View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20254_high_25 (Length: 281)
Name: NF20254_high_25
Description: NF20254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20254_high_25 |
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Alignment Details
Target: chr1 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 42486722 - 42486989
Alignment:
| Q |
1 |
gctttgtcttatttttcatttatcttccctatatagtcgatgatgaaaaattaatatgatcaaggagatggtagtgacacctaaatttgtgtcttatgtt |
100 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
42486722 |
gctttgtcttatttttcatttagcttccctatatagtcgatgatgaaaaattaatatgatccaggagatggtagtgacacctaaatttgtgtcttatgtt |
42486821 |
T |
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| Q |
101 |
tagaaaattaaacatcatatatattacagaatatggttgtttggggaccatgatgaactttcactttccaattaattttggctaaatataaggttgtgaa |
200 |
Q |
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|||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42486822 |
tagaaaattaaacatcatatatattataggatatggttgtttggggaccatgatgaactttcactttccaattaattttggctaaatataaggttgtgaa |
42486921 |
T |
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| Q |
201 |
tatgaacatgcagaaggaaaaaacaacttaatgcaatgatgcatcacaatcaaatgagatgtatataa |
268 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42486922 |
tatgaacatgcagaaggaaaaaacaacttaatgcaatgatgcatcacaatcaaatgagatgtatataa |
42486989 |
T |
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