View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20259_high_8 (Length: 241)
Name: NF20259_high_8
Description: NF20259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20259_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 17 - 227
Target Start/End: Complemental strand, 11199176 - 11198966
Alignment:
| Q |
17 |
atgaagcttttgaaatcttgaggtcaatgccaattgaagtagattcagataccttaggagcatttattggatcttgcaaactacattcaaatatggaact |
116 |
Q |
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| T |
11199176 |
atgaagcttttgaaatcttgaggtcaatgccaattgaagtagattcagataccttaggagcatttattggatcttgcaaactacattcaaatatggaact |
11199077 |
T |
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| Q |
117 |
ggctaaattggctgcagaaaaactcttcctcattgaaccagaaaagagtgtaaactatgcagtgatgtcgaacattttcgcttctcaaaagcattggtat |
216 |
Q |
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| T |
11199076 |
ggctaaattggctgcagaaaaactcttcctcattgaaccagaaaagagtgtaaactatgcagtgatgtcgaacattttcgcttctcaaaagcattggtat |
11198977 |
T |
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| Q |
217 |
gacgtggaaag |
227 |
Q |
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| T |
11198976 |
gacgtggaaag |
11198966 |
T |
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