View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20250_high_21 (Length: 276)
Name: NF20250_high_21
Description: NF20250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20250_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 33885469 - 33885211
Alignment:
| Q |
1 |
cccatgaaagacaagactcacatccacaatcagaccaacttttcactatccttccaccacattttccattagaatcttcttcctccctttttctaccaaa |
100 |
Q |
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| T |
33885469 |
cccatgaaagacaagactcacatccacaatcagaccaacttttcactatccttccaccacattttccataagaatcttcttcctccctttttccaccaaa |
33885370 |
T |
|
| Q |
101 |
ttgaagcaaacctatttctctaaacatgttcttcctctcatacaaactttctgaaacaccatcatcttcatcattcatcaccatcttcttctgtatctcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
33885369 |
ttgaagcaaacctatttctctaaacatgttcttcctctcatacaaactttctgaaacaccatcatcttcatcattcatcaccatcttcttctgtctctcc |
33885270 |
T |
|
| Q |
201 |
catttagagcaacaacaagaagaggccaccccatcaatgcgttcatcaaggtatctata |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33885269 |
catttagagcaacaacaagaagaggccaccccatcaatgcgttcatcaaggtatctata |
33885211 |
T |
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