View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20256_low_2 (Length: 251)
Name: NF20256_low_2
Description: NF20256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20256_low_2 |
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Alignment Details
Target: chr1 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 234
Target Start/End: Original strand, 12562874 - 12563087
Alignment:
| Q |
21 |
tcagcgacatgtctagtagtgttcgtgtgtcagtgcttcatagcacacaacactcacacaaattattattggtatcaatttcttttccatttagtgtggt |
120 |
Q |
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| T |
12562874 |
tcagcgacatgtctagtagtgttcgtgtgtcagtgcttcatagcacacaacactcacacaaattattattggtatcaatttcttttccatagagtgtggt |
12562973 |
T |
|
| Q |
121 |
ctcttaccaattttgtgtttgtttgacatgctcctatctgaataattagaaagaaaatcctggcttctcatgctgagatatataacctgtttattttgta |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
12562974 |
ctcttaccaattttgtgtttgtttgacatgctcctatctgaataattagaaagaaaatcctggcttctcatgctgagacatataacctgtttattttgta |
12563073 |
T |
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| Q |
221 |
ctttctaaattcat |
234 |
Q |
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|||||||||||||| |
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| T |
12563074 |
ctttctaaattcat |
12563087 |
T |
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