View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20259_low_6 (Length: 272)
Name: NF20259_low_6
Description: NF20259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20259_low_6 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 241; Significance: 1e-133; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 17 - 257
Target Start/End: Complemental strand, 16662167 - 16661927
Alignment:
| Q |
17 |
agttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaag |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16662167 |
agttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaag |
16662068 |
T |
|
| Q |
117 |
tcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagat |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16662067 |
tcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagat |
16661968 |
T |
|
| Q |
217 |
caaagacaaaaatatttctttcaccatcacaattacttctt |
257 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16661967 |
caaagacaaaaatatttctttcaccatcacaattacttctt |
16661927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 16 - 256
Target Start/End: Complemental strand, 16657693 - 16657453
Alignment:
| Q |
16 |
cagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaa |
115 |
Q |
| |
|
||||||||||||||||||||||||||| |||| | | || ||||| || |||||| | | ||| || | ||||||||||||| | ||||||||||||| |
|
|
| T |
16657693 |
cagttctcaacctcctcaaggctcttgagttcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaa |
16657594 |
T |
|
| Q |
116 |
gtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaaga |
215 |
Q |
| |
|
|||||||||||| |||||||||||||| | ||||||||| || ||||| |||||||| |||||||| |||| ||||||||||||||| ||||| ||||| |
|
|
| T |
16657593 |
gtcctctcccccaaggtgagtgtttccggcagtggcttttacctcaaaaacatcacccttaattgtaaggatagacacatcaaaagtaccaccgccaagg |
16657494 |
T |
|
| Q |
216 |
tcaaagacaaaaatatttctttcaccatcacaattacttct |
256 |
Q |
| |
|
||||||||||||||||| | || ||||||||||| |||||| |
|
|
| T |
16657493 |
tcaaagacaaaaatattccgtttaccatcacaatcacttct |
16657453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 249
Target Start/End: Original strand, 12234681 - 12234914
Alignment:
| Q |
16 |
cagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaa |
115 |
Q |
| |
|
||||||| ||||||||||||||| ||||||| | | | || |||||||| ||||| ||||| || |||| ||| |||||| | ||||||||||||||| |
|
|
| T |
12234681 |
cagttcttaacctcctcaaggcttttggatttccactcatgtccacttttttctttctattgaactcttgagcaaggtagtttaccattctgttatcaaa |
12234780 |
T |
|
| Q |
116 |
gtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaaga |
215 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||| ||||| || ||| |
|
|
| T |
12234781 |
gtcctctcccccgaggtgagtgtttccggctgtggctttaacttggaagacattacctttgattgttaggagagacacatcaaaagtgccaccgccgaga |
12234880 |
T |
|
| Q |
216 |
tcaaagacaaaaatatttctttcaccatcacaat |
249 |
Q |
| |
|
||||| ||||||||||||| ||| ||| |||||| |
|
|
| T |
12234881 |
tcaaaaacaaaaatatttcgttctccaacacaat |
12234914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 232
Target Start/End: Complemental strand, 12258751 - 12258541
Alignment:
| Q |
22 |
tcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaagtcctc |
121 |
Q |
| |
|
|||| |||||||| ||||||||||| | | | ||||| ||||||||||| || || || |||| |||||||| ||| |||||| |||||||||||||| |
|
|
| T |
12258751 |
tcaatctcctcaaagctcttggatttccacttatatctactttgttctttctcttgaactcttctacaaagtaactcaccattctattatcaaagtcctc |
12258652 |
T |
|
| Q |
122 |
tcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaag |
221 |
Q |
| |
|
||| || ||||| |||||||||| || || ||||||| |||||||| | | ||||| || || ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
12258651 |
tcctccaaggtgcgtgtttccagctgtagccttaacttgaaagacattatccttaatggttagtagagacacatcaaaagtgccaccaccaagatcaaag |
12258552 |
T |
|
| Q |
222 |
acaaaaatatt |
232 |
Q |
| |
|
||||||||||| |
|
|
| T |
12258551 |
acaaaaatatt |
12258541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 7542218 - 7542436
Alignment:
| Q |
16 |
cagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaa |
115 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| | | || |||||||||||||| || || || |||| |||||||||||| |||||| |||||||| |
|
|
| T |
7542218 |
cagttctcaacctcctcaaggcttttggattcccactaatgtccactttgttctttctcttgaactcttgtacaaagtagttcgccattctattatcaaa |
7542317 |
T |
|
| Q |
116 |
gtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaaga |
215 |
Q |
| |
|
||| ||||| || ||||||||||| |||| |||||| ||||||| ||| | || ||||| || || | ||||||||||||||| ||||| |||||| |
|
|
| T |
7542318 |
gtcttctccaccaaggtgagtgttgccagcagtggccttaacttggaagttgttgcccttaatcgttagtaaagacacatcaaaagtgccaccgccaaga |
7542417 |
T |
|
| Q |
216 |
tcaaagacaaaaatatttc |
234 |
Q |
| |
|
||||| ||||||||||||| |
|
|
| T |
7542418 |
tcaaaaacaaaaatatttc |
7542436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 14703402 - 14703616
Alignment:
| Q |
18 |
gttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaagt |
117 |
Q |
| |
|
|||||||| ||||| |||||| ||||||| | | | || |||| | |||| || || || || |||| ||||||||||||| |||||||||||| |||| |
|
|
| T |
14703402 |
gttctcaagctccttaaggcttttggatttccactaatgtccaatctgttttttctcttgaactcttgaacaaagtagttcaccattctgttatcgaagt |
14703501 |
T |
|
| Q |
118 |
cctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatc |
217 |
Q |
| |
|
||||||||||||||||||||||||||| ||| || |||| || ||||| || |||||||| ||||||||||| |||||||| |||||||||||||| |
|
|
| T |
14703502 |
cctctcccccgaggtgagtgtttccagcagtagccttaatttggaagacggtgcccttaattgttaggagagacacgtcaaaagtaccaccaccaagatc |
14703601 |
T |
|
| Q |
218 |
aaagacaaaaatatt |
232 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
14703602 |
aaagacaaatatatt |
14703616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 256
Target Start/End: Original strand, 43625442 - 43625644
Alignment:
| Q |
54 |
atatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctt |
153 |
Q |
| |
|
|||||||| ||||||||| | | |||||||| |||||||||||| |||||| | ||||||||||||||| || |||||||||||||||| |||||||| |
|
|
| T |
43625442 |
atatccacattgttcttcttctcaaattcttctgcaaagtagttcaccattctatcatcaaagtcctctcctccaaggtgagtgtttccagcagtggctt |
43625541 |
T |
|
| Q |
154 |
taacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatttctttcaccatcacaattact |
253 |
Q |
| |
|
|||| ||||| | | |||||||| || | ||||||||||||||| ||||||||||| ||||||| |||||||||| ||| ||| |||||||| | |
|
|
| T |
43625542 |
taacacggaagaccttgtccttaattgtaagtatagacacatcaaaagtaccaccaccaaggtcaaagatgaaaatatttcgttctccaacacaattaat |
43625641 |
T |
|
| Q |
254 |
tct |
256 |
Q |
| |
|
||| |
|
|
| T |
43625642 |
tct |
43625644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 12245510 - 12245349
Alignment:
| Q |
88 |
caaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggag |
187 |
Q |
| |
|
|||||||||| | |||||| |||||||| |||||||| || |||||||||||||||| |||||| ||||||| |||| | | | ||||| || |||| |
|
|
| T |
12245510 |
caaagtagtttaccattctattatcaaaatcctctcctccaaggtgagtgtttccagcagtggccttaacttggaagatgttatccttaatagttaggat |
12245411 |
T |
|
| Q |
188 |
agacacatcaaaagtcccaccaccaagatcaaagacaaaaatatttctttcaccatcacaat |
249 |
Q |
| |
|
||| || |||||||| ||||||||||||||||| |||||||| |||||||| ||| |||||| |
|
|
| T |
12245410 |
agaaacgtcaaaagtgccaccaccaagatcaaacacaaaaatgtttctttctccaacacaat |
12245349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 249
Target Start/End: Original strand, 11999478 - 11999619
Alignment:
| Q |
108 |
ttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccac |
207 |
Q |
| |
|
|||||||| |||||||| |||| |||||||||||||| ||||| ||||||| ||||||| | |||||||| || | ||||| ||||||||| |||| |
|
|
| T |
11999478 |
ttatcaaaatcctctcctccgaagtgagtgtttccagctgtggccttaacttggaagacattgtccttaattgttagtatagacaaatcaaaagtgccac |
11999577 |
T |
|
| Q |
208 |
caccaagatcaaagacaaaaatatttctttcaccatcacaat |
249 |
Q |
| |
|
| |||||||||||||| ||||| |||||||| ||| |||||| |
|
|
| T |
11999578 |
cgccaagatcaaagactaaaatgtttctttctccaacacaat |
11999619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 151; Significance: 6e-80; HSPs: 29)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 8585880 - 8585646
Alignment:
| Q |
18 |
gttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaagt |
117 |
Q |
| |
|
||||| |||| |||||| |||||||| ||| |||| |||||||| |||||||| || |||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
8585880 |
gttcttaaccgcctcaaagctcttgggttcttagtaatatccacattgttctttctcttaaattcctcaacaaagtagttcaacattctgttatcaaagt |
8585781 |
T |
|
| Q |
118 |
cctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatc |
217 |
Q |
| |
|
|| ||||||| |||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8585780 |
cccctcccccaaggtgagtatttccagcggttgctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatc |
8585681 |
T |
|
| Q |
218 |
aaagacaaaaatatttctttcaccatcacaattac |
252 |
Q |
| |
|
||| ||||||||||||| |||||||||||| |||| |
|
|
| T |
8585680 |
aaacacaaaaatatttcgttcaccatcacagttac |
8585646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 100 - 247
Target Start/End: Original strand, 8628608 - 8628755
Alignment:
| Q |
100 |
acattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaa |
199 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8628608 |
acattctgttatcaaagtcctctccaccaaggtgagtatttccagcagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaa |
8628707 |
T |
|
| Q |
200 |
agtcccaccaccaagatcaaagacaaaaatatttctttcaccatcaca |
247 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
8628708 |
agtcccaccaccaagatcaaacacaaaaatatttcgttcaccatcaca |
8628755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 16 - 256
Target Start/End: Complemental strand, 10494550 - 10494310
Alignment:
| Q |
16 |
cagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaa |
115 |
Q |
| |
|
|||||||||||||||| |||| | ||||||||| | |||| ||||| || |||||| | || || || | ||||| || |||| |||||||||||| || |
|
|
| T |
10494550 |
cagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaa |
10494451 |
T |
|
| Q |
116 |
gtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaaga |
215 |
Q |
| |
|
|||||||||||| ||||||||||| || | ||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||| ||| |
|
|
| T |
10494450 |
gtcctctcccccaaggtgagtgttacctgcagtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccaga |
10494351 |
T |
|
| Q |
216 |
tcaaagacaaaaatatttctttcaccatcacaattacttct |
256 |
Q |
| |
|
||||||||||||||||||| | ||| ||||||| |||||| |
|
|
| T |
10494350 |
tcaaagacaaaaatatttcggttaccctcacaatcacttct |
10494310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 8659355 - 8659586
Alignment:
| Q |
16 |
cagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaa |
115 |
Q |
| |
|
|||||||||||||||| |||| | |||| || | | | || |||||||| |||||| | || || || | ||||||||||||| ||||||| ||||||| |
|
|
| T |
8659355 |
cagttctcaacctccttaaggattttgggttaccactaatgtccactttattcttctttttgaactcctctacaaagtagttcaccattctgctatcaaa |
8659454 |
T |
|
| Q |
116 |
gtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaaga |
215 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||| ||||||||||||||| |||||||||||| |
|
|
| T |
8659455 |
gtcctctcctccaaggtgagtgtttccagaagtggcttttacttcaaagacatcacccttcattgtaaggatagacacatcaaaagtaccaccaccaaga |
8659554 |
T |
|
| Q |
216 |
tcaaagacaaaaatatttctttcaccatcaca |
247 |
Q |
| |
|
|||||||| ||||||||| || ||||||||| |
|
|
| T |
8659555 |
tcaaagaccaaaatattttgtttaccatcaca |
8659586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 8667411 - 8667629
Alignment:
| Q |
16 |
cagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaa |
115 |
Q |
| |
|
|||||||||||||||| |||| | |||| ||| | |||| |||||||| |||||| | || || || | ||||| ||||||| |||||||||||| || |
|
|
| T |
8667411 |
cagttctcaacctccttaaggattttgggttctgactgatgtccactttattcttcttttttaactcctcaacaaaatagttcaccattctgttatcgaa |
8667510 |
T |
|
| Q |
116 |
gtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaaga |
215 |
Q |
| |
|
|||||| ||||| |||||||||||||| | ||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||| ||| |
|
|
| T |
8667511 |
gtcctcgcccccaaggtgagtgtttcctgcagtggctttcacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtcccgccacccaga |
8667610 |
T |
|
| Q |
216 |
tcaaagacaaaaatatttc |
234 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
8667611 |
tcaaagacaaaaatatttc |
8667629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 249
Target Start/End: Complemental strand, 13333632 - 13333399
Alignment:
| Q |
16 |
cagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaa |
115 |
Q |
| |
|
|||||||||||||||| |||| | |||| |||| | ||||||| || || |||||| | || || || | ||||| ||||||| |||||||||||| || |
|
|
| T |
13333632 |
cagttctcaacctccttaaggattttgggttcccactgatatcgacgttattcttctttttgaactcctcaacaaaatagttcaccattctgttatcgaa |
13333533 |
T |
|
| Q |
116 |
gtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaaga |
215 |
Q |
| |
|
||| |||||||| |||||||||||||| | |||||||| ||||||||||||||||| ||||||| |||| ||||||||||||||| |||||||| ||| |
|
|
| T |
13333532 |
gtcttctcccccaaggtgagtgtttcctgcggtggcttttacttcaaagacatcacccataattgtaaggatagacacatcaaaagtaccaccacccaga |
13333433 |
T |
|
| Q |
216 |
tcaaagacaaaaatatttctttcaccatcacaat |
249 |
Q |
| |
|
||||||||||||||||||| | ||||||||||| |
|
|
| T |
13333432 |
tcaaagacaaaaatatttcgcttaccatcacaat |
13333399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 87 - 255
Target Start/End: Original strand, 8654513 - 8654681
Alignment:
| Q |
87 |
acaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgagga |
186 |
Q |
| |
|
|||||||||| || |||||||||||||||||| |||||||| ||||| |||||||||| ||||||||| || |||||||||||||| ||||||||||| | |
|
|
| T |
8654513 |
acaaagtagtacaccattctgttatcaaagtcttctccccctaggtgcgtgtttccagcagtggcttttacgtcaaagacatcacccttaattgtgagta |
8654612 |
T |
|
| Q |
187 |
gagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatttctttcaccatcacaattacttc |
255 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| || |||||||| | || ||||||| | ||||||| |
|
|
| T |
8654613 |
tagacacatcaaaagtaccaccaccaagatcaaataccaaaatattccgtttaccatcatagttacttc |
8654681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 8646871 - 8647067
Alignment:
| Q |
18 |
gttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaagt |
117 |
Q |
| |
|
|||||||||||||| |||||||||| || | ||| || ||||| ||||||||| | |||||||||| |||||| || || |||||| ||||||||| |
|
|
| T |
8646871 |
gttctcaacctccttaaggctcttgagtttccagtaatgtccaccttgttcttcttgttaaattcttgtgcaaagtggtccaccattctactatcaaagt |
8646970 |
T |
|
| Q |
118 |
cctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaag |
214 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||||||| | |||||| | | | |||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
8646971 |
cctctcctccgaggtgagtgtttccagcggtggctttaacatgaaagaccttatccttaattgtaaggagagacacatcaaaagttccaccaccaag |
8647067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 235
Target Start/End: Original strand, 8545625 - 8545844
Alignment:
| Q |
16 |
cagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaa |
115 |
Q |
| |
|
||||||||||||||||||||||| ||| |||| | | |||||| | ||||||||||| || || || ||||||||||| |||| ||||||||||||||| |
|
|
| T |
8545625 |
cagttctcaacctcctcaaggcttctgggttccgactaatatcctcattgttcttcctcttgaactccttcacaaagtaattcaccattctgttatcaaa |
8545724 |
T |
|
| Q |
116 |
gtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaaga |
215 |
Q |
| |
|
||| || || || |||| ||||| ||||| |||||| || || |||||||| | | ||||||||| || | ||||||||||||||| ||||| ||||| |
|
|
| T |
8545725 |
gtcttcaccgcctaggtaagtgtctccagcagtggccttgacatcaaagaccttatttttaattgtaagaatagacacatcaaaagttccaccgccaagg |
8545824 |
T |
|
| Q |
216 |
tcaaagacaaaaatatttct |
235 |
Q |
| |
|
||||||| |||||||||||| |
|
|
| T |
8545825 |
tcaaagataaaaatatttct |
8545844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 62 - 235
Target Start/End: Original strand, 8559371 - 8559544
Alignment:
| Q |
62 |
tttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttca |
161 |
Q |
| |
|
|||||||||||| | ||| ||||| ||||||| |||| |||||||||||||||||||||||| |||||||| |||| ||| |||||||| || |||||| |
|
|
| T |
8559371 |
tttgttcttcctctcaaactcttttacaaagtgtttcaccattctgttatcaaagtcctctcctccgaggtgtgtgtctccggaagtggccttgacttca |
8559470 |
T |
|
| Q |
162 |
aagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatttct |
235 |
Q |
| |
|
|||| || | ||||||||||| ||||| ||||||||||| |||||||| |||||||||| ||||||||||| |
|
|
| T |
8559471 |
aagagattattcttaattgtgagaagagaaacatcaaaagttccaccaccgagatcaaagatgaaaatatttct |
8559544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 232
Target Start/End: Complemental strand, 27831049 - 27830835
Alignment:
| Q |
18 |
gttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaagt |
117 |
Q |
| |
|
||||||| |||||||||||||||||| |||| | | || |||||| | |||||| | || || | | |||||| ||||||| ||| || |||||||||| |
|
|
| T |
27831049 |
gttctcagcctcctcaaggctcttgggttcccactaatgtccactcttttcttcttcttgaacacctccacaaaatagttcaccatcctattatcaaagt |
27830950 |
T |
|
| Q |
118 |
cctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatc |
217 |
Q |
| |
|
||||||| || |||||||||||||||| ||| || ||||||| ||||| | | | |||||||| | ||||||||||||||||||||||||||||| || |
|
|
| T |
27830949 |
cctctccaccaaggtgagtgtttccagcagttgccttaacttggaagaccttatccttaattgtaacaagagacacatcaaaagtcccaccaccaaggtc |
27830850 |
T |
|
| Q |
218 |
aaagacaaaaatatt |
232 |
Q |
| |
|
||| ||||||||||| |
|
|
| T |
27830849 |
aaacacaaaaatatt |
27830835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 87 - 256
Target Start/End: Original strand, 1301523 - 1301692
Alignment:
| Q |
87 |
acaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgagga |
186 |
Q |
| |
|
||||||||| ||| |||||| ||||||||||||||||| || |||||||| |||||| ||||||||| |||||||||||||| || || || || |||| |
|
|
| T |
1301523 |
acaaagtagctcaccattctattatcaaagtcctctcctccaaggtgagtatttccaccagtggcttttacttcaaagacatcgcccttgatggtaagga |
1301622 |
T |
|
| Q |
187 |
gagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatttctttcaccatcacaattacttct |
256 |
Q |
| |
|
||||||||||||||| ||||| ||||| |||||||| |||||||| | || ||||||||| | |||||| |
|
|
| T |
1301623 |
tagacacatcaaaagtaccaccgccaaggtcaaagaccaaaatattccgtttaccatcacagtcacttct |
1301692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 238
Target Start/End: Original strand, 6789504 - 6789726
Alignment:
| Q |
16 |
cagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaa |
115 |
Q |
| |
|
||||||||||||| || ||||| |||| || | ||| |||||||||||||||||||| ||||| || | |||||||||| | || || ||||||||| |
|
|
| T |
6789504 |
cagttctcaaccttcttaaggcccttgagtttccagtaatatccactttgttcttcctcttaaactcctctgcaaagtagtttaccaatcggttatcaaa |
6789603 |
T |
|
| Q |
116 |
gtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaaga |
215 |
Q |
| |
|
||||||||| |||||||||||||||||| ||||| ||||||| ||||| | | |||| ||||| | || ||||||||| ||||| ||||||||||| |
|
|
| T |
6789604 |
gtcctctcctccgaggtgagtgtttccaccggtggccttaacttggaagaccttatctttgattgttaagatagacacatcgaaagtgccaccaccaagg |
6789703 |
T |
|
| Q |
216 |
tcaaagacaaaaatatttctttc |
238 |
Q |
| |
|
|| ||||| ||||||||| |||| |
|
|
| T |
6789704 |
tcgaagacgaaaatatttttttc |
6789726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 56 - 222
Target Start/End: Original strand, 8590670 - 8590836
Alignment:
| Q |
56 |
atccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggcttta |
155 |
Q |
| |
|
||||||||| |||||||| |||| || ||||| || | || | |||||||||||||||||||||||| || ||||| || | ||| ||||||||||| |
|
|
| T |
8590670 |
atccactttattcttcctcctaaactccttcaccaaatggtgaaccattctgttatcaaagtcctctcctcctaggtgggtatctccggaagtggctttt |
8590769 |
T |
|
| Q |
156 |
acttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaaga |
222 |
Q |
| |
|
|| |||||| ||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8590770 |
acatcaaagctatcacctttgagtgtgagaagagacacatcaaaagtgccaccaccaagatcaaaga |
8590836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 101 - 235
Target Start/End: Complemental strand, 8636434 - 8636300
Alignment:
| Q |
101 |
cattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaa |
200 |
Q |
| |
|
|||||||||||||||||||||||| || ||||| |||| ||| | ||||||||||||||||||||| |||||||||||| |||| | |||||| || || |
|
|
| T |
8636434 |
cattctgttatcaaagtcctctcctccaaggtgtgtgtctccggcagtggctttaacttcaaagacttcacctttaattttgagtatagacacgtcgaat |
8636335 |
T |
|
| Q |
201 |
gtcccaccaccaagatcaaagacaaaaatatttct |
235 |
Q |
| |
|
|| ||||||||||||||||| || ||||| ||||| |
|
|
| T |
8636334 |
gtaccaccaccaagatcaaatacgaaaatgtttct |
8636300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 235
Target Start/End: Original strand, 8602037 - 8602185
Alignment:
| Q |
87 |
acaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgagga |
186 |
Q |
| |
|
||||||| ||||| ||||| |||||||||||||||||| || ||||| |||| ||| |||||||| || |||||||||| || | ||||||||||| | |
|
|
| T |
8602037 |
acaaagtggttcaccattcggttatcaaagtcctctcctccaaggtgtgtgtctccggaagtggccttgacttcaaagagattattcttaattgtgagaa |
8602136 |
T |
|
| Q |
187 |
gagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatttct |
235 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||| | ||||||||||| |
|
|
| T |
8602137 |
gagaaacatcaaaagttccaccaccaagatcaaatatgaaaatatttct |
8602185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 17268016 - 17268147
Alignment:
| Q |
101 |
cattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaa |
200 |
Q |
| |
|
|||||| |||||||||||||| ||||| || ||||||| |||| ||||| |||||||| ||||| | | | |||||||| | |||||||||||||||| |
|
|
| T |
17268016 |
cattctattatcaaagtcctcacccccaagatgagtgtctccaccggtggccttaacttcgaagaccttatccttaattgtaacgagagacacatcaaaa |
17268115 |
T |
|
| Q |
201 |
gtcccaccaccaagatcaaagacaaaaatatt |
232 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |
|
|
| T |
17268116 |
gtcccaccaccaaggtcaaagacaaaaatatt |
17268147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 8570305 - 8570522
Alignment:
| Q |
18 |
gttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaagt |
117 |
Q |
| |
|
||||| ||||||||||||||| |||| |||||| | |||||| | ||||||||| | || || | |||||||||| ||||||||||||||||||| | |
|
|
| T |
8570305 |
gttcttaacctcctcaaggcttttgggttcctactaatatcctcgttgttcttcttcttgaacttcttcacaaagtgagtcaacattctgttatcaaaat |
8570404 |
T |
|
| Q |
118 |
cctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatc |
217 |
Q |
| |
|
| || || || |||||||||| ||||| |||||| || |||||| || | | | |||| |||||| | ||||||||||||||| ||||| ||||| || |
|
|
| T |
8570405 |
cttcacctcccaggtgagtgtctccagcagtggccttgacttcatagttgttatccttaactgtgagaatagacacatcaaaagttccaccgccaaggtc |
8570504 |
T |
|
| Q |
218 |
aaagacaaaaatatttct |
235 |
Q |
| |
|
||||| |||||||||||| |
|
|
| T |
8570505 |
aaagataaaaatatttct |
8570522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 232
Target Start/End: Original strand, 17260304 - 17260449
Alignment:
| Q |
87 |
acaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgagga |
186 |
Q |
| |
|
||||| |||| || |||||| |||||||||||||| ||||| || ||||||| |||| ||||| |||||||| ||||| | | | |||||||| | || |
|
|
| T |
17260304 |
acaaaatagtacaccattctattatcaaagtcctcacccccaagatgagtgtctccaccggtggccttaacttcgaagaccttatccttaattgtaacga |
17260403 |
T |
|
| Q |
187 |
gagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatt |
232 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
17260404 |
gagacacatcaaaagtccccccaccaaggtcaaagacaaaaatatt |
17260449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 88 - 232
Target Start/End: Original strand, 3147328 - 3147472
Alignment:
| Q |
88 |
caaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggag |
187 |
Q |
| |
|
|||||||||||| ||| || |||||||||||||||||||| ||||| |||||||| | |||| ||||||| |||||| | | | |||||||| || || |
|
|
| T |
3147328 |
caaagtagttcaccatcctattatcaaagtcctctcccccaaggtgggtgtttcctgcgatggccttaacttgaaagaccttatccttaattgtaagaag |
3147427 |
T |
|
| Q |
188 |
agacacatcaaaagtcccaccaccaagatcaaagacaaaaatatt |
232 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||| ||||||||| |
|
|
| T |
3147428 |
agacacatcaaaagtcccaccacccaagtcaaagataaaaatatt |
3147472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 222
Target Start/End: Complemental strand, 29581970 - 29581811
Alignment:
| Q |
63 |
ttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaa |
162 |
Q |
| |
|
||||||||||| || || || ||| ||||||| |||| ||||| |||||||||||||||||| || |||||||| | |||| |||||| || ||||||| |
|
|
| T |
29581970 |
ttgttcttcctcttcaactcattcgcaaagtaattcaccattcggttatcaaagtcctctcctcctaggtgagtatcgccagcagtggccttcacttcaa |
29581871 |
T |
|
| Q |
163 |
agacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaaga |
222 |
Q |
| |
|
| |||| | || | |||||| ||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
29581870 |
acttatcatccttgagtgtgagaagagacacatcaaaagtgccaccaccaagatcaaaga |
29581811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 57 - 219
Target Start/End: Complemental strand, 7877868 - 7877706
Alignment:
| Q |
57 |
tccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaa |
156 |
Q |
| |
|
|||||||| |||||||| ||||| || |||| || | |||||||||||||||||||||||||||||| || |||||||| | ||| | ||| ||| | | |
|
|
| T |
7877868 |
tccactttattcttcctcttaaactccatcactaaatggttcaacattctgttatcaaagtcctctccacctaggtgagtatctccggcagtagctatta |
7877769 |
T |
|
| Q |
157 |
cttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaa |
219 |
Q |
| |
|
| |||||| |||| |||| | |||||| ||||||||||| ||||| |||||||||||||||| |
|
|
| T |
7877768 |
catcaaagctatcatcttttagtgtgagaagagacacatcgaaagtgccaccaccaagatcaa |
7877706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 87 - 235
Target Start/End: Complemental strand, 8382981 - 8382833
Alignment:
| Q |
87 |
acaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgagga |
186 |
Q |
| |
|
|||||||| |||| ||||||||||| ||||| || || || || ||||||| ||| | |||||| || || ||||||||| | ||||||||||||| |
|
|
| T |
8382981 |
acaaagtacttcacgattctgttatctaagtcttcacctcctagatgagtgtctccggcagtggccttcacaacaaagacattattcttaattgtgagga |
8382882 |
T |
|
| Q |
187 |
gagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatttct |
235 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
8382881 |
gagacacatcaaaagttccaccaccaagatcaaagatgaaaatatttct |
8382833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 29577807 - 29577642
Alignment:
| Q |
57 |
tccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaa |
156 |
Q |
| |
|
||||| ||||||||||| || || || |||||||||| | ||| |||| | ||||| ||||||||||| || |||||||| | |||| |||||| || | |
|
|
| T |
29577807 |
tccacattgttcttcctcttcaactcattcacaaagtggctcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggccttta |
29577708 |
T |
|
| Q |
157 |
cttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaaga |
222 |
Q |
| |
|
||||||| |||| | |||| |||||| |||||||||||||| || ||||||||||||||||||| |
|
|
| T |
29577707 |
cttcaaaactatcatccttaagtgtgagaagagacacatcaaaggtgccaccaccaagatcaaaga |
29577642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 84 - 235
Target Start/End: Original strand, 8609977 - 8610128
Alignment:
| Q |
84 |
ttcacaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtga |
183 |
Q |
| |
|
|||||||||| || | |||||||| ||||||||||||||| || |||||||| | ||||| ||| || || || || || ||| ||||||||||| |
|
|
| T |
8609977 |
ttcacaaagtgattaaccattctgtgatcaaagtcctctcctccaaggtgagtatctccagcagtagccttgacatcgaaagcattgtttttaattgtga |
8610076 |
T |
|
| Q |
184 |
ggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatttct |
235 |
Q |
| |
|
| | ||||||||| ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
8610077 |
gaacagacacatcgaaagtcccaccaccaagatcaaagataaaaatatttct |
8610128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 235
Target Start/End: Original strand, 8581762 - 8581911
Alignment:
| Q |
86 |
cacaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgagg |
185 |
Q |
| |
|
|||||||| |||| ||||||||||||||| || || || || |||||||||| ||||| |||||| || |||||| || | | | |||| |||||| |
|
|
| T |
8581762 |
cacaaagtgattcaccattctgttatcaaaatcttcccctcccaggtgagtgtctccagcagtggccttgacttcatagtcgttattcttaactgtgaga |
8581861 |
T |
|
| Q |
186 |
agagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatttct |
235 |
Q |
| |
|
| ||||||||||||||| ||||| ||||| ||||||| |||||||||||| |
|
|
| T |
8581862 |
atagacacatcaaaagttccacctccaaggtcaaagataaaaatatttct |
8581911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 251
Target Start/End: Original strand, 8576318 - 8576553
Alignment:
| Q |
16 |
cagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaa |
115 |
Q |
| |
|
|||||||||||||||| |||||| ||| |||| | | |||||| |||||| ||| | | || || || ||||||| | || |||| |||||||||| |
|
|
| T |
8576318 |
cagttctcaacctccttaaggcttttgaattctcactaatatcctctttgtacttgttcctgaactccttaacaaagtgatccaccattatgttatcaaa |
8576417 |
T |
|
| Q |
116 |
gtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaaga |
215 |
Q |
| |
|
||| | || || |||||||||| ||| | |||||| || ||||| ||||||| |||| |||||| | ||||||||||||||| ||||| ||||| |
|
|
| T |
8576418 |
gtcttggcctcctaggtgagtgtctccggcagtggccttgacttcgaagacattgttcttaactgtgagaatagacacatcaaaagttccaccgccaagg |
8576517 |
T |
|
| Q |
216 |
tcaaagacaaaaatatttctttcaccatcacaatta |
251 |
Q |
| |
|
||||||| |||||||||||||| | || |||||||| |
|
|
| T |
8576518 |
tcaaagataaaaatatttcttttatcaacacaatta |
8576553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 8616673 - 8616764
Alignment:
| Q |
16 |
cagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctg |
107 |
Q |
| |
|
||||| |||||| |||||| | |||||| |||||||| |||||||| ||||||||||| ||||| || | ||||||||||||||||||||| |
|
|
| T |
8616673 |
cagttttcaaccgcctcaacgatcttgggttcctagtaatatccacattgttcttcctcttaaaatcctcaacaaagtagttcaacattctg |
8616764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 222
Target Start/End: Original strand, 8538120 - 8538234
Alignment:
| Q |
108 |
ttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccac |
207 |
Q |
| |
|
||||||||||||||||| || |||||||| | ||| | |||||| || ||| |||| ||| | || | ||| |||||||| ||||||||||| |||| |
|
|
| T |
8538120 |
ttatcaaagtcctctcctccaaggtgagtatctccggcagtggccttgactgtaaaggcattattcttcaatgtaaggagagatacatcaaaagttccac |
8538219 |
T |
|
| Q |
208 |
caccaagatcaaaga |
222 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
8538220 |
caccaagatcaaaga |
8538234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 128; Significance: 3e-66; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 30775244 - 30775475
Alignment:
| Q |
16 |
cagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaa |
115 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| || || ||||| ||||||||| | |||||||| | |||||||| |||||||||||||||||||| |
|
|
| T |
30775244 |
cagttctcaactgtctcaaagctcttggattcccggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtaattcaacattctgttatcaaa |
30775343 |
T |
|
| Q |
116 |
gtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaaga |
215 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||| |||||||||||||| |||||| || |||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
30775344 |
gtcctctcccccgatgtgagtgtttccagcagttgctttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaaga |
30775443 |
T |
|
| Q |
216 |
tcaaagacaaaaatatttctttcaccatcaca |
247 |
Q |
| |
|
||||||||||||||||| || ||| ||||||| |
|
|
| T |
30775444 |
tcaaagacaaaaatattcctctcagcatcaca |
30775475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 247
Target Start/End: Complemental strand, 9336067 - 9335836
Alignment:
| Q |
16 |
cagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaa |
115 |
Q |
| |
|
|||||||||||||||| |||| | |||| ||| |||| |||||||| |||||| | || || |||| |||||| ||||| | ||||||||||||||| |
|
|
| T |
9336067 |
cagttctcaacctccttaaggattttgggttctgcttgatgtccactttattcttcttttttaactcttccacaaaatagttaaccattctgttatcaaa |
9335968 |
T |
|
| Q |
116 |
gtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaaga |
215 |
Q |
| |
|
|||||| || || ||||| |||||||| | |||||||| |||||||| | |||||| ||||||||||||| ||||||||||||||| || ||||| ||| |
|
|
| T |
9335967 |
gtcctcgcctccaaggtgcgtgtttcctgcggtggcttttacttcaaatagatcacccttaattgtgaggatagacacatcaaaagtaccgccacccaga |
9335868 |
T |
|
| Q |
216 |
tcaaagacaaaaatatttctttcaccatcaca |
247 |
Q |
| |
|
||||||||||||||||||| | ||||||||| |
|
|
| T |
9335867 |
tcaaagacaaaaatatttcggttaccatcaca |
9335836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 233
Target Start/End: Original strand, 35132454 - 35132657
Alignment:
| Q |
30 |
ctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaagtcctctcccccga |
129 |
Q |
| |
|
||||||||| ||| ||||| | | || || ||||||||||| || || || |||| ||||||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
35132454 |
ctcaaggcttttgaattcccactaatgtctactttgttctttctcttgaactcttgtacaaagtagttcaccattctgttatcaaagtcctctccaccga |
35132553 |
T |
|
| Q |
130 |
ggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaat |
229 |
Q |
| |
|
| ||||||||||| | |||||| ||||||| ||||||| | | ||||| || || | || ||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
35132554 |
gatgagtgtttccggcagtggccttaacttggaagacattatccttaatagtaagtattgaaacatcaaaagtgccaccaccaagatcgaagacaaaaat |
35132653 |
T |
|
| Q |
230 |
attt |
233 |
Q |
| |
|
|||| |
|
|
| T |
35132654 |
attt |
35132657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 104; Significance: 6e-52; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 15595026 - 15595257
Alignment:
| Q |
16 |
cagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaa |
115 |
Q |
| |
|
|||||||||| ||||||||||| ||||| |||| ||| |||||||||||||||||| | || ||||| | | |||||||||| | ||||||||||||||| |
|
|
| T |
15595026 |
cagttctcaatctcctcaaggcccttgggttcccagtaatatccactttgttcttcgtcttgaattcctgcgcaaagtagttgaccattctgttatcaaa |
15595125 |
T |
|
| Q |
116 |
gtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaaga |
215 |
Q |
| |
|
||||||||| || |||||||||||||| ||||| ||||||| ||||| | | |||||||| |||| ||||||||||||||| |||||||||||| |
|
|
| T |
15595126 |
gtcctctcctccaaggtgagtgtttccgcctgtggccttaacttggaagaccttgtccttaattgttaggatagacacatcaaaagtgccaccaccaaga |
15595225 |
T |
|
| Q |
216 |
tcaaagacaaaaatatttctttcaccatcaca |
247 |
Q |
| |
|
||||||||||||||||||||||| ||| |||| |
|
|
| T |
15595226 |
tcaaagacaaaaatatttctttctccaacaca |
15595257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 87 - 234
Target Start/End: Complemental strand, 4678663 - 4678516
Alignment:
| Q |
87 |
acaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgagga |
186 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| || |||||||||||||||| ||||||||| |||||||||||| |||| || ||| | |||| |
|
|
| T |
4678663 |
acaaagtagttcaccattctgttatcaaagtcctctccacctaggtgagtgtttccagcagtggcttttacttcaaagacaccacccttgattttaagga |
4678564 |
T |
|
| Q |
187 |
gagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatttc |
234 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||||| ||||||| |
|
|
| T |
4678563 |
tagacacatcaaaagtaccaccaccaaggtcaaagacaaatatatttc |
4678516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 88 - 234
Target Start/End: Complemental strand, 34466897 - 34466751
Alignment:
| Q |
88 |
caaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggag |
187 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||| | | |||||||| ||||| |
|
|
| T |
34466897 |
caaagtggttcgccattctattatcaaagtcctctcgtccgaggtgagtgttaccagaagtggccttaacttcaaagacattatccttaattgtaaggag |
34466798 |
T |
|
| Q |
188 |
agacacatcaaaagtcccaccaccaagatcaaagacaaaaatatttc |
234 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
34466797 |
agacacatcaaaagtcccaccaccaaggtcaaagacgaaaatatttc |
34466751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 229
Target Start/End: Original strand, 12528540 - 12528709
Alignment:
| Q |
60 |
actttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaactt |
159 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||| |||| ||||| ||||||||||||||||| || |||||||||| ||| | |||||| || |||| |
|
|
| T |
12528540 |
actttgttcttcctcttaaactctttcacaaagtgattcaccattcgattatcaaagtcctctcctccaaggtgagtgtctccggcagtggccttgactt |
12528639 |
T |
|
| Q |
160 |
caaagacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaat |
229 |
Q |
| |
|
| ||||||| | || | ||| || ||||||||||||||||| ||||| ||||| ||||| | |||||| |
|
|
| T |
12528640 |
cgaagacattattctttactgtaagaagagacacatcaaaagttccaccgccaaggtcaaaaataaaaat |
12528709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 43744810 - 43744943
Alignment:
| Q |
18 |
gttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaagt |
117 |
Q |
| |
|
|||||||||||||| || |||||||| || | ||| || ||||| ||||||||| | ||||| || | | |||||||||| ||| || |||||||| | |
|
|
| T |
43744810 |
gttctcaacctccttaatgctcttgggtttccagtaatgtccaccttgttcttcttcttaaactcctctgcgaagtagttcaccatcctattatcaaaat |
43744909 |
T |
|
| Q |
118 |
cctctcccccgaggtgagtgtttccagaagtggc |
151 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||| |
|
|
| T |
43744910 |
cctctcctccgaggtgagtgtttccagaggtggc |
43744943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 43744999 - 43745061
Alignment:
| Q |
174 |
ttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatttctt |
236 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| || ||||||| |||||||||||| |
|
|
| T |
43744999 |
ttaattgtaaggagagacacatcaaaagtcccaccacccaggtcaaagatgaaaatatttctt |
43745061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 28219912 - 28220038
Alignment:
| Q |
18 |
gttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaagt |
117 |
Q |
| |
|
|||||||||||||| |||||||||| || | ||| || ||||| ||||||||| | ||||| || | | |||||||||| ||| || ||||||||| |
|
|
| T |
28219912 |
gttctcaacctccttaaggctcttgagtttccagtaatgtccaccttgttcttcttcttaaactcctctgcgaagtagttcaccatcctactatcaaagt |
28220011 |
T |
|
| Q |
118 |
cctctcccccgaggtgagtgtttccag |
144 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
28220012 |
cctctcccccgaggtgagtgtttccag |
28220038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 28220110 - 28220161
Alignment:
| Q |
183 |
aggagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatttc |
234 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||| |||||||||| |
|
|
| T |
28220110 |
aggagagacacatcaaaagtcccaccacccaggtcaaagatgaaaatatttc |
28220161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 207
Target Start/End: Original strand, 28910650 - 28910765
Alignment:
| Q |
92 |
gtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagac |
191 |
Q |
| |
|
|||||||| ||| || ||||||| |||||| ||||||||||||||||||||| ||||| ||||||| ||||| | | | | |||||| |||||||| |
|
|
| T |
28910650 |
gtagttcaccatcctattatcaatgtcctcgaccccgaggtgagtgtttccagcggtggccttaacttggaagaccttatcctgaattgtaaggagagaa |
28910749 |
T |
|
| Q |
192 |
acatcaaaagtcccac |
207 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
28910750 |
acatcaaaagtcccac |
28910765 |
T |
|
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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 11133051 - 11133125
Alignment:
| Q |
81 |
tctttcacaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggcttta |
155 |
Q |
| |
|
|||||||| || | ||||| |||| ||||||||||||| | ||||||||||||||| | ||||| |||||||||| |
|
|
| T |
11133051 |
tctttcacgaaatggttcaccattgtgttatcaaagtcttgtcccccgaggtgagtatctccagcagtggcttta |
11133125 |
T |
|
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