttgttcaaatatcatttctctta 47  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  165509 aaagttgttaaaaat-ggttgttcaaatatcatttctctta 165470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University