View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20251_low_5 (Length: 304)
Name: NF20251_low_5
Description: NF20251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20251_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 8 - 239
Target Start/End: Complemental strand, 29375123 - 29374892
Alignment:
| Q |
8 |
gagcagagaaataaacttgatagattgcatgcatgctgacatattgtacaacttttgagtatattgggccatatgttccacgtgaaaaagcttattcagc |
107 |
Q |
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| T |
29375123 |
gagcaaagaaataaacttgatagattgcatgcatgctgacatattgtacaacttttgagtgtattgggccatatgttccacgtgaaaaagcttattcagg |
29375024 |
T |
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| Q |
108 |
tatcttctatggagtacatgttttgaacagttactttatttgtacatagcttgtcttaatttggaacaatgatgtgaactgttgtgaccacggtcaagaa |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29375023 |
tatcttctatggagtacatgttttgaacagttactttatttgtacatagcttgtcttaatttggaacaatgatgtgaactgttgtgaccacggtcaagaa |
29374924 |
T |
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| Q |
208 |
caagagcttgggaatctgggatatgaaaaatc |
239 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
29374923 |
caagagcttgggaatctgggatatgaaaaatc |
29374892 |
T |
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