View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20254_high_27 (Length: 243)
Name: NF20254_high_27
Description: NF20254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20254_high_27 |
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Alignment Details
Target: chr7 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 54 - 227
Target Start/End: Original strand, 10688550 - 10688712
Alignment:
| Q |
54 |
ttttaaaacgagaaatatgattaaccataaccaaacacagttcaagtccaccaaagtaaagttcagttctcctttctagagaaccctaatgggctgtctc |
153 |
Q |
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| T |
10688550 |
ttttaaaacgagaaatatgattaaccataaccaaacacagttcaagtccaccaaagtaaagttcagttctcctttctag-----------gggctgtctc |
10688638 |
T |
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| Q |
154 |
caaaagttcaacaacgacaccggtcgcactcaaatctagcaagttaattattcaaatgtggacgacatgctctt |
227 |
Q |
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|||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
10688639 |
caaaagttcaacaacgacgccggtcgcactcaaatctcgcaagttaattattcaaatgtggacgacatgctctt |
10688712 |
T |
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