View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20253_low_12 (Length: 226)
Name: NF20253_low_12
Description: NF20253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20253_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 87 - 208
Target Start/End: Complemental strand, 6479855 - 6479734
Alignment:
| Q |
87 |
caagtgggtaagtcatggaacattggtgacttattgtttatttaatatttcatctggaagaagaagaaaacataattttagtggaaataatcattttagg |
186 |
Q |
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| T |
6479855 |
caagtgggtaagtcatggaacattggtgacttattgtttatttaatattccatctggaagaagaagaaaacataattttagtggaaataatcattttagg |
6479756 |
T |
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| Q |
187 |
tttgatcaaagtgatatttgct |
208 |
Q |
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|||||||||||||||||||||| |
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| T |
6479755 |
tttgatcaaagtgatatttgct |
6479734 |
T |
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