View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2024_low_15 (Length: 291)
Name: NF2024_low_15
Description: NF2024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2024_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 16 - 273
Target Start/End: Original strand, 48482619 - 48482876
Alignment:
| Q |
16 |
ttcactgtagaacgcaactgtacatttaaacaatatcaacatattttcccagcagcggaagtaatagccatgtaactaaatgcttacttccataaaaatc |
115 |
Q |
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| T |
48482619 |
ttcactgtagaacgcaactgtacatttaaacaatatcaacatattttcccagcagcggaagtaatagccatgtaactaaatgcttacttccataaaaatc |
48482718 |
T |
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| Q |
116 |
tatatattgattatggacataaatgactttgctgccctccnnnnnnngagcaaattcagaagaaaaagtagcagcttcagatcaaggactagtttaaatt |
215 |
Q |
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| T |
48482719 |
tatatattgattatggacataaatgactttgctgccctccaaaaaaagagcaaattcagaagaaaaagtagcagcttcagatcaaggactagtttaaatt |
48482818 |
T |
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| Q |
216 |
taagtaaaaggatcatcatacttaccgccatgctatatcccatccttgatgcacacat |
273 |
Q |
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| T |
48482819 |
taagtaaaaggatcatcatacttaccgccatgctatatcccatccttgatgcacacat |
48482876 |
T |
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