View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20260_high_7 (Length: 304)
Name: NF20260_high_7
Description: NF20260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20260_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 16 - 292
Target Start/End: Complemental strand, 40327137 - 40326861
Alignment:
| Q |
16 |
caaacatgttatcatatagtatgtttttaattggagtttgggcacaaccacttgttttgtttttgcttttgttggtggtcgtgaattctgatttgaaatg |
115 |
Q |
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| T |
40327137 |
caaacatgttatcttatagtatgtttttaattggagtttgggcacaaccacttgttttgtttttgcttttgttggtggtcgtgaattctgatttgaaatg |
40327038 |
T |
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| Q |
116 |
tctgcacggaagttgcggttggtagaaaccaaaaccctcaaatcactcactacctatggccggaaaactgcatgaaatgacaaactaattaaacacttat |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40327037 |
tctgcacggaagttgcggttggtagaaaccaaaaccctcaaatcactcactacctatggccggaaaactgcatgaaatgacaaactaattaaacacttat |
40326938 |
T |
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| Q |
216 |
gtctaatcctcaatgcataatgtgtctctaaacaaaattcatgagtcacatctatacaaattaattacccttcccta |
292 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40326937 |
gtctaatcctcaatgcataatgtgtctctaaacaaaattcatgagtcacatctatacaaattaattacccttcccta |
40326861 |
T |
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