View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20253_low_8 (Length: 279)
Name: NF20253_low_8
Description: NF20253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20253_low_8 |
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Alignment Details
Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 7 - 264
Target Start/End: Complemental strand, 113455 - 113198
Alignment:
| Q |
7 |
ttgcaatcttcaatcacgagtcttactttaaaatttccccaccactctattaaacattctctttagttttgtaatactactcaacaccaacggtttataa |
106 |
Q |
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| T |
113455 |
ttgcaatcttcagtcacgagtcttgctttaaaatttccccaccactctattaaacattctctttagttttgtaatactactcaacaccaatggtttataa |
113356 |
T |
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| Q |
107 |
tccttggatagttccgaggattgttattcacaattgatttgatctcctatttcatgacatgcctcatattttatcttttataatgtcgtcaaaaccaaaa |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |
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| T |
113355 |
tccttggatagttccgaggattgttattcacaattgatttgatctcctatttcatgacttgcctcatattttatctttcataatgtcgtcaaaaccaaaa |
113256 |
T |
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| Q |
207 |
gggtttgctatctaccaaaaaccaatatttaaggttaagactaaatatcccttcataa |
264 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
113255 |
gggtttgctatctaccaaaaaccaatattcaaggttaagactaaatatcccttcataa |
113198 |
T |
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