View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20253_low_3 (Length: 370)

Name: NF20253_low_3
Description: NF20253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20253_low_3
NF20253_low_3
[»] chr2 (36 HSPs)
chr2 (1-167)||(7157434-7157600)
chr2 (48-167)||(5394380-5394498)
chr2 (47-167)||(12133269-12133389)
chr2 (48-166)||(18105402-18105520)
chr2 (47-160)||(44732619-44732732)
chr2 (47-167)||(42745155-42745275)
chr2 (47-148)||(37568785-37568886)
chr2 (47-166)||(9438176-9438295)
chr2 (47-165)||(31579270-31579388)
chr2 (47-167)||(993736-993855)
chr2 (47-129)||(28365931-28366013)
chr2 (51-159)||(17981484-17981592)
chr2 (49-148)||(17627543-17627642)
chr2 (49-151)||(17672615-17672717)
chr2 (47-167)||(44752233-44752353)
chr2 (47-152)||(39401123-39401228)
chr2 (241-297)||(7157618-7157674)
chr2 (47-151)||(24359547-24359650)
chr2 (74-151)||(17658471-17658548)
chr2 (70-143)||(38463960-38464033)
chr2 (47-112)||(3772637-3772702)
chr2 (47-166)||(13986977-13987096)
chr2 (47-166)||(13992875-13992994)
chr2 (97-160)||(38373038-38373101)
chr2 (94-169)||(38743767-38743842)
chr2 (55-152)||(33756967-33757064)
chr2 (47-167)||(7020399-7020517)
chr2 (48-120)||(40688817-40688888)
chr2 (321-352)||(13754182-13754213)
chr2 (47-90)||(45414032-45414075)
chr2 (61-166)||(24412967-24413071)
chr2 (51-96)||(40003202-40003247)
chr2 (47-108)||(40107289-40107350)
chr2 (55-151)||(13153978-13154074)
chr2 (323-351)||(14288658-14288686)
chr2 (92-144)||(18952294-18952346)
[»] chr4 (32 HSPs)
chr4 (47-200)||(38766071-38766227)
chr4 (47-167)||(14854587-14854707)
chr4 (47-167)||(31307105-31307225)
chr4 (47-167)||(45994504-45994624)
chr4 (47-167)||(35972325-35972445)
chr4 (54-166)||(38844208-38844320)
chr4 (93-167)||(46016177-46016251)
chr4 (47-144)||(13686583-13686680)
chr4 (47-167)||(35334137-35334258)
chr4 (47-146)||(51853680-51853778)
chr4 (47-163)||(22189431-22189547)
chr4 (47-165)||(32005187-32005310)
chr4 (47-148)||(11140439-11140540)
chr4 (93-167)||(46250594-46250668)
chr4 (95-160)||(9012300-9012365)
chr4 (47-152)||(45695862-45695967)
chr4 (47-165)||(10199148-10199263)
chr4 (60-151)||(17135092-17135182)
chr4 (48-151)||(29597456-29597559)
chr4 (102-167)||(51626345-51626410)
chr4 (51-151)||(56447177-56447277)
chr4 (100-151)||(13948647-13948698)
chr4 (47-165)||(7096078-7096196)
chr4 (79-150)||(14042843-14042914)
chr4 (49-144)||(37626503-37626598)
chr4 (82-151)||(47023419-47023488)
chr4 (47-83)||(25768775-25768811)
chr4 (75-143)||(48998068-48998136)
chr4 (115-169)||(28408537-28408591)
chr4 (115-151)||(3649101-3649137)
chr4 (70-166)||(22017469-22017565)
chr4 (51-151)||(25712471-25712571)
[»] chr7 (36 HSPs)
chr7 (47-167)||(29059787-29059907)
chr7 (47-165)||(8839322-8839440)
chr7 (47-200)||(28537372-28537524)
chr7 (47-165)||(13254142-13254260)
chr7 (59-165)||(31492097-31492203)
chr7 (47-155)||(2657887-2657995)
chr7 (47-167)||(19477288-19477408)
chr7 (47-167)||(21747079-21747198)
chr7 (49-166)||(40099312-40099429)
chr7 (47-167)||(46373655-46373775)
chr7 (56-152)||(27484103-27484199)
chr7 (47-146)||(12142608-12142707)
chr7 (53-143)||(5905810-5905900)
chr7 (47-151)||(7265368-7265472)
chr7 (47-214)||(20207480-20207649)
chr7 (47-150)||(7190415-7190518)
chr7 (48-151)||(40211936-40212039)
chr7 (94-169)||(24172236-24172313)
chr7 (84-165)||(23933692-23933773)
chr7 (48-151)||(24579507-24579610)
chr7 (73-151)||(31717920-31718001)
chr7 (47-150)||(35707829-35707931)
chr7 (47-141)||(2371130-2371224)
chr7 (51-145)||(21411685-21411779)
chr7 (47-109)||(42741909-42741971)
chr7 (102-151)||(4059748-4059797)
chr7 (1-46)||(39459933-39459978)
chr7 (54-110)||(2116242-2116298)
chr7 (48-151)||(24512609-24512712)
chr7 (77-143)||(2871038-2871104)
chr7 (51-89)||(32469916-32469954)
chr7 (50-151)||(37212596-37212698)
chr7 (122-167)||(14545000-14545045)
chr7 (107-167)||(11486783-11486843)
chr7 (79-151)||(18038078-18038150)
chr7 (321-353)||(42841850-42841882)
[»] chr8 (26 HSPs)
chr8 (47-167)||(30935986-30936106)
chr8 (47-167)||(4125063-4125183)
chr8 (50-167)||(19715765-19715882)
chr8 (47-167)||(12958124-12958244)
chr8 (47-152)||(2743915-2744020)
chr8 (64-165)||(15682928-15683029)
chr8 (56-166)||(13468785-13468895)
chr8 (56-167)||(30056040-30056151)
chr8 (47-151)||(36994555-36994659)
chr8 (47-145)||(23981534-23981632)
chr8 (74-151)||(16701434-16701511)
chr8 (55-144)||(35206990-35207079)
chr8 (47-151)||(44638965-44639069)
chr8 (56-165)||(10030949-10031058)
chr8 (47-166)||(28377640-28377759)
chr8 (47-118)||(44705654-44705725)
chr8 (47-100)||(39086800-39086853)
chr8 (77-165)||(4321545-4321633)
chr8 (55-151)||(11363259-11363354)
chr8 (116-167)||(7839292-7839343)
chr8 (76-151)||(8878150-8878224)
chr8 (57-152)||(27121804-27121899)
chr8 (290-320)||(31760002-31760032)
chr8 (324-352)||(8672724-8672752)
chr8 (74-166)||(21032306-21032397)
chr8 (101-149)||(24988530-24988578)
[»] chr5 (19 HSPs)
chr5 (47-166)||(10591909-10592028)
chr5 (47-150)||(30785042-30785145)
chr5 (54-167)||(22188037-22188148)
chr5 (56-169)||(31113325-31113438)
chr5 (47-167)||(2798354-2798473)
chr5 (47-155)||(28023494-28023602)
chr5 (47-150)||(18909357-18909457)
chr5 (47-167)||(2804521-2804640)
chr5 (60-150)||(12682630-12682720)
chr5 (106-167)||(5123537-5123598)
chr5 (1-46)||(7464042-7464087)
chr5 (54-151)||(36625583-36625680)
chr5 (85-159)||(35774605-35774679)
chr5 (323-352)||(6754158-6754187)
chr5 (47-167)||(10795357-10795475)
chr5 (74-167)||(12487306-12487398)
chr5 (73-150)||(22297605-22297682)
chr5 (74-151)||(35914431-35914507)
chr5 (53-165)||(3525895-3526006)
[»] chr6 (24 HSPs)
chr6 (48-165)||(12411131-12411248)
chr6 (47-159)||(21910187-21910299)
chr6 (74-150)||(28099252-28099328)
chr6 (47-140)||(15614639-15614732)
chr6 (51-152)||(31107547-31107648)
chr6 (47-145)||(423637-423735)
chr6 (42-151)||(278369-278477)
chr6 (47-167)||(31412105-31412224)
chr6 (98-167)||(12836936-12837005)
chr6 (47-167)||(28933120-28933240)
chr6 (60-127)||(21029062-21029129)
chr6 (50-151)||(24448205-24448306)
chr6 (55-152)||(25084024-25084121)
chr6 (86-150)||(29185314-29185378)
chr6 (56-147)||(3237911-3238002)
chr6 (47-148)||(35224553-35224651)
chr6 (53-151)||(33096756-33096854)
chr6 (72-140)||(9433202-9433270)
chr6 (249-291)||(13692625-13692667)
chr6 (47-150)||(14561024-14561128)
chr6 (47-165)||(17457107-17457225)
chr6 (48-142)||(33792954-33793048)
chr6 (323-352)||(12732404-12732433)
chr6 (47-151)||(26477754-26477858)
[»] chr3 (26 HSPs)
chr3 (47-160)||(30996011-30996124)
chr3 (47-152)||(48204365-48204470)
chr3 (47-167)||(38088617-38088737)
chr3 (47-167)||(38331110-38331230)
chr3 (47-165)||(25224681-25224799)
chr3 (47-158)||(27763705-27763814)
chr3 (47-157)||(42514586-42514698)
chr3 (47-167)||(15283057-15283173)
chr3 (67-165)||(48211001-48211099)
chr3 (47-169)||(14352536-14352662)
chr3 (106-201)||(20861289-20861387)
chr3 (47-109)||(46604657-46604719)
chr3 (47-159)||(40294594-40294706)
chr3 (51-150)||(22288221-22288320)
chr3 (53-145)||(28967243-28967335)
chr3 (71-151)||(50518609-50518689)
chr3 (102-200)||(55123134-55123235)
chr3 (101-146)||(22755680-22755725)
chr3 (74-145)||(54877842-54877913)
chr3 (73-152)||(9651058-9651137)
chr3 (48-90)||(26581877-26581919)
chr3 (93-166)||(11767138-11767211)
chr3 (85-142)||(20616145-20616202)
chr3 (54-143)||(39142961-39143049)
chr3 (47-151)||(21465865-21465969)
chr3 (255-291)||(31126481-31126517)
[»] scaffold0182 (1 HSPs)
scaffold0182 (66-167)||(26332-26433)
[»] chr1 (35 HSPs)
chr1 (47-167)||(22022102-22022222)
chr1 (50-165)||(45806221-45806336)
chr1 (47-152)||(16756064-16756169)
chr1 (47-158)||(28724655-28724765)
chr1 (56-145)||(29124736-29124825)
chr1 (47-167)||(9781028-9781143)
chr1 (54-151)||(40019230-40019327)
chr1 (51-143)||(17600561-17600653)
chr1 (51-151)||(25655319-25655419)
chr1 (47-146)||(10750580-10750679)
chr1 (47-150)||(10840999-10841102)
chr1 (62-167)||(12035546-12035652)
chr1 (53-151)||(24801369-24801467)
chr1 (47-151)||(35692467-35692571)
chr1 (77-151)||(32883625-32883699)
chr1 (76-156)||(18428191-18428271)
chr1 (56-151)||(36982346-36982441)
chr1 (101-151)||(7242862-7242912)
chr1 (77-151)||(31733746-31733820)
chr1 (99-165)||(39547405-39547471)
chr1 (1-46)||(25298149-25298194)
chr1 (47-103)||(14500361-14500417)
chr1 (103-167)||(36806649-36806713)
chr1 (58-145)||(10303107-10303194)
chr1 (51-148)||(52912607-52912702)
chr1 (51-137)||(9066120-9066208)
chr1 (51-144)||(36086843-36086936)
chr1 (75-151)||(13546436-13546512)
chr1 (99-167)||(46864125-46864193)
chr1 (49-126)||(7624859-7624935)
chr1 (47-152)||(32534065-32534170)
chr1 (70-151)||(46411652-46411733)
chr1 (323-351)||(8464237-8464265)
chr1 (53-129)||(21774592-21774667)
chr1 (74-114)||(38465759-38465799)
[»] scaffold0020 (1 HSPs)
scaffold0020 (47-129)||(167837-167917)
[»] scaffold0009 (2 HSPs)
scaffold0009 (56-140)||(32330-32414)
scaffold0009 (135-200)||(27228-27296)
[»] scaffold0189 (1 HSPs)
scaffold0189 (86-165)||(10973-11052)


Alignment Details
Target: chr2 (Bit Score: 131; Significance: 7e-68; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 7157434 - 7157600
Alignment:
Q  1 ttgtagctttcaagttatagcaaaccaaacattatttattgcaatgcaagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||||||||||||||||||| ||| ||||     
T  7157434 ttgtagctttcaagttatagcaaaccaaacattatttattgcaatccaatagcgcttagatgggatagaacgagtctcttctaacttaaccaagatccta 7157533  T
Q  101 ggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctatttgg 167  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7157534 ggttcgaatctagccttgggcatgcagcaacgttaaaactcttagggagagcctgccgcctatttgg 7157600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 5394380 - 5394498
Alignment:
Q  48 aagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttaggg 147  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5394380 aagagcgcttagatgagatggaacgagtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcat-gttaaaactcttaggg 5394478  T
Q  148 agagcctgccgcctatttgg 167  Q
    ||||||||||||| ||||||    
T  5394479 agagcctgccgcccatttgg 5394498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 12133389 - 12133269
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  12133389 caagagcgcttagatgagatggaacgagtctcttctagcttaatcaaggtcatgggttcgaatccagccttggacatgcagcaacgttaaaactcttagg 12133290  T
Q  147 gagagcctgccgcctatttgg 167  Q
    |||||||||||| | ||||||    
T  12133289 gagagcctgccgtccatttgg 12133269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 48 - 166
Target Start/End: Complemental strand, 18105520 - 18105402
Alignment:
Q  48 aagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttaggg 147  Q
    ||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||    
T  18105520 aagagcgcttatatgagatggaacgagtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcaacaacgttaaaattcttatgg 18105421  T
Q  148 agagcctgccgcctatttg 166  Q
    ||||||||||||| |||||    
T  18105420 agagcctgccgcccatttg 18105402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 47 - 160
Target Start/End: Complemental strand, 44732732 - 44732619
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||| |||||||||||||||||| ||||||| || |||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  44732732 caagagcacttagatgagatggaacgggtctcttatagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 44732633  T
Q  147 gagagcctgccgcc 160  Q
    ||||||||||||||    
T  44732632 gagagcctgccgcc 44732619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 42745275 - 42745155
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||||||||||||||||||||| ||||||| || |||||| |||||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  42745275 caagagcgcttagatgagatggaacgggtctcttatagcttaaccaaggtcttgggttcgaatccagccttgggcatgcagcaatgttaaaactcttagg 42745176  T
Q  147 gagagcctgccgcctatttgg 167  Q
    ||||| |||| ||||||||||    
T  42745175 gagagtctgctgcctatttgg 42745155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 37568886 - 37568785
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||| |||||||||||||||||| || ||||||| |||||| |||||||||||||||||||||||||| |||||||||||  |||||||||||||||    
T  37568886 caagagcacttagatgagatggaacgggtttcttctagcttaaccaaggtcctgggttcgaatccagccttaggcatgcagcagtgttaaaactcttagg 37568787  T
Q  147 ga 148  Q
    ||    
T  37568786 ga 37568785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 47 - 166
Target Start/End: Complemental strand, 9438295 - 9438176
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||| |||||||||||||||||| |||||| || |||||| || ||| | |||||||||||||||||||||||||||||  |||||||||||||||    
T  9438295 caagagcgtttagatgagatggaacgaatctcttttagcttaaccaaagtctttggttcgaatccagccttgggcatgcagcagggttaaaactcttagg 9438196  T
Q  147 gagagcctgccgcctatttg 166  Q
     ||| ||||||||| |||||    
T  9438195 aagaacctgccgcccatttg 9438176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 31579388 - 31579270
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||| ||||||||||||| |||| |||||||||| |||||  |||||| |||||||||||||||||||||||||||| ||  ||||||||| |||||    
T  31579388 caagagcacttagatgagatgtaacgggtctcttctagcttaatcaaggtcttgggttcgaatccagccttgggcatgcaacagtgttaaaacttttagg 31579289  T
Q  147 gagagcctgccgcctattt 165  Q
    ||||| |||||||| ||||    
T  31579288 gagagtctgccgcccattt 31579270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 993736 - 993855
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||||||||||||||||  ||| ||||||| || |||||| |||||||||||||||||| || |||||||||||||||| || |||||||||||||    
T  993736 caagagcgcttagatgagatgacacgtgtctcttatagcttaaccaaggtcctgggttcgaattcaaccttgggcatgcagcagcg-taaaactcttagg 993834  T
Q  147 gagagcctgccgcctatttgg 167  Q
    |||| | ||||||| ||||||    
T  993835 gagaacttgccgcccatttgg 993855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 28365931 - 28366013
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagca 129  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||| || |||||||| |||||||||||||||||||    
T  28365931 caagagcgcttagatgagatggaacgcgtctcttctaacttaaccaaggtcgtgagttcgaatgcagccttgggcatgcagca 28366013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 51 - 159
Target Start/End: Original strand, 17981484 - 17981592
Alignment:
Q  51 agcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggaga 150  Q
    ||||||||||||||||||||||||||||||||| |||||| || ||||||  ||  ||||||| |||||||||||| || | ||||||||||||||||||    
T  17981484 agcgcttagatgagatggaacgagtctcttctagcttaaccaaagtcctgaatttaaatccagtcttgggcatgcaacaacattaaaactcttagggaga 17981583  T
Q  151 gcctgccgc 159  Q
    || ||||||    
T  17981584 gcttgccgc 17981592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 17627543 - 17627642
Alignment:
Q  49 agagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttaggga 148  Q
    |||||||||||| ||||||  ||| ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| || |||||||| |||||||||    
T  17627543 agagcgcttagacgagatgacacgcgtctcttctaatttaaccaaggtcctgagttcgaatccagccttgggcatgcaacaacgttaaaattcttaggga 17627642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 151
Target Start/End: Original strand, 17672615 - 17672717
Alignment:
Q  49 agagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttaggga 148  Q
    |||||||||||| ||||||  ||| |||||||| || ||||| ||||||||| ||||||||||| ||||||||||||| || |||||||| |||||||||    
T  17672615 agagcgcttagacgagatgacacgcgtctcttcaaatttaaccaaggtcctgagttcgaatccaaccttgggcatgcaacaacgttaaaattcttaggga 17672714  T
Q  149 gag 151  Q
    |||    
T  17672715 gag 17672717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 44752353 - 44752233
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||| ||||||||||||||||  || ||||||||||| |||||| ||  |||| |||||||||| || |||||||||||| || ||||||||||||| ||    
T  44752353 caagtgcgcttagatgagatgatacaagtctcttctagcttaaccaaactcctaggttcgaatcaagtcttgggcatgcaacaacgttaaaactctttgg 44752254  T
Q  147 gagagcctgccgcctatttgg 167  Q
    |||||| |||| || ||||||    
T  44752253 gagagcttgccaccaatttgg 44752233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 39401228 - 39401123
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||| || ||||||||||||  |||||||| || ||||||||| ||| || ||| ||||||| ||||||||||||||||| ||| |||||||| |||||    
T  39401228 caagaacgtttagatgagatgacacgagtcttttttaacttaaccaagatcttggattcgaattcagccttgggcatgcagtatcattaaaacttttagg 39401129  T
Q  147 gagagc 152  Q
    ||||||    
T  39401128 gagagc 39401123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 7157618 - 7157674
Alignment:
Q  241 ttataaattcatctgctataatctaacttatcaattatctgctattttttagcaaat 297  Q
    ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||    
T  7157618 ttataaattcatccgctataatctaacttatcaactatctgttattttttagcaaat 7157674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 24359547 - 24359650
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||||||||||||| ||| ||  |||||||||||||||||  |||||||| |||| |||||||||||||   |||||||| | |||||||| |||||    
T  24359547 caagagcgcttagatgatatgaaat-agtctcttctaacttaatcaaggtcctaggtttgaatccagccttgataatgcagcaacattaaaacttttagg 24359645  T
Q  147 gagag 151  Q
    |||||    
T  24359646 gagag 24359650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 17658471 - 17658548
Alignment:
Q  74 gtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    ||||||||||| ||||| ||| |||||  |||||||| ||||||||||||||| || |||||||| ||||||||||||    
T  17658471 gtctcttctaatttaaccaagatcctgaattcgaatctagccttgggcatgcaacaacgttaaaattcttagggagag 17658548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 70 - 143
Target Start/End: Original strand, 38463960 - 38464033
Alignment:
Q  70 acgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactctt 143  Q
    |||||||| |||||||||||| || || || | |||||||||||||||||||||||| || |||||||||||||    
T  38463960 acgagtcttttctaacttaaccaaagttctagattcgaatccagccttgggcatgcaacaccgttaaaactctt 38464033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 3772702 - 3772637
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatcca 112  Q
    |||||||||||||||||||||  || |||||||||||| ||||| ||||||||  |||||||||||    
T  3772702 caagagcgcttagatgagatgacacaagtctcttctaatttaaccaaggtcctaagttcgaatcca 3772637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 166
Target Start/End: Complemental strand, 13987096 - 13986977
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||| |||||| |||||||   || |||||||||||||||| ||||| | ||  ||||||||||| ||||| |||||||| |  || |||||| |||||    
T  13987096 caagatcgcttaaatgagatatcacaagtctcttctaacttacctaagattctttgttcgaatccaaccttgagcatgcagtagtgtaaaaacttttagg 13986997  T
Q  147 gagagcctgccgcctatttg 166  Q
    |||||  |||||| ||||||    
T  13986996 gagagtttgccgcttatttg 13986977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 166
Target Start/End: Complemental strand, 13992994 - 13992875
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||| |||||| |||||||   || |||||||||||||||| ||||| | ||  ||||||||||| ||||| |||||||| |  || |||||| |||||    
T  13992994 caagatcgcttaaatgagatatcacaagtctcttctaacttacctaagattctttgttcgaatccaaccttgagcatgcagtagtgtaaaaacttttagg 13992895  T
Q  147 gagagcctgccgcctatttg 166  Q
    |||||  |||||| ||||||    
T  13992894 gagagtttgccgcttatttg 13992875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 38373101 - 38373038
Alignment:
Q  97 cctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcc 160  Q
    |||||||||||||||| ||||  |||||||||| || ||||||||||||| ||||| |||||||    
T  38373101 cctgggttcgaatccaaccttatgcatgcagcagcggtaaaactcttaggaagagcttgccgcc 38373038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 38743767 - 38743842
Alignment:
Q  94 ggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctatttggat 169  Q
    ||||||| ||| ||||| || ||||||||||||||| |||||||||| || |||||||| ||||||  ||||||||    
T  38743767 ggtcctgagtttgaatctagtcttgggcatgcagcaacgttaaaacttttggggagagcttgccgctcatttggat 38743842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 33756967 - 33757064
Alignment:
Q  55 cttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagc 152  Q
    |||||||||||||  ||| |||||||||| |||||  ||||| ||  |||||||| |||||||| |||| ||  | |||||||||||||||| |||||    
T  33756967 cttagatgagatgacacgggtctcttctagcttaatcaaggttcttagttcgaattcagccttgagcatacaatagcgttaaaactcttaggaagagc 33757064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 7020517 - 7020399
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||| ||||||||||| | ||| |||||||||| |||||| |||||| ||  ||||||| ||   || |||||||||||  ||||||| |||||||    
T  7020517 caagagcgtttagatgagattgcacgggtctcttctagcttaaccaaggtcttgaattcgaattca-atttaggcatgcagcaatgttaaaa-tcttagg 7020420  T
Q  147 gagagcctgccgcctatttgg 167  Q
    |||| | ||||||| ||||||    
T  7020419 gagaacttgccgcccatttgg 7020399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 40688888 - 40688817
Alignment:
Q  48 aagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttggg 120  Q
    |||||||||||| ||||||||||   ||||||||||||||||| || |||||| | |||||| ||||||||||    
T  40688888 aagagcgcttaggtgagatggaattggtctcttctaacttaaccaaagtcctgag-tcgaattcagccttggg 40688817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 352
Target Start/End: Original strand, 13754182 - 13754213
Alignment:
Q  321 aagtgacaattaaaaaggaacggaagtagtaa 352  Q
    ||||||||||||||||||||||||||||||||    
T  13754182 aagtgacaattaaaaaggaacggaagtagtaa 13754213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 90
Target Start/End: Complemental strand, 45414075 - 45414032
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaac 90  Q
    ||||||| ||||||||||||| |||||||||||||||| |||||    
T  45414075 caagagcacttagatgagatgaaacgagtctcttctaatttaac 45414032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 166
Target Start/End: Complemental strand, 24413071 - 24412967
Alignment:
Q  61 tgagatggaacgagtctcttctaacttaa-ctaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgc 159  Q
    |||||||| ||||||||||||||  |||| | |||||| || ||||||||| | |||| | ||||||||| ||||||||||| || ||||||| |||| |    
T  24413071 tgagatggtacgagtctcttctagtttaagcaaaggtcttgagttcgaatctaacctt-gacatgcagcaacgttaaaactc-taaggagagcttgccac 24412974  T
Q  160 ctatttg 166  Q
    |||||||    
T  24412973 ctatttg 24412967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 40003247 - 40003202
Alignment:
Q  51 agcgcttagatgagatggaacgagtctcttctaacttaactaaggt 96  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||    
T  40003247 agcgcttagatgagatgacatgagtctattctaacttaactaaggt 40003202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 40107289 - 40107350
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaa 108  Q
    |||||||| |||| |||||||  |||||||| ||||| ||||| |||| |||||||||||||    
T  40107289 caagagcgattagttgagatgatacgagtcttttctagcttaattaagatcctgggttcgaa 40107350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 13154074 - 13153978
Alignment:
Q  55 cttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    |||||||||||||  |  ||||||||||||||||||  | ||  || ||| |||| ||| ||||| || |||||| |||||||||||||||| ||||    
T  13154074 cttagatgagatgacataagtctcttctaacttaacccaagttttgagtttgaatacagtcttggacacgcagcaacgttaaaactcttaggaagag 13153978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 351
Target Start/End: Original strand, 14288658 - 14288686
Alignment:
Q  323 gtgacaattaaaaaggaacggaagtagta 351  Q
    |||||||||||||||||||||||||||||    
T  14288658 gtgacaattaaaaaggaacggaagtagta 14288686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 18952294 - 18952346
Alignment:
Q  92 aaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactctta 144  Q
    ||||||||| ||||||||||| | || ||||||||||| | ||||||||||||    
T  18952294 aaggtcctgagttcgaatccaactttaggcatgcagcaacattaaaactctta 18952346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 9e-49; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 47 - 200
Target Start/End: Original strand, 38766071 - 38766227
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  38766071 caagagcgcttagatgagatggaacgagtctcttctagcttaaccaaggtcctgggtttgaatccagccttgggcatgcagcagcgttaaaactcttagg 38766170  T
Q  147 gagagcctgccgcctatttggatgt---gatgctcgaggaattagtcttcgcagttg 200  Q
    ||||| |||||||| |||||| | |    |||||||||| |||||||| ||||||||    
T  38766171 gagagtctgccgcccatttgggtctcacaatgctcgagggattagtctccgcagttg 38766227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 14854587 - 14854707
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||||||||||||||||||||||  ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14854587 caagagcgcttagatgagatggaacggttctcttctagcttaaccaaggttctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 14854686  T
Q  147 gagagcctgccgcctatttgg 167  Q
    |||||| ||||||| ||||||    
T  14854687 gagagcttgccgcccatttgg 14854707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 31307225 - 31307105
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||| |||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  31307225 caagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 31307126  T
Q  147 gagagcctgccgcctatttgg 167  Q
    |||||||||||||| ||||||    
T  31307125 gagagcctgccgcccatttgg 31307105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 45994504 - 45994624
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||| ||||||||||||||||  |||||||||| |||||| |||||||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  45994504 caagagcgtttagatgagatggaacaggtctcttctagcttaaccaaggtcctggattcgaatccagccttgggcatgcaacaacgttaaaactcttagg 45994603  T
Q  147 gagagcctgccgcctatttgg 167  Q
    ||||||||| |||| ||||||    
T  45994604 gagagcctgacgcccatttgg 45994624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 35972325 - 35972445
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||||||||||||||||||||| | |||||||| |||||| |||||| ||||||||||||||||| ||||||| ||||| |||||||||| |||||    
T  35972325 caagagcgcttagatgagatggaacgggcctcttctagcttaaccaaggtcttgggttcgaatccagccatgggcatacagcagcgttaaaactattagg 35972424  T
Q  147 gagagcctgccgcctatttgg 167  Q
    |||||  ||||||| ||||||    
T  35972425 gagagtttgccgcccatttgg 35972445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 54 - 166
Target Start/End: Complemental strand, 38844320 - 38844208
Alignment:
Q  54 gcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcc 153  Q
    ||||| |||||||||||||||||||||||| |||||| |||||| || ||||||||||||| ||||||||||| || |||||||||||||||| |||| |    
T  38844320 gcttaaatgagatggaacgagtctcttctagcttaaccaaggtcatgagttcgaatccagctttgggcatgcaacagcgttaaaactcttaggaagagtc 38844221  T
Q  154 tgccgcctatttg 166  Q
    ||||||| |||||    
T  38844220 tgccgcccatttg 38844208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 93 - 167
Target Start/End: Original strand, 46016177 - 46016251
Alignment:
Q  93 aggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctatttgg 167  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||    
T  46016177 aggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgg 46016251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 13686583 - 13686680
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactctta 144  Q
    |||||||||||||||||||||| | | |||||||||  |||||| ||||||||||||||||||||| |||||||| ||||||| ||||||||||||||    
T  13686583 caagagcgcttagatgagatggcatgggtctcttcttgcttaaccaaggtcctgggttcgaatccatccttgggcgtgcagcagcgttaaaactctta 13686680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 35334258 - 35334137
Alignment:
Q  47 caagagcgctt-agatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttag 145  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||| ||||| || |||||| || |||||||||||||||||||  ||||||||||||||    
T  35334258 caagagcgctttagatgagatggaacaagtctcttctagcttaaccaaggttcttggttcgtattcagccttgggcatgcagcagagttaaaactcttag 35334159  T
Q  146 ggagagcctgccgcctatttgg 167  Q
     ||||| | |||||| ||||||    
T  35334158 agagagtccgccgcccatttgg 35334137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 146
Target Start/End: Original strand, 51853680 - 51853778
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| || || || ||||||||| |||||||||||||||||| || ||||||||||||||    
T  51853680 caagagcgcttagatgagatagaatgagtctcttctaacttaaccaaagttct-ggttcgaattcagccttgggcatgcagcttccttaaaactcttagg 51853778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 47 - 163
Target Start/End: Complemental strand, 22189547 - 22189431
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||| |||||||||||||  | |||||||||||| |||||| ||||||| | ||||||||||| ||||| |||||||||| | ||||||||||||||    
T  22189547 caagagcacttagatgagatgacatgagtctcttctagcttaaccaaggtccagagttcgaatccaaccttgtgcatgcagcaacattaaaactcttagg 22189448  T
Q  147 gagagcctgccgcctat 163  Q
     ||||  ||||||||||    
T  22189447 tagagattgccgcctat 22189431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 32005310 - 32005187
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgca--gcatc---gttaaaactc 141  Q
    |||||| |||| ||||||||||||   ||||||||||||||||| || |||||| |||||||| |||| |||||||||||  |||||   ||||||||||    
T  32005310 caagagagcttggatgagatggaataggtctcttctaacttaaccaaagtcctgagttcgaattcagctttgggcatgcattgcatcagtgttaaaactc 32005211  T
Q  142 ttagggagagcctgccgcctattt 165  Q
    |||||||||| |||||||||||||    
T  32005210 ttagggagagtctgccgcctattt 32005187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 11140439 - 11140540
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||||||||||| ||||   |||  | ||||||| |||||| |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||    
T  11140439 caagagcgcttagataagataacacggctatcttctagcttaaccaaggtcctggtttcgaatccagccttgggcatgcagcagctttaaaactcttagg 11140538  T
Q  147 ga 148  Q
    ||    
T  11140539 ga 11140540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 93 - 167
Target Start/End: Complemental strand, 46250668 - 46250594
Alignment:
Q  93 aggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctatttgg 167  Q
    ||||||| ||||||||||||| |||||||||||||||  ||||||||||||| ||| ||||||||||| ||||||    
T  46250668 aggtcctaggttcgaatccagtcttgggcatgcagcagtgttaaaactcttatggaaagcctgccgcccatttgg 46250594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 9012300 - 9012365
Alignment:
Q  95 gtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcc 160  Q
    |||||||||||||||| ||||||||||||||||||  ||| ||||||||||||||||| |||||||    
T  9012300 gtcctgggttcgaatctagccttgggcatgcagcagtgttcaaactcttagggagagcttgccgcc 9012365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 45695967 - 45695862
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||| |||||||||||||| |||||||||| |||||  || || ||||||||||||| ||||||| ||||| ||||| |||| |||||||| | ||| |    
T  45695967 caagaacgcttagatgagatagaacgagtcttttctagtttgaccaaggtcctgggtttgaatccaaccttgagcatgtagcagcgttaaaatttttaag 45695868  T
Q  147 gagagc 152  Q
    ||||||    
T  45695867 gagagc 45695862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 10199263 - 10199148
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||| |||||| || |||||||||||  |||| |||||  ||| ||||||||  |||| |    
T  10199263 caagagtgcttagatgagatggaacgggtctcttataacttaaccaaggtcttgtgttcgaatcca-acttgagcatgtggcagcgttaaaa--cttaag 10199167  T
Q  147 gagagcctgccgcctattt 165  Q
    |||||| ||||||| ||||    
T  10199166 gagagcttgccgcccattt 10199148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 60 - 151
Target Start/End: Original strand, 17135092 - 17135182
Alignment:
Q  60 atgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    ||||||||  ||| |||||||||| |||||  || ||||| | |||||||||||||||| |||||||||| |||||||||||||||||||||    
T  17135092 atgagatgacacgtgtctcttctagcttaatcaaagtcctag-ttcgaatccagccttgtgcatgcagcagcgttaaaactcttagggagag 17135182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 29597456 - 29597559
Alignment:
Q  48 aagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttaggg 147  Q
    ||||||| ||||||||||||  |||||| | || ||||||||| |||||| || |||| ||| ||| |||||||||||| || ||||||||||||||| |    
T  29597456 aagagcgtttagatgagatgacacgagttttttttaacttaacaaaggtcttgagttcaaattcagtcttgggcatgcaacaacgttaaaactcttagag 29597555  T
Q  148 agag 151  Q
    ||||    
T  29597556 agag 29597559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 51626410 - 51626345
Alignment:
Q  102 gttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctatttgg 167  Q
    ||||||||||||||||||||||||||||  ||||||||| |||||||||| |||||| | ||||||    
T  51626410 gttcgaatccagccttgggcatgcagcagtgttaaaacttttagggagagtctgccgtccatttgg 51626345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 151
Target Start/End: Complemental strand, 56447277 - 56447177
Alignment:
Q  51 agcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggaga 150  Q
    |||| ||||| ||||||  ||| || |||||||  ||||| || ||||| ||||||||||||||  |||||||||||||  |||||||||||||||||||    
T  56447277 agcgtttagaagagatgtcacgggtttcttctagtttaaccaaagtcctaggttcgaatccagctatgggcatgcagcagtgttaaaactcttagggaga 56447178  T
Q  151 g 151  Q
    |    
T  56447177 g 56447177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 13948698 - 13948647
Alignment:
Q  100 gggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  13948698 gggttcgaatccagccttgggtatgcagcagtgttaaaactcttagggagag 13948647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 7096078 - 7096196
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||| |||||||||||||||  ||  || ||||||| |||||| |||||  |||||| |||| ||| |||| | ||||||||  |||||||||||||||    
T  7096078 caagaacgcttagatgagatgacacaggtttcttctagcttaaccaaggttttgggtttgaatacagtcttgagtatgcagcaaagttaaaactcttagg 7096177  T
Q  147 gagagcctgccgcctattt 165  Q
    |||||| | ||||| ||||    
T  7096178 gagagcttaccgcccattt 7096196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 150
Target Start/End: Original strand, 14042843 - 14042914
Alignment:
Q  79 ttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggaga 150  Q
    |||||||||||| || || ||||||||||||| || ||||||||||||||  |||| |||||||| ||||||    
T  14042843 ttctaacttaaccaacgttctgggttcgaatcaagtcttgggcatgcagccgcgtttaaactcttggggaga 14042914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 144
Target Start/End: Original strand, 37626503 - 37626598
Alignment:
Q  49 agagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactctta 144  Q
    |||| ||||||| |||||   ||| |||||||||||||||||||||||| ||| || |||| || |||| |||||||| || |||| |||||||||    
T  37626503 agagtgcttagaagagataatacgtgtctcttctaacttaactaaggtcttggtttggaatacaaccttaggcatgcatcaacgttgaaactctta 37626598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 47023419 - 47023488
Alignment:
Q  82 taacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    ||||| ||| |||||||| ||||| ||||||| ||| |||||||| ||  ||||||||||||||||||||    
T  47023419 taactcaaccaaggtccttggttccaatccagacttaggcatgcaacaaagttaaaactcttagggagag 47023488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 25768811 - 25768775
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttcta 83  Q
    |||||||||||||||||||||||||| ||||||||||    
T  25768811 caagagcgcttagatgagatggaacgggtctcttcta 25768775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 48998136 - 48998068
Alignment:
Q  75 tctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactctt 143  Q
    |||||| ||||||||  ||||||||| ||||||||| || ||||| |||||| || |||||||||||||    
T  48998136 tctcttttaacttaatcaaggtcctgagttcgaatcgagtcttggacatgcatcagcgttaaaactctt 48998068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 169
Target Start/End: Original strand, 28408537 - 28408591
Alignment:
Q  115 cttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctatttggat 169  Q
    ||||||| |||||||||||||||| ||||| ||||||  ||||||| ||||||||    
T  28408537 cttgggcgtgcagcatcgttaaaattcttatggagagtttgccgcccatttggat 28408591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 3649137 - 3649101
Alignment:
Q  115 cttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    |||||||||||| || |||||||||||||||||||||    
T  3649137 cttgggcatgcaacaacgttaaaactcttagggagag 3649101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 22017469 - 22017565
Alignment:
Q  70 acgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctatttg 166  Q
    ||||||||||||||||||||  ||  |  ||| ||| ||||||| |||| | ||| ||||  |||||||| |||||||| ||| |||||||||||||    
T  22017469 acgagtctcttctaacttaatcaaaattttggattcaaatccagtcttgagtatgtagcagtgttaaaacccttagggaaagcttgccgcctatttg 22017565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 151
Target Start/End: Complemental strand, 25712571 - 25712471
Alignment:
Q  51 agcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggaga 150  Q
    |||||||||||||||||  || |||||| |||| |||||  |||||| ||  ||||||||||| |||||  ||||  || | ||||||||||||| ||||    
T  25712571 agcgcttagatgagatgatacaagtctcctctagcttaaacaaggtcatgaattcgaatccagtcttggaaatgccacaaccttaaaactcttagagaga 25712472  T
Q  151 g 151  Q
    |    
T  25712471 g 25712471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 3e-45; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 29059787 - 29059907
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||| |||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  29059787 caagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 29059886  T
Q  147 gagagcctgccgcctatttgg 167  Q
    |||||||||||||| ||||||    
T  29059887 gagagcctgccgcccatttgg 29059907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 8839440 - 8839322
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||||||||||||||||| |||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8839440 caagagcgcttagatgagatgaaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagcgttaaaactcttagg 8839341  T
Q  147 gagagcctgccgcctattt 165  Q
    ||||  |||||||||||||    
T  8839340 gagaatctgccgcctattt 8839322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 47 - 200
Target Start/End: Original strand, 28537372 - 28537524
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||||||||||||||||||||| ||||||||||||||||  |||||  |||||||||||||||||||||||||||| || ||||||||||||||||    
T  28537372 caagagcgcttagatgagatggaacgggtctcttctaacttaatcaaggttttgggttcgaatccagccttgggcatgcaacaacgttaaaactcttagg 28537471  T
Q  147 gagagcctgccgcctatttggatgtgatgctcgaggaattagtcttcgcagttg 200  Q
    |||||||||||||| |||||| |   ||||| |||| |||||||| ||||||||    
T  28537472 gagagcctgccgcccatttgggt-ccatgcttgagggattagtctccgcagttg 28537524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 13254260 - 13254142
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||||||||||||||||||||| |||||||||| |||||| ||||||||| |||||||||||||||| ||||||||||| |||| |||||||||||    
T  13254260 caagagcgcttagatgagatggaacgggtctcttctagcttaaccaaggtcctgagttcgaatccagccttaggcatgcagcagcgttgaaactcttagg 13254161  T
Q  147 gagagcctgccgcctattt 165  Q
    |||||||||||||| ||||    
T  13254160 gagagcctgccgcccattt 13254142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 31492097 - 31492203
Alignment:
Q  59 gatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccg 158  Q
    |||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  31492097 gatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccg 31492196  T
Q  159 cctattt 165  Q
    || ||||    
T  31492197 cccattt 31492203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 47 - 155
Target Start/End: Complemental strand, 2657995 - 2657887
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||| |||| |||| ||| ||||||||||||||||||| |||||||||||||| |    
T  2657995 caagagcgcttagatgagatggaacgagtctcttctaacttaatcaaggccctgagttcaaatacagccttgggcatgcagcaacgttaaaactcttaag 2657896  T
Q  147 gagagcctg 155  Q
    |||||||||    
T  2657895 gagagcctg 2657887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 19477408 - 19477288
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||| ||||||||||||||||| |||||||||| |||||| ||||| ||||||| ||||||||||||||||||||| ||  |||||||||||||||    
T  19477408 caagagcgtttagatgagatggaacgggtctcttctagcttaaccaaggttctgggtttgaatccagccttgggcatgcaacagtgttaaaactcttagg 19477309  T
Q  147 gagagcctgccgcctatttgg 167  Q
    |||||| ||||| | ||||||    
T  19477308 gagagcttgccggccatttgg 19477288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 21747198 - 21747079
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| || ||||||| ||| ||||||||||||||||    
T  21747198 caagagcgtttagatgagatggaacgggtctcttctaacttaaccaaggtcctggg-tcgaatccagctttaggcatgctgcagcgttaaaactcttagg 21747100  T
Q  147 gagagcctgccgcctatttgg 167  Q
    |||||||| || || ||||||    
T  21747099 gagagcctaccacccatttgg 21747079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 166
Target Start/End: Complemental strand, 40099429 - 40099312
Alignment:
Q  49 agagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttaggga 148  Q
    |||||||||||||||||||||||| |||||||||| |||||||||| |||||  |||||||||||| ||||  |||||||| | ||||||||||||||||    
T  40099429 agagcgcttagatgagatggaacgggtctcttctagcttaactaagatcctgaattcgaatccagctttggatatgcagcagcattaaaactcttaggga 40099330  T
Q  149 gagcctgccgcctatttg 166  Q
    |||| ||||||| |||||    
T  40099329 gagcttgccgcccatttg 40099312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 46373655 - 46373775
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||| |||||||||||||   || |||||||||| |||||  ||| |||||||||||||||||| ||||||||| || |||||||||||||| ||||    
T  46373655 caagagctcttagatgagatgacgcgggtctcttctagcttaagcaagatcctgggttcgaatccagtcttgggcatacaacatcgttaaaactcgtagg 46373754  T
Q  147 gagagcctgccgcctatttgg 167  Q
    |||||| ||||||||||||||    
T  46373755 gagagcttgccgcctatttgg 46373775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 27484199 - 27484103
Alignment:
Q  56 ttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagc 152  Q
    ||||||||||||  || ||||||||||| |||||| ||||||||| |||  ||||||||| ||||||||||||| ||||||||||||| ||||||||    
T  27484199 ttagatgagatgacacaagtctcttctagcttaaccaaggtcctgagtttaaatccagccatgggcatgcagcagcgttaaaactcttggggagagc 27484103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 47 - 146
Target Start/End: Original strand, 12142608 - 12142707
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||| |||||||| |||  || |  ||||||||||||||| || ||||| ||||||||| | | | ||||||||||||||||||||||||||||||    
T  12142608 caagagcgtttagatgaaatgacacaaaactcttctaacttaaccaaagtccttggttcgaattcggtcatgggcatgcagcatcgttaaaactcttagg 12142707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 5905810 - 5905900
Alignment:
Q  53 cgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactctt 143  Q
    |||||||||||||| ||||||||||||||||||||||| || ||| | || | |||||||   |||||||||||||| | |||||||||||    
T  5905810 cgcttagatgagatagaacgagtctcttctaacttaaccaacgtcttaggcttgaatccaatattgggcatgcagcagcattaaaactctt 5905900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 7265472 - 7265368
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||| ||| ||||||||  ||| |||||||||| |||||| || ||  |||||||| ||| || ||||||||||||||   |||||||||||||||    
T  7265472 caagagcgtttatatgagatgacacgggtctcttctagcttaaccaaagttttgggttcggatctagtcttgggcatgcagcgatgttaaaactcttagg 7265373  T
Q  147 gagag 151  Q
    |||||    
T  7265372 gagag 7265368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 20207480 - 20207649
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||||||||||||||||  | |  | ||||||| |||||||||| |  ||||||| ||| ||||||| |||||| | || |||||||||||||| |    
T  20207480 caagagcgcttagatgagatgatatggatttcttctagcttaactaagatt-tgggttctaattcagccttaggcatgtaacaacgttaaaactcttaag 20207578  T
Q  147 gagagcctgccgcctatttgga---tgtgatgctcgaggaattagtcttcgcagttgtacacagatgatac 214  Q
    |||||| ||||||  |||||||   |   |||||||||| |||||||| ||||||||  |||||| |||||    
T  20207579 gagagcttgccgcgcatttggatcctacaatgctcgagggattagtctccgcagttgcgcacagaggatac 20207649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 7190518 - 7190415
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||| |||||||||||||||  | ||||||||| |||||| |||||  || ||| |||| |||| |||||||||||||   ||||||||| |||||    
T  7190518 caagagcgtttagatgagatggaataaatctcttctagcttaaccaaggttatgagtttgaattcagcattgggcatgcagccgtgttaaaacttttagg 7190419  T
Q  147 gaga 150  Q
    ||||    
T  7190418 gaga 7190415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 40211936 - 40212039
Alignment:
Q  48 aagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttaggg 147  Q
    ||||||||||||||| || |  | |||| |||| || |||||  |||||| ||||||| ||||||| |||||||||||| || ||||||||||||||||     
T  40211936 aagagcgcttagatgtgacgacatgagtttcttttagcttaatcaaggtcatgggttcaaatccagtcttgggcatgcaacaacgttaaaactcttagga 40212035  T
Q  148 agag 151  Q
    ||||    
T  40212036 agag 40212039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 24172236 - 24172313
Alignment:
Q  94 ggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaa--ctcttagggagagcctgccgcctatttggat 169  Q
    ||||||||||||||||||| ||||||||||||| || ||||||||  ||||||| |||||| ||||||| | ||||||    
T  24172236 ggtcctgggttcgaatccaaccttgggcatgcaacaacgttaaaactctcttagtgagagcttgccgcccacttggat 24172313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 23933773 - 23933692
Alignment:
Q  84 acttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctattt 165  Q
    |||||||||||||||||||||||||||||| |||| || ||||  | | |||||||| ||||||||||  ||||||| ||||    
T  23933773 acttaactaaggtcctgggttcgaatccagtcttgagcttgcaagagcattaaaacttttagggagagtttgccgcccattt 23933692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 24579610 - 24579507
Alignment:
Q  48 aagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttaggg 147  Q
    ||||||| |||||||| |||  | ||||||||||||  ||||| ||||| ||| |||||||| |||| ||  ||||||||||| | |||||| |||||||    
T  24579610 aagagcgattagatgacatgacatgagtctcttctagtttaaccaaggttctgagttcgaattcagctttacgcatgcagcattgataaaacacttaggg 24579511  T
Q  148 agag 151  Q
    ||||    
T  24579510 agag 24579507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 151
Target Start/End: Complemental strand, 31718001 - 31717920
Alignment:
Q  73 agtctcttctaacttaactaaggtcctgg---gttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    ||||||||||||||||||||||||| |     ||||||||||| |||| | ||||||||| |||||||||||||||| ||||    
T  31718001 agtctcttctaacttaactaaggtcttaataagttcgaatccaaccttagacatgcagcaacgttaaaactcttaggaagag 31717920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 35707829 - 35707931
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||| |||||| |||| ||||  ||||||||||  ||||| ||||| |||| |||||||||| | |||| |||||| || |||||||| |||||||    
T  35707829 caagagcgtttagattagattgaacaggtctcttctagtttaaccaaggttctgg-ttcgaatccaactttggacatgcaacaacgttaaaattcttagg 35707927  T
Q  147 gaga 150  Q
    ||||    
T  35707928 gaga 35707931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 2371130 - 2371224
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactc 141  Q
    |||||| ||||||||||||||  |||  |||||||||  || ||||||||||||  ||||||| ||| ||| || |||||||| |||||||||||    
T  2371130 caagagtgcttagatgagatgacacggttctcttctagattgactaaggtcctgaattcgaattcaggcttaggaatgcagcagcgttaaaactc 2371224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 145
Target Start/End: Complemental strand, 21411779 - 21411685
Alignment:
Q  51 agcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttag 145  Q
    |||||||| |||| |||  | ||||||||||||||||||| |||||  || |||||||| |||  ||| |||||||| | |||||||||||||||    
T  21411779 agcgcttatatgaaatgacatgagtctcttctaacttaacgaaggttttgagttcgaattcagatttgagcatgcagtagcgttaaaactcttag 21411685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 42741971 - 42741909
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaat 109  Q
    |||||||| ||||||||||||||||  |||||||||| |||||| || ||||| |||||||||    
T  42741971 caagagcgtttagatgagatggaacaggtctcttctatcttaaccaatgtcctaggttcgaat 42741909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 4059797 - 4059748
Alignment:
Q  102 gttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    |||||||| |||||||| ||||||| |||||||||||||||||| |||||    
T  4059797 gttcgaatacagccttgagcatgcaacatcgttaaaactcttagagagag 4059748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 39459978 - 39459933
Alignment:
Q  1 ttgtagctttcaagttatagcaaaccaaacattatttattgcaatg 46  Q
    |||| ||||||||||||||  |||||||||||||||||||||||||    
T  39459978 ttgttgctttcaagttataagaaaccaaacattatttattgcaatg 39459933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 2116242 - 2116298
Alignment:
Q  54 gcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatc 110  Q
    |||||||| |||||| |||||||| ||||||||| |  |||||||||||||||||||    
T  2116242 gcttagattagatggcacgagtctattctaacttcatcaaggtcctgggttcgaatc 2116298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 24512609 - 24512712
Alignment:
Q  48 aagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttaggg 147  Q
    ||||||| |||||||| |||  ||| ||||||||||  ||||| || ||||||  ||||||| || |||||| ||| || || ||||||||||||| |||    
T  24512609 aagagcgattagatgaaatgacacgggtctcttctagtttaaccaatgtcctgaattcgaatacaaccttggacatccaacaacgttaaaactcttgggg 24512708  T
Q  148 agag 151  Q
    ||||    
T  24512709 agag 24512712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 2871104 - 2871038
Alignment:
Q  77 tcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactctt 143  Q
    |||||||||||||| ||||| ||||||| ||||||| |||| | |||||| ||  ||||||||||||    
T  2871104 tcttctaacttaaccaaggttctgggtttgaatccatccttagacatgcaacaatgttaaaactctt 2871038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 32469916 - 32469954
Alignment:
Q  51 agcgcttagatgagatggaacgagtctcttctaacttaa 89  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  32469916 agcgtttagatgagatggaacgagtctcttctagcttaa 32469954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 151
Target Start/End: Original strand, 37212596 - 37212698
Alignment:
Q  50 gagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaa-ctcttaggga 148  Q
    ||||| ||||||||| ||  || ||| ||||||||||||||  || || || ||| |||||||||||| ||||| || ||||||||||| || |||||||    
T  37212596 gagcgtttagatgagttgacacaagtttcttctaacttaaccgagatcatgagtttgaatccagccttaggcattcaacatcgttaaaaccttttaggga 37212695  T
Q  149 gag 151  Q
    |||    
T  37212696 gag 37212698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 14545000 - 14545045
Alignment:
Q  122 atgcagcatcgttaaaactcttagggagagcctgccgcctatttgg 167  Q
    ||||||||  ||||||||||||||||||||||||||| | ||||||    
T  14545000 atgcagcagtgttaaaactcttagggagagcctgccgtccatttgg 14545045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 11486843 - 11486783
Alignment:
Q  107 aatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctatttgg 167  Q
    |||||||||||||||||||| |   ||||||||||||| | ||||| ||||||| ||||||    
T  11486843 aatccagccttgggcatgcatctgtgttaaaactcttaagaagagcttgccgcccatttgg 11486783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 18038150 - 18038078
Alignment:
Q  79 ttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    |||||||||||| || ||| || ||||||||| | | || ||||||||||| |||||| ||||||||| ||||    
T  18038150 ttctaacttaaccaatgtcttgtgttcgaatctaactttaggcatgcagcagcgttaagactcttaggcagag 18038078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 353
Target Start/End: Complemental strand, 42841882 - 42841850
Alignment:
Q  321 aagtgacaattaaaaaggaacggaagtagtaaa 353  Q
    |||||||||||||||||||||||| ||||||||    
T  42841882 aagtgacaattaaaaaggaacggatgtagtaaa 42841850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 8e-43; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 30935986 - 30936106
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||| |||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||  |||||||||| ||||||||||||||||    
T  30935986 caagagcacttagatgagatggaacgggtctcttctaacttaaccaaggtcctgagttcgaatccagccttaagcatgcagcaacgttaaaactcttagg 30936085  T
Q  147 gagagcctgccgcctatttgg 167  Q
    |||||||||||||| ||||||    
T  30936086 gagagcctgccgcccatttgg 30936106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 4125183 - 4125063
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||| |||||||||||||||||| |||||||||| |||||| || |||||||||||||||| ||||||||||||||||||  |||||||||||||||    
T  4125183 caagagcacttagatgagatggaacgggtctcttctagcttaaccaatgtcctgggttcgaatcaagccttgggcatgcagcactgttaaaactcttagg 4125084  T
Q  147 gagagcctgccgcctatttgg 167  Q
    |||||||||||||| ||||||    
T  4125083 gagagcctgccgcccatttgg 4125063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 167
Target Start/End: Complemental strand, 19715882 - 19715765
Alignment:
Q  50 gagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggag 149  Q
    ||||||||||||||||||||||  |||| ||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  19715882 gagcgcttagatgagatggaacatgtcttttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagcgttaaaactctcagggag 19715783  T
Q  150 agcctgccgcctatttgg 167  Q
    ||| ||||||| ||||||    
T  19715782 agcttgccgcccatttgg 19715765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 12958244 - 12958124
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||| |||||||||||||||||| ||||||||||| |||||| |||||| |||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  12958244 caagagtgcttagatgagatggaactagtctcttctagcttaaccaaggtcatgggtttgaatccagcattgggcatgcagcagcgttaaaactcttagg 12958145  T
Q  147 gagagcctgccgcctatttgg 167  Q
    ||||||||| |||| ||||||    
T  12958144 gagagcctgtcgcccatttgg 12958124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 2743915 - 2744020
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||  ||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  2743915 caagagcatttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 2744014  T
Q  147 gagagc 152  Q
    ||||||    
T  2744015 gagagc 2744020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 64 - 165
Target Start/End: Original strand, 15682928 - 15683029
Alignment:
Q  64 gatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctat 163  Q
    |||||||||||||||||||| |||||  ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  15682928 gatggaacgagtctcttctagcttaatcaaggtcctgagttcgaatccagccttgggcatgcagcagcgttaaaactcttagggagagcctgccgcccat 15683027  T
Q  164 tt 165  Q
    ||    
T  15683028 tt 15683029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 13468895 - 13468785
Alignment:
Q  56 ttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctg 155  Q
    |||||| |||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||| |||    
T  13468895 ttagattagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgtagcagcgttaaaactcttagagagagtctg 13468796  T
Q  156 ccgcctatttg 166  Q
    ||||| |||||    
T  13468795 ccgcccatttg 13468785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 56 - 167
Target Start/End: Complemental strand, 30056151 - 30056040
Alignment:
Q  56 ttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctg 155  Q
    ||||||||||||||||  |||||||||| |||||| |||||| ||||||| ||||||||||| ||||||||||| | |||||||||||||||||||||||    
T  30056151 ttagatgagatggaacatgtctcttctagcttaacgaaggtcatgggttcaaatccagccttaggcatgcagcagcattaaaactcttagggagagcctg 30056052  T
Q  156 ccgcctatttgg 167  Q
    ||| | ||||||    
T  30056051 ccgtccatttgg 30056040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 36994659 - 36994555
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||||||||||| |||||| ||  ||||||||||  ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||| |    
T  36994659 caagagcgcttagataagatggcacatgtctcttctagtttaaccaaggtcctgggttcgaatccagccttggacatgcagcagcgttaaaactcttaag 36994560  T
Q  147 gagag 151  Q
    |||||    
T  36994559 gagag 36994555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 23981632 - 23981534
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttag 145  Q
    ||||||||||||||| |||||  ||||||||||| || |||||||| ||| |||| ||||||| |||| |||| ||||||| | |||||||||||||||    
T  23981632 caagagcgcttagatcagatgacacgagtctcttttagcttaactagggttctggattcgaattcagctttggacatgcaggaacgttaaaactcttag 23981534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 16701511 - 16701434
Alignment:
Q  74 gtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| ||| ||| | | ||||| |||||||||||||    
T  16701511 gtctcttctatcttaactaaggttctgggttcgaatccagccttggacatacagtagctttaaacctcttagggagag 16701434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 55 - 144
Target Start/End: Original strand, 35206990 - 35207079
Alignment:
Q  55 cttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactctta 144  Q
    ||||||||||||| |||  ||||||||||||||||| ||| | ||||||||||||  | |||||| ||||||||| ||||||||||||||    
T  35206990 cttagatgagatgaaacaggtctcttctaacttaaccaagattctgggttcgaatttaaccttggacatgcagcagcgttaaaactctta 35207079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 44638965 - 44639069
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||| ||||||| |||||| | ||  ||||||||||||||||  |||||||||  || ||||||| ||||| ||||||| || ||||||||||||||||    
T  44638965 caagaacgcttaggtgagattgcacatgtctcttctaacttaatcaaggtcctgaatttgaatccaaccttgagcatgcaacaacgttaaaactcttagg 44639064  T
Q  147 gagag 151  Q
    |||||    
T  44639065 gagag 44639069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 56 - 165
Target Start/End: Original strand, 10030949 - 10031058
Alignment:
Q  56 ttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctg 155  Q
    |||||| ||||| ||||||| |||||||||||||| ||  | ||| |||||||||  || |||| ||| || || |||||||||||||||||||||| ||    
T  10030949 ttagataagatgaaacgagtttcttctaacttaaccaaaattctgagttcgaatcttgcattggacatccaacaacgttaaaactcttagggagagcttg 10031048  T
Q  156 ccgcctattt 165  Q
    ||||| ||||    
T  10031049 ccgcccattt 10031058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 166
Target Start/End: Original strand, 28377640 - 28377759
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||||||| |||||||   |||||| |||| || |||||  || ||| || ||||||||||||| || ||||||||||| | |||||| |||||||    
T  28377640 caagagcgcttacatgagataacacgagtttcttttagcttaatcaaagtcatgagttcgaatccagcattaggcatgcagcaacattaaaattcttagg 28377739  T
Q  147 gagagcctgccgcctatttg 166  Q
    |||||  ||||| |||||||    
T  28377740 gagagtttgccgtctatttg 28377759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 44705654 - 44705725
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttg 118  Q
    |||||||| ||||||| ||||||||  ||||||||||  ||||| |||||| ||||||||||||||||||||    
T  44705654 caagagcgtttagatgggatggaacaggtctcttctagtttaaccaaggtcttgggttcgaatccagccttg 44705725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 39086800 - 39086853
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctg 100  Q
    |||||||||||||||||||||||||| | |||||||| |||||| |||||||||    
T  39086800 caagagcgcttagatgagatggaacgggcctcttctagcttaaccaaggtcctg 39086853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 4321633 - 4321545
Alignment:
Q  77 tcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctattt 165  Q
    ||||||| ||||| |||||| ||||||| |||||||| ||| | ||||||  | |||||||||||||||||||||| || || ||||||    
T  4321633 tcttctagcttaagtaaggttctgggtttgaatccagtcttagacatgcaataacgttaaaactcttagggagagcttgtcgtctattt 4321545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 11363259 - 11363354
Alignment:
Q  55 cttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    ||||||||||||| ||| | |||||||||||||||| ||| |  || ||| |||| ||||||||  |||||| |||||||||||||| |||||||||    
T  11363259 cttagatgagatgaaacaaatctcttctaacttaaccaag-tattgagtttgaattcagccttgaacatgcaacatcgttaaaactcctagggagag 11363354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 7839343 - 7839292
Alignment:
Q  116 ttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctatttgg 167  Q
    |||||||||||||| | |||||||||||||||||||| ||||||| ||||||    
T  7839343 ttgggcatgcagcagctttaaaactcttagggagagcatgccgcccatttgg 7839292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 8878224 - 8878150
Alignment:
Q  76 ctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    ||||||||| ||||| ||||||  ||||||||||||||| || |||||||| || |||||||||||||||| ||||    
T  8878224 ctcttctaaattaac-aaggtctcgggttcgaatccagctttaggcatgcaacaacgttaaaactcttaggaagag 8878150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 152
Target Start/End: Complemental strand, 27121899 - 27121804
Alignment:
Q  57 tagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagc 152  Q
    ||||||||||   ||| |||||||||| |||||| || || ||||||||||||||||| ||  ||||||| ||  ||||||||| ||||| |||||    
T  27121899 tagatgagataacacgggtctcttctagcttaaccaaagttctgggttcgaatccagctttaagcatgcaacagtgttaaaacttttaggaagagc 27121804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 320
Target Start/End: Original strand, 31760002 - 31760032
Alignment:
Q  290 tagcaaatactccctccgttcctttttaatt 320  Q
    |||||||||||||||||||||||||||||||    
T  31760002 tagcaaatactccctccgttcctttttaatt 31760032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 352
Target Start/End: Original strand, 8672724 - 8672752
Alignment:
Q  324 tgacaattaaaaaggaacggaagtagtaa 352  Q
    |||||||||||||||||||||||||||||    
T  8672724 tgacaattaaaaaggaacggaagtagtaa 8672752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 166
Target Start/End: Original strand, 21032306 - 21032397
Alignment:
Q  74 gtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctatttg 166  Q
    ||||||| ||||||||| ||  || | ||||| ||||||||||| ||||||||| | |||| ||||| ||||||||||  |||||| ||||||    
T  21032306 gtctcttgtaacttaaccaatatcataggttcaaatccagcctttggcatgcag-agcgtttaaactattagggagagtttgccgcttatttg 21032397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 24988530 - 24988578
Alignment:
Q  101 ggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggag 149  Q
    |||| ||||||||||||||||||||||||  | |||||||||| |||||    
T  24988530 ggtttgaatccagccttgggcatgcagcagtgctaaaactcttggggag 24988578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 8e-40; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 47 - 166
Target Start/End: Original strand, 10591909 - 10592028
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  10591909 caagagcacttagatgagatggaacgggtctcttctagattaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 10592008  T
Q  147 gagagcctgccgcctatttg 166  Q
    ||||| |||||||| |||||    
T  10592009 gagagtctgccgcccatttg 10592028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 30785145 - 30785042
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||  |||||||||||||||||||||||||||| |||||  || ||| |||||||||||||||| |||| ||||||||| ||||||||||||||||    
T  30785145 caagagcatttagatgagatggaacgagtctcttctagcttaatcaatgtcttgggttcgaatccagctttggacatgcagcaacgttaaaactcttagg 30785046  T
Q  147 gaga 150  Q
    ||||    
T  30785045 gaga 30785042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 54 - 167
Target Start/End: Complemental strand, 22188148 - 22188037
Alignment:
Q  54 gcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcc 153  Q
    ||||||||||||| |||||| |||||||||||||||| |||||  |||||| |||||||||||||||||| || || |||||||||||||  |||||| |    
T  22188148 gcttagatgagattgaacgaatctcttctaacttaaccaaggtattgggtttgaatccagccttgggcatacaacagcgttaaaactctt--ggagagtc 22188051  T
Q  154 tgccgcctatttgg 167  Q
    ||||||||||||||    
T  22188050 tgccgcctatttgg 22188037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 31113325 - 31113438
Alignment:
Q  56 ttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctg 155  Q
    |||||||||||| |||| |||| || || ||||| |||||| || ||||||||| |||||||||||||||||||  |||||||||||||||||||||||     
T  31113325 ttagatgagatgaaacgggtcttttttagcttaattaaggttctaggttcgaattcagccttgggcatgcagcagtgttaaaactcttagggagagccta 31113424  T
Q  156 ccgcctatttggat 169  Q
    ||||| ||||||||    
T  31113425 ccgcccatttggat 31113438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 2798473 - 2798354
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||  |||||||||||| |||| || ||||||| |||||| ||||| ||||||||||||||| ||||| |||||||||| |||||||||| |||||    
T  2798473 caagagcagttagatgagatgaaacg-gtttcttctagcttaaccaaggttctgggttcgaatccaaccttgagcatgcagcagcgttaaaacttttagg 2798375  T
Q  147 gagagcctgccgcctatttgg 167  Q
    |||||| | ||||| ||||||    
T  2798374 gagagcttaccgcccatttgg 2798354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 47 - 155
Target Start/End: Complemental strand, 28023602 - 28023494
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||||||||||||||||||||||  ||||||||| |||||| || |||||| |||||||||||||||| |||||  || |  ||||||||| |||||    
T  28023602 caagagcgcttagatgagatggaacggatctcttctagcttaaccaatgtcctgagttcgaatccagccttaggcatatagtagtgttaaaacttttagg 28023503  T
Q  147 gagagcctg 155  Q
    |||||||||    
T  28023502 gagagcctg 28023494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 18909457 - 18909357
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||||||||||||||| ||||| ||   ||||| |||||  |||||||| |||||||||||||||||||| ||||||||  |||||||||||||||    
T  18909457 caagagcgcttagatgagatagaacgggt---ttctagcttaatcaaggtcctaggttcgaatccagccttgggtatgcagcagtgttaaaactcttagg 18909361  T
Q  147 gaga 150  Q
    ||||    
T  18909360 gaga 18909357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 2804640 - 2804521
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||  |||||||||||| |||| || ||||||| |||||| |||||  |||||||||||||| ||||| |||||||||| |||||||||| |||||    
T  2804640 caagagcagttagatgagatgaaacg-gtttcttctagcttaaccaaggttttgggttcgaatccaaccttgagcatgcagcagcgttaaaacttttagg 2804542  T
Q  147 gagagcctgccgcctatttgg 167  Q
    |||||| | ||||| ||||||    
T  2804541 gagagcttaccgcccatttgg 2804521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 12682630 - 12682720
Alignment:
Q  60 atgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggaga 150  Q
    |||||||| ||||||||||||||| |||||  || || ||| ||||||||||||||||| ||||||| || ||||||||||||| ||||||    
T  12682630 atgagatgaaacgagtctcttctagcttaagcaatgttctgagttcgaatccagccttgagcatgcaacaacgttaaaactcttcgggaga 12682720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 5123598 - 5123537
Alignment:
Q  106 gaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctatttgg 167  Q
    |||| |||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||    
T  5123598 gaattcagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgg 5123537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7464042 - 7464087
Alignment:
Q  1 ttgtagctttcaagttatagcaaaccaaacattatttattgcaatg 46  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||    
T  7464042 ttgttgctttcaagttataacaaaccaaacattatttattgcaatg 7464087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 36625583 - 36625680
Alignment:
Q  54 gcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    ||||||||||||||   ||||||||||||||||||| ||||||| |  ||||||||| ||||||    ||||| || |||||||| ||||||||||||    
T  36625583 gcttagatgagatgacgcgagtctcttctaacttaattaaggtcatatgttcgaatctagccttaaatatgcaacaacgttaaaattcttagggagag 36625680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 159
Target Start/End: Original strand, 35774605 - 35774679
Alignment:
Q  85 cttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgc 159  Q
    ||||||||| ||| || ||||||||  |||||||| |||||| ||  |||||||| |||||||||||| ||||||    
T  35774605 cttaactaaagtcttgagttcgaatttagccttggacatgcaacaatgttaaaacacttagggagagcttgccgc 35774679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 352
Target Start/End: Complemental strand, 6754187 - 6754158
Alignment:
Q  323 gtgacaattaaaaaggaacggaagtagtaa 352  Q
    ||||||||||||||||||||||||||||||    
T  6754187 gtgacaattaaaaaggaacggaagtagtaa 6754158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 10795475 - 10795357
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||| |||||||||||||||  |||  |||||||   |||||| ||||||||  |||| ||||||||||| |||||| |||| | |||||||||| | |    
T  10795475 caagaacgcttagatgagatgatacggatctcttcg--cttaaccaaggtcctaagttcaaatccagccttaggcatgaagcagcattaaaactctaaag 10795378  T
Q  147 gagagcctgccgcctatttgg 167  Q
    ||||   ||||||| ||||||    
T  10795377 gagaatgtgccgcccatttgg 10795357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 167
Target Start/End: Complemental strand, 12487398 - 12487306
Alignment:
Q  74 gtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctatttgg 167  Q
    |||||||||| |||||| || ||| ||  ||| ||| ||||||| | |||||| |||||| |||||| ||||||||||| ||||||| ||||||    
T  12487398 gtctcttctagcttaaccaatgtcttgccttcaaattcagccttag-catgcaacatcgtcaaaacttttagggagagcttgccgcccatttgg 12487306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 22297682 - 22297605
Alignment:
Q  73 agtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggaga 150  Q
    |||||||||||||||| ||||||| ||  |||| ||| ||| |||||  |||||| | |||||||||| |||||||||    
T  22297682 agtctcttctaacttagctaaggttctcagttcaaattcagtcttggatatgcagtagcgttaaaacttttagggaga 22297605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 35914431 - 35914507
Alignment:
Q  74 gtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    ||||||||||||||||  ||||| || | |||||||||| | ||||||||||| || |||| | ||||||||||||||    
T  35914431 gtctcttctaacttaatcaaggttctagattcgaatccaacattgggcatgcaacaacgtt-acactcttagggagag 35914507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 165
Target Start/End: Complemental strand, 3526006 - 3525895
Alignment:
Q  53 cgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagc 152  Q
    |||||||||||||||  ||  ||||||||||  ||||| ||| | || | ||||||||||  ||| | |||||| ||| ||||||||| ||||||||||     
T  3526006 cgcttagatgagatgacacatgtctcttctagtttaaccaagattctag-ttcgaatccactcttagacatgcaacattgttaaaacttttagggagagt 3525908  T
Q  153 ctgccgcctattt 165  Q
     ||||||||||||    
T  3525907 ttgccgcctattt 3525895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 1e-38; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 48 - 165
Target Start/End: Original strand, 12411131 - 12411248
Alignment:
Q  48 aagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttaggg 147  Q
    ||||| ||||||||||||||||||  ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||     
T  12411131 aagagtgcttagatgagatggaacaggtctcttctaacttaaccaaggtcctgagttcgaatccagccttgggcatgcagcagcgttaaaactcttagga 12411230  T
Q  148 agagcctgccgcctattt 165  Q
    |||| |||||||| ||||    
T  12411231 agagtctgccgcccattt 12411248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 47 - 159
Target Start/End: Original strand, 21910187 - 21910299
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||| |||||||||||| ||| ||||||||||| |||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  21910187 caagagcgtttagatgagatgaaacaagtctcttctagcttaaccaagatcctgggttcgaatccagccttgggcatgcaacatcgttaaaactcttaga 21910286  T
Q  147 gagagcctgccgc 159  Q
    ||||| |||||||    
T  21910287 gagagtctgccgc 21910299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 28099252 - 28099328
Alignment:
Q  74 gtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggaga 150  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  28099252 gtctcttctaccttaactaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaacttttagggaga 28099328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 15614732 - 15614639
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaact 140  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||| ||| ||||| |||| |||| ||||||||||    
T  15614732 caagagcgcttatatgagatggaacgagtctcttctaacttaaccaatgtcatgggttcgaattcagtcttggacatgtagcaacgttaaaact 15614639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 31107648 - 31107547
Alignment:
Q  51 agcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggaga 150  Q
    |||| |||||||||||| || | ||||||||||||||||||||||| ||| ||||||||||||| |||| |||||| || ||||||||||||| ||||||    
T  31107648 agcgtttagatgagatgaaatgggtctcttctaacttaactaaggttctgagttcgaatccagcattggacatgcaacagcgttaaaactctttgggaga 31107549  T
Q  151 gc 152  Q
    ||    
T  31107548 gc 31107547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 423637 - 423735
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttag 145  Q
    |||||||||||||||||||||||||   |||||||||  ||||| |||||  |||||| |||||||||||||||||||| ||| |||||||||||||||    
T  423637 caagagcgcttagatgagatggaacagatctcttctagtttaaccaaggttttgggtttgaatccagccttgggcatgctgcagcgttaaaactcttag 423735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 42 - 151
Target Start/End: Original strand, 278369 - 278477
Alignment:
Q  42 caatgcaagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactc 141  Q
    |||| |||||||| ||||||||||||  |||||||||||||| ||||||||||||| || ||| ||||||||| ||||||||||| || | |||||||||    
T  278369 caattcaagagcgtttagatgagatgacacgagtctcttctagcttaactaaggtcttgagtttgaatccagctttgggcatgcaaca-cattaaaactc 278467  T
Q  142 ttagggagag 151  Q
    ||| ||||||    
T  278468 ttatggagag 278477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 31412105 - 31412224
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||| |||||||||||||||||| ||||||  ||  |||||||||||| ||| | ||||| |||| |||||| |||||||  |||||||||||||||    
T  31412105 caagagcacttagatgagatggaacgggtctctcatagtttaactaaggtcatggat-cgaattcagctttgggcgtgcagcagtgttaaaactcttagg 31412203  T
Q  147 gagagcctgccgcctatttgg 167  Q
    ||||| |||||||| ||||||    
T  31412204 gagagtctgccgcccatttgg 31412224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 12837005 - 12836936
Alignment:
Q  98 ctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctatttgg 167  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||  |||||| ||||||    
T  12837005 ctgggttcgaatccagccttaggcatgcagcagcgttaaaactcttagggagagctcgccgcccatttgg 12836936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 28933120 - 28933240
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||| ||||||||||| ||| ||||||||| || ||||||||| ||||||  || |||| ||||||| | |||||| ||||||||||| ||||||     
T  28933120 caagagcgtttagatgagatagaatgagtctcttttatcttaactaaagtcctgattttgaattcagccttagacatgcaacatcgttaaaattcttaga 28933219  T
Q  147 gagagcctgccgcctatttgg 167  Q
    |||||  ||||||| ||||||    
T  28933220 gagagtttgccgcccatttgg 28933240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 21029129 - 21029062
Alignment:
Q  60 atgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcag 127  Q
    ||||||||| ||| |||||||||| |||||| |||||| |||||||||||||||||||||||||||||    
T  21029129 atgagatggcacgggtctcttctagcttaaccaaggtcttgggttcgaatccagccttgggcatgcag 21029062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 50 - 151
Target Start/End: Complemental strand, 24448306 - 24448205
Alignment:
Q  50 gagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggag 149  Q
    ||||||||||||||||||  |||||| |||| ||| |||||||| |||||  | |||||| ||||||| | |||||||||| ||||||| ||||||||||    
T  24448306 gagcgcttagatgagatgatacgagtatcttttaaattaactaaagtcctcagctcgaatgcagccttagacatgcagcatagttaaaattcttagggag 24448207  T
Q  150 ag 151  Q
    ||    
T  24448206 ag 24448205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 25084024 - 25084121
Alignment:
Q  55 cttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagc 152  Q
    |||||||||||||  || ||||||||||| |||||  || ||| || |||||||| ||| ||||| |||||||||  |||||||||||||||||||||    
T  25084024 cttagatgagatgacacaagtctcttctagcttaatcaaagtcttgagttcgaattcagtcttggacatgcagcaatgttaaaactcttagggagagc 25084121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 29185314 - 29185378
Alignment:
Q  86 ttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggaga 150  Q
    ||||||||||| || |||||||||||||| || | |||||| || ||||||||||||||||||||    
T  29185314 ttaactaaggttctaggttcgaatccagcattagacatgcatcaacgttaaaactcttagggaga 29185378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 147
Target Start/End: Original strand, 3237911 - 3238002
Alignment:
Q  56 ttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttaggg 147  Q
    ||||||||||||  | | ||||||||||| ||||| ||| |||| ||||||||||||||||||  ||| ||| |  ||||||||||||||||    
T  3237911 ttagatgagatgatatgtgtctcttctaatttaaccaagatccttggttcgaatccagccttgaacattcagtaatgttaaaactcttaggg 3238002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 35224553 - 35224651
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||| |||||| ||||||||||||| |||||||    |||||| ||||| || | |||||||| || ||||||| ||||||| |||||||||||| |||    
T  35224553 caagaacgcttaaatgagatggaacgggtctcttt---cttaaccaaggttctagattcgaatctagtcttgggcgtgcagcaacgttaaaactctcagg 35224649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 151
Target Start/End: Original strand, 33096756 - 33096854
Alignment:
Q  53 cgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    |||||||||||||||  |||| | |||||||| ||||||||||| ||| |||||||| || | |||||  ||||||| |||||||| ||| | ||||||    
T  33096756 cgcttagatgagatgacacgaatgtcttctaatttaactaaggttctgagttcgaattcaactttgggtgtgcagcaacgttaaaattctaaaggagag 33096854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 9433270 - 9433202
Alignment:
Q  72 gagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaact 140  Q
    |||||||||||| ||||||||| || ||||||||||||||| | ||||  ||||| || ||||||||||    
T  9433270 gagtctcttctatcttaactaaagttctgggttcgaatccacctttggatatgcaacaacgttaaaact 9433202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 13692625 - 13692667
Alignment:
Q  249 tcatctgctataatctaacttatcaattatctgctatttttta 291  Q
    ||||| ||||||| ||||||||||||||||| |||||||||||    
T  13692625 tcatccgctataaactaacttatcaattatccgctatttttta 13692667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 14561024 - 14561128
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctg--ggttcgaatccagccttgggcatgcagcatcgttaaaactctta 144  Q
    |||||||| ||| |||||||| | |||||||||| || ||||||||||||| |   |||| ||||||| |||||  | | || |||||||||||||||||    
T  14561024 caagagcgtttaaatgagatgca-cgagtctcttttatcttaactaaggtcatataggtttgaatccaaccttgaacgtacaacatcgttaaaactctta 14561122  T
Q  145 gggaga 150  Q
    ||||||    
T  14561123 gggaga 14561128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 17457225 - 17457107
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||| ||||||||||||||  ||   |||||| ||||||||| || ||  || ||| |||| ||| ||| |||||||| || |||||||||| |||||    
T  17457225 caagagtgcttagatgagatgacacagatctcttttaacttaaccaaagttatgagtttgaattcagtcttcggcatgcatcaacgttaaaacttttagg 17457126  T
Q  147 gagagcctgccgcctattt 165  Q
     ||||| || |||||||||    
T  17457125 aagagcttgtcgcctattt 17457107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 33792954 - 33793048
Alignment:
Q  48 aagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactct 142  Q
    ||||||||||| ||||||||  |  |||||||| || |||||  ||| ||||| |||| ||| |||||||| ||||||| || ||||||||||||    
T  33792954 aagagcgcttaaatgagatgacaaaagtctcttttagcttaatcaagatcctgagttcaaattcagccttgcgcatgcaacaacgttaaaactct 33793048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 352
Target Start/End: Original strand, 12732404 - 12732433
Alignment:
Q  323 gtgacaattaaaaaggaacggaagtagtaa 352  Q
    ||||||||||||||||||||||||||||||    
T  12732404 gtgacaattaaaaaggaacggaagtagtaa 12732433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 26477858 - 26477754
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||||||| ||||||||  |||  ||| || || |||||| ||| || ||  || ||||||||||| ||  |||||||| |||||||| |||||||    
T  26477858 caagagcgcttaaatgagatgacacggatctattttagcttaaccaagatcttgaatttgaatccagcctcggaaatgcagcaacgttaaaattcttagg 26477759  T
Q  147 gagag 151  Q
    |||||    
T  26477758 gagag 26477754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 47 - 160
Target Start/End: Complemental strand, 30996124 - 30996011
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||  ||||||||||||| || ||||||||||||||||    
T  30996124 caagagcgcttagatgagatggaacgggtctcttctatcttaaccaaggtcctgggttcgaatccgaccttgggcatgcaacagcgttaaaactcttagg 30996025  T
Q  147 gagagcctgccgcc 160  Q
    ||||| ||||||||    
T  30996024 gagagtctgccgcc 30996011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 48204470 - 48204365
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||| |||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  48204470 caagagtgcttagatgagatggaacgagtctcttctagcttaaccaaggtcttgggttcgaatccagccttgggcatgcagcaacgttaaaacccttagg 48204371  T
Q  147 gagagc 152  Q
    ||||||    
T  48204370 gagagc 48204365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 38088617 - 38088737
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||||||||||||||||| |||| |||||||||| |||||| ||||| |  |||||||||||||| |||||||||||| | ||||||||||||||||    
T  38088617 caagagcgcttagatgagatgaaacgggtctcttctagcttaaccaaggttccaggttcgaatccagctttgggcatgcagtagcgttaaaactcttagg 38088716  T
Q  147 gagagcctgccgcctatttgg 167  Q
    |||| | ||||||||||||||    
T  38088717 gagaacttgccgcctatttgg 38088737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 38331110 - 38331230
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || |||||| ||| ||||||| | ||| |||||||||| |||||||||||||||     
T  38331110 caagagcgcttagatgagatggatcgggtctcttctaacttaaccaatgtcctgagtttgaatccaactttgagcatgcagcagcgttaaaactcttaga 38331209  T
Q  147 gagagcctgccgcctatttgg 167  Q
    |||||| ||||||| ||||||    
T  38331210 gagagcttgccgcccatttgg 38331230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 25224681 - 25224799
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||||||||||||||||| |||| |||||||||| |||||| ||||||||||||||||||| ||  ||||| |||||||| |||||||||||||| |    
T  25224681 caagagcgcttagatgagatgaaacgggtctcttctagcttaaccaaggtcctgggttcgaatcaagttttgggaatgcagcagcgttaaaactcttaag 25224780  T
Q  147 gagagcctgccgcctattt 165  Q
    |||| | ||||||| ||||    
T  25224781 gagaacttgccgcccattt 25224799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 158
Target Start/End: Original strand, 27763705 - 27763814
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||||||||||||||| ||||| |||||  ||| |||||| |||||||||||||||||||||||||||||||| || ||  |||||||||||||||    
T  27763705 caagagcgcttagatgagatagaacgggtctc--ctagcttaaccaaggtcctgggttcgaatccagccttgggcatacaacagtgttaaaactcttagg 27763802  T
Q  147 gagagcctgccg 158  Q
    ||||| ||||||    
T  27763803 gagagtctgccg 27763814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 47 - 157
Target Start/End: Original strand, 42514586 - 42514698
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagca--tcgttaaaactctta 144  Q
    ||||||||||||||||||||| |||| |||||||||| ||||||||| ||| |||||||||||||| | ||||||||||| ||   ||||||||||||||    
T  42514586 caagagcgcttagatgagatgaaacgtgtctcttctagcttaactaaagtcttgggttcgaatccaactttgggcatgcatcagcgcgttaaaactctta 42514685  T
Q  145 gggagagcctgcc 157  Q
    |||||||| ||||    
T  42514686 gggagagcttgcc 42514698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 15283057 - 15283173
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||||||   ||||||||||||||| | ||||||||||||||| |||||||||||| |    
T  15283057 caagagcgtttagatgagatgatacgagtctcttctaacttaactaagg---tgggttcgaatccagtcatgggcatgcagcatc-ttaaaactcttatg 15283152  T
Q  147 gagagcctgccgcctatttgg 167  Q
    || ||  ||||||| ||||||    
T  15283153 gaaagattgccgcccatttgg 15283173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 48211099 - 48211001
Alignment:
Q  67 ggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctattt 165  Q
    |||||| ||||||||||||||||  |||||  | |||||||||||||||||| |||||||||| |||||||||||||| ||||||| ||||| ||||||    
T  48211099 ggaacgggtctcttctaacttaatcaaggtttttggttcgaatccagccttgagcatgcagcaacgttaaaactcttatggagagcttgccgtctattt 48211001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 47 - 169
Target Start/End: Original strand, 14352536 - 14352662
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgg----gcatgcagcatcgttaaaactct 142  Q
    ||||||||||||||||||||||||| ||||||||||| |||||| ||| |  | |||||||||||||||||||    ||||||||||  |||||||||||    
T  14352536 caagagcgcttagatgagatggaacaagtctcttctagcttaaccaagatattcggttcgaatccagccttggacatgcatgcagcagtgttaaaactct 14352635  T
Q  143 tagggagagcctgccgcctatttggat 169  Q
    || ||||||| || || | ||||||||    
T  14352636 tacggagagcttgtcgtccatttggat 14352662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 201
Target Start/End: Original strand, 20861289 - 20861387
Alignment:
Q  106 gaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctatttggat---gtgatgctcgaggaattagtcttcgcagttgt 201  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||| |    | |||||||||| |||||||| |||||||||    
T  20861289 gaatccagcattgggcatgcagcagcgttaaaactcttagggagagcctgccgcccatttgggttccataatgctcgagggattagtctccgcagttgt 20861387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 46604719 - 46604657
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaat 109  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  46604719 caagagcgcttagatgagatggaacgagtctcttataacttaaccaaggttctgggttcgaat 46604657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 47 - 159
Target Start/End: Original strand, 40294594 - 40294706
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||| | ||||||||||||  ||||||||| |||| |||||  ||||||||| ||||||||||||||||||  ||||| ||  |||||||||||||||    
T  40294594 caagagtgtttagatgagatgacacgagtctcctctaccttaatcaaggtcctgagttcgaatccagccttggatatgcaacaatgttaaaactcttagg 40294693  T
Q  147 gagagcctgccgc 159  Q
    || ||| ||||||    
T  40294694 gaaagcttgccgc 40294706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 150
Target Start/End: Original strand, 22288221 - 22288320
Alignment:
Q  51 agcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggaga 150  Q
    |||||||||||||||||  | || |||||||||||||||| || |||||| |||||||| ||||||||  |||||| ||  |||||||||||||||||||    
T  22288221 agcgcttagatgagatgacatgaatctcttctaacttaaccaaagtcctgagttcgaattcagccttgaacatgcaacaatgttaaaactcttagggaga 22288320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 53 - 145
Target Start/End: Complemental strand, 28967335 - 28967243
Alignment:
Q  53 cgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttag 145  Q
    |||||| ||||||||  ||||||||||||||||||||| |||||| || ||||||||  ||||||| | ||||||||  | ||||||||||||    
T  28967335 cgcttacatgagatgacacgagtctcttctaacttaaccaaggtcatgtgttcgaattgagccttgtgtatgcagcaatgctaaaactcttag 28967243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 151
Target Start/End: Complemental strand, 50518689 - 50518609
Alignment:
Q  71 cgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    ||||||||||||||||||||||| ||| || |||||||| ||| ||||| |||||| || |||| |||||||||| |||||    
T  50518689 cgagtctcttctaacttaactaatgtcatgtgttcgaattcagtcttggacatgcaacaacgttgaaactcttagagagag 50518609  T

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Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 55123134 - 55123235
Alignment:
Q  102 gttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctatttggatgt---gatgctcgaggaattagtcttcgcagt 198  Q
    ||||||||||||||||||  |||||||| |||||||| ||||||||||||| |||  || |||||| | |    |||||||||| |||||||||||||||    
T  55123134 gttcgaatccagccttggaaatgcagcagcgttaaaattcttagggagagcttgctacccatttgggtctcacaatgctcgagggattagtcttcgcagt 55123233  T
Q  199 tg 200  Q
    ||    
T  55123234 tg 55123235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 22755680 - 22755725
Alignment:
Q  101 ggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||    
T  22755680 ggttcgaatccagccttgggcatgcagcagcattaaaactcttagg 22755725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 145
Target Start/End: Original strand, 54877842 - 54877913
Alignment:
Q  74 gtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttag 145  Q
    ||||||||||||||||| |||||  || ||| |||| ||||||||||||| || || |||||||||||||||    
T  54877842 gtctcttctaacttaaccaaggttttgagtttgaattcagccttgggcatccaacaacgttaaaactcttag 54877913  T

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Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 9651058 - 9651137
Alignment:
Q  73 agtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagc 152  Q
    |||||||||||| ||||  | |||| ||||||||||| ||||||||| |||||| || ||||||||   |||||||||||    
T  9651058 agtctcttctaatttaatcatggtcttgggttcgaattcagccttggacatgcaacaacgttaaaatagttagggagagc 9651137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 26581919 - 26581877
Alignment:
Q  48 aagagcgcttagatgagatggaacgagtctcttctaacttaac 90  Q
    ||||| ||||||||||||| | |||||||||||||||||||||    
T  26581919 aagagtgcttagatgagatagcacgagtctcttctaacttaac 26581877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 11767138 - 11767211
Alignment:
Q  93 aggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctatttg 166  Q
    |||||||||||||||||| | ||||||||||||| ||   |||||||||||||  || || ||||||| |||||    
T  11767138 aggtcctgggttcgaatctatccttgggcatgcaacaatattaaaactcttagcaagtgcttgccgcccatttg 11767211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 20616202 - 20616145
Alignment:
Q  85 cttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactct 142  Q
    ||||||||| || |||| ||||||||||| ||||| ||||||||| |||| |||||||    
T  20616202 cttaactaaagttctggattcgaatccagtcttggacatgcagcagcgttgaaactct 20616145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 39143049 - 39142961
Alignment:
Q  54 gcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactctt 143  Q
    |||||||| | |||| || ||||||||||| |||||  || ||||||| ||||||| |||| ||||| ||||| || |||||||||||||    
T  39143049 gcttagattaaatggtacaagtctcttctaccttaatcaatgtcctgg-ttcgaattcagcattgggtatgcaacaacgttaaaactctt 39142961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 21465865 - 21465969
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||| |||||||||||||||  ||| || ||||||||||| |  ||| | ||||||||||||||| ||||  ||| |  ||| |||||||||||| |||    
T  21465865 caagaacgcttagatgagatgacacgtgtttcttctaacttcatcaagattctgggttcgaatccatccttacgcacgtggcagcgttaaaactctcagg 21465964  T
Q  147 gagag 151  Q
     ||||    
T  21465965 aagag 21465969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 291
Target Start/End: Original strand, 31126481 - 31126517
Alignment:
Q  255 gctataatctaacttatcaattatctgctatttttta 291  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  31126481 gctataagctaacttatcaattatttgctatttttta 31126517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 66 - 167
Target Start/End: Original strand, 26332 - 26433
Alignment:
Q  66 tggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctattt 165  Q
    ||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  26332 tggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccattt 26431  T
Q  166 gg 167  Q
    ||    
T  26432 gg 26433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 3e-33; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 22022102 - 22022222
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||| ||||||||||||||||  |||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| | ||||||||||||||    
T  22022102 caagagcgtttagatgagatggaacaggtctcttctagcttaactaaggttgtgggttcgaatccagccttgggcatgcagcagcattaaaactcttagg 22022201  T
Q  147 gagagcctgccgcctatttgg 167  Q
    |||| | |||| || ||||||    
T  22022202 gagaacttgccacccatttgg 22022222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 50 - 165
Target Start/End: Original strand, 45806221 - 45806336
Alignment:
Q  50 gagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggag 149  Q
    ||||||||||||||||| ||||| |||||||||| |||||| ||||||||| |||||||| ||| |||||||||||||||   |||||||||||||||||    
T  45806221 gagcgcttagatgagatagaacgggtctcttctatcttaaccaaggtcctgagttcgaattcagtcttgggcatgcagcagttttaaaactcttagggag 45806320  T
Q  150 agcctgccgcctattt 165  Q
    ||| | ||||||||||    
T  45806321 agcataccgcctattt 45806336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 16756064 - 16756169
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||||||||||||||||||||||  ||||||||| |||||| ||||| ||||||| |||| |||| |||||||||||| | ||||||||||||||||    
T  16756064 caagagcgcttagatgagatggaacggatctcttctagcttaaccaaggttctgggtttgaattcagcattgggcatgcagaagcgttaaaactcttagg 16756163  T
Q  147 gagagc 152  Q
    ||||||    
T  16756164 gagagc 16756169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 158
Target Start/End: Original strand, 28724655 - 28724765
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||||| ||||||||  |||||| ||  |||||||||||||||    
T  28724655 caagagcgcttagatgagatggaacgagtctcttctagcttaa-taaagtcctggattcgaattcagccttgaacatgcaacagtgttaaaactcttagg 28724753  T
Q  147 gagagcctgccg 158  Q
     |||| ||||||    
T  28724754 aagagtctgccg 28724765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 56 - 145
Target Start/End: Original strand, 29124736 - 29124825
Alignment:
Q  56 ttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttag 145  Q
    |||||||||||| ||||||||||||||| |||||| | |||| || ||||||||||||| |||||||||||||| |||||||||||||||    
T  29124736 ttagatgagatgaaacgagtctcttctagcttaaccagggtcatgagttcgaatccagcattgggcatgcagcagcgttaaaactcttag 29124825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 9781143 - 9781028
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||| ||||||||||| |||||  ||||||     |||| ||||||| || |||||||||||||||||||||||||||| ||||||||||||||||    
T  9781143 caagagcgtttagatgagatagaacggatctctt-----ttaattaaggtcttgagttcgaatccagccttgggcatgcagcagcgttaaaactcttagg 9781049  T
Q  147 gagagcctgccgcctatttgg 167  Q
    ||||| | |||||| ||||||    
T  9781048 gagagtcggccgcccatttgg 9781028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 40019230 - 40019327
Alignment:
Q  54 gcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    |||||||||| |||  ||||||||||||||||||||  |||||  ||||||||||| |||||||||  |||||||| ||||||||||||| |||||||    
T  40019230 gcttagatgaaatgatacgagtctcttctaacttaatcaaggttttgggttcgaattcagccttggatatgcagcaacgttaaaactcttggggagag 40019327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 51 - 143
Target Start/End: Complemental strand, 17600653 - 17600561
Alignment:
Q  51 agcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactctt 143  Q
    |||| ||||||||||||  ||| |||||||||| |||||| |||||| |||||| |||| |||||||| ||||||| ||||||||||||||||    
T  17600653 agcgtttagatgagatgacacgggtctcttctagcttaaccaaggtcttgggttagaattcagccttgagcatgcaacatcgttaaaactctt 17600561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 51 - 151
Target Start/End: Complemental strand, 25655419 - 25655319
Alignment:
Q  51 agcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggaga 150  Q
    |||| |||||||||||||||| | | |||||||||||||  ||||| ||||||||||||  | | |||||||||||||| ||||||||||||||| ||||    
T  25655419 agcgtttagatgagatggaacaaatatcttctaacttaatcaaggttctgggttcgaatttaacattgggcatgcagcaacgttaaaactcttagagaga 25655320  T
Q  151 g 151  Q
    |    
T  25655319 g 25655319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 146
Target Start/End: Original strand, 10750580 - 10750679
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||||||||||||||||| |||  |||| |||||| ||||| |||||| |||||||||||| |  ||||||||| || || ||||||||||||||||    
T  10750580 caagagcgcttagatgagatgaaacatgtcttttctaatttaaccaaggtcttgggttcgaatctaatcttgggcatacatcagcgttaaaactcttagg 10750679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 10840999 - 10841102
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||||||||||||||||||| |||  |||||||||| |||||| ||| |  ||||||| ||| |||||||||||||| | || |||||||| |||||||    
T  10840999 caagagcgcttagatgagatgaaacaggtctcttctatcttaaccaagattttgggttcaaattcagccttgggcatgtaacaacgttaaaattcttagg 10841098  T
Q  147 gaga 150  Q
    ||||    
T  10841099 gaga 10841102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 62 - 167
Target Start/End: Original strand, 12035546 - 12035652
Alignment:
Q  62 gagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgtt-aaaactcttagggagagcctgccgcc 160  Q
    ||||||||| | ||||||||||  ||||| || ||| | ||||||||||||||||| |||||||| ||| ||| ||||||||||||||||| ||||||||    
T  12035546 gagatggaaagggtctcttctagtttaaccaaagtctttggttcgaatccagcctttggcatgcaacattgttaaaaactcttagggagagtctgccgcc 12035645  T
Q  161 tatttgg 167  Q
     ||||||    
T  12035646 catttgg 12035652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 53 - 151
Target Start/End: Original strand, 24801369 - 24801467
Alignment:
Q  53 cgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    |||||||||||||||  |||  | |||| ||  |||||||| ||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  24801369 cgcttagatgagatgacacggatttcttatagattaactaaagtccttggttcgaatccagccttaggcatgcagcactgttaaaactcttagggagag 24801467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 35692467 - 35692571
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    |||||||||||||||||||||| | | |||| |||||  ||||| || ||| || ||||||||||| | ||||||||||| |  ||||||||||||||||    
T  35692467 caagagcgcttagatgagatggcatgggtcttttctagtttaaccaatgtcttgagttcgaatccaacattgggcatgcaacgacgttaaaactcttagg 35692566  T
Q  147 gagag 151  Q
    |||||    
T  35692567 gagag 35692571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 32883699 - 32883625
Alignment:
Q  77 tcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    ||||||| |||||| ||| |  |||||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  32883699 tcttctagcttaaccaagattttgggttcgaatccagcattggacatgcagcagcgttaaaactcttagggagag 32883625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 76 - 156
Target Start/End: Complemental strand, 18428271 - 18428191
Alignment:
Q  76 ctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgc 156  Q
    ||||| || |||||| ||||| |||| |||||||||| ||||||||||||||||  ||||||||| |||||||||| ||||    
T  18428271 ctcttgtagcttaaccaaggttctggattcgaatccaaccttgggcatgcagcagtgttaaaacttttagggagagtctgc 18428191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 151
Target Start/End: Original strand, 36982346 - 36982441
Alignment:
Q  56 ttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    ||||||||||||  ||  ||||||||||  ||||| ||||||  |||||||||| ||||||| | |||||| || |||||||||||||||||||||    
T  36982346 ttagatgagatgacacaggtctcttctagtttaaccaaggtctcgggttcgaattcagccttagacatgcaacaacgttaaaactcttagggagag 36982441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 7242912 - 7242862
Alignment:
Q  101 ggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  7242912 ggttcgaatccagtcttggacatgcagcaacgttaaaactcttagggagag 7242862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 31733820 - 31733746
Alignment:
Q  77 tcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    |||||||||||||| || ||  ||||||||||| |||| || |||||||||||  ||||||||||||||||||||    
T  31733820 tcttctaacttaaccaatgttttgggttcgaattcagcattaggcatgcagcagagttaaaactcttagggagag 31733746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 39547471 - 39547405
Alignment:
Q  99 tgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctattt 165  Q
    ||||||||||||||| |||| ||||||||||  || ||||||||||||| ||| |||||||||||||    
T  39547471 tgggttcgaatccagtcttgagcatgcagcagtgtcaaaactcttagggggagtctgccgcctattt 39547405  T

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Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25298194 - 25298149
Alignment:
Q  1 ttgtagctttcaagttatagcaaaccaaacattatttattgcaatg 46  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||    
T  25298194 ttgttgctttcaagttataacaaaccaaacattatttattgcaatg 25298149  T

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Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 14500417 - 14500361
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggt 103  Q
    |||||| ||||||||| ||||||||| |||||||||| |||||| ||||||||||||    
T  14500417 caagagtgcttagatgcgatggaacgggtctcttctagcttaaccaaggtcctgggt 14500361  T

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Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 36806649 - 36806713
Alignment:
Q  103 ttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctatttgg 167  Q
    ||||||| ||||||||||||| ||| | ||||||||||||||||||| | |||||||| ||||||    
T  36806649 ttcgaattcagccttgggcatacagtagcgttaaaactcttagggagtgtctgccgcccatttgg 36806713  T

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Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 10303107 - 10303194
Alignment:
Q  58 agatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttag 145  Q
    ||||||||||| || | ||| ||||| ||||||||| ||| || ||||||||||||| || | |||||| || |||||||||||||||    
T  10303107 agatgagatggcacaaatctattctagcttaactaaagtcttgagttcgaatccagctttagacatgcaacaacgttaaaactcttag 10303194  T

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Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 148
Target Start/End: Original strand, 52912607 - 52912702
Alignment:
Q  51 agcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttaggga 148  Q
    |||| ||| ||||||||||||| ||||||  || |||||| ||| || ||||||||||||||| |||  ||||| |||| |||||||||||| |||||    
T  52912607 agcgtttaaatgagatggaacgggtctctattagcttaaccaagatcttgggttcgaatccagtctt--gcatgtagcaacgttaaaactctcaggga 52912702  T

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Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 9066208 - 9066120
Alignment:
Q  51 agcgcttagatgagatgg--aacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaa 137  Q
    |||||||||| |||||||  |||||||||||||||  ||||| || ||  ||| ||||||||||| |||||| |||||||| |||||||    
T  9066208 agcgcttagaagagatggggaacgagtctcttctagtttaaccaaagttttggattcgaatccagtcttgggtatgcagcaacgttaaa 9066120  T

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Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 144
Target Start/End: Original strand, 36086843 - 36086936
Alignment:
Q  51 agcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactctta 144  Q
    |||| ||||||||||||  | ||||||||| ||  ||||| ||||||||| |||||||||||| |||| ||||||| |   |||||||||||||    
T  36086843 agcgtttagatgagatgacaagagtctcttttagtttaacaaaggtcctgagttcgaatccagtcttgcgcatgcaaccatgttaaaactctta 36086936  T

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Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 13546436 - 13546512
Alignment:
Q  75 tctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||   |||| | ||  ||||||||||||| ||||||    
T  13546436 tctcttctaacttaactaaagtcgtgggttcgaatccagtcttatacatgtaacaatgttaaaactcttatggagag 13546512  T

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Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 46864125 - 46864193
Alignment:
Q  99 tgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctatttgg 167  Q
    ||||||| |||||||| |||||||||||| | |||||||| ||||||||||| | ||||| | ||||||    
T  46864125 tgggttcaaatccagctttgggcatgcagtagcgttaaaattcttagggagaacttgccgtccatttgg 46864193  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 7624859 - 7624935
Alignment:
Q  49 agagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgca 126  Q
    |||||| ||| |||||||||||| ||||| ||||| |||||| ||| |  ||||||| ||||||||||||| ||||||    
T  7624859 agagcgtttaaatgagatggaacaagtct-ttctagcttaaccaagattatgggttcaaatccagccttggacatgca 7624935  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 32534065 - 32534170
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagg 146  Q
    ||||| || |||||||| |||  ||| || ||||||| |||||| |||||  ||| ||| ||| |||| ||| ||||||| || |||||||||||||||     
T  32534065 caagatcgtttagatgatatgacacgggtttcttctagcttaaccaaggttttggattcaaattcagctttgagcatgcaacaacgttaaaactcttaga 32534164  T
Q  147 gagagc 152  Q
    ||||||    
T  32534165 gagagc 32534170  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 151
Target Start/End: Original strand, 46411652 - 46411733
Alignment:
Q  70 acgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagag 151  Q
    ||||||||||||||| |||| ||| ||| || |||||||| || ||||  ||||| ||||  |||||||||| |||||||||    
T  46411652 acgagtctcttctaatttaattaatgtcttgagttcgaattcaaccttaagcatgtagcaaagttaaaactcatagggagag 46411733  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 351
Target Start/End: Complemental strand, 8464265 - 8464237
Alignment:
Q  323 gtgacaattaaaaaggaacggaagtagta 351  Q
    |||||||||||||||||||||||||||||    
T  8464265 gtgacaattaaaaaggaacggaagtagta 8464237  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 21774592 - 21774667
Alignment:
Q  53 cgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagca 129  Q
    ||||||||||||||| | |  |||||||||| |||||  |||||  ||||||||||||||| ||||| |||||||||    
T  21774592 cgcttagatgagatgca-catgtctcttctagcttaatcaaggttttgggttcgaatccagtcttggacatgcagca 21774667  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 114
Target Start/End: Complemental strand, 38465799 - 38465759
Alignment:
Q  74 gtctcttctaacttaactaaggtcctgggttcgaatccagc 114  Q
    ||||||||||  ||||||||||| |||||||||||||||||    
T  38465799 gtctcttctagtttaactaaggttctgggttcgaatccagc 38465759  T

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Target: scaffold0020 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 167837 - 167917
Alignment:
Q  47 caagagcgcttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagca 129  Q
    ||||||||||||||||||||| |||| |||||||||| |||||  ||||||  |||||| |||||||||||||||||||||||    
T  167837 caagagcgcttagatgagatgaaacgggtctcttctagcttaatcaaggtc--gggttcaaatccagccttgggcatgcagca 167917  T

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Target: scaffold0009 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 140
Target Start/End: Complemental strand, 32414 - 32330
Alignment:
Q  56 ttagatgagatggaacgagtctcttctaacttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaact 140  Q
    |||||| |||||||||| |||||||||| ||| || ||||| |||||||||||||||  |||||| |||||||| ||||||||||    
T  32414 ttagataagatggaacgggtctcttctagcttcaccaaggttctgggttcgaatccaatcttgggtatgcagcagcgttaaaact 32330  T

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Target: scaffold0009; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 27296 - 27228
Alignment:
Q  135 aaaactcttagggagagcctgccgcctatttggatgt---gatgctcgaggaattagtcttcgcagttg 200  Q
    |||||||||||||||||| ||||||| |||||||| |   ||||||||||| |||||||||||||||||    
T  27296 aaaactcttagggagagcttgccgcccatttggatctcacgatgctcgagggattagtcttcgcagttg 27228  T

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Target: scaffold0189 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 165
Target Start/End: Original strand, 10973 - 11052
Alignment:
Q  86 ttaactaaggtcctgggttcgaatccagccttgggcatgcagcatcgttaaaactcttagggagagcctgccgcctattt 165  Q
    |||||||||||||| ||||||||||||   ||||||||||| ||  ||||||||||||| ||||||  ||||||| ||||    
T  10973 ttaactaaggtcctaggttcgaatccatttttgggcatgcaacaatgttaaaactcttacggagagtttgccgcccattt 11052  T

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