View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2025_low_7 (Length: 250)
Name: NF2025_low_7
Description: NF2025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2025_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 4680739 - 4680970
Alignment:
| Q |
1 |
caaactcccgcaaagccggaaactgataaattgaaacatagagcattagattatgatcataatcatcatcaataccagaatcgtaacttgattcggatga |
100 |
Q |
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| T |
4680739 |
caaactcccgcaaagccggaaactgataaattgaaacattgagcattagattatgatcataatcatcatcaataccagaatcgtgacttgattcggatga |
4680838 |
T |
|
| Q |
101 |
tgatacaatcacaatgtttgcttataaaactacaataattatgtccgacactagaaacatactttacacatacatttagtgatatgaaacgtccaccata |
200 |
Q |
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||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4680839 |
tgatacaatcacaatgtttgcgtataaaactagaataattatgtccgacactagaaacatactttacacatacatttagtgatatgaaacgtccaccata |
4680938 |
T |
|
| Q |
201 |
atattcgactattttgtcatatatactgaaac |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
4680939 |
atattcgactattttgtcatatatactgaaac |
4680970 |
T |
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